+D GENES KO #

  KEGG Orthology (KO) - Sphingomonas paeninsulae

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:spha00010] D D3Y57_16700 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D D3Y57_01590 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D3Y57_11905 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D3Y57_06800 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D3Y57_18685 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_00105 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_06810 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D3Y57_06805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D3Y57_05865 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D3Y57_13305 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D D3Y57_16460 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D3Y57_05875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D3Y57_05880 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D3Y57_09120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_18095 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D D3Y57_18100 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_00160 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_00200 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_05330 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D D3Y57_00155 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D3Y57_18305 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:spha00020] D D3Y57_18630 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D D3Y57_11690 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D D3Y57_06025 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D3Y57_17505 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D D3Y57_17510 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_18095 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D D3Y57_18100 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D D3Y57_17500 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D3Y57_11875 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D3Y57_00260 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D D3Y57_17455 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D3Y57_17480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D3Y57_17445 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D3Y57_17450 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D3Y57_12785 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D D3Y57_10715 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D3Y57_18305 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D3Y57_05875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D3Y57_05880 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D3Y57_09120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:spha00030] D D3Y57_01590 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D3Y57_16710 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D3Y57_07365 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D3Y57_12210 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D D3Y57_07370 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D D3Y57_12165 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D3Y57_06815 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D3Y57_07375 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D3Y57_17395 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D D3Y57_00135 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D D3Y57_00140 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D3Y57_07355 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D3Y57_08350 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D D3Y57_11845 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D D3Y57_16705 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D D3Y57_14900 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D D3Y57_00375 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D D3Y57_01450 GMC family oxidoreductase K19813 gdh; glucose dehydrogenase [EC:1.1.5.9] D D3Y57_02055 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_03525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_04595 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_01915 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_02350 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_06800 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D3Y57_11905 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:spha00040] D D3Y57_08025 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D3Y57_11355 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D3Y57_19525 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D D3Y57_12165 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:spha00051] D D3Y57_00045 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D3Y57_16135 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D3Y57_14450 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D D3Y57_11905 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D3Y57_06800 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D3Y57_18685 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_00105 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_08350 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D D3Y57_18280 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:spha00052] D D3Y57_10305 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D3Y57_11355 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D3Y57_16700 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism [PATH:spha00053] D D3Y57_08025 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D3Y57_02055 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_03525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_04595 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_01915 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_02350 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_19525 class II aldolase/adducin family protein K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:spha00500] D D3Y57_11355 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D3Y57_04975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D3Y57_08720 glycosyltransferase, exosortase A system-associated K16150 K16150; glycogen synthase [EC:2.4.1.11] D D3Y57_08610 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D D3Y57_16700 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D D3Y57_01590 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:spha00520] D D3Y57_17315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D3Y57_07190 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D D3Y57_17310 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D D3Y57_05780 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D D3Y57_05630 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D D3Y57_13990 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D3Y57_15980 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D3Y57_07240 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D D3Y57_07245 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D D3Y57_16700 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D D3Y57_11355 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D3Y57_08025 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D3Y57_10305 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D3Y57_18280 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D D3Y57_01590 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D3Y57_00045 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D3Y57_16135 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D3Y57_14450 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] C 00620 Pyruvate metabolism [PATH:spha00620] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D3Y57_18095 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D D3Y57_18100 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D D3Y57_05875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D3Y57_05880 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D3Y57_09120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_15220 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D D3Y57_00160 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_00200 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_05330 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D D3Y57_00155 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D D3Y57_00080 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D3Y57_13305 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D D3Y57_18950 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D3Y57_16995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D3Y57_16990 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D3Y57_18780 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_00260 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D D3Y57_02625 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D D3Y57_02605 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D D3Y57_10445 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D D3Y57_13110 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D D3Y57_10440 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D D3Y57_11495 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D3Y57_12785 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D D3Y57_10715 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D D3Y57_18305 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D3Y57_16460 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_19760 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:spha00630] D D3Y57_09895 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D3Y57_18630 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D D3Y57_11690 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_09605 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D D3Y57_13805 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D D3Y57_03955 acyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12] D D3Y57_13785 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D D3Y57_13810 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D D3Y57_13800 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D D3Y57_14635 catalase K03781 katE; catalase [EC:1.11.1.6] D D3Y57_17305 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D D3Y57_10685 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D D3Y57_08675 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D3Y57_08355 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D3Y57_16550 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D D3Y57_16540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_16545 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D D3Y57_02550 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D D3Y57_02555 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D D3Y57_02570 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D D3Y57_13845 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D D3Y57_16085 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] C 00640 Propanoate metabolism [PATH:spha00640] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D3Y57_00080 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D3Y57_13700 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D3Y57_02665 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D3Y57_13705 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D D3Y57_13710 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D3Y57_02655 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_18950 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D3Y57_16995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D3Y57_16990 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D3Y57_18780 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D3Y57_13785 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D D3Y57_13810 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D D3Y57_13805 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D D3Y57_13800 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D D3Y57_11875 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D3Y57_17500 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D3Y57_01555 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00650 Butanoate metabolism [PATH:spha00650] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_02180 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_04420 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_10845 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_15545 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_15220 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D D3Y57_14015 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D D3Y57_13760 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D D3Y57_09605 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D D3Y57_15470 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D D3Y57_07780 hypothetical protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D D3Y57_17455 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D3Y57_17480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D3Y57_17445 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D3Y57_17450 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D3Y57_14875 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_00175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_00260 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D D3Y57_03405 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D D3Y57_18095 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D D3Y57_18100 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D D3Y57_03975 hydroxymethylglutaryl-CoA synthase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D D3Y57_02230 hydroxymethylglutaryl-CoA synthase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D D3Y57_07680 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D D3Y57_03815 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D D3Y57_17020 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D D3Y57_03820 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D D3Y57_17025 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D D3Y57_14430 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D D3Y57_00170 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D D3Y57_17945 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_17015 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19780 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19775 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D3Y57_19650 alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D D3Y57_15485 alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D D3Y57_15130 SDR family oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] D D3Y57_19670 SDR family oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:spha00660] D D3Y57_17945 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_17015 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19780 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19775 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D3Y57_11875 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D3Y57_17500 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D3Y57_07670 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_17040 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_07665 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_17050 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_09730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:spha00562] D D3Y57_12625 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D3Y57_06775 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D3Y57_02810 gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D D3Y57_01555 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D D3Y57_18685 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_00105 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:spha00190] D D3Y57_06760 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D D3Y57_06755 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D D3Y57_06750 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D D3Y57_06745 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D D3Y57_06740 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D D3Y57_06735 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D D3Y57_06730 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D D3Y57_06725 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D D3Y57_06720 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D D3Y57_06715 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D D3Y57_06710 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D D3Y57_06705 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D D3Y57_06700 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D D3Y57_17455 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D3Y57_17480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D3Y57_17445 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D3Y57_17450 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D3Y57_16405 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D D3Y57_16410 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D3Y57_16415 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D D3Y57_11470 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D3Y57_00335 cytochrome-c oxidase K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D D3Y57_11465 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D D3Y57_11460 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D D3Y57_11475 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D D3Y57_08485 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D3Y57_00330 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D D3Y57_00320 ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D D3Y57_09570 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D D3Y57_09565 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D D3Y57_13155 cytochrome c family protein K08738 CYC; cytochrome c D D3Y57_17215 cytochrome c family protein K08738 CYC; cytochrome c D D3Y57_17360 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D D3Y57_17350 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D D3Y57_17355 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D D3Y57_17365 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D D3Y57_17345 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D D3Y57_16260 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D D3Y57_16270 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D3Y57_16275 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D3Y57_16265 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D D3Y57_13440 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D D3Y57_18400 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D D3Y57_04950 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:spha00710] D D3Y57_06805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D3Y57_06810 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D3Y57_06800 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D3Y57_11905 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D3Y57_06815 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D3Y57_07375 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D3Y57_00140 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D3Y57_07355 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D D3Y57_08350 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D D3Y57_18685 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_00105 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_12165 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D D3Y57_17395 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D D3Y57_00135 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D D3Y57_18305 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D D3Y57_16460 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D3Y57_11495 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:spha00720] D D3Y57_16460 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D3Y57_12785 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D D3Y57_10715 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D D3Y57_17455 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D D3Y57_17480 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D D3Y57_17445 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D D3Y57_17450 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D D3Y57_17500 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D D3Y57_11875 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D D3Y57_03405 4-hydroxybutyryl-CoA dehydratase K14534 abfD; 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_18095 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D D3Y57_18100 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D D3Y57_06025 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D3Y57_11690 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D D3Y57_18950 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D3Y57_16995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D3Y57_16990 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D3Y57_18780 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D3Y57_03960 carnitine dehydratase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3] D D3Y57_02040 hypothetical protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] D D3Y57_02185 acyl-CoA dehydrogenase K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] D D3Y57_03950 hypothetical protein K09709 meh; 3-methylfumaryl-CoA hydratase [EC:4.2.1.153] D D3Y57_13805 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D D3Y57_13800 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D D3Y57_11120 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D D3Y57_17570 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D D3Y57_00080 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:spha00680] D D3Y57_02580 gfa; S-(hydroxymethyl)glutathione synthase K03396 gfa; S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_02575 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D D3Y57_08455 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D D3Y57_02555 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D D3Y57_02570 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D D3Y57_02550 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D D3Y57_08355 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D3Y57_05865 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D3Y57_06800 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D D3Y57_11905 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D D3Y57_00080 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D3Y57_13135 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D3Y57_13140 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D3Y57_19790 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:spha00910] D D3Y57_00640 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D D3Y57_03605 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D D3Y57_04395 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D D3Y57_13680 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D3Y57_08955 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D D3Y57_08675 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D3Y57_12855 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D3Y57_12865 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D3Y57_14940 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D D3Y57_06385 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D D3Y57_00520 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:spha00920] D D3Y57_19545 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D D3Y57_07525 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D D3Y57_19550 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_19555 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_07520 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_19560 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D D3Y57_07515 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D D3Y57_19570 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D D3Y57_19575 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D D3Y57_07545 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D D3Y57_08460 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D D3Y57_04570 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_11200 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_04565 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_11195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_04575 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D D3Y57_11205 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D D3Y57_16625 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D D3Y57_16635 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D D3Y57_12655 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D3Y57_08150 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D3Y57_17245 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D3Y57_18715 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D D3Y57_15915 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D D3Y57_12510 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D D3Y57_07260 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D D3Y57_18145 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:spha00061] D D3Y57_18950 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D D3Y57_16995 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D D3Y57_16990 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D D3Y57_18780 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D D3Y57_18820 acyl carrier protein K02078 acpP; acyl carrier protein D D3Y57_18175 acyl carrier protein K02078 acpP; acyl carrier protein D D3Y57_09260 acyl carrier protein K02078 acpP; acyl carrier protein D D3Y57_01280 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D3Y57_13090 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D3Y57_18825 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D3Y57_03450 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_09505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_05130 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15320 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15350 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_17435 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_06090 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D3Y57_10535 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D3Y57_11730 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D D3Y57_03915 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_04305 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_05225 