+F Repair protein KO
#
DNA Repair and Recombination Proteins - Solanum pennellii
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 107016276 DNA oxidative demethylase ALKBH2 isoform X1 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 107023087 DExH-box ATP-dependent RNA helicase DExH14 isoform X1 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 107026847 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 107008743 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107032385 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 107029692 adenine DNA glycosylase isoform X2 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107008783 methyl-CpG-binding domain protein 4-like protein isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 107004889 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 107029184 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107021495 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107012202 uncharacterized protein LOC107012202 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 107012604 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 107002797 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 107015118 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
F 107032134 nucleolar protein dao-5 K03504 POLD3; DNA polymerase delta subunit 3
F 107019852 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
F 107029494 uncharacterized protein LOC107029494 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 107004841 DNA polymerase epsilon catalytic subunit A-like isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 107012565 DNA polymerase epsilon subunit B isoform X1 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 107003250 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 107023890 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 107001612 flap endonuclease 1 isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 107005036 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 107021301 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 107012431 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 107031205 transcription factor bHLH140 isoform X2 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 107026395 polynucleotide 3'-phosphatase ZDP K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 107020345 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 107015088 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 107027814 LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107004468 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107027002 poly [ADP-ribose] polymerase 2-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 107016634 poly [ADP-ribose] polymerase 3-like K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 107003048 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 107012025 ubiquitin receptor RAD23c isoform X2 K10839 RAD23; UV excision repair protein RAD23
F 107017999 ubiquitin receptor RAD23c-like K10839 RAD23; UV excision repair protein RAD23
F 107015500 ubiquitin receptor RAD23b isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 107011483 ubiquitin receptor RAD23d isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 107021447 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107005489 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107011416 cullin-4-like K10609 CUL4; cullin 4
F 107011507 cullin-4 K10609 CUL4; cullin 4
F 107011170 DNA damage-binding protein 1 isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 107029211 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 107026730 uncharacterized protein LOC107026730 K15082 RAD7; DNA repair protein RAD7
F 107026264 uncharacterized protein LOC107026264 K15082 RAD7; DNA repair protein RAD7
F 107001711 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 107025231 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 107018510 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 107006318 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
F 107025465 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 107020828 DNA repair protein RAD16-like K15083 RAD16; DNA repair protein RAD16
F 107025229 ATP-dependent helicase rhp16-like K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 107010894 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 107011155 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 107006877 DNA-directed RNA polymerase II subunit RPB2-like K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 107020391 DNA-directed RNA polymerases II, IV and V subunit 3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 107015738 DNA-directed RNA polymerases IV and V subunit 4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 107021274 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 107013101 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107016042 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107018635 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107020153 DNA-directed RNA polymerases II and IV subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107007738 DNA-directed RNA polymerase V subunit 5A-like isoform X1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 107029241 DNA-directed RNA polymerases II and V subunit 6B-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 107021286 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 107009598 DNA-directed RNA polymerases II, IV and V subunit 8B-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107012482 DNA-directed RNA polymerases II and V subunit 8A-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 107019051 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 107021381 DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 107003164 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 107002287 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 107021447 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107005489 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 107011416 cullin-4-like K10609 CUL4; cullin 4
F 107011507 cullin-4 K10609 CUL4; cullin 4
F 107011170 DNA damage-binding protein 1 isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 107007238 WD repeat-containing protein ATCSA-1-like isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 107031360 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 107009654 UV-stimulated scaffold protein A homolog isoform X1 K23720 UVSSA; UV-stimulated scaffold protein A
F 107031897 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 107010358 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 107028896 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 107021320 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 107031834 general transcription and DNA repair factor IIH subunit TFB1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 107018273 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 107023808 general transcription and DNA repair factor IIH subunit TFB4 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 107011063 general transcription and DNA repair factor IIH subunit TFB2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 107027108 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 107026856 cyclin-dependent kinase D-3-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 107010098 cyclin-H1-1-like isoform X1 K06634 CCNH; cyclin H
E 107015849 cyclin-H1-1-like K06634 CCNH; cyclin H
E 107015850 uncharacterized protein LOC107015850 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 107028742 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 107020593 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107015417 replication protein A 70 kDa DNA-binding subunit B isoform X1 K07466 RFA1; replication factor A1
