+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Sardina pilchardus (sardine)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 134072183 rnmt; (RefSeq) mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 134097853 rngtt; (RefSeq) mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 134089562 cdk7; (RefSeq) cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 134097635 cmtr1; (RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 134069248 cmtr2; (RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 134095445 RNA guanine-N7 methyltransferase activating subunit-like K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 134095839 nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 134102608 ncbp2; (RefSeq) nuclear cap-binding protein subunit 2 isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 134094264 nudt21; (RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 134071379 cpsf6; (RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 134095423 cleavage and polyadenylation specificity factor subunit 7-like isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 134069178 clp1; (RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 134079825 pcf11; (RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 134072412 cpsf1; (RefSeq) cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 134097562 cpsf2; (RefSeq) cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 134097614 cpsf3; (RefSeq) cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 134076358 cpsf4; (RefSeq) cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 134064565 fip1l1b; (RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 134102834 fip1l1a; (RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 134068830 wdr33; (RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 134092990 wdr82; (RefSeq) WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 134059396 serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 134069650 serine/threonine-protein phosphatase alpha-2 isoform-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 134076621 ppp1caa; (RefSeq) protein phosphatase 1, catalytic subunit, alpha isozyme a K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 134098099 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 134101521 ppp1cc; (RefSeq) serine/threonine-protein phosphatase PP1-gamma catalytic subunit A K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 134092534 ssu72; (RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 134091772 cstf1; (RefSeq) cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 134068681 cstf2; (RefSeq) cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 134095390 cstf3; (RefSeq) cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 134093696 sympk; (RefSeq) symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 134093032 snrpb; (RefSeq) small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 134089136 snrpd3; (RefSeq) small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 134100361 snrpd3l; (RefSeq) small nuclear ribonucleoprotein D3 polypeptide, like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 134093058 snrpe; (RefSeq) small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 134061864 snrpf; (RefSeq) small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 134088297 snrpg; (RefSeq) small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 134073055 lsm10; (RefSeq) U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 134095765 lsm11; (RefSeq) U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 134097562 cpsf2; (RefSeq) cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 134097614 cpsf3; (RefSeq) cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 134068681 cstf2; (RefSeq) cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 134093696 sympk; (RefSeq) symplekin K06100 SYMPK; symplekin
E 134058587 slbp2; (RefSeq) stem-loop binding protein 2 K18710 SLBP; histone RNA hairpin-binding protein
E 134069182 slbp; (RefSeq) histone RNA hairpin-binding protein isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 134098266 casp8ap2; (RefSeq) CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 134063666 transcription elongation factor SPT4-like K15171 SUPT4H1; transcription elongation factor SPT4
E 134080030 supt4h1; (RefSeq) transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 134099474 supt5h; (RefSeq) transcription elongation factor SPT5 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 134059459 mettl3; (RefSeq) N6-adenosine-methyltransferase subunit METTL3 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 134098065 mettl14; (RefSeq) N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 134065737 mettl4; (RefSeq) N(6)-adenine-specific methyltransferase METTL4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 134099132 mettl16; (RefSeq) RNA N6-adenosine-methyltransferase mettl16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 134098474 wtap; (RefSeq) pre-mRNA-splicing regulator WTAP K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 134083200 virma; (RefSeq) protein virilizer homolog K22910 VIRMA; protein virilizer
E 134092038 rbm15b; (RefSeq) putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 134092046 rbm15; (RefSeq) RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 134070846 zc3h13; (RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 134062393 cbll1; (RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
E 134094707 E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 134063851 papolg; (RefSeq) poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 134097494 papola; (RefSeq) poly(A) polymerase alpha isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 134088772 tent2; (RefSeq) poly(A) RNA polymerase GLD2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 134077147 tut1; (RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 134077975 bard1; (RefSeq) BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 134071081 rbm26; (RefSeq) RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
E 134095146 fto; (RefSeq) alpha-ketoglutarate-dependent dioxygenase FTO K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 134080382 alkbh5; (RefSeq) RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 134087889 tardbpa; (RefSeq) TAR DNA binding protein, like isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
E 134091895 tardbpb; (RefSeq) TAR DNA-binding protein 43 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 134099755 dhx40; (RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 134061769 kin; (RefSeq) DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 134078757 mettl8; (RefSeq) mRNA N(3)-methylcytidine methyltransferase METTL8 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 134077195 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 134077198 mettl22; (RefSeq) methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 134072816 tent5bb; (RefSeq) terminal nucleotidyltransferase 5Bb K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 134082649 tent5aa; (RefSeq) terminal nucleotidyltransferase 5A K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 134083106 tent5ba; (RefSeq) terminal nucleotidyltransferase 5ba K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 134098240 terminal nucleotidyltransferase 5A-like K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 134078488 tent5c; (RefSeq) terminal nucleotidyltransferase 5C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 134068542 terminal nucleotidyltransferase 5C-like K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 134097989 zc3h14; (RefSeq) zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 134071786 serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule