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_01955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:spha00071] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_02180 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_04420 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_10845 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_15545 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_10820 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_15115 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_01155 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_01905 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_02300 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_02310 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03515 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03925 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03995 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_04480 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03370 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D D3Y57_13685 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D D3Y57_03915 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_04305 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_05225 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_01955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_06150 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D D3Y57_02545 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D D3Y57_14870 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_00160 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_00200 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:spha00100] D D3Y57_11060 fatty acid hydroxylase family protein K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:spha00121] D D3Y57_09485 SDR family oxidoreductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:spha00561] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_05330 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D D3Y57_00155 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D D3Y57_16580 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D D3Y57_13095 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D D3Y57_08320 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D3Y57_12495 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D D3Y57_03395 DUF1298 domain-containing protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D D3Y57_07945 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:spha00564] D D3Y57_12185 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D D3Y57_16575 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D D3Y57_08320 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D3Y57_12495 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D D3Y57_16505 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5] D D3Y57_10235 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D D3Y57_06150 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D D3Y57_19345 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D D3Y57_06065 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D D3Y57_06035 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D D3Y57_06030 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D D3Y57_17225 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D D3Y57_06110 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D D3Y57_08340 DUF3419 family protein K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase D D3Y57_08335 methyltransferase domain-containing protein K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D D3Y57_13865 hopanoid biosynthesis associated glycosyl transferase HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:spha01040] D D3Y57_10210 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D D3Y57_03460 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D D3Y57_03445 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D D3Y57_13475 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:spha00230] D D3Y57_14525 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D D3Y57_11845 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D D3Y57_13235 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D D3Y57_18380 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D D3Y57_08845 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D D3Y57_15880 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D D3Y57_15875 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D3Y57_13340 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D D3Y57_13335 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D D3Y57_15900 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D D3Y57_16225 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D D3Y57_12155 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D3Y57_16420 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D D3Y57_09635 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D D3Y57_18335 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D D3Y57_18375 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D3Y57_16175 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D D3Y57_07320 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] D D3Y57_07315 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] D D3Y57_07310 aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit D D3Y57_08160 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D3Y57_10705 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D D3Y57_12780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D3Y57_12770 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D D3Y57_16020 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D D3Y57_11380 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D D3Y57_18405 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D D3Y57_10145 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D D3Y57_17980 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D D3Y57_13120 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D3Y57_05605 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D D3Y57_08960 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D3Y57_06320 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D3Y57_17910 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D D3Y57_04570 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_11200 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_04565 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_11195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_00430 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 00240 Pyrimidine metabolism [PATH:spha00240] D D3Y57_05825 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D3Y57_05820 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D3Y57_19825 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D D3Y57_10995 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D D3Y57_19820 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D D3Y57_10420 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D D3Y57_11455 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D D3Y57_18800 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D D3Y57_06050 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D D3Y57_18375 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D3Y57_06320 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D3Y57_12350 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D D3Y57_13965 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D D3Y57_18695 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D D3Y57_17150 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D D3Y57_16605 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D D3Y57_16565 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D D3Y57_12780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D3Y57_12770 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D D3Y57_08300 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D D3Y57_14590 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D D3Y57_13050 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D D3Y57_09970 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:spha00250] D D3Y57_11835 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D D3Y57_13410 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D D3Y57_18240 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D3Y57_01860 asparagine synthetase B family protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D3Y57_06395 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D D3Y57_11155 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D D3Y57_10585 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D D3Y57_13120 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D D3Y57_16225 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D D3Y57_19825 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D D3Y57_14875 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_00175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_12855 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D3Y57_12865 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D D3Y57_13680 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D3Y57_08955 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D D3Y57_15055 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D D3Y57_08675 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D3Y57_05825 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D3Y57_05820 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D3Y57_08830 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D3Y57_15875 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D3Y57_17315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:spha00260] D D3Y57_11725 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D3Y57_06535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D3Y57_11900 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D D3Y57_16525 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D D3Y57_10265 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D D3Y57_09430 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D D3Y57_08355 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D3Y57_13135 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D3Y57_13140 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D3Y57_19790 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D D3Y57_08330 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D D3Y57_16550 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D D3Y57_16540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_16545 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D D3Y57_06035 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D D3Y57_18785 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D D3Y57_18790 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:spha00270] D D3Y57_08150 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D3Y57_17245 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D3Y57_18715 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D D3Y57_15915 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D D3Y57_12650 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D D3Y57_17575 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_17580 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_14640 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D D3Y57_16870 purine phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D D3Y57_13900 phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D D3Y57_09635 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D D3Y57_09640 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D D3Y57_09140 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D D3Y57_03850 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_05615 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D D3Y57_11725 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D3Y57_06535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D3Y57_11900 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D D3Y57_12510 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D D3Y57_08205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D3Y57_12600 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D D3Y57_16145 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D3Y57_12655 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D3Y57_17495 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D D3Y57_13135 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D3Y57_13140 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:spha00280] D D3Y57_08205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D3Y57_02645 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D D3Y57_06430 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D D3Y57_13700 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D3Y57_02665 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D3Y57_13705 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D D3Y57_13710 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D3Y57_02655 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_10820 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_15115 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_01155 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_01905 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_02300 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_02310 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03515 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03925 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_03995 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_04480 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D D3Y57_07385 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_13785 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3] D D3Y57_13810 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15] D D3Y57_13805 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D D3Y57_13800 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D D3Y57_17615 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D D3Y57_01540 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D D3Y57_04460 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D D3Y57_01555 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_07395 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D D3Y57_07680 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D D3Y57_03815 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D D3Y57_17020 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D D3Y57_03820 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D D3Y57_17025 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03975 hydroxymethylglutaryl-CoA synthase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D D3Y57_02230 hydroxymethylglutaryl-CoA synthase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:spha00290] D D3Y57_07670 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_17040 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_07665 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_17050 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D D3Y57_09730 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D D3Y57_17945 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_17015 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19780 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19775 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D3Y57_19770 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D D3Y57_18475 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D D3Y57_08205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D3Y57_02645 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D D3Y57_06430 Glu/Leu/Phe/Val dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D D3Y57_19760 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:spha00300] D D3Y57_11900 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D D3Y57_11725 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D3Y57_06535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D3Y57_05980 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D D3Y57_01630 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D D3Y57_10360 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D D3Y57_16340 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D3Y57_06585 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D D3Y57_18190 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D3Y57_10590 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D3Y57_01395 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D3Y57_15945 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D3Y57_15950 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:spha00310] D D3Y57_17510 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_13685 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_14875 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_00175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_07335 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:spha00220] D D3Y57_16345 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D D3Y57_11155 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D D3Y57_10585 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D D3Y57_08830 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D3Y57_15875 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D3Y57_08675 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D3Y57_05825 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D D3Y57_05820 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D D3Y57_13680 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D3Y57_08955 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D D3Y57_05660 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D D3Y57_11110 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D D3Y57_18845 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D D3Y57_16340 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:spha00330] D D3Y57_08385 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12] D D3Y57_08390 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D D3Y57_18500 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_09490 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D3Y57_18065 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D D3Y57_18060 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D D3Y57_16650 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D D3Y57_15055 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D D3Y57_09245 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D D3Y57_11760 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D D3Y57_11510 oxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] C 00340 Histidine metabolism [PATH:spha00340] D D3Y57_11565 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D D3Y57_13130 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D D3Y57_10745 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D D3Y57_18130 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D D3Y57_10735 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D D3Y57_10730 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D D3Y57_10740 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D D3Y57_10725 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D D3Y57_12505 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D D3Y57_12550 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D D3Y57_11560 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D D3Y57_16080 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D D3Y57_16090 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D D3Y57_16075 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D D3Y57_16085 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:spha00350] D D3Y57_12505 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D D3Y57_09725 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D D3Y57_09715 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_00160 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_00200 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_14875 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_00175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:spha00360] D D3Y57_17425 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D D3Y57_05240 phenylacetate--CoA ligase family protein K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D D3Y57_03560 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D D3Y57_03940 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D D3Y57_05340 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_12505 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D D3Y57_09725 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D D3Y57_09490 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D3Y57_02545 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D D3Y57_14870 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D D3Y57_03745 alpha/beta hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D D3Y57_15225 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D D3Y57_15220 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:spha00380] D D3Y57_17510 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_13685 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_09490 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D3Y57_14635 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:spha00400] D D3Y57_17885 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D3Y57_18930 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D D3Y57_17000 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D D3Y57_12355 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D D3Y57_18935 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D D3Y57_05600 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D D3Y57_10530 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D D3Y57_18675 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D D3Y57_18670 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D D3Y57_18795 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D D3Y57_18660 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D D3Y57_18785 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D D3Y57_18790 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D D3Y57_14505 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D D3Y57_12500 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D D3Y57_13160 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D D3Y57_12505 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D D3Y57_17425 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:spha00410] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_10045 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_01555 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:spha00430] D D3Y57_06395 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D D3Y57_13680 glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D D3Y57_00080 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:spha00450] D D3Y57_12650 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D D3Y57_17575 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_17580 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_09640 cystathionine gamma-synthase family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11] D D3Y57_10385 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D D3Y57_01145 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D D3Y57_18160 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D D3Y57_04570 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_11200 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_04565 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_11195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_06310 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:spha00460] D D3Y57_04975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D D3Y57_13410 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D D3Y57_08355 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:spha00470] D D3Y57_08830 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D3Y57_15875 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D D3Y57_15960 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D3Y57_06585 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D D3Y57_18190 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D3Y57_10590 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D3Y57_01395 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D D3Y57_16510 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] C 00480 Glutathione metabolism [PATH:spha00480] D D3Y57_12600 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D D3Y57_16145 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D D3Y57_18370 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D3Y57_18860 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D3Y57_09410 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D D3Y57_07835 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_07955 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_08000 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_05655 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_02685 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_14070 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_03885 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_12850 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_10625 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_08175 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_01585 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D D3Y57_06025 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D D3Y57_07370 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D D3Y57_16710 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D3Y57_07365 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D3Y57_13675 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D D3Y57_18420 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D D3Y57_05610 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D D3Y57_18500 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:spha00540] D D3Y57_07300 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D D3Y57_07275 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D D3Y57_07270 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D D3Y57_15785 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D D3Y57_15780 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D D3Y57_15770 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D D3Y57_15775 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:spha00541] D D3Y57_11355 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D D3Y57_10305 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D D3Y57_08025 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D