E 107024315 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 107002146 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 107029685 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 107001706 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Other NER factors
E 107012627 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 107026862 DNA repair endonuclease UVH1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 107011358 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 107005036 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 107012113 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 107008063 cullin-3A K03869 CUL3; cullin 3
E 107011441 cullin-3A-like K03869 CUL3; cullin 3
E 107021479 elongin-C K03872 ELOC; elongin-C
E 107020334 uncharacterized protein LOC107020334 isoform X1 K03873 ELOB; elongin-B
E 107026510 uncharacterized protein LOC107026510 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 107021249 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 107012166 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 107008263 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
E 107025913 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 107015696 DNA mismatch repair protein MLH1 isoform X1 K08734 MLH1; DNA mismatch repair protein MLH1
E 107031684 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 107010216 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 107002797 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 107015118 DNA polymerase delta small subunit K02328 POLD2; DNA polymerase delta subunit 2
E 107032134 nucleolar protein dao-5 K03504 POLD3; DNA polymerase delta subunit 3
E 107019852 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E 107029494 uncharacterized protein LOC107029494 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 107028742 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 107020593 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107015417 replication protein A 70 kDa DNA-binding subunit B isoform X1 K07466 RFA1; replication factor A1
E 107024315 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 107002146 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 107029685 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 107001706 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 107026067 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 107026904 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 107003057 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 107009736 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 107023633 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 107010141 uncharacterized protein LOC107010141 K10756 RFC3_5; replication factor C subunit 3/5
E 107020979 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 107008213 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 107024811 uncharacterized protein LOC107024811 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 107023890 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 107009082 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 107012887 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 107005036 DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 107009017 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 107029323 LOW QUALITY PROTEIN: double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107020535 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 107010959 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 107018841 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 107028944 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 107005400 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 107022026 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
E 107029828 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 107007036 uncharacterized protein LOC107007036 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 107015776 BRISC and BRCA1-A complex member 2 K12173 BRE; BRCA1-A complex subunit BRE
E 107023804 lys-63-specific deubiquitinase BRCC36-like isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 107002281 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 107021222 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 107008561 DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 107029323 LOW QUALITY PROTEIN: double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107020535 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 107010959 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 107008750 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 107024560 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 107024560 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 107003405 DNA repair protein RAD51 homolog 2 K10869 RAD51L1; RAD51-like protein 1
E 107019091 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 107003358 DNA repair protein RAD51 homolog 4 isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 107013080 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 107025473 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 107027202 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 107002936 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 107015963 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107023098 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107029094 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107030445 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107028951 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107008468 protein CHROMATIN REMODELING 35-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107027855 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107016915 SNF2 domain-containing protein CLASSY 4-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 107024544 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 107029016 mediator of RNA polymerase II transcription subunit 34 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 107012022 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 107008462 ATP-dependent DNA helicase Q-like SIM isoform X2 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 107020301 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107024232 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107018605 ATP-dependent DNA helicase Q-like 5 isoform X2 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 107020301 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107024232 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107031625 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107018792 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107005194 recQ-mediated genome instability protein 1-like K10990 RMI1; RecQ-mediated genome instability protein 1
E 107018706 recQ-mediated genome instability protein 1-like isoform X3 K10990 RMI1; RecQ-mediated genome instability protein 1
E 107003479 uncharacterized protein LOC107003479 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 107028742 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 107020593 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 107015417 replication protein A 70 kDa DNA-binding subunit B isoform X1 K07466 RFA1; replication factor A1
E 107024315 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 107002146 replication protein A 32 kDa subunit B-like K10739 RFA2; replication factor A2
E 107029685 replication protein A 14 kDa subunit B K10740 RPA3; replication factor A3
E 107001706 replication protein A 14 kDa subunit B-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 107023955 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 107012384 serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 107007336 serine/threonine-protein phosphatase 4 regulatory subunit 3 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 107007800 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 107002171 uncharacterized protein LOC107002171 K19022 AP5B1; AP-5 complex subunit beta-1
