+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptococcus pyogenes A20 (serotype M1)
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D A20_0483 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C A20_0440 era; GTP-binding protein Era K03595 era; GTPase
C A20_1122c cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C A20_1460c nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C A20_1593c nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C A20_0188 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D A20_1126c rsuA; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D A20_1173c rsuA; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D A20_0268 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D A20_1380c sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D A20_0980c rsmC; methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D A20_1301c methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D A20_1738c nadD; RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D A20_0327c gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D A20_1412c mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D A20_0385 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D A20_1264c yiiB; hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D A20_1701c rlmB; RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D A20_1913c rlmH; SPOUT methyltransferase family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D A20_0667 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D A20_1295c rlmN; radical SAM superfamily protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D A20_1264c yiiB; hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D A20_1132c rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D A20_0358 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D A20_0682 rluD3; pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D A20_1800 rluD; pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D A20_0888 rluD; pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C A20_1638c rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C A20_0698 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C A20_1739c prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C A20_0483 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C A20_1842c yrrK; putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C A20_1703c hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C A20_1188c deaD; DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C A20_1407c cshB; DEAD-box ATP-dependent RNA helicase CshB K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C A20_0440 era; GTP-binding protein Era K03595 era; GTPase
C A20_0269 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C A20_0336 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
C A20_1122c cgtA; obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C A20_0920 ylqF; ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
C A20_0767 hflX; GTP-binding protein HflX K03665 hflX; GTPase
C A20_0311 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C A20_0903 yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C A20_1733c relA; bifunctional (p)ppGpp synthase/hydrolase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C A20_1456c rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C A20_1461c rimP; ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
C A20_1898 yaaA; cytoplasmic protein K14761 rlbA; ribosome-associated protein
C A20_0315 Iojap protein K09710 ybeB; ribosome-associated protein
C A20_0438 ykjF; uncharacterized UPF0054 family protein K07042 ybeY; probable rRNA maturation factor
C A20_0312 hypothetical protein K07574 yhbY; RNA-binding protein
C A20_1368c raiA; Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
C A20_0005 ychF; GTPase of unknown function family protein K06942 ychF; ribosome-binding ATPase
C A20_0330 ylbN; nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024