D 134080112 srrt; (RefSeq) serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 134082807 rbm8a; (RefSeq) RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 134102655 magoh; (RefSeq) protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 134069770 alyref; (RefSeq) THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 134094037 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 134072467 ddx39b; (RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 134082855 eif4a3; (RefSeq) eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 134091818 ccdc174; (RefSeq) coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 134077257 casc3; (RefSeq) protein CASC3 isoform X1 K14323 CASC3; protein CASC3
E 134078501 sap18; (RefSeq) histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 134067701 pnn; (RefSeq) pinin K13114 PNN; pinin
E 134059928 acin1b; (RefSeq) apoptotic chromatin condensation inducer 1b isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 134070278 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 134077086 RNA-binding protein with serine-rich domain 1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 134068184 srrm1; (RefSeq) serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 134072957 thoc1; (RefSeq) THO complex subunit 1 K12878 THOC1; THO complex subunit 1
E 134068528 thoc2; (RefSeq) THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 134069224 thoc3; (RefSeq) THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 134069770 alyref; (RefSeq) THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 134094037 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 134059431 thoc5; (RefSeq) THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 134076913 thoc6; (RefSeq) THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 134092798 thoc7; (RefSeq) THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
E 134072917 chtopa; (RefSeq) chromatin target of PRMT1a isoform X1 K28424 CHTOP; chromatin target of PRMT1 protein
E 134082609 chtopb; (RefSeq) chromatin target of PRMT1b K28424 CHTOP; chromatin target of PRMT1 protein
D TREX-2 complex
E 134071202 pcid2; (RefSeq) PCI domain-containing protein 2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 134072507 sem1; (RefSeq) 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 134072594 transcription and mRNA export factor ENY2-2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 134082033 eny2; (RefSeq) transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 134069072 cetn2; (RefSeq) uncharacterized protein cetn2 K10840 CETN2; centrin-2
E 134100490 cetn3; (RefSeq) centrin-3 K16466 CETN3; centrin-3
E 134078527 mcm3ap; (RefSeq) germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 134102068 tprb; (RefSeq) translocated promoter region b, nuclear basket protein K09291 TPR; nucleoprotein TPR
E 134092840 rae1; (RefSeq) mRNA export factor isoform X1 K14298 RAE1; mRNA export factor
E 134093094 sec13; (RefSeq) protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 134062537 nup37; (RefSeq) LOW QUALITY PROTEIN: nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 134076924 nup85; (RefSeq) nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85
E 134097367 nup43; (RefSeq) nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 134062597 nup50; (RefSeq) nuclear pore complex protein Nup50 isoform X1 K14295 NUP50; nuclear pore complex protein Nup50
E 134100885 nup54; (RefSeq) nucleoporin p54 isoform X1 K14308 NUP54; nuclear pore complex protein Nup54
E 134069083 nup62l; (RefSeq) nucleoporin 62 like K14306 NUP62; nuclear pore complex protein Nup62
E 134072417 nucleoporin 88-like K14318 NUP88; nuclear pore complex protein Nup88
E 134079748 nup88; (RefSeq) LOW QUALITY PROTEIN: nucleoporin 88 K14318 NUP88; nuclear pore complex protein Nup88
E 134094253 nup93; (RefSeq) nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 134072262 nup98; (RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 134071344 nup107; (RefSeq) nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 134095456 nup133; (RefSeq) nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 134100656 nup188; (RefSeq) nucleoporin NUP188 K14311 NUP188; nuclear pore complex protein Nup188
E 134072206 nup153; (RefSeq) nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 134071674 nup155; (RefSeq) nuclear pore complex protein Nup155 K14312 NUP155; nuclear pore complex protein Nup155
E 134093883 nup160; (RefSeq) nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 134078339 nup35; (RefSeq) nucleoporin NUP35 K14313 NUP35; nuclear pore complex protein Nup53
E 134093448 nup205; (RefSeq) nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 134083416 nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 134087474 nup210; (RefSeq) nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 134101021 nup214; (RefSeq) nuclear pore complex protein Nup214 isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 134080531 pom121; (RefSeq) nuclear envelope pore membrane protein POM 121 K14316 POM121; nuclear pore complex protein Nup121
E 134065672 nup58; (RefSeq) LOW QUALITY PROTEIN: nucleoporin p58/p45 K14307 NUPL1; nucleoporin p58/p45
E 134073006 nup42; (RefSeq) nucleoporin NUP42 K14321 NUPL2; nucleoporin-like protein 2
E 134065936 ndc1; (RefSeq) nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 134072184 seh1l; (RefSeq) nucleoporin SEH1 K14299 SEH1; nucleoporin SEH1
E 134078605 ranbp2; (RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 134071089 senp2; (RefSeq) sentrin-specific protease 2 isoform X1 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 134076419 aaas; (RefSeq) aladin K14320 AAAS; aladin
E 134100490 cetn3; (RefSeq) centrin-3 K16466 CETN3; centrin-3
E 134088395 gle1; (RefSeq) mRNA export factor GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1
E 134080326 nxf1b; (RefSeq) nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 134095568 nuclear RNA export factor 1-like isoform X1 K14284 NXF; nuclear RNA export factor
E 134068807 nxt2; (RefSeq) NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 134066112 GTP-binding nuclear protein Ran-like K07936 RAN; GTP-binding nuclear protein Ran
E 134068843 ran; (RefSeq) GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 134094551 acidic leucine-rich nuclear phosphoprotein 32 family member A-like isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 134095441 anp32a; (RefSeq) acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 134075177 anp32b; (RefSeq) acidic leucine-rich nuclear phosphoprotein 32 family member B K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 134079489 tnfsf13; (RefSeq) tumor necrosis factor ligand superfamily member 13 isoform X1 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 134074948 elavl1a; (RefSeq) ELAV-like protein 1a isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 134101790 elavl1b; (RefSeq) ELAV-like protein 1b isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 134060125 elavl2; (RefSeq) ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 134076230 elavl3; (RefSeq) ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 134102562 elavl4; (RefSeq) ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 134069020 faf2; (RefSeq) FAS-associated factor 2 K18726 FAF2; FAS-associated factor 2
E 134088799 vcp; (RefSeq) transitional endoplasmic reticulum ATPase isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
E 134067343 vcpkmt; (RefSeq) protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 134070660 LOW QUALITY PROTEIN: transportin-2-like K18727 TNPO2; transportin-2
E 134095319 tnpo2b; (RefSeq) transportin-2 isoform X1 K18727 TNPO2; transportin-2