E 107008293 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 107031821 AP-5 complex subunit zeta-1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 107008071 structural maintenance of chromosomes protein 5 isoform X1 K22803 SMC5; structural maintenance of chromosomes protein 5
E 107020727 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 107015425 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 107024476 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 107007685 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 107032256 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 107016415 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 107015986 crossover junction endonuclease EME1B K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 107005575 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 107012354 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 107021701 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 107023309 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 107013028 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107029448 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 107009686 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 107012523 flap endonuclease GEN-like 2 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 107017581 uncharacterized protein LOC107017581 K19026 SPG11; spatacsin
E 107028374 uncharacterized protein LOC107028374 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 107011914 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 107015928 protein MRG1-like K11339 MORF4L1; mortality factor 4-like protein 1
E 107020775 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107010961 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 107008967 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 107003426 zinc finger SWIM domain-containing protein 7 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 107029527 Werner Syndrome-like exonuclease isoform X3 K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 107007624 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 107018579 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 107003061 single-stranded DNA-binding protein WHY2, mitochondrial isoform X1 K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 107029178 ATP-dependent DNA helicase 2 subunit KU70 isoform X1 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 107032578 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 107029323 LOW QUALITY PROTEIN: double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 107020535 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 107024819 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 114073826 DNA repair protein XRCC4 isoform X1 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 107020345 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 107031205 transcription factor bHLH140 isoform X2 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 107009074 uncharacterized protein LOC107009074 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 107013465 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 107012770 E3 ubiquitin-protein ligase FANCL K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 107005155 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 107024619 protein MHF1 homolog K11511 APITD1; centromere protein S
E 107015469 protein MHF2 homolog isoform X1 K15360 STRA13; centromere protein X
E 107024321 uncharacterized protein LOC107024321 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 107020301 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107024232 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 107031625 DNA topoisomerase 3-beta isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107018792 DNA topoisomerase 3-alpha isoform X1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 107005194 recQ-mediated genome instability protein 1-like K10990 RMI1; RecQ-mediated genome instability protein 1
E 107018706 recQ-mediated genome instability protein 1-like isoform X3 K10990 RMI1; RecQ-mediated genome instability protein 1
E 107003479 uncharacterized protein LOC107003479 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 107012651 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 107009518 Fanconi anemia group I protein isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 107008750 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 107002281 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 107031570 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 107024560 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 107019091 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 107002597 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 107028575 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 107006682 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 107014640 phytochrome-associated serine/threonine-protein phosphatase 3-like K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 107023687 phytochrome-associated serine/threonine-protein phosphatase 3 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 107004600 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 107010910 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 107023279 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 107009119 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 107023476 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 107009017 WD repeat-containing protein 76 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 107003688 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 107011472 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 107003420 DNA repair protein REV1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 107005212 LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 107008696 ubiquitin-conjugating enzyme E2 2-like isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107023242 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107011696 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107014753 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 107002900 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 107012600 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 107005588 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X2 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 107008372 ubiquitin-conjugating enzyme E2 variant 1D K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 107018181 ubiquitin-conjugating enzyme E2 variant 1B K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 107002702 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 107031902 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 107026413 ubiquitin-conjugating enzyme E2 35 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 107023890 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 107031851 cell cycle checkpoint control protein RAD9B K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 107015379 uncharacterized protein LOC107015379 K10903 HUS1; HUS1 checkpoint protein
D 107027230 uncharacterized protein LOC107027230 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 107011020 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 107026904 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 107003057 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 107009736 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 107023633 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 107010141 uncharacterized protein LOC107010141 K10756 RFC3_5; replication factor C subunit 3/5
D 107020979 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 107008213 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 107024811 uncharacterized protein LOC107024811 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 107027230 uncharacterized protein LOC107027230 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 107012189 protein timeless homolog K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 107018008 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 107002597 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 107007361 uncharacterized protein LOC107007361 K20403 TTI1; TELO2-interacting protein 1
