+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Stylophora pistillata (Smooth Cauliflower Coral)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 111336271 LOW QUALITY PROTEIN: mRNA cap guanine-N7 methyltransferase-like K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 111343830 cyclin-dependent kinase 7-like isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 111336909 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1-like K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 111324537 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 111334624 RNMT-activating mini protein-like K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 111325343 nuclear cap-binding protein subunit 1-like K12882 NCBP1; nuclear cap-binding protein subunit 1
E 111320740 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 111339773 cleavage and polyadenylation specificity factor subunit 5-like K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 111320403 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 111344292 protein CLP1 homolog K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 111343386 pre-mRNA cleavage complex 2 protein Pcf11-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 111337382 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111329613 cleavage and polyadenylation specificity factor subunit 3-like isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111321408 cleavage and polyadenylation specificity factor subunit 4-like K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 111337334 pre-mRNA 3'-end-processing factor FIP1-like K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 111329363 pre-mRNA 3' end processing protein WDR33-like K15542 PFS2; polyadenylation factor subunit 2
E 111334890 WD repeat-containing protein 82-like K14962 WDR82; COMPASS component SWD2
E 111343513 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111324826 serine/threonine-protein phosphatase alpha-3 isoform-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111326182 serine/threonine-protein phosphatase alpha-2 isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 111329415 LOW QUALITY PROTEIN: RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 111333582 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 111326719 cleavage stimulation factor subunit 3-like K14408 CSTF3; cleavage stimulation factor subunit 3
E 111339260 symplekin-like K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 111339284 small nuclear ribonucleoprotein-associated protein B'-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 111341050 small nuclear ribonucleoprotein Sm D3-like K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 111326753 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 111324851 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 111331790 probable small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 111324130 U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 111326036 uncharacterized protein LOC111326036 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 111337382 cleavage and polyadenylation specificity factor subunit 2-like K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 111329613 cleavage and polyadenylation specificity factor subunit 3-like isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 111333582 cleavage stimulation factor subunit 2-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 111339260 symplekin-like K06100 SYMPK; symplekin
E 111331199 histone RNA hairpin-binding protein-like K18710 SLBP; histone RNA hairpin-binding protein
D DRB sensitivity inducing factor (DSIF) complex
E 111333017 transcription elongation factor SPT4-like K15171 SUPT4H1; transcription elongation factor SPT4
E 111337184 transcription elongation factor SPT5-like K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 111340244 N6-adenosine-methyltransferase subunit METTL3-like K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 111328332 N6-adenosine-methyltransferase subunit METTL14-like K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 111323930 methyltransferase-like protein 4 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 111339945 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase-like isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 111334121 pre-mRNA-splicing regulator WTAP-like K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 111332613 protein virilizer homolog K22910 VIRMA; protein virilizer
E 111343651 putative RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 111323999 uncharacterized protein LOC111323999 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111343685 uncharacterized protein LOC111343685 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111335955 zinc finger CCCH domain-containing protein 13-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111333812 E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 111347650 poly(A) polymerase beta-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 111347483 poly(A) RNA polymerase GLD2-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 111324025 poly(A) RNA polymerase GLD2-B-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 111324034 poly(A) RNA polymerase GLD2-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 111337477 poly(A) RNA polymerase GLD2-like K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 111338783 poly(A) RNA polymerase, mitochondrial-like isoform X1 K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 111335675 BRCA1-associated RING domain protein 1-like isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 111326288 RNA-binding protein 27-like K13192 RBM26; RNA-binding protein 26
E 111337891 RNA demethylase ALKBH5-like K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 111329210 TAR DNA-binding protein 43-like K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 111338126 probable ATP-dependent RNA helicase DHX40 isoform X1 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 111335342 DNA/RNA-binding protein KIN17-like K13102 KIN; DNA/RNA-binding protein KIN17
D 111321656 methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 111323074 protein FAM46C-like K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 111330629 zinc finger CCCH domain-containing protein 14-like isoform X1 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 111328028 serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 111346265 RNA-binding protein 8A-like K12876 RBM8A; RNA-binding protein 8A
E 111338027 protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 111337166 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 111345222 spliceosome RNA helicase Ddx39b K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 111339314 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111335562 coiled-coil domain-containing protein 174-like K25178 CCDC174; coiled-coil domain-containing protein 174
E 111322613 histone deacetylase complex subunit SAP18-like K14324 SAP18; histone deacetylase complex subunit SAP18