E 134063539 xpo1b; (RefSeq) exportin-1 isoform X1 K14290 XPO1; exportin-1
E 134089837 xpo1a; (RefSeq) exportin-1 isoform X1 K14290 XPO1; exportin-1
E 134100853 xpo7; (RefSeq) exportin-7 isoform X1 K18460 XPO7; exportin-7
E 134070212 rangap1b; (RefSeq) ran GTPase-activating protein 1b K14319 RANGAP1; Ran GTPase-activating protein 1
E 134076651 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 134059444 eukaryotic translation initiation factor 4E-1B-like K03259 EIF4E; translation initiation factor 4E
E 134060163 eif4e2rs1; (RefSeq) eukaryotic translation initiation factor 4E family member 2 related sequence 1 K03259 EIF4E; translation initiation factor 4E
E 134062561 eif4e2; (RefSeq) eukaryotic translation initiation factor 4E type 2 K03259 EIF4E; translation initiation factor 4E
E 134063984 eif4e1c; (RefSeq) eukaryotic translation initiation factor 4E family member 1c isoform X1 K03259 EIF4E; translation initiation factor 4E
E 134067041 eif4eb; (RefSeq) eukaryotic translation initiation factor 4eb K03259 EIF4E; translation initiation factor 4E
E 134095760 eif4ea; (RefSeq) eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E
E 134059404 eif4a1a; (RefSeq) eukaryotic translation initiation factor 4A1A K03257 EIF4A; translation initiation factor 4A
E 134074752 eif4a2; (RefSeq) eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 134102238 eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 134068377 eif4g2a; (RefSeq) eukaryotic translation initiation factor 4 gamma 2a isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134069134 eif4g1a; (RefSeq) eukaryotic translation initiation factor 4 gamma 1a isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134087101 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134092915 eif4g3a; (RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134093427 eif4g2b; (RefSeq) eukaryotic translation initiation factor 4 gamma 2b K03260 EIF4G; translation initiation factor 4G
E 134099284 eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G
E 134087561 eif4ba; (RefSeq) eukaryotic translation initiation factor 4Ba isoform X1 K03258 EIF4B; translation initiation factor 4B
E 134093024 eukaryotic translation initiation factor 4B-like isoform X1 K03258 EIF4B; translation initiation factor 4B
E 134100262 eif4h; (RefSeq) eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H
E 134100800 eif4ebp1; (RefSeq) eukaryotic translation initiation factor 4E-binding protein 1 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 134063564 eif4ebp2; (RefSeq) eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 134068356 eif4ebp3l; (RefSeq) eukaryotic translation initiation factor 4E-binding protein 3-like isoform X1 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 134080363 eukaryotic translation initiation factor 4E-binding protein 3-like K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 134092965 eif4enif1; (RefSeq) eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 134068101 angel1; (RefSeq) protein angel homolog 1 isoform X1 K18729 ANGEL; protein angel
E 134098346 angel2; (RefSeq) protein angel homolog 2 isoform X1 K18729 ANGEL; protein angel
E 134059405 fxr2; (RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 134101820 fxr1; (RefSeq) RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 134068341 cyfip2; (RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 134101646 cyfip1; (RefSeq) cytoplasmic FMR1-interacting protein 1 homolog K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 134080680 gemin5; (RefSeq) gem-associated protein 5 K13133 GEMIN5; gem associated protein 5
E 134067720 tacc3; (RefSeq) transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 134063497 cpeb3; (RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134068458 cpeb4a; (RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134080513 cpeb4b; (RefSeq) cytoplasmic polyadenylation element-binding protein 4b isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134096041 cpeb1b; (RefSeq) cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134102191 cpeb2; (RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134071402 putative ATP-dependent RNA helicase an3 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 134078371 ddx3xa; (RefSeq) DEAD-box helicase 3 X-linked a isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 134059600 gigyf1a; (RefSeq) GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 134068354 gigyf2; (RefSeq) GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 134080820 GRB10-interacting GYF protein 1-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 134067469 pabpc4; (RefSeq) polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
E 134073260 pabpc1b; (RefSeq) polyadenylate-binding protein 1b K13126 PABPC; polyadenylate-binding protein
E 134082669 polyadenylate-binding protein 1A-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 134087075 embryonic polyadenylate-binding protein B-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 134088743 paip1; (RefSeq) polyadenylate-binding protein-interacting protein 1 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 134060237 polyadenylate-binding protein-interacting protein 2B-like isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 134063721 paip2b; (RefSeq) polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 134069054 polyadenylate-binding protein-interacting protein 2-like K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 134073058 skic2; (RefSeq) helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 134094530 deaf1; (RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 134068669 mcts1; (RefSeq) malignant T-cell-amplified sequence 1 K07575 MCTS; malignant T-cell-amplified sequence
E 134100434 denr; (RefSeq) density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 134070126 a1cf; (RefSeq) APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 134087541 pym1; (RefSeq) partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 134078155 hnrnpa3; (RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 134087608 hnrnpa1b; (RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 134092569 hnrnpa1a; (RefSeq) heterogeneous nuclear ribonucleoprotein A1a isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 134080759 RNA-binding protein Musashi homolog 2 K14411 MSI; RNA-binding protein Musashi
E 134088539 msi1b; (RefSeq) RNA-binding protein Musashi homolog 1b isoform X1 K14411 MSI; RNA-binding protein Musashi
E 134099119 msi2b; (RefSeq) RNA-binding protein Musashi homolog 2b isoform X1 K14411 MSI; RNA-binding protein Musashi
E 134100636 RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 134102729 dazap1; (RefSeq) DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 134097303 hbs1l; (RefSeq) HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 134070283 pelo; (RefSeq) protein pelota homolog K06965 PELO; protein pelota
E 134065628 pabpn1; (RefSeq) polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 134095887 pabpn1l; (RefSeq) embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 134087586 ddx19a; (RefSeq) ATP-dependent RNA helicase DDX19A isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 134092507 ddx19b; (RefSeq) ATP-dependent RNA helicase DDX19B K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 134077326 xab2; (RefSeq) pre-mRNA-splicing factor SYF1 isoform X1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 134092845 sarnp; (RefSeq) SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein
E 134083109 rcc1; (RefSeq) regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 134095199 larp6a; (RefSeq) la-related protein 6a K18733 LARP6; la-related protein 6
E 134101007 la-related protein 6-like K18733 LARP6; la-related protein 6
