+E Transcription factors KO
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Transcription Factors - Sphingobacterium sp. CZ-2
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D E3D81_05185 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D E3D81_09010 helix-turn-helix domain-containing protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D E3D81_05035 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_05425 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_12430 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_00520 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_04335 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_15390 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_15420 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_16145 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D E3D81_12670 helix-turn-helix domain-containing protein K07506 K07506; AraC family transcriptional regulator
D E3D81_09840 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D E3D81_03510 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
C DeoR family
D E3D81_10950 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
C LacI family
D E3D81_00645 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_02380 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_08085 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_08180 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_13160 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_06050 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_14440 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_14455 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D E3D81_15150 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D E3D81_09395 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D E3D81_00310 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D E3D81_13800 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D E3D81_11190 TetR/AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D E3D81_06715 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D E3D81_07445 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D E3D81_05685 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
C Lrp/AsnC family
D E3D81_02590 winged helix-turn-helix transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D E3D81_12915 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D E3D81_00915 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D E3D81_14680 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
C Fur family
D E3D81_11825 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D E3D81_03885 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D E3D81_10205 transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
C CRP/FNR family
D E3D81_16715 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D E3D81_11900 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D E3D81_10575 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D E3D81_03000 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D E3D81_15790 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
C ArsR family
D E3D81_10170 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
C PadR family
D E3D81_16550 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D E3D81_05890 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D E3D81_10535 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D E3D81_09065 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D E3D81_03715 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D E3D81_03730 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D E3D81_02045 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D E3D81_00735 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D E3D81_01045 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D E3D81_04890 transcriptional regulator K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D E3D81_01400 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E3D81_08130 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D E3D81_13350 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D E3D81_01955 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D E3D81_09900 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D E3D81_13360 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D E3D81_08965 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E3D81_07785 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0