D3Y57_09900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D3Y57_09915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D D3Y57_09905 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D D3Y57_00045 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D3Y57_16135 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D D3Y57_14450 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D D3Y57_17310 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D D3Y57_07240 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D D3Y57_07245 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 00550 Peptidoglycan biosynthesis [PATH:spha00550] D D3Y57_13990 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D3Y57_15980 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D3Y57_10470 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D3Y57_15975 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D3Y57_15960 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D3Y57_15945 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D3Y57_15950 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D D3Y57_06060 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D D3Y57_15970 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D D3Y57_18550 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D D3Y57_12420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_09595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_11910 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_12560 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D D3Y57_19725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D D3Y57_15940 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D3Y57_06295 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:spha00543] D D3Y57_08150 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D3Y57_17245 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D D3Y57_14700 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D D3Y57_14695 hypothetical protein K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-] D D3Y57_14675 glycosyltransferase family 2 protein K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-] D D3Y57_14690 glycosyltransferase family 2 protein K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:spha00730] D D3Y57_11075 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D D3Y57_07180 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D D3Y57_18520 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_18525 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_08245 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D D3Y57_17005 thiS; sulfur carrier protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10] D D3Y57_12270 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D D3Y57_06795 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D D3Y57_13985 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D D3Y57_02920 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D D3Y57_08960 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:spha00740] D D3Y57_12255 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D D3Y57_09445 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D D3Y57_09440 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D D3Y57_11360 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D D3Y57_10480 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D D3Y57_05695 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D D3Y57_06190 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D D3Y57_08460 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D D3Y57_03040 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D D3Y57_14525 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:spha00750] D D3Y57_10560 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D D3Y57_03165 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D D3Y57_13140 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D D3Y57_18355 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D D3Y57_11450 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D D3Y57_10265 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:spha00760] D D3Y57_11835 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D D3Y57_17085 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D D3Y57_17100 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D D3Y57_11765 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D D3Y57_06320 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D3Y57_13165 NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D D3Y57_12140 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D D3Y57_06370 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D D3Y57_00180 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D D3Y57_00185 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D D3Y57_07145 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D D3Y57_07150 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D D3Y57_00190 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D D3Y57_07140 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D D3Y57_07685 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107] D D3Y57_07780 hypothetical protein K01799 nicE; maleate isomerase [EC:5.2.1.1] D D3Y57_14875 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D D3Y57_00175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:spha00770] D D3Y57_17945 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_17015 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19780 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D D3Y57_19775 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D D3Y57_19770 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D D3Y57_18475 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D D3Y57_08880 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D D3Y57_10045 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D D3Y57_06690 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D D3Y57_08295 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D D3Y57_06320 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D D3Y57_07915 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D D3Y57_12360 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D D3Y57_11445 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D D3Y57_08205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:spha00780] D D3Y57_18825 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D3Y57_03450 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_09505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_05130 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15320 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15350 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_17435 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_06090 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D3Y57_10535 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D3Y57_12100 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D D3Y57_09265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D D3Y57_12095 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D D3Y57_13790 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D D3Y57_06695 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:spha00785] D D3Y57_16380 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D D3Y57_06380 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D D3Y57_03705 hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_05875 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D D3Y57_05880 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D D3Y57_09120 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D D3Y57_17505 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D D3Y57_17510 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D D3Y57_13700 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D3Y57_02665 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D D3Y57_13705 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D D3Y57_13710 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D3Y57_02655 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D D3Y57_16550 aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D D3Y57_16540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D3Y57_16545 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:spha00790] D D3Y57_02095 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D D3Y57_01300 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D D3Y57_11385 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D D3Y57_07165 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D D3Y57_13045 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D D3Y57_18775 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D D3Y57_12255 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D D3Y57_09445 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D D3Y57_12125 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D D3Y57_10285 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D D3Y57_17425 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D D3Y57_16365 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D D3Y57_16360 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D D3Y57_12660 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D D3Y57_05745 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D D3Y57_18655 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D D3Y57_17235 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D D3Y57_18445 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D D3Y57_18650 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D D3Y57_07325 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D D3Y57_13590 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:spha00670] D D3Y57_13045 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D D3Y57_11120 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D D3Y57_08355 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D D3Y57_18380 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D D3Y57_12155 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D3Y57_16540 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D D3Y57_17575 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_17580 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_13050 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D D3Y57_13845 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D D3Y57_17570 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D D3Y57_06830 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:spha00860] D D3Y57_08330 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D D3Y57_18635 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_12135 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_18030 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D D3Y57_12195 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D D3Y57_12200 uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D D3Y57_12340 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D D3Y57_16395 oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D D3Y57_12335 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D D3Y57_10600 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D D3Y57_16645 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D D3Y57_11470 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D3Y57_08485 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D3Y57_03085 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D D3Y57_03095 cobalamin biosynthesis protein CobG K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D D3Y57_03080 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D D3Y57_03060 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D D3Y57_03065 precorrin methylase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D D3Y57_03050 precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D D3Y57_03075 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D D3Y57_03070 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D D3Y57_03090 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D D3Y57_03055 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D D3Y57_03100 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D D3Y57_11615 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D D3Y57_11620 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D D3Y57_10640 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D D3Y57_03045 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D D3Y57_03005 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D D3Y57_03010 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D D3Y57_03015 pyridoxal phosphate-dependent class II aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC D D3Y57_03000 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D D3Y57_03020 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D D3Y57_03030 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D D3Y57_03025 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D D3Y57_08855 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:spha00130] D D3Y57_12615 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D D3Y57_11720 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D D3Y57_12235 FAD-dependent oxidoreductase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D D3Y57_08285 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D D3Y57_13210 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D D3Y57_00215 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D D3Y57_09155 NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D D3Y57_09725 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:spha00900] D D3Y57_08245 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D D3Y57_06070 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D D3Y57_06360 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D D3Y57_18470 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D D3Y57_13420 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D D3Y57_16530 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03975 hydroxymethylglutaryl-CoA synthase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D D3Y57_02230 hydroxymethylglutaryl-CoA synthase family protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D D3Y57_07920 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D D3Y57_14510 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D D3Y57_06060 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:spha00909] D D3Y57_13895 shc; squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:spha00906] D D3Y57_05890 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D D3Y57_11030 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D D3Y57_11040 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D D3Y57_11045 crtY; lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19] D D3Y57_11885 beta-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:spha00903] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_19625 LLM class flavin-dependent oxidoreductase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107] C 00907 Pinene, camphor and geraniol degradation [PATH:spha00907] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_07680 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D D3Y57_06815 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D D3Y57_07375 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:spha00523] D D3Y57_09900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D3Y57_09915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D D3Y57_09905 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D D3Y57_08370 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics [PATH:spha01055] D D3Y57_07445 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D D3Y57_09915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:spha00946] D D3Y57_04975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D D3Y57_13415 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D D3Y57_14845 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:spha00332] D D3Y57_09245 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D D3Y57_11760 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:spha00261] D D3Y57_07445 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D D3Y57_04570 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_11200 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D D3Y57_04565 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_11195 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D D3Y57_11725 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D D3Y57_06535 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D D3Y57_05980 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D D3Y57_01630 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:spha00521] D D3Y57_16700 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D D3Y57_12625 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D3Y57_06775 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D D3Y57_02810 gfo/Idh/MocA family oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D D3Y57_09900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D3Y57_09915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D D3Y57_09905 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D D3Y57_16700 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:spha00525] D D3Y57_09900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D D3Y57_09915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:spha00401] D D3Y57_12500 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D D3Y57_12505 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D D3Y57_18675 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D D3Y57_18670 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D D3Y57_01280 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D3Y57_03450 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_09505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_05130 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15320 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15350 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_17435 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_10535 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D D3Y57_18820 acyl carrier protein K02078 acpP; acyl carrier protein D D3Y57_18175 acyl carrier protein K02078 acpP; acyl carrier protein D D3Y57_09260 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:spha00999] D D3Y57_14640 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D D3Y57_12355 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D D3Y57_04975 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:spha00362] D D3Y57_15215 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D D3Y57_15225 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D D3Y57_15220 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D D3Y57_04465 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D D3Y57_02545 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D D3Y57_14870 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D D3Y57_12110 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D D3Y57_03270 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D D3Y57_03695 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D D3Y57_02030 SDR family oxidoreductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D D3Y57_02060 SDR family oxidoreductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D D3Y57_02180 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_04420 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_10845 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_15545 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D D3Y57_13685 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:spha00627] D D3Y57_05685 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D D3Y57_09490 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:spha00364] D D3Y57_07995 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D D3Y57_17370 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:spha00625] D D3Y57_15145 alpha/beta fold hydrolase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D D3Y57_00160 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_00200 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_03265 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_04450 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_08680 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D D3Y57_15080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:spha00361] D D3Y57_15145 alpha/beta fold hydrolase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D D3Y57_07995 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D D3Y57_17370 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:spha00623] D D3Y57_07995 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D D3Y57_17370 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:spha00622] D D3Y57_15215 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D D3Y57_15225 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D D3Y57_15220 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:spha00633] D D3Y57_00205 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D D3Y57_10525 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:spha00643] D D3Y57_09715 FAA hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D D3Y57_09490 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D D3Y57_15470 ketoacid CoA transferase K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation C 00930 Caprolactam degradation [PATH:spha00930] D D3Y57_02055 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_03525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_04595 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_01915 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_02350 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_03965 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D D3Y57_08170 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:spha00621] D D3Y57_15215 2-oxopent-4-enoate hydratase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D D3Y57_15225 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D D3Y57_15220 acetaldehyde dehydrogenase (acetylating) K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:spha00626] D D3Y57_00160 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_00200 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D D3Y57_02585 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_14825 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D D3Y57_10825 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:spha00984] D D3Y57_03675 FAD-binding protein K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D D3Y57_15260 FAD-dependent oxidoreductase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D D3Y57_15525 (2Fe-2S)-binding protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D D3Y57_15205 flavin-dependent monooxygenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D D3Y57_15480 glyoxalase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D D3Y57_15210 alpha/beta fold hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D D3Y57_15520 fatty acid--CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D D3Y57_18050 SDR family oxidoreductase K05296 E1.1.1.51; 3(or 17)beta-hydroxysteroid dehydrogenase [EC:1.1.1.51] D D3Y57_15405 steroid delta-isomerase K01822 E5.3.3.1; steroid Delta-isomerase [EC:5.3.3.1] D D3Y57_03785 FAD-binding protein K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5] D D3Y57_15195 FAD-binding protein K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:spha03020] D D3Y57_16860 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D3Y57_08940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D3Y57_12745 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:spha03010] D D3Y57_17145 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D D3Y57_06040 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D D3Y57_09035 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D D3Y57_08375 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D D3Y57_08980 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D D3Y57_01285 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D D3Y57_09085 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D D3Y57_08995 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D D3Y57_08515 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D D3Y57_09070 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D D3Y57_08945 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D D3Y57_09090 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D D3Y57_08950 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D D3Y57_09000 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D D3Y57_14575 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D D3Y57_06570 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D D3Y57_09020 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D D3Y57_01290 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D D3Y57_09045 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D D3Y57_08275 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D D3Y57_12020 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D3Y57_11410 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D3Y57_16915 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D D3Y57_09065 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D D3Y57_09060 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D D3Y57_09005 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D D3Y57_08990 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D D3Y57_16895 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D D3Y57_01295 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D D3Y57_16900 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D D3Y57_16920 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D D3Y57_08510 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D D3Y57_09015 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D D3Y57_08970 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D D3Y57_09030 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D D3Y57_08935 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D D3Y57_08985 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D D3Y57_06545 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D D3Y57_12535 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D D3Y57_09210 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D D3Y57_09040 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D D3Y57_09055 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D D3Y57_09010 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D D3Y57_16440 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D D3Y57_09215 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D D3Y57_11635 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D