E 134102076 larp6b; (RefSeq) la-related protein 6b K18733 LARP6; la-related protein 6
E 134080341 puraa; (RefSeq) purine-rich element binding protein Aa K21772 PURA; transcriptional activator protein Pur-alpha
E 134096111 purab; (RefSeq) transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 134088532 transcriptional activator protein Pur-beta-like K21799 PURB; transcriptional activator protein Pur-beta
E 134100524 purbb; (RefSeq) transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 134076771 poldip3; (RefSeq) polymerase delta-interacting protein 3 K22414 POLDIP3; polymerase delta-interacting protein 3
E 134093056 zc3h11a; (RefSeq) zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 134083243 leng8; (RefSeq) leukocyte receptor cluster member 8 homolog isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
E 134070720 protein PAT1 homolog 2-like K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 134069344 etf1a; (RefSeq) eukaryotic peptide chain release factor subunit 1-like K03265 ETF1; peptide chain release factor subunit 1
E 134080446 eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 134070696 gspt1; (RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 134077226 gspt1l; (RefSeq) G1 to S phase transition 1, like K03267 ERF3; peptide chain release factor subunit 3
E 134066876 upf1; (RefSeq) regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 134102697 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 134061912 upf2; (RefSeq) regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 134068897 upf3b; (RefSeq) regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
E 134078358 upf3a; (RefSeq) regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 134068956 ppp2caa; (RefSeq) protein phosphatase 2 catalytic subunit alpha a K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 134079902 ppp2cab; (RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 134100539 ppp2cb; (RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 134065727 ppp2r1bb; (RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 134079951 ppp2r1ba; (RefSeq) protein phosphatase 2, regulatory subunit A, beta a K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 134070415 ppp2r2d; (RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 134080479 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 134088445 ppp2r2aa; (RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 134100869 ppp2r2ab; (RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 134101000 ppp2r2ca; (RefSeq) protein phosphatase 2, regulatory subunit B, gamma a K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 134064222 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 134067505 ppp2r3c; (RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 134078364 ppp2r3b; (RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 134060432 ppp2r5b; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 134063462 ppp2r5d; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 134067208 ppp2r5ca; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 134067241 ppp2r5eb; (RefSeq) protein phosphatase 2, regulatory subunit B', epsilon isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 134097515 ppp2r5a; (RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 134097542 ppp2r5ea; (RefSeq) protein phosphatase 2, regulatory subunit B', epsilon isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 134098558 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 134077217 smg1; (RefSeq) serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 134082779 smg5; (RefSeq) nonsense-mediated mRNA decay factor SMG5 K11125 SMG5; protein SMG5
E 134079830 smg6; (RefSeq) telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 134071200 smg7; (RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1 K14409 SMG7; protein SMG7
E 134070954 smg8; (RefSeq) nonsense-mediated mRNA decay factor SMG8 K18734 SMG8; protein SMG8
E 134082879 smg9; (RefSeq) nonsense-mediated mRNA decay factor SMG9 K18735 SMG9; protein SMG9
E 134059600 gigyf1a; (RefSeq) GRB10-interacting GYF protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 134068354 gigyf2; (RefSeq) GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 134080820 GRB10-interacting GYF protein 1-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 134089319 selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 134095204 secisbp2l; (RefSeq) selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 134099332 dhx34; (RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 134076586 gtpbp1; (RefSeq) GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1
E 134090313 gtpbp1l; (RefSeq) GTP binding protein 1, like K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 134071392 pum3; (RefSeq) pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
E 134093484 myo5ab; (RefSeq) unconventional myosin-Va K10357 MYO5; myosin V
E 134094523 myo5c; (RefSeq) unconventional myosin-Vc K10357 MYO5; myosin V
E 134095241 myo5aa; (RefSeq) unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 134101523 myo5b; (RefSeq) unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 134101601 si:dkey-110c1.10; (RefSeq) unconventional myosin-Vb K10357 MYO5; myosin V
E 134062006 protein bicaudal D homolog 1-like K18739 BICD; protein bicaudal D
E 134087939 zgc:162200; (RefSeq) protein bicaudal D homolog 2 K18739 BICD; protein bicaudal D
E 134092456 bicd2; (RefSeq) protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 134093828 bicd1a; (RefSeq) protein bicaudal D homolog 1 K18739 BICD; protein bicaudal D
D Factors that have mRNA localization signals
E 134076379 actb2; (RefSeq) actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 134080514 actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 134080775 actin, cytoplasmic 1-like K05692 ACTB_G1; actin beta/gamma 1
E 134080865 actin, cytoplasmic 1-like K05692 ACTB_G1; actin beta/gamma 1
E 134080876 actin, cytoplasmic 1-like isoform X1 K05692 ACTB_G1; actin beta/gamma 1
E 134072765 mbpa; (RefSeq) myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 134082573 myelin basic protein-like K17269 MBP; myelin basic protein
E 134082574 mbpb; (RefSeq) myelin basic protein b isoform X1 K17269 MBP; myelin basic protein
E 134061196 viml; (RefSeq) vimentin like K07606 VIM; vimentin
E 134065779 vim; (RefSeq) vimentin K07606 VIM; vimentin
E 134066072 vimentin-like K07606 VIM; vimentin
E 134100400 desmin-like K07606 VIM; vimentin
E 134100401 vimentin-like K07606 VIM; vimentin
E 134100402 vimentin-like K07606 VIM; vimentin
E 134101237 desmin-like K07606 VIM; vimentin
E 134101356 vimentin-like K07606 VIM; vimentin
E 134094247 mt2; (RefSeq) metallothionein-2 K14739 MT1_2; metallothionein 1/2
E 134066071 myca; (RefSeq) transcriptional regulator Myc-A K04377 MYC; Myc proto-oncogene protein
E 134069871 mycb; (RefSeq) transcriptional regulator Myc-B K04377 MYC; Myc proto-oncogene protein
E 134075953 tbx6; (RefSeq) T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 134088472 tbx16; (RefSeq) T-box transcription factor 16 K10180 TBX6; T-box protein 6
E 134101290 T-box-containing protein TBX6L-like K10180 TBX6; T-box protein 6
E 134096042 nanos1; (RefSeq) nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 134070854 fubp1; (RefSeq) far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
E 134073802 far upstream element-binding protein 2-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 134077495 far upstream element-binding protein 2-like K13210 FUBP; far upstream element-binding protein
E 134082783 far upstream element-binding protein 2-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 134100350 fubp3; (RefSeq) far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 134063634 eef1a1a; (RefSeq) elongation factor 1-alpha 1a K03231 EEF1A; elongation factor 1-alpha
