+D GENES KO
#
KEGG Orthology (KO) - Sphingomonas qomolangmaensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sqo00010]
D NMP03_14850 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NMP03_05600 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NMP03_09885 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_04970 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NMP03_03370 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NMP03_03380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NMP03_11385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NMP03_03630 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NMP03_11355 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NMP03_09230 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NMP03_03640 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NMP03_03645 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NMP03_01255 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_04200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_09645 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_08460 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NMP03_02885 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NMP03_07370 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NMP03_14390 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_04575 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:sqo00020]
D NMP03_05050 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NMP03_05545 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1]
D NMP03_10000 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NMP03_04105 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NMP03_15990 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NMP03_15985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NMP03_12625 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NMP03_16030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NMP03_16020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NMP03_16040 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NMP03_16035 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NMP03_13565 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D NMP03_08905 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NMP03_16005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NMP03_04575 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NMP03_03640 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NMP03_03645 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NMP03_01255 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sqo00030]
D NMP03_14850 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NMP03_04040 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NMP03_04035 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D NMP03_12500 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NMP03_03365 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NMP03_10650 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NMP03_13280 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_12640 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NMP03_04030 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D NMP03_04020 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NMP03_02565 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D NMP03_10930 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_05600 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NMP03_09885 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
C 00040 Pentose and glucuronate interconversions [PATH:sqo00040]
D NMP03_10935 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D NMP03_07425 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D NMP03_08235 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D NMP03_10940 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D NMP03_01835 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14520 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14750 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_01915 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NMP03_12500 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NMP03_02870 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D NMP03_02865 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NMP03_08210 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D NMP03_08205 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110]
D NMP03_02880 dihydroxy-acid dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D NMP03_08195 dihydroxy-acid dehydratase family protein K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D NMP03_08225 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:sqo00051]
D NMP03_04775 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NMP03_08830 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NMP03_01660 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NMP03_10015 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NMP03_13455 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NMP03_13040 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D NMP03_05600 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NMP03_09885 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NMP03_02865 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_04970 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NMP03_13460 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D NMP03_13280 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NMP03_04600 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:sqo00052]
D NMP03_02885 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NMP03_07370 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NMP03_14390 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NMP03_00020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NMP03_01915 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_08150 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NMP03_05940 Gfo/Idh/MocA family oxidoreductase K00035 gal; D-galactose 1-dehydrogenase [EC:1.1.1.48]
D NMP03_02375 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D NMP03_02380 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D NMP03_12990 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NMP03_15155 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:sqo00053]
D NMP03_01835 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14520 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14750 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_13040 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D NMP03_01905 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_08225 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:sqo00500]
D NMP03_12990 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NMP03_15155 alpha-amylase family glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NMP03_01915 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NMP03_03340 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_03785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_08180 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_08175 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NMP03_15150 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NMP03_13375 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D NMP03_04760 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NMP03_04765 treS; maltose alpha-D-glucosyltransferase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D NMP03_04745 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D NMP03_04770 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D NMP03_04755 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D NMP03_04740 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D NMP03_04750 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D NMP03_02340 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D NMP03_02330 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_14850 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NMP03_04775 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sqo00520]
D NMP03_08015 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NMP03_04775 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NMP03_01810 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NMP03_14870 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NMP03_01805 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NMP03_05075 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D NMP03_05175 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D NMP03_05170 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D NMP03_13195 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NMP03_00685 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NMP03_01900 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D NMP03_01895 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D NMP03_15030 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D NMP03_02860 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D NMP03_02480 beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NMP03_08135 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NMP03_08170 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_01915 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NMP03_01835 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14520 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14750 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_00020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NMP03_01905 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NMP03_04600 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D NMP03_14850 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NMP03_08830 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NMP03_10015 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NMP03_01660 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NMP03_13455 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NMP03_13460 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D NMP03_13375 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D NMP03_13380 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D NMP03_13385 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D NMP03_13370 FAD-binding oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D NMP03_13395 GDP-mannose 4,6-dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
C 00620 Pyruvate metabolism [PATH:sqo00620]