D3Y57_09025 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D D3Y57_08975 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D D3Y57_06095 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D D3Y57_13100 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D D3Y57_10005 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D D3Y57_07810 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D D3Y57_12540 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D D3Y57_13310 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D D3Y57_01260 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D3Y57_01245 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D3Y57_13510 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D3Y57_13515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:spha00970] D D3Y57_14400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_13505 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_01250 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_17170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_19340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_18045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_15865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_01645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_05735 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D3Y57_06840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D3Y57_18000 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D3Y57_10150 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D3Y57_08200 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D3Y57_11930 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D3Y57_17860 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D3Y57_12815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D3Y57_08545 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D3Y57_12220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D3Y57_06435 tRNA-His K14226 tRNA-His; tRNA His D D3Y57_13500 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D3Y57_01255 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D3Y57_05575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_12880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_12465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_17135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_07795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_19715 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D3Y57_08405 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D3Y57_01235 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_05935 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_18155 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_13520 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_13950 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D3Y57_10925 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D3Y57_16100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D3Y57_05940 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D3Y57_06280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_17635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_10250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_11005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_16820 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D3Y57_11275 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D3Y57_09520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D3Y57_16935 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D3Y57_12835 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D3Y57_06880 tRNA-Val K14237 tRNA-Val; tRNA Val D D3Y57_06505 tRNA-Val K14237 tRNA-Val; tRNA Val D D3Y57_09770 tRNA-Val K14237 tRNA-Val; tRNA Val D D3Y57_18635 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_12135 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_19870 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D D3Y57_19860 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D D3Y57_06015 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D3Y57_18415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D3Y57_16450 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D3Y57_16455 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D3Y57_11015 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D3Y57_18870 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D3Y57_17950 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D3Y57_06310 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D3Y57_18020 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D3Y57_12285 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D3Y57_12630 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D3Y57_13055 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D D3Y57_09405 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D3Y57_16590 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D3Y57_13455 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D3Y57_12530 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D3Y57_12525 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D3Y57_05775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D3Y57_07875 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:spha03060] D D3Y57_08965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D3Y57_16930 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D3Y57_18690 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D3Y57_16110 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D3Y57_16115 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D3Y57_16105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D3Y57_07825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D3Y57_05675 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D3Y57_07865 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D3Y57_06575 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D3Y57_18535 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D D3Y57_06595 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D3Y57_09380 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D D3Y57_09375 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D3Y57_09370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D D3Y57_11440 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D3Y57_01600 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:spha04122] D D3Y57_18520 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_18525 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_12655 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D D3Y57_10355 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D D3Y57_17235 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D D3Y57_05745 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D D3Y57_17230 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D D3Y57_08305 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D D3Y57_18655 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D D3Y57_18445 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:spha03018] D D3Y57_12800 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D D3Y57_05865 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D3Y57_14570 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D3Y57_09980 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D3Y57_16570 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D3Y57_11780 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D3Y57_12330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D D3Y57_06685 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D D3Y57_16215 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D3Y57_17550 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D3Y57_06330 RNA chaperone Hfq K03666 hfq; host factor-I protein D D3Y57_18400 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D D3Y57_04950 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D D3Y57_08810 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:spha03030] D D3Y57_12365 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D3Y57_18540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_14330 AAA family ATPase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_06305 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D3Y57_12295 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D3Y57_10075 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D3Y57_16620 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D D3Y57_14270 virulence-associated protein E K02316 dnaG; DNA primase [EC:2.7.7.101] D D3Y57_00925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10485 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_00740 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_16520 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D3Y57_14920 reverse transcriptase-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D3Y57_07175 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D D3Y57_12145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D3Y57_17420 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:spha03410] D D3Y57_01635 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D D3Y57_13170 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D D3Y57_08280 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D D3Y57_12105 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D D3Y57_08395 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D3Y57_18455 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D3Y57_12250 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D3Y57_09320 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D3Y57_12145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D3Y57_17420 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:spha03420] D D3Y57_05755 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D D3Y57_12740 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D D3Y57_13840 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D D3Y57_16285 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D D3Y57_18730 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D3Y57_12145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D3Y57_17420 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:spha03430] D D3Y57_11500 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D D3Y57_18730 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D3Y57_13240 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D D3Y57_07925 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D D3Y57_00925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10485 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_00740 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10075 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D3Y57_18540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_14330 AAA family ATPase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_12295 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D3Y57_06305 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D3Y57_12365 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D3Y57_17420 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:spha03440] D D3Y57_00925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10485 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_00740 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_16305 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D D3Y57_18255 recR; recombination protein RecR K06187 recR; recombination protein RecR D D3Y57_06005 recA; recombinase RecA K03553 recA; recombination protein RecA D D3Y57_12145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D3Y57_13360 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D D3Y57_13370 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D D3Y57_13355 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D3Y57_10075 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D3Y57_18540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_14330 AAA family ATPase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_12295 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D3Y57_06305 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D3Y57_12365 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining [PATH:spha03450] D D3Y57_14885 Ku protein K10979 ku; DNA end-binding protein Ku D D3Y57_14880 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:spha02010] D D3Y57_19545 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D D3Y57_07525 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D D3Y57_19550 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_19555 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_07520 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_19560 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D D3Y57_07515 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D D3Y57_10300 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D D3Y57_10295 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D D3Y57_13915 hopanoid biosynthesis protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein D D3Y57_09660 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D D3Y57_09650 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D D3Y57_09655 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D D3Y57_14980 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D D3Y57_14975 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D D3Y57_14970 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D3Y57_14965 ATP-binding cassette domain-containing protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D3Y57_15750 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D D3Y57_15755 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D D3Y57_15760 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D D3Y57_18705 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D D3Y57_18710 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D D3Y57_06425 heme ABC transporter permease K02195 ccmC; heme exporter protein C D D3Y57_10275 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B D D3Y57_10280 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D D3Y57_09290 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D D3Y57_09295 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D D3Y57_09695 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D D3Y57_12485 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D D3Y57_12480 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D3Y57_11660 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter C 02060 Phosphotransferase system (PTS) [PATH:spha02060] D D3Y57_18275 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D D3Y57_18280 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D D3Y57_11735 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D D3Y57_12375 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:spha03070] D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein D D3Y57_06485 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D D3Y57_06490 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C D D3Y57_06470 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D D3Y57_06465 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D D3Y57_06460 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D D3Y57_06455 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D D3Y57_06450 hypothetical protein K02461 gspL; general secretion pathway protein L D D3Y57_06445 type II secretion system protein M K02462 gspM; general secretion pathway protein M D D3Y57_16110 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D3Y57_16115 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D3Y57_16930 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D3Y57_18690 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D3Y57_08965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D3Y57_16105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D3Y57_07825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D3Y57_05675 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D3Y57_06595 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D3Y57_07865 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D3Y57_06575 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D3Y57_09380 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D D3Y57_09375 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D3Y57_09370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D D3Y57_00760 type VI secretion protein K03194 virB1; type IV secretion system protein VirB1 D D3Y57_00770 hypothetical protein K03197 virB2; type IV secretion system protein VirB2 D D3Y57_00775 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3 D D3Y57_00785 type VI secretion protein K03200 virB5; type IV secretion system protein VirB5 D D3Y57_00805 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9 D D3Y57_00795 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D D3Y57_00800 conjugal transfer protein TraJ K03203 virB8; type IV secretion system protein VirB8 D D3Y57_00810 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10 D D3Y57_00780 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D3Y57_01720 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D3Y57_00820 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D3Y57_08085 FHA domain-containing protein K11913 fha1; type VI secretion system protein B B 09132 Signal transduction C 02020 Two-component system [PATH:spha02020] D D3Y57_17275 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D D3Y57_17265 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D D3Y57_11385 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D D3Y57_14980 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D D3Y57_05695 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D D3Y57_06190 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D D3Y57_12680 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D3Y57_14205 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D D3Y57_07585 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D D3Y57_07590 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump D D3Y57_04155 flagellin FliC K02406 fliC; flagellin D D3Y57_04150 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D D3Y57_04045 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D3Y57_13535 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_08120 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_04275 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_13540 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_08125 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_04270 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_08105 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D D3Y57_08110 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D D3Y57_08115 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D D3Y57_08485 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D3Y57_08270 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D3Y57_18300 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D D3Y57_02005 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D D3Y57_02190 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D D3Y57_12760 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D D3Y57_01535 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D D3Y57_03130 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D D3Y57_01415 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D D3Y57_01430 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D D3Y57_01420 molecular chaperone K07346 fimC; fimbrial chaperone protein D D3Y57_01425 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D D3Y57_18955 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_18960 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_11295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_11335 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D D3Y57_16490 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D D3Y57_11330 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D D3Y57_16480 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D D3Y57_11325 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D D3Y57_17340 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D D3Y57_11320 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D D3Y57_16475 pilus assembly protein TadB K12510 tadB; tight adherence protein B D D3Y57_11315 hypothetical protein K12510 tadB; tight adherence protein B D D3Y57_16470 type II secretion system F family protein K12511 tadC; tight adherence protein C D D3Y57_11310 type II secretion system F family protein K12511 tadC; tight adherence protein C D D3Y57_11280 hypothetical protein K27079 tadD; tight adherence protein D D D3Y57_11300 hypothetical protein K27080 tadG; tight adherence protein G D D3Y57_11530 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D D3Y57_08670 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D D3Y57_06350 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D D3Y57_06345 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D D3Y57_08675 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D3Y57_06340 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D D3Y57_06335 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_09700 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D D3Y57_18595 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D D3Y57_01090 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D D3Y57_05790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D3Y57_18580 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D D3Y57_18575 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D3Y57_18585 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D3Y57_18590 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D3Y57_10010 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D D3Y57_06000 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D D3Y57_18570 histidine phosphotransferase K13588 chpT; histidine phosphotransferase ChpT D D3Y57_09170 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA D D3Y57_09765 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D D3Y57_00280 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D D3Y57_00275 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D D3Y57_04035 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D3Y57_08830 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D D3Y57_16405 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D D3Y57_16410 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D3Y57_16415 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D D3Y57_13155 cytochrome c family protein K08738 CYC; cytochrome c D D3Y57_17215 cytochrome c family protein K08738 CYC; cytochrome c D D3Y57_09570 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D D3Y57_09565 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein D D3Y57_18195 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D D3Y57_14775 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D D3Y57_15745 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D D3Y57_07240 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D D3Y57_07245 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D D3Y57_17690 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor D D3Y57_06230 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor D D3Y57_01330 hypothetical protein K07165 fecR; transmembrane sensor D D3Y57_01845 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor D D3Y57_08860 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D D3Y57_04110 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:spha04148] D D3Y57_18500 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D D3Y57_16405 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:spha02024] D D3Y57_06330 RNA chaperone Hfq K03666 hfq; host factor-I protein D D3Y57_18675 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D D3Y57_18670 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D D3Y57_17885 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D D3Y57_13540 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_08125 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_04270 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_01705 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D D3Y57_01700 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D D3Y57_01695 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D D3Y57_01690 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D D3Y57_01685 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D D3Y57_01680 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D D3Y57_01675 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D D3Y57_01670 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D D3Y57_17045 N-acyl homoserine lactonase family protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D D3Y57_03915 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_04305 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_05225 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_01955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_08250 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D D3Y57_12255 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D D3Y57_06105 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_05150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_13935 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_17115 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D3Y57_07825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D3Y57_16930 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D3Y57_18690 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D3Y57_08965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D3Y57_16105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D3Y57_05675 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D3Y57_06595 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D3Y57_07865 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D3Y57_06575 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:spha02030] D D3Y57_05790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D3Y57_18575 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D3Y57_18580 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D D3Y57_18585 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D3Y57_18590 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D3Y57_01090 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D D3Y57_18595 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D D3Y57_04170 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D3Y57_04205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D3Y57_04045 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D3Y57_04040 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:spha02040] D D3Y57_04160 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D D3Y57_04165 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D