E 134066077 eef1a1l3; (RefSeq) elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 134073062 elongation factor 1-alpha, somatic form-like K03231 EEF1A; elongation factor 1-alpha
E 134073063 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 134087787 eef1a2; (RefSeq) elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 134090164 eef1a1b; (RefSeq) elongation factor 1-alpha 1b K03231 EEF1A; elongation factor 1-alpha
E 134068434 eef1g; (RefSeq) elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 134072408 hax1; (RefSeq) HCLS1-associated protein X-1 K16220 HAX1; HCLS1-associated protein X-1
E 134059670 agfg2; (RefSeq) arf-GAP domain and FG repeat-containing protein 2 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 134068999 agfg1b; (RefSeq) arf-GAP domain and FG repeat-containing protein 1b isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 134099330 agfg1a; (RefSeq) arf-GAP domain and FG repeat-containing protein 1a isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 134065913 stau2; (RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 134092634 stau1; (RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 134072847 igf2bp3; (RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 134064318 ptbp1a; (RefSeq) polypyrimidine tract-binding protein 1a isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 134063497 cpeb3; (RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134068458 cpeb4a; (RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134080513 cpeb4b; (RefSeq) cytoplasmic polyadenylation element-binding protein 4b isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134096041 cpeb1b; (RefSeq) cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134102191 cpeb2; (RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 134059405 fxr2; (RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 134101820 fxr1; (RefSeq) RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 134068341 cyfip2; (RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 134101646 cyfip1; (RefSeq) cytoplasmic FMR1-interacting protein 1 homolog K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 134092753 pcbp2; (RefSeq) poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 134063476 zgc:110045; (RefSeq) poly(rC)-binding protein 3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 134071209 poly(rC)-binding protein 3-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 134078318 pcbp3; (RefSeq) poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 134092035 pcbp4; (RefSeq) poly(rC)-binding protein 4 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 134068651 caprin-1-like isoform X1 K18743 CAPRIN1; caprin-1
E 134093832 caprin1b; (RefSeq) caprin-1b isoform X1 K18743 CAPRIN1; caprin-1
E 134062637 caprin2; (RefSeq) caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 134087358 ybx1; (RefSeq) Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 134069058 xrn1; (RefSeq) 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 134072229 ago4; (RefSeq) protein argonaute-4 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 134072400 ago2; (RefSeq) protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 134073045 ago3b; (RefSeq) protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 134082696 protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 134082697 ago1; (RefSeq) protein argonaute-1 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 134059444 eukaryotic translation initiation factor 4E-1B-like K03259 EIF4E; translation initiation factor 4E
E 134060163 eif4e2rs1; (RefSeq) eukaryotic translation initiation factor 4E family member 2 related sequence 1 K03259 EIF4E; translation initiation factor 4E
E 134062561 eif4e2; (RefSeq) eukaryotic translation initiation factor 4E type 2 K03259 EIF4E; translation initiation factor 4E
E 134063984 eif4e1c; (RefSeq) eukaryotic translation initiation factor 4E family member 1c isoform X1 K03259 EIF4E; translation initiation factor 4E
E 134067041 eif4eb; (RefSeq) eukaryotic translation initiation factor 4eb K03259 EIF4E; translation initiation factor 4E
E 134095760 eif4ea; (RefSeq) eukaryotic translation initiation factor 4E-1A K03259 EIF4E; translation initiation factor 4E
E 134066876 upf1; (RefSeq) regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 134102697 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 134071402 putative ATP-dependent RNA helicase an3 isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 134078371 ddx3xa; (RefSeq) DEAD-box helicase 3 X-linked a isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 134072149 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 134082919 ddx61; (RefSeq) probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 134099025 ddx6; (RefSeq) probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 134063549 RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 134082081 mex3a; (RefSeq) RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 134088816 RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 134096089 mex3b; (RefSeq) RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 134070016 fastk; (RefSeq) fas-activated serine/threonine kinase K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 134087911 lsm14b; (RefSeq) protein LSM14 homolog B K18749 LSM14; protein LSM14
E 134096281 protein LSM14 homolog A-like isoform X1 K18749 LSM14; protein LSM14
E 134092753 pcbp2; (RefSeq) poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 134087358 ybx1; (RefSeq) Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
E 134059929 ajuba; (RefSeq) LIM domain-containing protein ajuba K16682 AJUBA; LIM domain-containing protein
E 134082450 Wilms tumor protein 1-interacting protein-like K16682 AJUBA; LIM domain-containing protein
E 134095440 wtip; (RefSeq) Wilms tumor protein 1-interacting protein homolog K16682 AJUBA; LIM domain-containing protein
E 134087328 putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 134087332 LOW QUALITY PROTEIN: putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 134093103 mov10a; (RefSeq) putative helicase mov-10-B.2 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 134083165 pnrc2; (RefSeq) proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 134100956 tnpo1; (RefSeq) transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 134077217 smg1; (RefSeq) serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 134082779 smg5; (RefSeq) nonsense-mediated mRNA decay factor SMG5 K11125 SMG5; protein SMG5
E 134079830 smg6; (RefSeq) telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 134071200 smg7; (RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1 K14409 SMG7; protein SMG7
E 134063544 zfp36l2; (RefSeq) mRNA decay activator protein ZFP36L2 K18753 ZFP36L; butyrate response factor
E 134067151 zfp36l1a; (RefSeq) mRNA decay activator protein ZFP36L1a K18753 ZFP36L; butyrate response factor
E 134097489 mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 134099639 zgc:114130; (RefSeq) mRNA decay activator protein ZFP36L1 isoform X1 K18753 ZFP36L; butyrate response factor
E 134099782 sb:cb81; (RefSeq) mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 134073252 lin28ab; (RefSeq) protein lin-28 homolog A isoform X1 K18754 LIN28; protein lin-28
E 134082153 lin28aa; (RefSeq) protein lin-28 homolog A K18754 LIN28; protein lin-28
E 134083427 protein lin-28 homolog B-like K18754 LIN28; protein lin-28
E 134097445 lin28b; (RefSeq) protein lin-28 homolog B K18754 LIN28; protein lin-28
E 134064937 htt; (RefSeq) huntingtin isoform X1 K04533 HD; huntingtin
E 134062360 ipo8; (RefSeq) importin-8 isoform X1 K18755 IPO8; importin-8