D NMP03_08460 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NMP03_03640 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NMP03_03645 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NMP03_01255 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_09645 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NMP03_11355 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NMP03_08580 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NMP03_08315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NMP03_08320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NMP03_05740 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NMP03_03840 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_04200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NMP03_10530 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D NMP03_10525 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NMP03_12305 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NMP03_06830 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D NMP03_16005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NMP03_13565 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D NMP03_08905 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NMP03_12710 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NMP03_04575 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D NMP03_09230 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NMP03_02305 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06060 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sqo00630]
D NMP03_06805 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D NMP03_08460 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NMP03_02305 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D NMP03_16005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NMP03_05050 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D NMP03_05545 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1]
D NMP03_10000 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_10130 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NMP03_08505 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D NMP03_08480 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D NMP03_08510 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NMP03_08495 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D NMP03_05800 catalase K03781 katE; catalase [EC:1.11.1.6]
D NMP03_00510 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D NMP03_00560 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NMP03_01800 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NMP03_08865 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NMP03_09485 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NMP03_13270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NMP03_09140 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D NMP03_09135 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D NMP03_09150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_09145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D NMP03_15275 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D NMP03_04020 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:sqo00640]
D NMP03_08460 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NMP03_11510 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D NMP03_11505 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D NMP03_11500 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_08580 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NMP03_08315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NMP03_08320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NMP03_05740 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NMP03_08480 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D NMP03_08510 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NMP03_08505 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D NMP03_08495 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D NMP03_12625 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NMP03_15995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NMP03_08105 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NMP03_04200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:sqo00650]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_10170 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D NMP03_04830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_11185 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D NMP03_09620 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D NMP03_10130 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D NMP03_16030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NMP03_16020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NMP03_16040 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NMP03_16035 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NMP03_02550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NMP03_08280 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D NMP03_08270 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D NMP03_09095 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D NMP03_06035 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_08290 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_06040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NMP03_09500 SDR family oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:sqo00660]
D NMP03_06035 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_08290 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_06040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NMP03_12625 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NMP03_15995 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NMP03_06665 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NMP03_06650 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NMP03_00810 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sqo00562]
D NMP03_03415 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NMP03_11155 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NMP03_08105 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NMP03_04970 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sqo00190]
D NMP03_03420 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D NMP03_03425 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D NMP03_03430 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D NMP03_03435 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D NMP03_03440 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D NMP03_03450 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D NMP03_03460 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D NMP03_03465 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D NMP03_03470 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D NMP03_03475 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D NMP03_03480 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D NMP03_03485 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D NMP03_03490 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D NMP03_03495 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D NMP03_05490 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NMP03_16030 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NMP03_16020 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NMP03_16040 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NMP03_16035 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D NMP03_00210 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D NMP03_00215 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NMP03_00220 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D NMP03_10320 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NMP03_10335 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D NMP03_10315 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D NMP03_10330 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D NMP03_00885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NMP03_07640 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D NMP03_07635 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D NMP03_07630 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D NMP03_07625 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D NMP03_01870 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NMP03_01875 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NMP03_02560 c-type cytochrome K08738 CYC; cytochrome c
D NMP03_11450 cytochrome c family protein K08738 CYC; cytochrome c
D NMP03_12850 c-type cytochrome K08738 CYC; cytochrome c
D NMP03_10695 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NMP03_10710 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NMP03_10700 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NMP03_10690 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NMP03_10715 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NMP03_00745 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NMP03_00750 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NMP03_13170 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D NMP03_04460 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:sqo00680]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05910 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D NMP03_13270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NMP03_03630 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NMP03_12710 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D NMP03_16005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_05600 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NMP03_09885 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D NMP03_08460 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NMP03_11385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NMP03_10415 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NMP03_10420 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NMP03_06025 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:sqo00910]
D NMP03_09330 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D NMP03_09345 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D NMP03_09335 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D NMP03_09340 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D NMP03_03720 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D NMP03_13580 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NMP03_09485 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NMP03_15760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NMP03_15745 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D NMP03_04430 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sqo00920]