D3Y57_04170 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D3Y57_04175 hypothetical protein K02411 fliH; flagellar assembly protein FliH D D3Y57_04180 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D3Y57_04195 hypothetical protein K02415 fliL; flagellar protein FliL D D3Y57_04205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D3Y57_04215 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D3Y57_04220 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D3Y57_04225 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR D D3Y57_04145 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D D3Y57_04230 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D3Y57_04100 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D D3Y57_04095 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D D3Y57_04090 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D D3Y57_04085 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D D3Y57_04080 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D D3Y57_04075 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D D3Y57_04070 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D D3Y57_04065 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D D3Y57_04060 flagellar biosynthesis protein FlgI K02395 flgJ; peptidoglycan hydrolase FlgJ D D3Y57_04055 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D D3Y57_04050 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D D3Y57_04155 flagellin FliC K02406 fliC; flagellin D D3Y57_04045 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D3Y57_04040 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D3Y57_04110 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D D3Y57_05805 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D D3Y57_04035 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D3Y57_09700 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D D3Y57_04150 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D D3Y57_05865 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:spha04980] D D3Y57_10640 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D D3Y57_13800 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D D3Y57_17575 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D D3Y57_17580 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:spha01501] D D3Y57_18765 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D D3Y57_13415 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D D3Y57_14845 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D D3Y57_06100 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05145 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D D3Y57_06105 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_05150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_13935 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein D D3Y57_12420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_09595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_11910 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_19725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D D3Y57_15940 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:spha01502] D D3Y57_15950 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D D3Y57_15970 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:spha01503] D D3Y57_12795 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D3Y57_12680 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D3Y57_06100 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05145 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:spha01000] C 01001 Protein kinases [BR:spha01001] D D3Y57_08080 HAMP domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D D3Y57_17650 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D D3Y57_01385 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D D3Y57_14740 protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D D3Y57_18205 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D D3Y57_17275 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D D3Y57_13535 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_08120 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_04275 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_03135 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D D3Y57_06350 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D D3Y57_06340 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D D3Y57_18575 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D3Y57_06000 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D D3Y57_00280 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D D3Y57_09360 sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D D3Y57_14565 DUF4118 domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D D3Y57_01405 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:spha01009] D D3Y57_05615 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D D3Y57_19790 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:spha01002] D D3Y57_11285 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D3Y57_16690 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D3Y57_16500 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D D3Y57_08160 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D D3Y57_12855 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D D3Y57_17315 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D D3Y57_18240 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D3Y57_01860 asparagine synthetase B family protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D D3Y57_14230 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D D3Y57_14855 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D D3Y57_03205 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D D3Y57_09410 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D D3Y57_06525 peptidase M2 family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D D3Y57_14495 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D D3Y57_16035 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D D3Y57_13295 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D D3Y57_18370 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D3Y57_18860 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D D3Y57_12130 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D D3Y57_02110 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D D3Y57_19585 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B D D3Y57_06785 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D D3Y57_08665 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D D3Y57_17410 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D D3Y57_05955 peptidase M28 family protein K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-] D D3Y57_11755 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D D3Y57_06075 RIP metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D D3Y57_18565 M67 family peptidase K20110 JAMM1; desampylase [EC:3.4.19.15] D D3Y57_12680 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D3Y57_06540 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D D3Y57_14990 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D D3Y57_06295 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D3Y57_05590 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D D3Y57_18645 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D D3Y57_11440 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D3Y57_01600 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D D3Y57_15535 alpha/beta hydrolase K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D D3Y57_13220 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D D3Y57_11425 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D D3Y57_17530 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D D3Y57_10475 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D D3Y57_16045 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D D3Y57_13410 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D D3Y57_11810 tldD; metalloprotease TldD K03568 tldD; TldD protein D D3Y57_12685 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D D3Y57_12690 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:spha01003] D D3Y57_11340 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D D3Y57_11240 glycosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D D3Y57_13865 hopanoid biosynthesis associated glycosyl transferase HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D D3Y57_07945 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D D3Y57_16845 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D D3Y57_08720 glycosyltransferase, exosortase A system-associated K16150 K16150; glycogen synthase [EC:2.4.1.11] D D3Y57_18550 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D D3Y57_12560 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D D3Y57_12420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_09595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_11910 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_04980 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D D3Y57_14700 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-] D D3Y57_14695 hypothetical protein K16558 exoL; succinoglycan biosynthesis protein ExoL [EC:2.-.-.-] D D3Y57_14675 glycosyltransferase family 2 protein K16556 exoM; succinoglycan biosynthesis protein ExoM [EC:2.4.-.-] D D3Y57_14690 glycosyltransferase family 2 protein K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-] D D3Y57_08610 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:spha01005] D D3Y57_07275 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D D3Y57_07270 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D D3Y57_07300 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D D3Y57_15780 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D D3Y57_15775 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D D3Y57_15785 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D D3Y57_15770 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D D3Y57_11145 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:spha01011] D D3Y57_13990 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D D3Y57_15980 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D D3Y57_10470 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D3Y57_15975 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D D3Y57_15960 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D D3Y57_15945 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D D3Y57_10475 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D D3Y57_15970 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D D3Y57_07870 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D D3Y57_12420 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_09595 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_11910 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D D3Y57_12560 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D D3Y57_19725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D D3Y57_15940 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D3Y57_06295 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D D3Y57_18550 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D D3Y57_14855 murein L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D D3Y57_06785 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-] D D3Y57_14230 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D D3Y57_05975 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D3Y57_18450 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D3Y57_07855 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D D3Y57_06285 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D D3Y57_18830 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D D3Y57_18330 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D3Y57_06290 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D D3Y57_12795 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:spha01004] D D3Y57_01280 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D D3Y57_13090 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D D3Y57_18825 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D D3Y57_03450 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_09505 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_05130 glucose 1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15415 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15320 SDR family NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15350 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_15500 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_17435 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D D3Y57_06090 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D D3Y57_10535 fabI; enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D D3Y57_11730 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D D3Y57_10210 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D D3Y57_03460 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D D3Y57_03445 acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D D3Y57_13475 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D D3Y57_10155 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D D3Y57_03835 hypothetical protein K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-] D D3Y57_03340 cyclohexanecarboxylate-CoA ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-] D D3Y57_03915 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_04305 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_05225 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_01955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_19685 long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D D3Y57_05195 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D D3Y57_13095 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D D3Y57_08320 plsY; glycerol-3-phosphate 1-O-acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D D3Y57_12495 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:spha01008] D D3Y57_07445 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:spha01006] D D3Y57_07920 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D D3Y57_14510 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D D3Y57_06060 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D D3Y57_05890 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D D3Y57_11030 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D D3Y57_19785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D D3Y57_12615 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D D3Y57_11470 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:spha01007] D D3Y57_13055 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D D3Y57_18635 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_12135 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_05775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D3Y57_07875 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D D3Y57_17950 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D3Y57_09405 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D3Y57_06310 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D3Y57_12630 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D3Y57_18020 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D3Y57_12285 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D3Y57_18415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D3Y57_13455 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D3Y57_16450 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D3Y57_16455 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D3Y57_18870 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D3Y57_16590 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D3Y57_11015 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D3Y57_06015 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D3Y57_12530 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D3Y57_12525 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D3Y57_14020 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D D3Y57_12505 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D D3Y57_08330 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D D3Y57_12100 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D D3Y57_09265 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D D3Y57_16340 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D D3Y57_08205 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D D3Y57_12125 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D D3Y57_13140 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:spha00194] D D3Y57_17345 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D D3Y57_17350 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D D3Y57_17355 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D D3Y57_17360 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D D3Y57_17365 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D D3Y57_16270 ATPase K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D3Y57_16275 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D D3Y57_16265 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D D3Y57_16260 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D D3Y57_16255 ATP synthase subunit K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:spha03000] D D3Y57_03850 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_15585 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D D3Y57_15665 helix-turn-helix domain-containing protein K07506 K07506; AraC family transcriptional regulator D D3Y57_17375 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D D3Y57_16320 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D D3Y57_00535 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D D3Y57_02815 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D D3Y57_16065 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D D3Y57_07720 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D D3Y57_05200 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D D3Y57_03290 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D D3Y57_04800 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D D3Y57_04855 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D D3Y57_04550 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D D3Y57_15180 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D D3Y57_15175 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D D3Y57_09475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3Y57_14090 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3Y57_02120 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D D3Y57_02670 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D D3Y57_05030 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D D3Y57_03365 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D D3Y57_01525 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D D3Y57_19485 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D D3Y57_09950 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D D3Y57_08250 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D D3Y57_07760 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D D3Y57_00550 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D D3Y57_00600 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D D3Y57_08165 XRE family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D D3Y57_14445 helix-turn-helix domain-containing protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D D3Y57_06695 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D D3Y57_17645 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D D3Y57_04035 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D3Y57_16910 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D D3Y57_11945 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator D D3Y57_15055 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D D3Y57_11585 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D D3Y57_03310 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_01035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_12300 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_14050 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D D3Y57_16190 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D D3Y57_06610 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator D D3Y57_06630 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D D3Y57_00415 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D D3Y57_12045 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D D3Y57_04720 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D D3Y57_10680 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator D D3Y57_18880 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D3Y57_08360 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D D3Y57_15925 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:spha03021] D D3Y57_08940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D3Y57_16860 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D3Y57_12745 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D D3Y57_05805 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D D3Y57_11395 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D D3Y57_01505 RNA polymerase sigma factor K24073 cnrH; RNA polymerase sigma factor CnrH D D3Y57_18555 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D D3Y57_09700 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D D3Y57_04150 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D D3Y57_14610 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D D3Y57_11555 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D D3Y57_16925 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D D3Y57_01355 HAMP domain-containing protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D D3Y57_01380 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D D3Y57_01385 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D D3Y57_18880 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D3Y57_05830 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D D3Y57_05970 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D D3Y57_12330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:spha03019] D D3Y57_11190 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D D3Y57_12800 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D D3Y57_01605 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D3Y57_06685 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D D3Y57_16570 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D3Y57_09980 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D D3Y57_11780 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D3Y57_05865 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D3Y57_14570 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D3Y57_12330 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D D3Y57_16215 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D3Y57_17550 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D3Y57_06330 RNA chaperone Hfq K03666 hfq; host factor-I protein D D3Y57_18400 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D D3Y57_04950 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D D3Y57_08810 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D D3Y57_18285 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:spha03011] D D3Y57_17145 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D D3Y57_06040 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D D3Y57_09035 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D D3Y57_08375 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D D3Y57_08980 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D D3Y57_01285 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D D3Y57_09085 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D D3Y57_08995 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D D3Y57_08515 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D D3Y57_09070 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D D3Y57_08945 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D D3Y57_09090 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D D3Y57_08950 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D D3Y57_09000 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D D3Y57_14575 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D D3Y57_06570 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D D3Y57_09020 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D D3Y57_01290 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D D3Y57_09045 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D D3Y57_08275 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D D3Y57_12020 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D3Y57_11410 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D D3Y57_16915 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D D3Y57_09065 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D D3Y57_09060 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D D3Y57_09005 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D D3Y57_08990 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D D3Y57_01295 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D D3Y57_16900 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D D3Y57_16920 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D D3Y57_16895 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D D3Y57_08510 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D D3Y57_09015 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D D3Y57_08970 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D D3Y57_09030 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D D3Y57_08935 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D D3Y57_08985 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D D3Y57_06545 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D D3Y57_12535 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D D3Y57_09210 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D D3Y57_09040 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D D3Y57_09055 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D D3Y57_09010 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D D3Y57_09215 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D D3Y57_11635 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D D3Y57_09025 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D D3Y57_08975 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D D3Y57_06095 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D D3Y57_13100 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D D3Y57_10005 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D D3Y57_07810 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D D3Y57_12540 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D D3Y57_13310 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D