E 111327950 pinin-like K13114 PNN; pinin
E 111335229 apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 111337185 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 111334548 serine/arginine repetitive matrix protein 1-like isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 111340458 THO complex subunit 1-like K12878 THOC1; THO complex subunit 1
E 111334411 THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 111333216 THO complex subunit 3-like K12880 THOC3; THO complex subunit 3
E 111337166 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 111344850 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 111344852 THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 111321597 THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 111339430 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 111339370 PCI domain-containing protein 2-like K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 111337021 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 111343873 centrin-3-like K16466 CETN3; centrin-3
E 111343327 germinal-center associated nuclear protein-like K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 111330139 nucleoprotein TPR-like isoform X1 K09291 TPR; nucleoprotein TPR
E 111330140 nucleoprotein TPR-like K09291 TPR; nucleoprotein TPR
E 111337757 mRNA export factor-like K14298 RAE1; mRNA export factor
E 111346330 protein SEC13 homolog isoform X1 K14004 SEC13; protein transport protein SEC13
E 111326468 nucleoporin Nup37-like K14302 NUP37; nuclear pore complex protein Nup37
E 111333301 nuclear pore complex protein Nup85-like isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 111322530 nucleoporin Nup43-like K14305 NUP43; nuclear pore complex protein Nup43
E 111329925 nuclear pore complex protein Nup50-like K14295 NUP50; nuclear pore complex protein Nup50
E 111324108 nuclear pore complex protein Nup54-like K14308 NUP54; nuclear pore complex protein Nup54
E 111323379 LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like K14306 NUP62; nuclear pore complex protein Nup62
E 111326106 nuclear pore complex protein Nup88-like isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 111321024 nuclear pore complex protein Nup93-like K14309 NUP93; nuclear pore complex protein Nup93
E 111336141 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 111323713 nuclear pore complex protein Nup107-like isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 111330423 LOW QUALITY PROTEIN: nuclear pore complex protein Nup133-like K14300 NUP133; nuclear pore complex protein Nup133
E 111346489 nucleoporin NUP188 homolog isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 111327697 nuclear pore complex protein Nup153-like isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 111323868 nuclear pore complex protein Nup155-like K14312 NUP155; nuclear pore complex protein Nup155
E 111335826 nuclear pore complex protein Nup160-like K14303 NUP160; nuclear pore complex protein Nup160
E 111344573 nucleoporin NUP53-like K14313 NUP35; nuclear pore complex protein Nup53
E 111343579 nuclear pore complex protein Nup205-like isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 111331748 nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 111332462 nuclear pore complex protein Nup214-like isoform X1 K14317 NUP214; nuclear pore complex protein Nup214
E 111345502 nuclear pore complex protein DDB_G0274915-like K14316 POM121; nuclear pore complex protein Nup121
E 111338178 nucleoporin p58/p45-like K14307 NUPL1; nucleoporin p58/p45
E 111323049 nucleoporin NDC1-like isoform X1 K14315 NDC1; nucleoporin NDC1
E 111325730 nucleoporin SEH1-like isoform X1 K14299 SEH1; nucleoporin SEH1
E 111330521 RANBP2-like and GRIP domain-containing protein 2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 111327551 aladin-like K14320 AAAS; aladin
E 111343873 centrin-3-like K16466 CETN3; centrin-3
E 111319490 nucleoporin GLE1-like K18723 GLE1; nucleoporin GLE1
E 111339613 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
E 111337649 NTF2-related export protein 2-like K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 111330112 GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 111344545 acidic leucine-rich nuclear phosphoprotein 32 family member B-like K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 111327168 ELAV-like protein 3 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 111326470 ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 111337404 FAS-associated factor 2-like K18726 FAF2; FAS-associated factor 2
E 111332276 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 111321184 protein-lysine methyltransferase METTL21D-like K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 111326203 exportin-7-like K18460 XPO7; exportin-7
E 111346234 ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 111331692 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 111334632 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 111344643 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 111332189 eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G
E 111331829 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 111342797 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 111327704 eukaryotic translation initiation factor 4H-like K24086 EIF4H; translation initiation factor 4H
E 111336546 eukaryotic translation initiation factor 4E transporter-like K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 111343383 uncharacterized calcium-binding protein At1g02270-like K18729 ANGEL; protein angel
E 111335291 protein angel homolog 2-like isoform X1 K18729 ANGEL; protein angel
E 111342522 synaptic functional regulator FMR1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 111327884 LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 2-like K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111327881 gem-associated protein 5-like K13133 GEMIN5; gem associated protein 5
E 111342267 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111334348 cytoplasmic polyadenylation element-binding protein 1-like isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111328422 ATP-dependent RNA helicase DDX3X-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111327116 GRB10-interacting GYF protein 2-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111341558 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 111323939 polyadenylate-binding protein-interacting protein 1-like isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 111336026 polyadenylate-binding protein-interacting protein 2-like K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 111321051 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111326417 deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 111332820 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 111345662 density-regulated protein homolog K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 111343122 APOBEC1 complementation factor-like isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 111333904 partner of Y14 and mago-like K14294 WIBG; partner of Y14 and mago