D NMP03_13840 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D NMP03_01825 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NMP03_01830 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NMP03_01820 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NMP03_02425 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D NMP03_02435 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D NMP03_11420 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NMP03_06905 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NMP03_00620 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NMP03_05825 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NMP03_13630 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NMP03_00825 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D NMP03_05835 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D NMP03_16155 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sqo00061]
D NMP03_08580 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D NMP03_08315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D NMP03_08320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D NMP03_05740 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D NMP03_04005 acyl carrier protein K02078 acpP; acyl carrier protein
D NMP03_07895 acyl carrier protein K02078 acpP; acyl carrier protein
D NMP03_03990 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NMP03_12325 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NMP03_04010 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NMP03_03995 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_16055 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_04175 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NMP03_11570 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NMP03_11865 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D NMP03_00095 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sqo00071]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_04830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NMP03_04840 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D NMP03_04880 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D NMP03_12455 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NMP03_00095 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_12425 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sqo00561]
D NMP03_15275 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_09645 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D NMP03_04790 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NMP03_12320 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NMP03_13320 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NMP03_01225 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:sqo00564]
D NMP03_12480 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D NMP03_13320 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D NMP03_16085 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NMP03_04115 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NMP03_04110 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D NMP03_14380 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D NMP03_06935 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
D NMP03_13290 DUF3419 family protein K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase
D NMP03_13295 methyltransferase domain-containing protein K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D NMP03_08150 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:sqo01040]
D NMP03_07805 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D NMP03_02385 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D NMP03_04850 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D NMP03_01265 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sqo00230]
D NMP03_12950 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_12640 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NMP03_05860 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NMP03_10085 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D NMP03_04480 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NMP03_08330 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D NMP03_00370 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D NMP03_00365 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NMP03_04475 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D NMP03_12720 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D NMP03_12725 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D NMP03_00375 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D NMP03_10870 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NMP03_12510 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NMP03_00225 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NMP03_04935 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NMP03_10160 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NMP03_04550 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NMP03_04490 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NMP03_10610 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NMP03_10750 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D NMP03_16100 xanthine dehydrogenase family protein molybdopterin-binding subunit K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D NMP03_10755 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D NMP03_16095 xanthine dehydrogenase family protein subunit M K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D NMP03_10760 paoA; aldehyde dehydrogenase iron-sulfur subunit K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D NMP03_16090 2Fe-2S iron-sulfur cluster-binding protein K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D NMP03_01455 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NMP03_08890 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NMP03_12800 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NMP03_10780 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NMP03_00715 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D NMP03_11205 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NMP03_13770 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NMP03_11545 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NMP03_05210 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D NMP03_01415 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NMP03_04365 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NMP03_01825 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NMP03_01830 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NMP03_05950 fumarylacetoacetate hydrolase family protein K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3]
C 00240 Pyrimidine metabolism [PATH:sqo00240]
D NMP03_03590 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NMP03_03580 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NMP03_02895 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NMP03_02890 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D NMP03_06875 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D NMP03_00080 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D NMP03_10305 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NMP03_05715 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D NMP03_04135 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NMP03_04490 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NMP03_04365 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NMP03_10990 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D NMP03_12145 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D NMP03_04065 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D NMP03_06550 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D NMP03_04935 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NMP03_00490 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D NMP03_00475 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D NMP03_12800 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NMP03_10780 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NMP03_04335 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NMP03_01940 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NMP03_12900 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D NMP03_09855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NMP03_10860 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sqo00250]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_12535 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D NMP03_11270 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NMP03_03140 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NMP03_15045 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NMP03_03045 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D NMP03_11390 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NMP03_13820 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NMP03_11545 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NMP03_10870 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NMP03_02895 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D NMP03_02550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NMP03_15760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NMP03_15745 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D NMP03_13580 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NMP03_09590 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NMP03_09485 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NMP03_03590 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NMP03_03580 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NMP03_12435 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D NMP03_00365 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NMP03_01810 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NMP03_05860 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sqo00260]