E 134064485 protein bicaudal C homolog 1-like K18756 BICC1; protein bicaudal C
E 134068602 bicc2; (RefSeq) bicaudal C homolog 2 K18756 BICC1; protein bicaudal C
E 134070338 protein bicaudal C homolog 1-like isoform X1 K18756 BICC1; protein bicaudal C
E 134078155 hnrnpa3; (RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 134087608 hnrnpa1b; (RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 134092569 hnrnpa1a; (RefSeq) heterogeneous nuclear ribonucleoprotein A1a isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 134074172 prkacbb; (RefSeq) protein kinase, cAMP-dependent, catalytic, beta b isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 134077568 prkacaa; (RefSeq) protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 134101807 prkacba; (RefSeq) protein kinase, cAMP-dependent, catalytic, beta a isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 134067028 larp1b; (RefSeq) la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1
E 134080641 larp1; (RefSeq) la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 134060422 atxn2; (RefSeq) ataxin-2 isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 134069640 atxn2l; (RefSeq) ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 134100817 dcp2; (RefSeq) m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 134087877 dcp1a; (RefSeq) mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 134062414 dcp1b; (RefSeq) mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 134089077 lsm1; (RefSeq) U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 134102578 smx5; (RefSeq) smx5 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 134092072 lsm3; (RefSeq) snRNA-associated Sm-like protein LSm3 isoform X1 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 134102699 lsm4; (RefSeq) U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 134065945 lsm5; (RefSeq) U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 134100212 lsm6; (RefSeq) U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 134102064 lsm7; (RefSeq) U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 134061941 lsm8; (RefSeq) LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 134060383 kinesin light chain 2-like isoform X1 K10407 KLC; kinesin light chain
E 134063824 klc1b; (RefSeq) kinesin light chain 1b isoform X1 K10407 KLC; kinesin light chain
E 134067324 klc1a; (RefSeq) kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 134089895 kinesin light chain 1-like isoform X1 K10407 KLC; kinesin light chain
E 134093484 myo5ab; (RefSeq) unconventional myosin-Va K10357 MYO5; myosin V
E 134094523 myo5c; (RefSeq) unconventional myosin-Vc K10357 MYO5; myosin V
E 134095241 myo5aa; (RefSeq) unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 134101523 myo5b; (RefSeq) unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 134101601 si:dkey-110c1.10; (RefSeq) unconventional myosin-Vb K10357 MYO5; myosin V
E 134070939 si:ch211-114n24.6; (RefSeq) tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 134070940 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 134071462 tuba8l2; (RefSeq) tubulin, alpha 8 like 2 K07374 TUBA; tubulin alpha
E 134078740 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 134078747 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha
E 134078748 tubulin alpha chain K07374 TUBA; tubulin alpha
E 134087349 tuba5; (RefSeq) tubulin alpha 5 K07374 TUBA; tubulin alpha
E 134087435 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha
E 134087436 tubulin alpha-1A chain isoform X1 K07374 TUBA; tubulin alpha
E 134092849 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 134092850 tubulin alpha-1C chain K07374 TUBA; tubulin alpha
E 134092851 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 134097548 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 134098543 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 134098546 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 134098547 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 134100415 tuba7l; (RefSeq) tubulin, alpha 7 like K07374 TUBA; tubulin alpha
E 134063497 cpeb3; (RefSeq) cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134068458 cpeb4a; (RefSeq) cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134080513 cpeb4b; (RefSeq) cytoplasmic polyadenylation element-binding protein 4b isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134096041 cpeb1b; (RefSeq) cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134102191 cpeb2; (RefSeq) cytoplasmic polyadenylation element-binding protein 2 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 134080680 gemin5; (RefSeq) gem-associated protein 5 K13133 GEMIN5; gem associated protein 5
E 134067720 tacc3; (RefSeq) transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 134069706 tnrc6ba; (RefSeq) trinucleotide repeat-containing gene 6B protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 134075877 trinucleotide repeat-containing gene 6B protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 134077492 tnrc6c1; (RefSeq) trinucleotide repeat-containing gene 6C protein K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 134077639 LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6A protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 134094146 tnrc6c2; (RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 134094759 cnot1; (RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 134062197 CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 134094686 cnot2; (RefSeq) CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 134072657 cnot3b; (RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 134082447 cnot3a; (RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 134061851 cnot4b; (RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 134093635 cnot4a; (RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 134080381 cnot6a; (RefSeq) CCR4-NOT transcription complex subunit 6a K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 134089008 cnot6l; (RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 134068685 cnot7; (RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 134080683 cnot8; (RefSeq) CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 134095474 granule associated Rac and RHOG effector protein 1-like isoform X1 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 134062529 dis3l2; (RefSeq) DIS3-like exonuclease 2 isoform X1 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 134087574 pan2; (RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 134065970 pan3; (RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 134062480 btg1; (RefSeq) protein BTG1 K14443 TOB; protein Tob/BTG
E 134069815 tob1b; (RefSeq) protein Tob1b K14443 TOB; protein Tob/BTG
E 134072188 btg4; (RefSeq) protein BTG4 K14443 TOB; protein Tob/BTG
E 134076644 protein Tob2 K14443 TOB; protein Tob/BTG
E 134077538 tob1a; (RefSeq) protein Tob1a K14443 TOB; protein Tob/BTG
E 134079651 maternal B9.10 protein-like K14443 TOB; protein Tob/BTG
E 134082874 si:dkey-79d12.5; (RefSeq) protein BTG3 isoform X1 K14443 TOB; protein Tob/BTG
E 134088227 si:dkey-42i9.4; (RefSeq) protein BTG1 K14443 TOB; protein Tob/BTG
E 134092954 btg2; (RefSeq) protein BTG2 K14443 TOB; protein Tob/BTG
E 134096135 protein BTG3-like K14443 TOB; protein Tob/BTG
E 134092965 eif4enif1; (RefSeq) eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 134072208 patl1; (RefSeq) protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 134094397 edc3; (RefSeq) enhancer of mRNA-decapping protein 3 isoform X1 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 134096256 enhancer of mRNA-decapping protein 3-like isoform X1 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 134093632 edc4; (RefSeq) enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 134065354 nanos3; (RefSeq) nanos homolog 3 K18761 NANOS3; protein nanos 3