E 111321496 heterogeneous nuclear ribonucleoproteins A2/B1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111340762 heterogeneous nuclear ribonucleoprotein A3 homolog 2-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111321411 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111335771 polyadenylate-binding protein, cytoplasmic and nuclear-like K14411 MSI; RNA-binding protein Musashi
E 111322090 RNA-binding protein Musashi homolog 2-like isoform X1 K14411 MSI; RNA-binding protein Musashi
E 111326057 RNA-binding protein Musashi homolog 2-like K14411 MSI; RNA-binding protein Musashi
E 111331764 RNA-binding protein Musashi homolog 2-like K14411 MSI; RNA-binding protein Musashi
E 111333032 LOW QUALITY PROTEIN: protein pelota homolog K06965 PELO; protein pelota
E 111325732 polyadenylate-binding protein 2-B-like isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 111332424 ATP-dependent RNA helicase DDX19A-like K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 111339443 pre-mRNA-splicing factor SYF1-like K12867 SYF1; pre-mRNA-splicing factor SYF1
E 111341505 uncharacterized protein C31H12.03c-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 111327296 regulator of chromosome condensation-like K11493 RCC1; regulator of chromosome condensation
E 111321711 la-related protein 6-like K18733 LARP6; la-related protein 6
E 111337209 transcriptional activator protein Pur-beta-like K21772 PURA; transcriptional activator protein Pur-alpha
E 111336411 uncharacterized protein LOC111336411 K22414 POLDIP3; polymerase delta-interacting protein 3
E 111319951 zinc finger CCCH domain-containing protein 13-like isoform X1 K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 111333292 leukocyte receptor cluster member 8 homolog K23802 LENG8; SAC3 family protein LENG8/THP3
C Surveillance factors
D Surveillance complex
E 111339737 eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1
E 111323993 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 111321675 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111331030 regulator of nonsense transcripts 2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111325521 regulator of nonsense transcripts 3B-like K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 111321943 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 111342447 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform-like isoform X1 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 111326265 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 111321893 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111342457 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 111329108 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 111329121 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform-like K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 111340144 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111325088 protein SMG5-like K11125 SMG5; protein SMG5
E 111333534 telomerase-binding protein EST1A-like K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 111340358 protein SMG7-like K14409 SMG7; protein SMG7
E 111325250 protein SMG8-like K18734 SMG8; protein SMG8
E 111329871 protein SMG9-like K18735 SMG9; protein SMG9
E 111327116 GRB10-interacting GYF protein 2-like K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 111338033 selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 111324434 probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 111341299 GTP-binding protein 1-like K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 111323891 pumilio homolog 3-like K14844 PUF6; pumilio homology domain family member 6
E 111340253 unconventional myosin-Va-like isoform X1 K10357 MYO5; myosin V
E 111328907 LOW QUALITY PROTEIN: unconventional myosin-VIIa-like K10357 MYO5; myosin V
E 111332488 protein bicaudal D homolog 2-like K18739 BICD; protein bicaudal D
E 111328121 piRNA biogenesis protein EXD1-like isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 111331977 uncharacterized protein LOC111331977 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
E 111328595 piRNA biogenesis protein EXD1-like K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 111331277 transcriptional regulator Myc-1-like isoform X1 K04377 MYC; Myc proto-oncogene protein
E 111322965 N-myc 2 proto-oncogene protein-like K04377 MYC; Myc proto-oncogene protein
E 111322966 myc proto-oncogene protein-like K04377 MYC; Myc proto-oncogene protein
E 111333937 T-box transcription factor TBX6-like K10180 TBX6; T-box protein 6
E 111326789 nanos homolog 1-like K18741 NANOS1; protein nanos 1
E 111324445 nanos homolog 1-like K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 111330019 far upstream element-binding protein 3-like K13210 FUBP; far upstream element-binding protein
E 111329426 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
E 111334961 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 111325656 uncharacterized protein LOC111325656 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 111335945 arf-GAP domain and FG repeat-containing protein 1-like K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 111346688 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 111342267 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111334348 cytoplasmic polyadenylation element-binding protein 1-like isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 111342522 synaptic functional regulator FMR1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 111327884 LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 2-like K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 111325449 caprin-1-like K18743 CAPRIN1; caprin-1
E 111331251 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1
E 111329221 nuclease-sensitive element-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 111332903 5'-3' exoribonuclease 1-like K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 111346866 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111337602 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111347567 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111330903 protein argonaute-2-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 111331692 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 111334632 eukaryotic translation initiation factor 4E type 2-like K03259 EIF4E; translation initiation factor 4E
E 111321675 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 111328422 ATP-dependent RNA helicase DDX3X-like isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 111330416 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111325303 RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 111337014 protein LSM14 homolog B-like K18749 LSM14; protein LSM14
E 111331251 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1
E 111329221 nuclease-sensitive element-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 111346822 LIM domain-containing protein jub-like isoform X1 K16682 AJUBA; LIM domain-containing protein