D3Y57_16440 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D D3Y57_13515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D3Y57_01260 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D3Y57_01245 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D3Y57_13510 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:spha03009] D D3Y57_01605 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D3Y57_11190 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D D3Y57_01615 GTPase Era K03595 era; GTPase D D3Y57_09240 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D D3Y57_18880 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D D3Y57_14610 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D D3Y57_11555 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D D3Y57_16925 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D D3Y57_12175 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D D3Y57_18755 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D D3Y57_12610 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D D3Y57_12310 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D3Y57_15930 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D D3Y57_16155 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D D3Y57_08235 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D D3Y57_12840 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D D3Y57_10140 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D D3Y57_11775 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D D3Y57_10270 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D D3Y57_18490 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D D3Y57_09150 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D3Y57_18760 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D D3Y57_10675 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D D3Y57_18560 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D D3Y57_12825 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D D3Y57_09960 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D D3Y57_18865 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D D3Y57_17430 methyltransferase domain-containing protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D D3Y57_12820 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D D3Y57_12800 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D D3Y57_19850 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D D3Y57_02920 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D D3Y57_08865 ribosome biogenesis GTPase Der K03977 engA; GTPase D D3Y57_07265 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D D3Y57_11380 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D D3Y57_14595 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D D3Y57_14615 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D D3Y57_11770 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D D3Y57_09930 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D D3Y57_12370 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D D3Y57_16430 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:spha03016] D D3Y57_17105 ribonuclease T K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19] D D3Y57_18635 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_12135 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_16590 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D D3Y57_12630 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D D3Y57_12285 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D3Y57_06310 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D D3Y57_09405 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D3Y57_18415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D3Y57_06015 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D D3Y57_11015 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D D3Y57_18870 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D D3Y57_17950 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D D3Y57_18020 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D D3Y57_13455 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D D3Y57_12530 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D D3Y57_12525 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D D3Y57_05775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D3Y57_07875 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D D3Y57_03945 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D3Y57_10750 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D3Y57_14630 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D D3Y57_18245 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D D3Y57_14580 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D D3Y57_18520 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_18525 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_07265 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D D3Y57_19785 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D D3Y57_12320 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D D3Y57_12315 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D3Y57_04575 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D D3Y57_11205 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D D3Y57_18605 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D D3Y57_16180 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D D3Y57_09680 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D D3Y57_18410 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D D3Y57_13055 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D D3Y57_16450 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D D3Y57_16455 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D D3Y57_11650 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D D3Y57_06355 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D D3Y57_09940 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D D3Y57_06590 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D D3Y57_08365 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D D3Y57_05900 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D D3Y57_06550 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D D3Y57_16400 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D D3Y57_18270 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D D3Y57_09150 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D D3Y57_10355 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D D3Y57_10375 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D D3Y57_10990 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D D3Y57_07905 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D D3Y57_16360 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D D3Y57_16365 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D D3Y57_12660 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D D3Y57_10780 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D D3Y57_07885 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D D3Y57_11750 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D D3Y57_09965 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D D3Y57_12190 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D D3Y57_05625 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D D3Y57_16570 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D D3Y57_14570 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D D3Y57_06555 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:spha03012] D D3Y57_14600 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D D3Y57_11020 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D D3Y57_07960 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D D3Y57_09075 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D3Y57_09080 fusA; elongation factor G K02355 fusA; elongation factor G D D3Y57_13460 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D D3Y57_06055 ribosome recycling factor K02838 frr; ribosome recycling factor D D3Y57_13465 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D D3Y57_16435 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D D3Y57_13970 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D D3Y57_06780 efp; elongation factor P K02356 efp; elongation factor P D D3Y57_09590 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D D3Y57_12460 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D D3Y57_09145 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:spha03110] D D3Y57_07985 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D D3Y57_13290 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D D3Y57_05595 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D D3Y57_16040 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D D3Y57_16215 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D3Y57_19600 Hsp70 family protein K04046 yegD; hypothetical chaperone protein D D3Y57_17550 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D3Y57_10055 J domain-containing protein K09539 DNAJC19; DnaJ homolog subfamily C member 19 D D3Y57_16220 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D D3Y57_16350 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D D3Y57_01140 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D3Y57_16195 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D3Y57_10125 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D D3Y57_17545 co-chaperone GroES K04078 groES; chaperonin GroES D D3Y57_12680 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D D3Y57_11755 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D D3Y57_16260 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D D3Y57_01420 molecular chaperone K07346 fimC; fimbrial chaperone protein D D3Y57_07865 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D3Y57_16210 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D D3Y57_18680 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D D3Y57_18360 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D D3Y57_05650 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D D3Y57_12225 co-chaperone YbbN K05838 ybbN; putative thioredoxin D D3Y57_18980 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D D3Y57_17070 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D D3Y57_06410 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:spha04131] D D3Y57_18375 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D D3Y57_11190 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D D3Y57_06810 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D3Y57_13305 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:spha03032] D D3Y57_16520 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D3Y57_14920 reverse transcriptase-like protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D D3Y57_03850 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_06510 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D3Y57_13085 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D3Y57_17140 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D3Y57_08270 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D3Y57_16620 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D D3Y57_14270 virulence-associated protein E K02316 dnaG; DNA primase [EC:2.7.7.101] D D3Y57_01050 replication protein C K18996 repC; replication initiation protein RepC D D3Y57_00925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10485 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_00740 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10075 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D3Y57_12295 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D3Y57_06305 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D3Y57_12365 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D3Y57_18540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_14330 AAA family ATPase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_07175 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D D3Y57_12145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D3Y57_17420 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D3Y57_05910 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D D3Y57_10975 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D D3Y57_08820 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D3Y57_16325 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D3Y57_08730 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:spha03036] D D3Y57_03850 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_01605 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D D3Y57_01040 methylase K26273 SBNO; protein strawberry notch D D3Y57_06510 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D3Y57_13085 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D3Y57_17140 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D3Y57_00010 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D D3Y57_08270 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D D3Y57_17630 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D D3Y57_09990 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D D3Y57_06330 RNA chaperone Hfq K03666 hfq; host factor-I protein D D3Y57_09475 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3Y57_14090 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D D3Y57_13190 chromosome segregation protein K03529 smc; chromosome segregation protein D D3Y57_09390 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D D3Y57_09385 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D D3Y57_15995 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D3Y57_12480 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D3Y57_15940 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D D3Y57_12240 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D D3Y57_15990 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D D3Y57_15965 cell division protein FtsW K03588 ftsW; cell division protein FtsW D D3Y57_12485 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D D3Y57_16000 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D3Y57_06825 cell division protein ZapA K09888 zapA; cell division protein ZapA D D3Y57_17490 AFG1 family ATPase K06916 zapE; cell division protein ZapE D D3Y57_12795 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D3Y57_06100 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_10620 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3Y57_19740 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3Y57_19735 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D D3Y57_19730 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D D3Y57_19720 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D D3Y57_03315 chromosome partitioning protein K03496 parA; chromosome partitioning protein D D3Y57_00895 ParA family protein K03496 parA; chromosome partitioning protein D D3Y57_12305 ParA family protein K03496 parA; chromosome partitioning protein D D3Y57_10050 ATPase K03496 parA; chromosome partitioning protein D D3Y57_16980 ParA family protein K03496 parA; chromosome partitioning protein D D3Y57_03310 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_01035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_12300 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_08820 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D3Y57_16325 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D3Y57_12315 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D D3Y57_12310 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D D3Y57_05900 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D D3Y57_17400 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D D3Y57_18945 recombinase XerD K04763 xerD; integrase/recombinase XerD D D3Y57_18995 site-specific integrase K04763 xerD; integrase/recombinase XerD D D3Y57_12695 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D D3Y57_07830 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:spha03400] D D3Y57_18105 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D D3Y57_13170 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D D3Y57_01635 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D D3Y57_13405 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] D D3Y57_18965 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D D3Y57_08300 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D D3Y57_17375 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D D3Y57_08395 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D3Y57_18455 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D D3Y57_12105 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D D3Y57_08280 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D D3Y57_12250 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D3Y57_09320 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D D3Y57_17420 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D D3Y57_12145 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D D3Y57_12740 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D D3Y57_13840 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D D3Y57_16285 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D D3Y57_18730 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D D3Y57_16860 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D D3Y57_08940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D D3Y57_12745 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D D3Y57_05755 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D D3Y57_11500 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D D3Y57_13240 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D D3Y57_07925 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D D3Y57_10075 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D D3Y57_12295 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D D3Y57_06305 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D D3Y57_12365 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D D3Y57_18540 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_14330 AAA family ATPase K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D D3Y57_00925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10485 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_00740 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_03855 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D D3Y57_06005 recA; recombinase RecA K03553 recA; recombination protein RecA D D3Y57_13360 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D D3Y57_13370 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D D3Y57_13355 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D D3Y57_18815 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D D3Y57_16305 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D D3Y57_18255 recR; recombination protein RecR K06187 recR; recombination protein RecR D D3Y57_17415 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D D3Y57_06970 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D D3Y57_12675 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D D3Y57_14885 Ku protein K10979 ku; DNA end-binding protein Ku D D3Y57_14880 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D D3Y57_05910 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D D3Y57_10975 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D D3Y57_08730 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D D3Y57_06510 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D D3Y57_19030 rect protein K07455 recT; recombination protein RecT D D3Y57_13085 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D D3Y57_17140 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D D3Y57_11780 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D D3Y57_14835 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D D3Y57_18645 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D D3Y57_04960 hypothetical protein K14160 imuA; protein ImuA D D3Y57_04965 DNA polymerase Y family protein K14161 imuB; protein ImuB D D3Y57_04970 dnaE; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D D3Y57_13060 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D D3Y57_11705 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D D3Y57_12780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D D3Y57_12770 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:spha03029] D D3Y57_16410 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D D3Y57_14600 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D D3Y57_11020 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D D3Y57_09075 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D3Y57_09080 fusA; elongation factor G K02355 fusA; elongation factor G D D3Y57_13030 ubiquinol-cytochrome C chaperone K17662 CBP3; cytochrome b pre-mRNA-processing protein 3 D D3Y57_10130 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D D3Y57_01615 GTPase Era K03595 era; GTPase D D3Y57_05775 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D D3Y57_12285 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D D3Y57_18415 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D D3Y57_09405 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D D3Y57_19870 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D D3Y57_19860 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D D3Y57_00925 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_10485 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_00740 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D D3Y57_06080 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D D3Y57_16215 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D3Y57_01140 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D3Y57_16195 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D D3Y57_10055 J domain-containing protein K09539 DNAJC19; DnaJ homolog subfamily C member 19 D D3Y57_17550 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D3Y57_17545 co-chaperone GroES K04078 groES; chaperonin GroES D D3Y57_16220 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D D3Y57_18520 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_18525 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_18530 2Fe-2S ferredoxin K22071 FDX2; ferredoxin-2, mitochondrial D D3Y57_17070 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D D3Y57_09630 class I SAM-dependent methyltransferase K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D D3Y57_12695 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D D3Y57_11470 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D D3Y57_11475 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D D3Y57_08485 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D D3Y57_07825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D3Y57_11490 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D D3Y57_12405 SCO family protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:spha02000] D D3Y57_11660 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D D3Y57_08755 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D D3Y57_07625 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D D3Y57_19505 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D D3Y57_14475 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D D3Y57_19545 nitrate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D D3Y57_07525 hypothetical protein K15553 ssuA; sulfonate transport system substrate-binding protein D D3Y57_19550 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_19555 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_07520 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D D3Y57_19560 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D D3Y57_07515 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D D3Y57_10300 ABC transporter permease subunit K05845 opuC; osmoprotectant transport system substrate-binding protein D D3Y57_10295 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D D3Y57_13555 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D D3Y57_09660 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D D3Y57_09650 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D D3Y57_09655 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D D3Y57_09665 ABC transporter K18480 linN; cholesterol transport system auxiliary component D D3Y57_13915 hopanoid biosynthesis protein HpnM K07323 mlaC; phospholipid transport system substrate-binding protein D D3Y57_14980 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D D3Y57_14975 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D D3Y57_14970 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D D3Y57_14965 ATP-binding cassette domain-containing protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D D3Y57_17115 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D D3Y57_08430 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D D3Y57_08435 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D D3Y57_08440 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D D3Y57_15755 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D D3Y57_15750 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D D3Y57_15760 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D D3Y57_09290 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein D D3Y57_09295 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D D3Y57_09695 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D D3Y57_18705 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D D3Y57_18710 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D D3Y57_06425 heme ABC transporter permease K02195 ccmC; heme exporter protein C D D3Y57_10275 heme ABC transporter permease CcmB K02194 ccmB; heme exporter protein B D D3Y57_10280 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D D3Y57_12485 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein D D3Y57_12480 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D D3Y57_02910 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D D3Y57_10790 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D D3Y57_16335 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D D3Y57_02915 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D D3Y57_10785 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D D3Y57_10205 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D D3Y57_10395 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D D3Y57_12470 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D D3Y57_18025 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D D3Y57_01470 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D D3Y57_11265 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D D3Y57_02800 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D D3Y57_18765 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D D3Y57_13715 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D D3Y57_10980 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D D3Y57_10890 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D D3Y57_11170 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D