D NMP03_11870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NMP03_05235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NMP03_09895 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NMP03_09165 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D NMP03_01040 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NMP03_10350 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NMP03_10220 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D NMP03_13270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NMP03_11385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NMP03_15275 kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D NMP03_10415 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NMP03_10420 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NMP03_06025 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D NMP03_02175 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NMP03_13305 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NMP03_03745 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NMP03_09140 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D NMP03_09135 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D NMP03_09150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_09145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D NMP03_04115 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D NMP03_03165 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NMP03_08050 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NMP03_06865 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NMP03_05735 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NMP03_05725 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:sqo00270]
D NMP03_06905 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NMP03_00620 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NMP03_05825 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NMP03_11415 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NMP03_06745 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_06750 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_05565 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NMP03_13530 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NMP03_11700 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D NMP03_11710 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NMP03_00025 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D NMP03_10160 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NMP03_00285 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D NMP03_05190 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NMP03_11870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NMP03_05235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NMP03_09895 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NMP03_13630 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NMP03_00825 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D NMP03_07175 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NMP03_13155 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D NMP03_10635 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_11420 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NMP03_04200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NMP03_06865 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NMP03_16005 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NMP03_10415 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NMP03_10420 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:sqo00280]
D NMP03_07175 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NMP03_03030 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D NMP03_11510 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D NMP03_11505 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D NMP03_11500 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_04840 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D NMP03_04880 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D NMP03_08430 acyl-CoA dehydrogenase family protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_08480 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D NMP03_08510 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NMP03_08505 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D NMP03_08495 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D NMP03_08080 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D NMP03_08040 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D NMP03_08105 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_08420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D NMP03_08425 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D NMP03_08280 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D NMP03_08270 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sqo00290]
D NMP03_03165 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NMP03_08050 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NMP03_06665 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NMP03_06650 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NMP03_00810 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D NMP03_06035 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_08290 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_06040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NMP03_06045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NMP03_04655 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NMP03_07175 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NMP03_03030 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D NMP03_06060 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sqo00300]
D NMP03_09895 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NMP03_11870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NMP03_05235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NMP03_03860 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NMP03_14820 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NMP03_09980 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D NMP03_00135 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NMP03_02020 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NMP03_03090 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NMP03_13830 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NMP03_00650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NMP03_00655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sqo00310]
D NMP03_15985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_12455 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06865 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NMP03_02550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NMP03_12445 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:sqo00220]
D NMP03_00140 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D NMP03_11390 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NMP03_13820 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NMP03_12435 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D NMP03_00365 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NMP03_09485 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NMP03_03590 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NMP03_03580 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D NMP03_13580 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_05150 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D NMP03_11255 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D NMP03_04045 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D NMP03_00135 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:sqo00330]
D NMP03_13235 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D NMP03_13230 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D NMP03_03160 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D NMP03_11710 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D NMP03_11700 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D NMP03_03155 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_03745 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NMP03_04835 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_06860 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_05895 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D NMP03_05900 N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D NMP03_02455 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D NMP03_07160 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NMP03_09590 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NMP03_07885 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NMP03_11820 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:sqo00340]
D NMP03_11025 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D NMP03_05850 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D NMP03_08935 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D NMP03_08930 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D NMP03_08940 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D NMP03_08920 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D NMP03_13635 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NMP03_15800 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D NMP03_11020 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_03745 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NMP03_10180 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:sqo00350]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_13635 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NMP03_07310 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NMP03_07315 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D NMP03_10280 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D NMP03_11535 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D NMP03_14160 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D NMP03_03745 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_02550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:sqo00360]
D NMP03_16065 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D NMP03_14160 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D NMP03_03745 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NMP03_08500 enoyl-CoA hydratase-related protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_10170 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_13635 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NMP03_07310 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NMP03_01085 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D NMP03_04835 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_06860 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_12425 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:sqo00380]
D NMP03_06965 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D NMP03_00380 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D NMP03_15985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_12455 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_14160 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D NMP03_03745 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_04835 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_06860 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_05800 catalase K03781 katE; catalase [EC:1.11.1.6]