E 111319975 DNA dC->dU-editing enzyme APOBEC-3H-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 111335764 uncharacterized protein LOC111335764 isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 111319976 uncharacterized protein LOC111319976 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 111330030 putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111330059 putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111330060 LOW QUALITY PROTEIN: putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111340558 putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111335770 LOW QUALITY PROTEIN: putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111340546 LOW QUALITY PROTEIN: putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 111323857 transportin-1-like isoform X1 K18752 TNPO1; transportin-1
E 111340144 serine/threonine-protein kinase SMG1-like K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 111325088 protein SMG5-like K11125 SMG5; protein SMG5
E 111333534 telomerase-binding protein EST1A-like K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 111340358 protein SMG7-like K14409 SMG7; protein SMG7
E 111320938 mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 111322516 rho-related protein racA-like K18754 LIN28; protein lin-28
E 111322762 huntingtin-like K04533 HD; huntingtin
E 111345334 protein bicaudal C homolog 1-like K18756 BICC1; protein bicaudal C
E 111321496 heterogeneous nuclear ribonucleoproteins A2/B1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111340762 heterogeneous nuclear ribonucleoprotein A3 homolog 2-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111321411 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 111331523 cAMP-dependent protein kinase catalytic subunit alpha-like isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 111333991 la-related protein 1B-like isoform X1 K18757 LARP1; la-related protein 1
D P-body specific factors
E 111337311 m7GpppN-mRNA hydrolase-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111341154 mRNA-decapping enzyme 1A-like isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111330784 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111339453 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111324200 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111337672 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111338388 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111324272 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111325312 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111334328 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111338898 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 111347580 kinesin light chain-like isoform X3 K10407 KLC; kinesin light chain
E 111340253 unconventional myosin-Va-like isoform X1 K10357 MYO5; myosin V
E 111328907 LOW QUALITY PROTEIN: unconventional myosin-VIIa-like K10357 MYO5; myosin V
E 111337408 LOW QUALITY PROTEIN: tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 111336622 tubulin alpha-1D chain-like K07374 TUBA; tubulin alpha
E 111336817 tubulin alpha-1A chain-like isoform X1 K07374 TUBA; tubulin alpha
E 111336950 tubulin alpha-1D chain-like K07374 TUBA; tubulin alpha
E 111336951 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 111336952 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 111339854 tubulin alpha-8 chain-like K07374 TUBA; tubulin alpha
E 111330927 tubulin alpha-1D chain isoform X1 K07374 TUBA; tubulin alpha
E 111342267 cytoplasmic polyadenylation element-binding protein 2-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111334348 cytoplasmic polyadenylation element-binding protein 1-like isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 111327881 gem-associated protein 5-like K13133 GEMIN5; gem associated protein 5
E 111337157 trinucleotide repeat-containing gene 6A protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 111341230 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111326471 CCR4-NOT transcription complex subunit 2-like K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111323283 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111329119 CCR4-NOT transcription complex subunit 4-like isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111336620 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111339208 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111340045 uncharacterized protein LOC111340045 isoform X1 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 111325629 LOW QUALITY PROTEIN: DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 111323742 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 111335503 PAN2-PAN3 deadenylation complex subunit pan3-like K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 111332257 protein BTG2-like K14443 TOB; protein Tob/BTG
E 111338454 protein BTG1-like K14443 TOB; protein Tob/BTG
E 111341711 protein Tob2-like K14443 TOB; protein Tob/BTG
E 111336546 eukaryotic translation initiation factor 4E transporter-like K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 111321270 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 111337721 enhancer of mRNA-decapping protein 4-like isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111331030 regulator of nonsense transcripts 2-like K14327 UPF2; regulator of nonsense transcripts 2
E 111325521 regulator of nonsense transcripts 3B-like K14328 UPF3; regulator of nonsense transcripts 3
E 111325712 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111325723 E3 ubiquitin-protein ligase TRIM71-like isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111334202 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111320422 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111319401 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111319402 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111340342 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111319469 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111320574 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111330152 E3 ubiquitin-protein ligase TRIM71-like isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111333314 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111333339 tripartite motif-containing protein 2-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111333342 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111323839 tripartite motif-containing protein 2-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111326981 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111330171 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111334451 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111338573 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111319623 uncharacterized protein LOC111319623 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332408 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111337599 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111338711 