D3Y57_14055 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D D3Y57_08640 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D D3Y57_11735 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D D3Y57_18275 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D D3Y57_18280 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D D3Y57_12375 PTS lactose transporter subunit IIC K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D D3Y57_09435 aquaporin Z K06188 aqpZ; aquaporin Z D D3Y57_16680 ammonium transporter K03320 amt; ammonium transporter, Amt family D D3Y57_11790 ammonium transporter K03320 amt; ammonium transporter, Amt family D D3Y57_07835 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_07955 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_08000 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_05655 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_02685 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_14070 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_03885 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_12850 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_10625 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_08175 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D D3Y57_14225 marine proteobacterial sortase target protein K07114 yfbK; Ca-activated chloride channel homolog D D3Y57_14545 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D D3Y57_11165 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D D3Y57_08580 urea transporter K08717 utp; urea transporter D D3Y57_04045 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D3Y57_04040 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D3Y57_08770 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D D3Y57_08760 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D D3Y57_08765 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D D3Y57_13380 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D D3Y57_13385 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D D3Y57_17745 hypothetical protein K03284 corA; magnesium transporter D D3Y57_10605 zinc transporter ZntB K16074 zntB; zinc transporter D D3Y57_10670 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D D3Y57_00835 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D D3Y57_13630 DUF1211 domain-containing protein K24915 TMEM175; TMEM175 potassium channel family protein D D3Y57_11655 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D D3Y57_10080 porin family protein K16079 omp31; outer membrane immunogenic protein D D3Y57_07285 porin family protein K16079 omp31; outer membrane immunogenic protein D D3Y57_13575 carbohydrate porin K16080 mnoP; high affinity Mn2+ porin D D3Y57_08030 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D D3Y57_03145 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D D3Y57_01425 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D D3Y57_12050 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin D D3Y57_13730 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D D3Y57_19465 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D D3Y57_08425 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D D3Y57_03120 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_07645 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_07745 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_16675 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_03415 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02115 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_16905 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02275 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02305 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_03770 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_12715 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_14110 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_14180 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_03830 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_03880 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_03900 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_18700 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_04320 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_05715 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_04530 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02870 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02875 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_06180 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_14925 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_04860 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_19580 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_19630 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_04930 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_04945 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_05100 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_15560 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_05205 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_15580 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_15680 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_07540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_03655 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_14075 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_14165 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_10240 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_06235 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_19595 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_11025 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_07420 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_01850 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_01995 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02390 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02410 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_02635 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_13275 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D D3Y57_01485 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D D3Y57_06210 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein D D3Y57_07450 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system D D3Y57_06105 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_05150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_13935 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_18195 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D D3Y57_14775 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D D3Y57_15745 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D D3Y57_01460 carbohydrate porin K07267 oprB; porin D D3Y57_06080 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D D3Y57_16140 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D D3Y57_08695 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D D3Y57_14100 hypothetical protein K09800 tamB; translocation and assembly module TamB D D3Y57_08690 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D D3Y57_19275 hypothetical protein K21449 ata; trimeric autotransporter adhesin D D3Y57_16730 hypothetical protein K21449 ata; trimeric autotransporter adhesin D D3Y57_09690 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA D D3Y57_09685 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D D3Y57_18365 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D D3Y57_12290 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D D3Y57_09925 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein D D3Y57_12215 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D D3Y57_10565 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D D3Y57_19355 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein D D3Y57_05145 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D D3Y57_07590 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump D D3Y57_08260 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D D3Y57_00840 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein D D3Y57_13430 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter D D3Y57_05705 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D D3Y57_07560 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D D3Y57_11860 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D D3Y57_02930 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D D3Y57_04290 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D D3Y57_18915 sodium:proton exchanger K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D D3Y57_06020 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter D D3Y57_19415 chloride channel protein K03281 clcA; chloride channel protein, CIC family D D3Y57_00850 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family D D3Y57_03110 HoxN/HupN/NixA family nickel/cobalt transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D D3Y57_07870 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D D3Y57_06390 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D D3Y57_11105 VUT family protein K09125 yhhQ; queuosine precursor transporter D D3Y57_15870 VUT family protein K09125 yhhQ; queuosine precursor transporter D D3Y57_00295 VIT family protein K22736 VIT; vacuolar iron transporter family protein D D3Y57_11125 MarC family protein K05595 marC; multiple antibiotic resistance protein D D3Y57_15965 cell division protein FtsW K03588 ftsW; cell division protein FtsW D D3Y57_17095 energy transducer TonB K03832 tonB; periplasmic protein TonB D D3Y57_13400 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D D3Y57_13530 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D D3Y57_04280 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D D3Y57_13395 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D D3Y57_13980 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D D3Y57_16615 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D D3Y57_10895 HlyD family efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D D3Y57_19360 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D D3Y57_01480 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D D3Y57_15040 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D D3Y57_06215 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D D3Y57_06100 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_14205 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D D3Y57_07585 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D D3Y57_14740 protein-tyrosine kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D D3Y57_18205 exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D D3Y57_18200 chain-length determining protein K25590 epsF; protein tyrosine kinase modulator D D3Y57_10495 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D D3Y57_10490 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D D3Y57_08230 tryptophan-rich sensory protein K05770 TSPO; translocator protein D D3Y57_09365 entericidin A/B family lipoprotein K16348 ecnB; entericidin B D D3Y57_06415 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D D3Y57_00430 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D D3Y57_11070 MipA/OmpV family protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:spha02044] D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein D D3Y57_18215 general secretion pathway protein K02450 gspA; general secretion pathway protein A D D3Y57_06490 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C D D3Y57_06485 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D D3Y57_06470 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D D3Y57_06465 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D D3Y57_06460 gspJ; type II secretion system protein GspJ K02459 gspJ; general secretion pathway protein J D D3Y57_06455 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D D3Y57_06450 hypothetical protein K02461 gspL; general secretion pathway protein L D D3Y57_06445 type II secretion system protein M K02462 gspM; general secretion pathway protein M D D3Y57_06440 type II secretion system protein N K02463 gspN; general secretion pathway protein N D D3Y57_11285 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D3Y57_16690 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D3Y57_16500 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D D3Y57_11335 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D D3Y57_16490 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D D3Y57_11330 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D D3Y57_16485 hypothetical protein K02281 cpaD; pilus assembly protein CpaD D D3Y57_16480 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D D3Y57_11325 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D D3Y57_17340 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D D3Y57_11320 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D D3Y57_16475 pilus assembly protein TadB K12510 tadB; tight adherence protein B D D3Y57_11315 hypothetical protein K12510 tadB; tight adherence protein B D D3Y57_16470 type II secretion system F family protein K12511 tadC; tight adherence protein C D D3Y57_11310 type II secretion system F family protein K12511 tadC; tight adherence protein C D D3Y57_11280 hypothetical protein K27079 tadD; tight adherence protein D D D3Y57_11300 hypothetical protein K27080 tadG; tight adherence protein G D D3Y57_18955 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_18960 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_11295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_11115 YggT family protein K02221 yggT; YggT family protein D D3Y57_04145 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D D3Y57_04230 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D3Y57_04165 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D D3Y57_04175 hypothetical protein K02411 fliH; flagellar assembly protein FliH D D3Y57_04180 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D3Y57_04205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D3Y57_04215 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D3Y57_04220 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D3Y57_04225 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR D D3Y57_00760 type VI secretion protein K03194 virB1; type IV secretion system protein VirB1 D D3Y57_00770 hypothetical protein K03197 virB2; type IV secretion system protein VirB2 D D3Y57_00775 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3 D D3Y57_00780 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D D3Y57_00785 type VI secretion protein K03200 virB5; type IV secretion system protein VirB5 D D3Y57_00795 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6 D D3Y57_00800 conjugal transfer protein TraJ K03203 virB8; type IV secretion system protein VirB8 D D3Y57_00805 conjugal transfer protein K03204 virB9; type IV secretion system protein VirB9 D D3Y57_00810 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10 D D3Y57_01720 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D3Y57_00820 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D D3Y57_01705 conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC D D3Y57_01700 conjugal transfer protein K20529 trbD; type IV secretion system protein TrbD D D3Y57_01695 conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8] D D3Y57_01680 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF D D3Y57_01675 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG D D3Y57_01670 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI D D3Y57_01690 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ D D3Y57_01685 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL D D3Y57_08085 FHA domain-containing protein K11913 fha1; type VI secretion system protein D D3Y57_01420 molecular chaperone K07346 fimC; fimbrial chaperone protein D D3Y57_01425 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D D3Y57_01415 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D D3Y57_01430 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D D3Y57_05675 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D D3Y57_07865 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D D3Y57_16110 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D D3Y57_16930 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D D3Y57_16115 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D D3Y57_18690 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D D3Y57_08965 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D D3Y57_06575 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D D3Y57_06595 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D D3Y57_16105 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D D3Y57_07825 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D D3Y57_09380 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D D3Y57_09375 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D D3Y57_09370 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:spha02042] D D3Y57_11655 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:spha02022] D D3Y57_17275 ATPase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D D3Y57_17265 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D D3Y57_13535 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_08120 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_04275 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D D3Y57_13540 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_08125 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_04270 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D D3Y57_18300 DNA-binding response regulator K14981 chvI; two-component system, OmpR family, response regulator ChvI D D3Y57_17845 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D3Y57_14485 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D3Y57_06200 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D3Y57_16025 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D3Y57_00570 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D3Y57_14950 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D D3Y57_03130 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D D3Y57_03135 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D D3Y57_10870 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D D3Y57_06350 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D D3Y57_06345 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D D3Y57_06340 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D D3Y57_06335 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D D3Y57_18575 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D3Y57_18585 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D3Y57_18590 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D3Y57_01090 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D D3Y57_10010 response regulator K11443 divK; two-component system, cell cycle response regulator DivK D D3Y57_06000 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D D3Y57_09170 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA D D3Y57_09765 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR D D3Y57_00280 PAS domain-containing sensor histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D D3Y57_00275 DNA-binding response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D D3Y57_08860 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D D3Y57_09360 sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D D3Y57_14565 DUF4118 domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D D3Y57_01085 response regulator K22010 pdtaR; two-component system, response regulator PdtaR D D3Y57_17610 response regulator K22010 pdtaR; two-component system, response regulator PdtaR D D3Y57_01405 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:spha02035] D D3Y57_18575 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D D3Y57_18580 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D D3Y57_18595 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D D3Y57_18590 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D D3Y57_01090 response regulator K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D D3Y57_18585 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D D3Y57_05790 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D D3Y57_04175 hypothetical protein K02411 fliH; flagellar assembly protein FliH D D3Y57_04180 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D D3Y57_04215 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D D3Y57_04220 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D D3Y57_04225 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR D D3Y57_04145 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D D3Y57_04230 flhB; flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D D3Y57_04170 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D D3Y57_04205 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D D3Y57_04165 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D D3Y57_04065 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D D3Y57_04070 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D D3Y57_04195 hypothetical protein K02415 fliL; flagellar protein FliL D D3Y57_04160 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D D3Y57_04100 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D D3Y57_04095 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D D3Y57_04090 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D D3Y57_04080 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D D3Y57_04075 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D D3Y57_04060 flagellar biosynthesis protein FlgI K02395 flgJ; peptidoglycan hydrolase FlgJ D D3Y57_04085 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE D D3Y57_04055 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D D3Y57_04050 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D D3Y57_04155 flagellin FliC K02406 fliC; flagellin D D3Y57_04150 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA D D3Y57_04045 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D D3Y57_04040 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D D3Y57_04035 sigma-54-dependent Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D D3Y57_04110 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D D3Y57_11285 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D3Y57_16690 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D D3Y57_18955 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_18960 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_11295 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA D D3Y57_16500 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43] D D3Y57_11335 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D D3Y57_16490 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC D D3Y57_11330 pilus assembly protein CpaC K02280 cpaC; pilus assembly protein CpaC D D3Y57_16485 hypothetical protein K02281 cpaD; pilus assembly protein CpaD D D3Y57_16480 pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D D3Y57_11325 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D D3Y57_17340 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D D3Y57_11320 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D D3Y57_01420 molecular chaperone K07346 fimC; fimbrial chaperone protein D D3Y57_01425 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D D3Y57_01415 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D D3Y57_01430 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:spha04812] D D3Y57_10620 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3Y57_19740 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3Y57_16000 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D3Y57_15995 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D D3Y57_03315 chromosome partitioning protein K03496 parA; chromosome partitioning protein D D3Y57_00895 ParA family protein K03496 parA; chromosome partitioning protein D D3Y57_12305 ParA family protein K03496 parA; chromosome partitioning protein D D3Y57_10050 ATPase K03496 parA; chromosome partitioning protein D D3Y57_16980 ParA family protein K03496 parA; chromosome partitioning protein D D3Y57_03310 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_01035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D D3Y57_12300 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:spha04147] D D3Y57_05865 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D D3Y57_06810 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D D3Y57_06805 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D D3Y57_13305 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D D3Y57_12130 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D D3Y57_02110 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D D3Y57_17550 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D D3Y57_16215 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D D3Y57_01590 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D D3Y57_06540 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D D3Y57_02055 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_03525 gluconolactonase K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_04595 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_01915 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_02350 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D D3Y57_18335 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D D3Y57_09075 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D D3Y57_11190 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D D3Y57_03945 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D3Y57_10750 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D D3Y57_03915 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_04305 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_05225 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_01955 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D D3Y57_02235 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03615 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_03970 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15400 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_15435 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_05350 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_11390 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_08745 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D D3Y57_06525 peptidase M2 family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D D3Y57_05615 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D D3Y57_08960 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D D3Y57_16420 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D D3Y57_10585 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D D3Y57_11155 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D