D NMP03_01085 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sqo00400]
D NMP03_02825 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NMP03_08605 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D NMP03_08310 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D NMP03_12150 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NMP03_08600 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NMP03_06545 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D NMP03_11555 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D NMP03_04980 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NMP03_04990 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NMP03_04995 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NMP03_05720 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D NMP03_05000 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D NMP03_05735 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NMP03_05725 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NMP03_12980 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D NMP03_13640 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D NMP03_11455 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_13635 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NMP03_16065 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:sqo00410]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D NMP03_10030 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_08105 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:sqo00430]
D NMP03_00090 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NMP03_03045 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D NMP03_13580 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D NMP03_04355 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:sqo00450]
D NMP03_11415 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NMP03_06745 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_06750 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_05565 cobalamin-independent methionine synthase II family protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NMP03_00050 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D NMP03_03065 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NMP03_05270 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NMP03_01825 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NMP03_01830 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NMP03_04345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sqo00460]
D NMP03_03340 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_03785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_08180 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_00090 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NMP03_11270 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NMP03_13270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:sqo00470]
D NMP03_06735 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NMP03_00690 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NMP03_06865 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D NMP03_12435 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D NMP03_00365 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D NMP03_13315 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NMP03_00665 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NMP03_10960 DUF1611 domain-containing protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D NMP03_10955 ycjG; L-Ala-D/L-Glu epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D NMP03_03090 pyridoxal-dependent decarboxylase, exosortase A system-associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NMP03_13830 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NMP03_09175 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D NMP03_08225 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00480 Glutathione metabolism [PATH:sqo00480]
D NMP03_00090 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NMP03_13155 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D NMP03_10635 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D NMP03_04500 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NMP03_04960 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NMP03_10245 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NMP03_01240 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_02030 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_04730 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_11040 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_15770 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_14855 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D NMP03_04105 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NMP03_04040 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NMP03_04090 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D NMP03_05200 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D NMP03_03160 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D NMP03_11710 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sqo00511]
D NMP03_08150 DUF4982 domain-containing protein K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D NMP03_02495 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sqo00541]
D NMP03_01915 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NMP03_00020 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NMP03_01835 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14520 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_14750 hypothetical protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D NMP03_01905 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D NMP03_13470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NMP03_13480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NMP03_13485 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NMP03_13475 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NMP03_13375 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D NMP03_13380 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D NMP03_13385 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D NMP03_13370 FAD-binding oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D NMP03_13395 GDP-mannose 4,6-dehydratase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D NMP03_08830 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NMP03_01660 sugar phosphate nucleotidyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D NMP03_10015 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NMP03_13455 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D NMP03_13460 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D NMP03_01805 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NMP03_01900 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D NMP03_01895 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D NMP03_15030 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:sqo00550]
D NMP03_13195 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NMP03_00685 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NMP03_00680 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NMP03_00665 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NMP03_00650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NMP03_00690 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NMP03_00655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NMP03_04145 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NMP03_15740 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NMP03_03280 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NMP03_00660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NMP03_00675 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NMP03_05455 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NMP03_09835 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NMP03_03940 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NMP03_04330 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:sqo00552]
D NMP03_15740 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NMP03_03280 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sqo00543]
D NMP03_06905 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NMP03_10450 sugar transferase K16566 exoY; exopolysaccharide production protein ExoY
D NMP03_14625 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D NMP03_14635 glycosyltransferase K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sqo00730]
D NMP03_11945 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D NMP03_03180 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_03185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_00900 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NMP03_08300 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D NMP03_03395 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D NMP03_11005 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NMP03_05495 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NMP03_08405 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NMP03_01415 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:sqo00740]
D NMP03_12025 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NMP03_12670 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NMP03_12660 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NMP03_12675 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D NMP03_12665 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D NMP03_09865 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NMP03_13840 NAD(P)H-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D NMP03_12950 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:sqo00750]
D NMP03_11605 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D NMP03_10420 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NMP03_04515 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D NMP03_10295 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D NMP03_01040 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NMP03_10350 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sqo00760]