E 134061912 upf2; (RefSeq) regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 134068897 upf3b; (RefSeq) regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
E 134078358 upf3a; (RefSeq) regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 134083328 trim71; (RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 134069247 polr2g; (RefSeq) DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 134063467 interferon-induced, double-stranded RNA-activated protein kinase-like isoform X1 K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 134101856 zar1; (RefSeq) zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 134065826 ythdf3; (RefSeq) YTH domain-containing family protein 3 K20102 YTHDF; YTH domain-containing family protein
E 134067378 ythdf2; (RefSeq) YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
E 134087765 ythdf1; (RefSeq) YTH domain-containing family protein 1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 134088038 YTH domain-containing family protein 1-like isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 134064240 tial1; (RefSeq) nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 134088922 cytotoxic granule associated RNA binding protein TIA1-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 134100523 tia1; (RefSeq) nucleolysin TIA-1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 134067469 pabpc4; (RefSeq) polyadenylate-binding protein 4 K13126 PABPC; polyadenylate-binding protein
E 134073260 pabpc1b; (RefSeq) polyadenylate-binding protein 1b K13126 PABPC; polyadenylate-binding protein
E 134082669 polyadenylate-binding protein 1A-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 134087075 embryonic polyadenylate-binding protein B-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 134065913 stau2; (RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 134092634 stau1; (RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 134059405 fxr2; (RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 134101820 fxr1; (RefSeq) RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 134074948 elavl1a; (RefSeq) ELAV-like protein 1a isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 134101790 elavl1b; (RefSeq) ELAV-like protein 1b isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 134068858 g3bp1; (RefSeq) ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 134059682 g3bp2b; (RefSeq) ras GTPase-activating protein-binding protein 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 134075158 g3bp2a; (RefSeq) ras GTPase-activating protein-binding protein 2 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 134099356 eif2a; (RefSeq) eukaryotic translation initiation factor 2A K15026 EIF2A; translation initiation factor 2A
E 134075412 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 134077375 eif3ba; (RefSeq) eukaryotic translation initiation factor 3, subunit Ba K03253 EIF3B; translation initiation factor 3 subunit B
E 134059404 eif4a1a; (RefSeq) eukaryotic translation initiation factor 4A1A K03257 EIF4A; translation initiation factor 4A
E 134074752 eif4a2; (RefSeq) eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 134102238 eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 134082855 eif4a3; (RefSeq) eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 134087561 eif4ba; (RefSeq) eukaryotic translation initiation factor 4Ba isoform X1 K03258 EIF4B; translation initiation factor 4B
E 134093024 eukaryotic translation initiation factor 4B-like isoform X1 K03258 EIF4B; translation initiation factor 4B
E 134068377 eif4g2a; (RefSeq) eukaryotic translation initiation factor 4 gamma 2a isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134069134 eif4g1a; (RefSeq) eukaryotic translation initiation factor 4 gamma 1a isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134087101 eukaryotic translation initiation factor 4 gamma 3-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134092915 eif4g3a; (RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 134093427 eif4g2b; (RefSeq) eukaryotic translation initiation factor 4 gamma 2b K03260 EIF4G; translation initiation factor 4G
E 134099284 eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G
E 134064305 rps6ka2; (RefSeq) ribosomal protein S6 kinase alpha-2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 134066231 rps6ka3b; (RefSeq) ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 134067376 rps6ka1; (RefSeq) ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 134069478 rps6kal; (RefSeq) ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 134080618 ribosomal protein S6 kinase alpha-3-like K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 134068462 rack1; (RefSeq) small ribosomal subunit protein RACK1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 134089520 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 134100663 TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 134101088 traf2b; (RefSeq) TNF receptor-associated factor 2 isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 134080326 nxf1b; (RefSeq) nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 134095568 nuclear RNA export factor 1-like isoform X1 K14284 NXF; nuclear RNA export factor
E 134087700 hdac6; (RefSeq) histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 134071271 tdrd3; (RefSeq) tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3
E 134058645 la-related protein 4B-like isoform X1 K18763 LARP4; la-related protein 4
E 134065619 larp4b; (RefSeq) la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
E 134087658 larp4aa; (RefSeq) la ribonucleoprotein 4Aa isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 134087877 dcp1a; (RefSeq) mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 134062414 dcp1b; (RefSeq) mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 134100817 dcp2; (RefSeq) m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 134072149 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 134082919 ddx61; (RefSeq) probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 134099025 ddx6; (RefSeq) probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 134094397 edc3; (RefSeq) enhancer of mRNA-decapping protein 3 isoform X1 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 134096256 enhancer of mRNA-decapping protein 3-like isoform X1 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 134093632 edc4; (RefSeq) enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 134072208 patl1; (RefSeq) protein PAT1 homolog 1 isoform X1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 134089077 lsm1; (RefSeq) U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 134102578 smx5; (RefSeq) smx5 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 134092072 lsm3; (RefSeq) snRNA-associated Sm-like protein LSm3 isoform X1 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 134102699 lsm4; (RefSeq) U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 134065945 lsm5; (RefSeq) U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 134100212 lsm6; (RefSeq) U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 134102064 lsm7; (RefSeq) U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 134061941 lsm8; (RefSeq) LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 134069058 xrn1; (RefSeq) 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 134097611 xrn2; (RefSeq) 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 134087312 zgc:103759; (RefSeq) U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 134083022 dcps; (RefSeq) m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 