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111342693 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111342694 uncharacterized protein LOC111342694 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111342698 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111337842 uncharacterized protein LOC111337842 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111346217 tripartite motif-containing protein 2-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347391 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332694 protein lin-41-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111328509 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111334963 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347396 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347445 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347247 E3 ubiquitin-protein ligase TRIM71-like isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347259 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111325302 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111322257 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111323318 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111327568 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111342998 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111344144 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347472 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347473 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332714 protein lin-41-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332931 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347603 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347605 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111319072 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111321368 LOW QUALITY PROTEIN: tripartite motif-containing protein 2-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111323464 E3 ubiquitin-protein ligase TRIM71-like isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111331972 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111336255 tripartite motif-containing protein 2-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111336293 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111338188 tripartite motif-containing protein 3-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111340189 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111340200 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111340202 tripartite motif-containing protein 3-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111323274 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111323275 E3 ubiquitin-protein ligase TRIM71-like isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111338993 uncharacterized protein LOC111338993 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332942 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111337073 RING finger protein nhl-1-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111347549 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111344334 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111344339 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111338575 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111327215 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332503 E3 ubiquitin-protein ligase TRIM71-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111332601 RING finger protein nhl-1-like K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 111336069 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB7-like K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 111343895 YTH domain-containing family protein 1-like K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 111331970 nucleolysin TIAR-like K13201 TIA1; nucleolysin TIA-1/TIAR
E 111341558 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 111346688 double-stranded RNA-binding protein Staufen homolog 2-like isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 111342522 synaptic functional regulator FMR1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 111335492 ras GTPase-activating protein-binding protein 1-like K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 111339374 eukaryotic translation initiation factor 2A-like K15026 EIF2A; translation initiation factor 2A
E 111325428 eukaryotic translation initiation factor 3 subunit B-like K03253 EIF3B; translation initiation factor 3 subunit B
E 111344643 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 111339314 eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 111342797 eukaryotic translation initiation factor 4B-like K03258 EIF4B; translation initiation factor 4B
E 111332189 eukaryotic translation initiation factor 4 gamma 1-like K03260 EIF4G; translation initiation factor 4G
E 111331829 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 111322520 ribosomal protein S6 kinase alpha-3-like isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 111321965 receptor of activated protein C kinase 1-like K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 111339487 TNF receptor-associated factor 3-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111336851 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111345103 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111345104 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111339668 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111339676 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111342959 TNF receptor-associated factor 3-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 111339613 nuclear RNA export factor 1-like K14284 NXF; nuclear RNA export factor
E 111328630 tudor domain-containing protein 3-like isoform X1 K18404 TDRD3; tudor domain-containing protein 3
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 111341154 mRNA-decapping enzyme 1A-like isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 111337311 m7GpppN-mRNA hydrolase-like K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 111330416 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 111337721 enhancer of mRNA-decapping protein 4-like isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 111321270 protein PAT1 homolog 1-like K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 111330784 U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 111339453 U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 111324200 U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 111337672 probable U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 111338388 U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 111324272 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111325312 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 111334328 U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 111338898 U6 snRNA-associated Sm-like protein LSm8 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 111332903 5'-3' exoribonuclease 1-like K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 111333346 5'-3' exoribonuclease 2-like K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 111334884 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 111331430 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