D 107021439 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 107026648 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
D 107006972 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 107016704 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 107014410 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 107014815 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 107004827 14-3-3 protein 6 K06630 YWHAE; 14-3-3 protein epsilon
D 107006043 14-3-3 protein 2 K06630 YWHAE; 14-3-3 protein epsilon
D 107007068 14-3-3 protein 8 K06630 YWHAE; 14-3-3 protein epsilon
D 107017959 14-3-3 protein 5 K06630 YWHAE; 14-3-3 protein epsilon
D 107017964 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 107025833 14-3-3 protein 9 isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 107004713 14-3-3 protein 1 K06630 YWHAE; 14-3-3 protein epsilon
D 107011436 14-3-3 protein 4 K06630 YWHAE; 14-3-3 protein epsilon
D 107028440 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 107019872 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 107029703 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 107002178 uncharacterized protein LOC107002178 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 107002856 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107003403 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107012171 serine/threonine-protein kinase Nek6-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107005651 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107007830 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107002457 serine/threonine-protein kinase Nek6-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107029521 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 107008364 protein downstream neighbor of son homolog K22422 DONSON; protein downstream neighbor of Son
D 107004466 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107004469 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107004709 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 107007865 replication stress response regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 107004689 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 107028981 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 107007092 rDNA transcriptional regulator pol5 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 107005748 DNA-directed primase/polymerase protein isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 107004849 5' exonuclease Apollo isoform X1 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107026855 uncharacterized protein LOC107026855 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107008928 DNA cross-link repair protein SNM1 isoform X3 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 107024681 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 107003376 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 107005601 endonuclease V isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 107015331 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 107011877 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 107019995 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 107011878 endonuclease 4-like K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 107026250 switch 2 isoform X1 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 107031322 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 107017708 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 107008122 protein pleiotropic regulatory locus 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 107014042 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107018691 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107012767 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107010612 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107016371 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107017905 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 107015598 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 107008659 ribonucleoside-diphosphate reductase small chain A K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 107011918 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 107026847 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 107008743 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 107011951 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 107015801 DNA-3-methyladenine glycosylase 1 isoform X1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 107032385 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 107029692 adenine DNA glycosylase isoform X2 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 107005300 uncharacterized protein LOC107005300 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107002537 uncharacterized protein LOC107002537 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107011440 uncharacterized protein LOC107011440 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107015923 uncharacterized protein LOC107015923 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107017304 uncharacterized protein LOC107017304 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107015505 uncharacterized protein LOC107015505 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 107012220 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 107029184 endonuclease III homolog 1, chloroplastic-like isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107021495 endonuclease III homolog 1, chloroplastic-like K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 107012202 uncharacterized protein LOC107012202 isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 107015682 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 107025748 DNA polymerase I B, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 107025748 DNA polymerase I B, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 34925949 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 34925948 rpoC2; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 34925916 rpoC1; RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 34925873 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 107010946 uncharacterized protein LOC107010946 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 107005635 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 107025835 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 107018851 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 107025835 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 107018851 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
E 107014806 uncharacterized protein LOC107014806 K04485 radA; DNA repair protein RadA/Sms
E 107020606 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 107007794 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 107007298 DNA gyrase subunit B, chloroplastic/mitochondrial isoform X1 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 107031384 uncharacterized protein LOC107031384 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 107025835 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 107018851 DNA repair protein recA homolog 3, mitochondrial K03553 recA; recombination protein RecA
D 107005635 single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 107014042 nudix hydrolase 1-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107018691 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 107012767 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107010612 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 107016371 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024