134076929 helz; (RefSeq) probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 134095247 exosc1; (RefSeq) exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 134100751 exosc2; (RefSeq) exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 134095353 exosc3; (RefSeq) exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 134102781 exosc4; (RefSeq) exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 134099577 exosc5; (RefSeq) exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 134094267 exosc6; (RefSeq) exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 134073235 exosc7; (RefSeq) exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 134080154 exosc8; (RefSeq) exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 134059468 exosc9; (RefSeq) exosome complex component RRP45 isoform X1 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 134071363 dis3; (RefSeq) exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 134095194 dis3l; (RefSeq) DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 134087882 exosc10; (RefSeq) exosome component 10 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 134064132 c1d; (RefSeq) nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 134093970 mphosph6; (RefSeq) M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 134073117 tent4a; (RefSeq) terminal nucleotidyltransferase 4A isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 134096117 tent4b; (RefSeq) terminal nucleotidyltransferase 4B K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 134059787 zcchc7; (RefSeq) zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 134069233 zinc finger CCHC domain-containing protein 7-like isoform X1 K12597 AIR1_2; protein AIR1/2
E 134101424 mtrex; (RefSeq) exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 134073058 skic2; (RefSeq) helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 134088687 skic3; (RefSeq) superkiller complex protein 3 K12600 SKI3; superkiller protein 3
E 134094239 skic8; (RefSeq) superkiller complex protein 8 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 134080381 cnot6a; (RefSeq) CCR4-NOT transcription complex subunit 6a K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 134089008 cnot6l; (RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 134094759 cnot1; (RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 134062197 CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 134094686 cnot2; (RefSeq) CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 134072657 cnot3b; (RefSeq) CCR4-NOT transcription complex subunit 3b isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 134082447 cnot3a; (RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 134061851 cnot4b; (RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 134093635 cnot4a; (RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 134068685 cnot7; (RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 134080683 cnot8; (RefSeq) CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 134071526 cnot9; (RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 134083326 cnot10; (RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 134087574 pan2; (RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 134065970 pan3; (RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 134088437 parn; (RefSeq) poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 134099070 dhx36; (RefSeq) ATP-dependent DNA/RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 134062480 btg1; (RefSeq) protein BTG1 K14443 TOB; protein Tob/BTG
E 134069815 tob1b; (RefSeq) protein Tob1b K14443 TOB; protein Tob/BTG
E 134072188 btg4; (RefSeq) protein BTG4 K14443 TOB; protein Tob/BTG
E 134076644 protein Tob2 K14443 TOB; protein Tob/BTG
E 134077538 tob1a; (RefSeq) protein Tob1a K14443 TOB; protein Tob/BTG
E 134079651 maternal B9.10 protein-like K14443 TOB; protein Tob/BTG
E 134082874 si:dkey-79d12.5; (RefSeq) protein BTG3 isoform X1 K14443 TOB; protein Tob/BTG
E 134088227 si:dkey-42i9.4; (RefSeq) protein BTG1 K14443 TOB; protein Tob/BTG
E 134092954 btg2; (RefSeq) protein BTG2 K14443 TOB; protein Tob/BTG
E 134096135 protein BTG3-like K14443 TOB; protein Tob/BTG
E 134065105 noctb; (RefSeq) nocturnin isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 134068749 nocta; (RefSeq) nocturnin isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 134101206 eri1; (RefSeq) 3'-5' exoribonuclease 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 134088428 eri2; (RefSeq) ERI1 exoribonuclease 2 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 134083022 dcps; (RefSeq) m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 134091936 pde12; (RefSeq) 2',5'-phosphodiesterase 12 isoform X1 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 134093716 ireb2; (RefSeq) iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 134076929 helz; (RefSeq) probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 134092623 helicase with zinc finger domain 2-like K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 134092624 helz2a; (RefSeq) helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 134067165 nrde2; (RefSeq) nuclear exosome regulator NRDE2 isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2
E 134068086 samd4a; (RefSeq) protein Smaug homolog 1 K27396 SMG; protein Smaug
E 134100040 protein Smaug homolog 2 isoform X1 K27396 SMG; protein Smaug
E 134059485 focad; (RefSeq) focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 134071468 probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 134072993 zc3h12ab; (RefSeq) ribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 134079740 zc3h12b; (RefSeq) probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 134083140 ribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 134065863 drosha; (RefSeq) ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 134062148 smfn; (RefSeq) small fragment nuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 134059733 eno3; (RefSeq) beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 134072986 eno2; (RefSeq) gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 134080111 beta-enolase-like isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 134082439 gamma-enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 134087834 eno1a; (RefSeq) enolase 1a, (alpha) isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 134091878 eno1b; (RefSeq) enolase 1b, (alpha) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 134064491 polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 134065747 pfkpa; (RefSeq) ATP-dependent 6-phosphofructokinase, platelet type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 134070857 pfklb; (RefSeq) phosphofructokinase, liver b K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 134078772 pfkla; (RefSeq) ATP-dependent 6-phosphofructokinase, liver type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 134087661 pfkma; (RefSeq) phosphofructokinase, muscle a K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 134099921 ATP-dependent 6-phosphofructokinase, platelet type-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 134068930 hspa9; (RefSeq) stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 134070835 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 134078397 hspd1; (RefSeq) 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 134100751 exosc2; (RefSeq) exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 134095247 exosc1; (RefSeq) exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 134102781 exosc4; (RefSeq) exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 134073235 exosc7; (RefSeq) exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 27, 2025