D3Y57_16580 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D D3Y57_08675 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D D3Y57_18030 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D D3Y57_09725 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D D3Y57_10285 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D D3Y57_13135 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D D3Y57_12155 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D D3Y57_17515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_09115 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D D3Y57_02100 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D D3Y57_11865 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D D3Y57_16710 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D3Y57_07365 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D D3Y57_18685 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D D3Y57_00105 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:spha02048] D D3Y57_07170 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D D3Y57_10955 DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D D3Y57_03850 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_04730 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D D3Y57_10940 ATPase K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D D3Y57_10935 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D D3Y57_02780 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D D3Y57_02775 AbrB family transcriptional regulator K19156 prlF; antitoxin PrlF D D3Y57_17650 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D D3Y57_17645 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D D3Y57_06630 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D D3Y57_06625 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D D3Y57_06555 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D D3Y57_16000 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D D3Y57_10620 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3Y57_19740 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D D3Y57_08820 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D D3Y57_16325 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D D3Y57_18635 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_12135 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D D3Y57_05760 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D D3Y57_18520 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D D3Y57_18525 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:spha04090] D D3Y57_06540 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D D3Y57_06525 peptidase M2 family protein K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:spha01504] D D3Y57_03455 pentapeptide repeat-containing protein K18555 qnr; fluoroquinolone resistance protein D D3Y57_13415 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D D3Y57_14845 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D D3Y57_06100 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05140 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D D3Y57_05145 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D D3Y57_06105 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_05150 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_13935 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D D3Y57_06215 efflux RND transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D D3Y57_01525 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D D3Y57_18010 hypothetical protein K12340 tolC; outer membrane protein D D3Y57_15040 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system D D3Y57_07450 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:spha00537] D D3Y57_12130 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D D3Y57_02110 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:spha03100] D D3Y57_14400 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_13505 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_01250 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_17170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D D3Y57_19340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_18045 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_15865 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_01645 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D D3Y57_05735 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D D3Y57_06840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D D3Y57_18000 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D D3Y57_10150 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D3Y57_08200 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D D3Y57_11930 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D3Y57_17860 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D D3Y57_12815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D3Y57_08545 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D3Y57_12220 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D D3Y57_06435 tRNA-His K14226 tRNA-His; tRNA His D D3Y57_13500 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D3Y57_01255 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D D3Y57_05575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_12880 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_12465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_17135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_07795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D D3Y57_19715 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D3Y57_08405 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D D3Y57_01235 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_05935 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_18155 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_13520 tRNA-Met K14230 tRNA-Met; tRNA Met D D3Y57_13950 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D D3Y57_10925 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D3Y57_16100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D3Y57_05940 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D D3Y57_06280 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_17635 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_10250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_11005 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D D3Y57_16820 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D3Y57_11275 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D3Y57_09520 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D D3Y57_16935 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D D3Y57_12835 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D D3Y57_06880 tRNA-Val K14237 tRNA-Val; tRNA Val D D3Y57_06505 tRNA-Val K14237 tRNA-Val; tRNA Val D D3Y57_09770 tRNA-Val K14237 tRNA-Val; tRNA Val D D3Y57_01260 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D D3Y57_01245 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D3Y57_13510 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D D3Y57_13515 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D D3Y57_18535 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D D3Y57_18605 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D D3Y57_14555 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D D3Y57_13870 NAD-dependent epimerase/dehydratase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D D3Y57_07500 SDR family NAD(P)-dependent oxidoreductase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276] D D3Y57_02820 aldo/keto reductase K26057 smoB; 6-dehydroglucose reductase [EC:1.1.1.432] D D3Y57_03765 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D D3Y57_03760 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D D3Y57_01455 hypothetical protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D D3Y57_03440 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D D3Y57_04005 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D D3Y57_11520 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D D3Y57_09615 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D D3Y57_18460 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D D3Y57_03590 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D3Y57_17055 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D3Y57_07410 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D3Y57_01935 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D3Y57_07975 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D D3Y57_03610 nitronate monooxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D D3Y57_12115 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D D3Y57_14060 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D D3Y57_14065 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D D3Y57_10800 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D D3Y57_18435 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D D3Y57_04125 glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D D3Y57_00610 oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11] D D3Y57_04920 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D D3Y57_18725 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D D3Y57_09335 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D3Y57_11670 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D3Y57_18840 peroxiredoxin K24157 prxII; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D3Y57_00525 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D D3Y57_13000 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D D3Y57_09160 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D D3Y57_07530 taurine dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D D3Y57_07440 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D D3Y57_00620 NO-inducible flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D D3Y57_02825 LLM class flavin-dependent oxidoreductase K26058 smoC; sulfoquinovose monooxygenase [EC:1.14.14.181] D D3Y57_07510 LLM class flavin-dependent oxidoreductase K24116 scmK; N-acetyl-S-(2-succino)cysteine monooxygenase [EC:1.14.-.-] D D3Y57_10920 pyridine nucleotide-disulfide oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D D3Y57_16985 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D D3Y57_18005 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D D3Y57_18110 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D D3Y57_14135 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D D3Y57_10115 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D D3Y57_15695 methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-] D D3Y57_13075 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D D3Y57_14645 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D D3Y57_09945 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D D3Y57_16975 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D D3Y57_17625 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D D3Y57_14905 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D D3Y57_00370 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D D3Y57_18495 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D D3Y57_13885 hpnD; squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103] D D3Y57_09625 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D D3Y57_12345 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D D3Y57_09340 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D D3Y57_16655 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D D3Y57_02360 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D D3Y57_13375 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D D3Y57_03325 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D D3Y57_12665 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D D3Y57_05300 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D D3Y57_07650 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D D3Y57_03375 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D D3Y57_13070 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D D3Y57_06315 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D D3Y57_09710 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D D3Y57_09845 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D D3Y57_14745 glycosyl hydrolase family protein K16559 exoK; endo-1,3-1,4-beta-glycanase ExoK [EC:3.2.1.-] D D3Y57_18600 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D3Y57_07100 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D D3Y57_18260 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D D3Y57_04120 hypothetical protein K01462 PDF; peptide deformylase [EC:3.5.1.88] D D3Y57_17865 glycosyltransferase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D D3Y57_18985 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D D3Y57_02610 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D D3Y57_02945 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25] D D3Y57_08155 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D D3Y57_08240 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D D3Y57_15630 lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-] D D3Y57_00225 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D D3Y57_18485 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D D3Y57_18035 gamma carbonic anhydrase family protein K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-] D D3Y57_15615 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-] D D3Y57_15625 acyl dehydratase K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-] D D3Y57_13880 hpnC; squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156] D D3Y57_15090 long-chain fatty acid--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] D D3Y57_09620 AMP-dependent synthetase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D D3Y57_13665 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D D3Y57_02560 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D D3Y57_10120 ferredoxin family protein K05524 fdxA; ferredoxin D D3Y57_02105 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D D3Y57_11870 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D D3Y57_01445 cytochrome c K23275 fdhC; fructose 5-dehydrogenase cytochrome subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D D3Y57_12265 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D D3Y57_11345 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ D D3Y57_18805 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D D3Y57_03105 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D D3Y57_08290 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D D3Y57_10510 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9 D D3Y57_06375 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D D3Y57_08145 DoxX family protein K15977 K15977; putative oxidoreductase D D3Y57_04845 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D D3Y57_16955 cold shock domain-containing protein K03704 cspA; cold shock protein D D3Y57_09670 cold-shock protein K03704 cspA; cold shock protein D D3Y57_13015 cold-shock protein K03704 cspA; cold shock protein D D3Y57_11795 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D D3Y57_11700 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor C 99975 Protein processing D D3Y57_14005 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D D3Y57_05580 trigger factor K03545 tig; trigger factor D D3Y57_05985 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D D3Y57_07800 ATP-binding protein K07391 comM; magnesium chelatase family protein D D3Y57_09205 peptidase K07395 K07395; putative proteasome-type protease D D3Y57_07305 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D D3Y57_04030 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D D3Y57_18265 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D D3Y57_16150 YraN family protein K07460 yraN; putative endonuclease D D3Y57_08315 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D D3Y57_16830 replication-associated recombination protein A K07478 ycaJ; putative ATPase D D3Y57_06990 hypothetical protein K06919 K06919; putative DNA primase/helicase D D3Y57_00730 hypothetical protein K06919 K06919; putative DNA primase/helicase D D3Y57_13280 IS4/IS5 family transposase K07481 K07481; transposase, IS5 family D D3Y57_02150 hypothetical protein K07483 K07483; transposase D D3Y57_00975 hypothetical protein K07483 K07483; transposase D D3Y57_03800 hypothetical protein K07483 K07483; transposase D D3Y57_12900 hypothetical protein K07483 K07483; transposase D D3Y57_19695 hypothetical protein K07483 K07483; transposase D D3Y57_15795 IS66 family insertion sequence hypothetical protein K07483 K07483; transposase D D3Y57_15855 hypothetical protein K07483 K07483; transposase D D3Y57_03805 transposase K07484 K07484; transposase D D3Y57_03810 IS66 family transposase K07484 K07484; transposase D D3Y57_19700 transposase K07484 K07484; transposase D D3Y57_19705 IS66 family transposase K07484 K07484; transposase D D3Y57_15800 transposase K07484 K07484; transposase D D3Y57_15845 IS66 family transposase K07484 K07484; transposase D D3Y57_15850 transposase K07484 K07484; transposase D D3Y57_02145 hypothetical protein K07484 K07484; transposase D D3Y57_02155 transposase K07484 K07484; transposase D D3Y57_02160 IS66 family transposase K07484 K07484; transposase D D3Y57_00965 IS66 family transposase K07484 K07484; transposase D D3Y57_00970 transposase K07484 K07484; transposase D D3Y57_12905 transposase K07484 K07484; transposase D D3Y57_12910 IS66 family transposase K07484 K07484; transposase D D3Y57_15820 IS110 family transposase K07486 K07486; transposase D D3Y57_01970 IS110 family transposase K07486 K07486; transposase D D3Y57_01985 hypothetical protein K07497 K07497; putative transposase D D3Y57_01990 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D D3Y57_06620 pspA; phage shock protein PspA K03969 pspA; phage shock protein A D D3Y57_18545 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D D3Y57_10185 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D D3Y57_10755 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D D3Y57_13650 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D D3Y57_01360 MFS transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family D D3Y57_07200 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D D3Y57_13775 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D D3Y57_04955 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D D3Y57_11100 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D D3Y57_06600 septation protein IspZ K06190 ispZ; intracellular septation protein D D3Y57_13225 metalloendopeptidase K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D D3Y57_09550 typA; translational GTPase TypA K06207 typA; GTP-binding protein D D3Y57_00390 HPP family protein K07168 K07168; CBS domain-containing membrane protein D D3Y57_09935 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D D3Y57_13920 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D D3Y57_11055 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D D3Y57_15885 DUF560 domain-containing protein K07280 K07280; outer membrane protein D D3Y57_12545 AsmA family protein K07290 yhjG; AsmA family protein D D3Y57_13975 AsmA family protein K07290 yhjG; AsmA family protein D D3Y57_18315 NfeD family protein K07340 ybbJ; inner membrane protein D D3Y57_10325 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D D3Y57_06420 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D D3Y57_17890 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D D3Y57_06405 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D D3Y57_11740 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D D3Y57_17270 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D D3Y57_14960 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D D3Y57_08850 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D D3Y57_04985 glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D D3Y57_16315 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D D3Y57_01495 copper resistance protein B K07233 pcoB; copper resistance protein B D D3Y57_01510 periplasmic heavy metal sensor K24078 cnrR; nickel and cobalt resistance protein CnrR B B 09194 Poorly characterized C 99996 General function prediction only D D3Y57_18905 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D D3Y57_19295 glycoside hydrolase K03791 K03791; putative chitinase D D3Y57_15430 phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein D D3Y57_00605 group III truncated hemoglobin K06886 glbN; hemoglobin D D3Y57_10365 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D D3Y57_09325 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D D3Y57_10405 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D D3Y57_10390 SufD family Fe-S cluster assembly protein K09015 sufD; Fe-S cluster assembly protein SufD D D3Y57_10540 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D D3Y57_06650 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D D3Y57_17990 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D D3Y57_11605 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K04750 phnB; PhnB protein D D3Y57_07725 heme-binding protein K11477 glcG; glc operon protein GlcG D D3Y57_14540 LemA family protein K03744 lemA; LemA protein D D3Y57_00095 SHOCT domain-containing protein K08982 K08982; putative membrane protein D D3Y57_14530 hypothetical protein K08988 K08988; putative membrane protein D D3Y57_08475 DUF4142 domain-containing protein K08995 K08995; putative membrane protein D D3Y57_11085 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D D3Y57_17800 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D D3Y57_12400 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D D3Y57_14535 methanol dehydrogenase K06872 K06872; uncharacterized protein D D3Y57_08005 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D D3Y57_14470 DUF815 domain-containing protein K06923 K06923; uncharacterized protein D D3Y57_12700 CoA-binding protein K06929 K06929; uncharacterized protein D D3Y57_16125 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D D3Y57_11715 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein D D3Y57_11220 DUF2334 domain-containing protein K06986 K06986; uncharacterized protein D D3Y57_03195 VOC family protein K06996 K06996; uncharacterized protein D D3Y57_06010 VOC family protein K06996 K06996; uncharacterized protein D D3Y57_18515 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D D3Y57_08915 VOC family protein K07032 K07032; uncharacterized protein D D3Y57_03180 lactoylglutathione lyase K07032 K07032; uncharacterized protein D D3Y57_09230 metal-dependent hydrolase K07044 K07044; uncharacterized protein D D3Y57_15095 amidohydrolase K07045 K07045; uncharacterized protein D D3Y57_14415 zinc metalloprotease K07054 K07054; uncharacterized protein D D3Y57_03490 DNA-binding protein K07068 K07068; uncharacterized protein D D3Y57_03550 DNA-binding protein K07068 K07068; uncharacterized protein D D3Y57_05235 acyl dehydratase K07068 K07068; uncharacterized protein D D3Y57_15465 benzoylsuccinyl-CoA thiolase K07068 K07068; uncharacterized protein D D3Y57_01735 HEPN domain-containing protein K07076 K07076; uncharacterized protein D D3Y57_02710 HEPN domain-containing protein K07076 K07076; uncharacterized protein D D3Y57_04130 HEPN domain-containing protein K07076 K07076; uncharacterized protein D D3Y57_16855 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D3Y57_10100 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D3Y57_17240 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D D3Y57_01390 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein D D3Y57_10040 hypothetical protein K07126 K07126; uncharacterized protein D D3Y57_19370 hypothetical protein K07126 K07126; uncharacterized protein D D3Y57_00660 sel1 repeat family protein K07126 K07126; uncharacterized protein D D3Y57_00685 hypothetical protein K07126 K07126; uncharacterized protein D D3Y57_19800 hypothetical protein K07126 K07126; uncharacterized protein D D3Y57_13105 MAPEG family protein K07136 K07136; uncharacterized protein D D3Y57_00425 MAPEG family protein K07136 K07136; uncharacterized protein D D3Y57_12830 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D D3Y57_12230 ATP-dependent protease K07157 K07157; uncharacterized protein D D3Y57_07820 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D D3Y57_16960 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D D3Y57_05815 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D D3Y57_12410 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D D3Y57_09185 YqcI/YcgG family protein K09190 K09190; uncharacterized protein D D3Y57_17785 YqcI/YcgG family protein K09190 K09190; uncharacterized protein D D3Y57_14865 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D D3Y57_03715 YciI family protein K09780 K09780; uncharacterized protein D D3Y57_19845 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D D3Y57_10195 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D D3Y57_04645 BrnT family toxin K09803 K09803; uncharacterized protein D D3Y57_10335 DUF541 domain-containing protein K09807 K09807; uncharacterized protein D D3Y57_10035 N-acetyltransferase K09919 K09919; uncharacterized protein D D3Y57_10070 hypothetical protein K09922 K09922; uncharacterized protein D D3Y57_05990 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D D3Y57_04820 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D D3Y57_13735 peptidase K09939 K09939; uncharacterized protein D D3Y57_16515 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein D D3Y57_16840 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein D D3Y57_19175 DUF2213 domain-containing protein K09960 K09960; uncharacterized protein D D3Y57_19160 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein D D3Y57_09180 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D D3Y57_17790 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D D3Y57_16445 TraB/GumN family protein K09973 K09973; uncharacterized protein D D3Y57_16095 HutD family protein K09975 K09975; uncharacterized protein D D3Y57_16250 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein D D3Y57_13770 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D D3Y57_04790 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D D3Y57_04850 DUF1993 domain-containing protein K09983 K09983; uncharacterized protein D D3Y57_07185 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein D D3Y57_10720 hypothetical protein K09985 K09985; uncharacterized protein D D3Y57_08800 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D D3Y57_07940 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D D3Y57_05785 VWA domain-containing protein K09989 K09989; uncharacterized protein D D3Y57_18015 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein D D3Y57_14605 DUF448 domain-containing protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024