C 3'-5' decay
D Core exosome factors
E 111325152 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
E 111332325 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 111342426 putative exosome complex component rrp40 K03681 RRP40; exosome complex component RRP40
E 111334763 exosome complex component RRP41-like isoform X1 K11600 RRP41; exosome complex component RRP41
E 111341509 exosome complex component RRP46-like K12590 RRP46; exosome complex component RRP46
E 111333737 LOW QUALITY PROTEIN: exosome complex component MTR3-like K12587 MTR3; exosome complex component MTR3
E 111330719 exosome complex component RRP42-like K12589 RRP42; exosome complex component RRP42
E 111327008 exosome complex component RRP43-like K12586 RRP43; exosome complex component RRP43
E 111344614 exosome complex component RRP45-like K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 111332842 exosome complex exonuclease RRP44-like K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 111334076 DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 111319758 exosome component 10-like K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 111334118 nuclear nucleic acid-binding protein C1D-like isoform X1 K12592 C1D; exosome complex protein LRP1
E 111329528 M-phase phosphoprotein 6-like K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 111340467 probable ATP-dependent RNA helicase DDX60-like K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 111340468 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 111340471 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 111340478 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 111329334 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 111337703 non-canonical poly(A) RNA polymerase PAPD5-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 111323843 zinc finger CCHC domain-containing protein 7-like isoform X1 K12597 AIR1_2; protein AIR1/2
E 111323146 superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 111321051 helicase SKI2W-like K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 111336125 WD repeat-containing protein 61-like K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 111336620 CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 111341230 CCR4-NOT transcription complex subunit 1-like K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 111326471 CCR4-NOT transcription complex subunit 2-like K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 111323283 CCR4-NOT transcription complex subunit 3-like isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 111329119 CCR4-NOT transcription complex subunit 4-like isoform X1 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 111339208 CCR4-NOT transcription complex subunit 7-like K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 111341471 CCR4-NOT transcription complex subunit 9-like K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 111343015 CCR4-NOT transcription complex subunit 10-like isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 111323742 PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 111335503 PAN2-PAN3 deadenylation complex subunit pan3-like K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 111345468 poly(A)-specific ribonuclease PNLDC1-like isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111334396 LOW QUALITY PROTEIN: poly(A)-specific ribonuclease PARN-like K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 111338787 DExH-box ATP-dependent RNA helicase DExH1-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111339088 ATP-dependent RNA helicase DHX36-like K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 111332257 protein BTG2-like K14443 TOB; protein Tob/BTG
E 111338454 protein BTG1-like K14443 TOB; protein Tob/BTG
E 111341711 protein Tob2-like K14443 TOB; protein Tob/BTG
E 111337344 nocturnin-like isoform X1 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 111331774 3'-5' exoribonuclease 1-like K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 111331793 3'-5' exoribonuclease 1-like K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 111323306 ERI1 exoribonuclease 2-like K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 111331430 m7GpppX diphosphatase-like K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 111328170 2',5'-phosphodiesterase 12-like K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 111336086 uncharacterized protein LOC111336086 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 111336080 uncharacterized protein LOC111336080 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 111327962 protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 111327959 protein Smaug homolog 1-like isoform X1 K27396 SMG; protein Smaug
E 111324587 focadhesin-like isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 111326236 endoribonuclease ZC3H12A-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 111333993 ribonuclease ZC3H12A-like isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 111327763 NEDD4-binding protein 1-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 111328883 ribonuclease 3-like K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 111329752 oligoribonuclease, mitochondrial-like K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
E 111340847 uncharacterized protein LOC111340847 isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 111332700 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 111345187 uncharacterized protein LOC111345187 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 111343564 mediator of RNA polymerase II transcription subunit 34-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 111330729 mediator of RNA polymerase II transcription subunit 34-like isoform X1 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
E 111321768 Bloom syndrome protein homolog K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Other RNA degradosome components
E 111332435 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 111331873 polyribonucleotide nucleotidyltransferase 1, mitochondrial-like K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C Other RNA degradation factors
D Chaperones
E 111320913 stress-70 protein, mitochondrial-like K04043 dnaK; molecular chaperone DnaK
E 111323517 60 kDa heat shock protein, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 111332325 exosome complex component RRP4-like K03679 RRP4; exosome complex component RRP4
E 111325152 exosome complex component CSL4-like K07573 CSL4; exosome complex component CSL4
D Cofactors
E 111334763 exosome complex component RRP41-like isoform X1 K11600 RRP41; exosome complex component RRP41
E 111330719 exosome complex component RRP42-like K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024