D NMP03_12535 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D NMP03_06605 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D NMP03_06600 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D NMP03_04935 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D NMP03_11805 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D NMP03_04365 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NMP03_11460 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D NMP03_07335 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D NMP03_04415 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D NMP03_14825 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D NMP03_05125 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NMP03_14915 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NMP03_14930 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NMP03_14935 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D NMP03_06075 (2Fe-2S)-binding protein K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D NMP03_02550 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:sqo00770]
D NMP03_06035 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_08290 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NMP03_06040 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NMP03_06045 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NMP03_04655 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NMP03_08375 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D NMP03_10030 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D NMP03_03505 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D NMP03_01950 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D NMP03_04365 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D NMP03_00575 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NMP03_12155 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NMP03_10290 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D NMP03_07175 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:sqo00780]
D NMP03_04010 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NMP03_03995 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_16055 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_04175 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NMP03_11570 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NMP03_07900 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NMP03_14065 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NMP03_14055 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NMP03_14060 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D NMP03_08485 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D NMP03_03500 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:sqo00785]
D NMP03_00175 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NMP03_04425 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_03640 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D NMP03_03645 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D NMP03_01255 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NMP03_15990 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D NMP03_15985 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D NMP03_11510 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D NMP03_11505 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D NMP03_11500 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D NMP03_09140 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D NMP03_09135 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D NMP03_09150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NMP03_09145 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:sqo00790]
D NMP03_06065 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NMP03_08405 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NMP03_02745 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D NMP03_14900 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D NMP03_09860 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NMP03_05745 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NMP03_12025 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NMP03_12670 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D NMP03_12300 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D NMP03_15445 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NMP03_10380 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D NMP03_16065 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D NMP03_00160 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NMP03_15450 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NMP03_00155 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NMP03_15440 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NMP03_11430 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NMP03_05120 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NMP03_05025 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NMP03_06925 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NMP03_04695 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D NMP03_05030 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:sqo00670]
D NMP03_09860 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NMP03_02815 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D NMP03_11245 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NMP03_13270 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NMP03_04480 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D NMP03_12510 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NMP03_04630 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NMP03_09150 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NMP03_06745 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_06750 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_09855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NMP03_06755 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NMP03_03350 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:sqo00860]
D NMP03_02175 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NMP03_13305 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NMP03_05045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_12645 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_05975 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NMP03_12470 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D NMP03_12135 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D NMP03_00195 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D NMP03_12130 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D NMP03_10135 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NMP03_09350 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D NMP03_02445 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D NMP03_10320 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NMP03_00885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NMP03_11060 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D NMP03_11075 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D NMP03_10190 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NMP03_00945 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NMP03_00970 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D NMP03_00965 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D NMP03_00940 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K02225 cobC1; cobalamin biosynthesis protein CobC
D NMP03_00930 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D NMP03_00980 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D NMP03_00975 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D NMP03_02225 magnesium chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D NMP03_02085 magnesium chelatase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D NMP03_02080 ATP-binding protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D NMP03_02215 bchM; magnesium protoporphyrin IX methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]
D NMP03_02185 acsF; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D NMP03_07000 NAD(P)H-binding protein K19073 DVR; divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]
D NMP03_02220 bchL; ferredoxin:protochlorophyllide reductase (ATP-dependent) iron-sulfur ATP-binding protein K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D NMP03_02235 ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D NMP03_02230 bchB; ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D NMP03_02255 chlG; chlorophyll synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D NMP03_02120 chlorophyllide a reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D NMP03_02125 bchY; chlorophyllide a reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D NMP03_02130 bchZ; chlorophyllide a reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D NMP03_02240 bchF; 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D NMP03_02115 bchC; chlorophyll synthesis pathway protein BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D NMP03_02265 geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D NMP03_08345 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sqo00130]
D NMP03_11165 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NMP03_11875 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D NMP03_11990 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D NMP03_01965 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D NMP03_11775 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D NMP03_00265 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D NMP03_07310 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sqo00900]
D NMP03_00900 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NMP03_04155 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NMP03_04405 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D NMP03_04670 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NMP03_13185 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NMP03_09160 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_00580 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NMP03_12975 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NMP03_04145 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NMP03_02265 geranylgeranyl diphosphate reductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:sqo00906]
D NMP03_12375 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D NMP03_12385 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D NMP03_06675 sterol desaturase family protein K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
D NMP03_02100 hydratase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D NMP03_02105 crtI; phytoene desaturase family protein K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D NMP03_02110 methyltransferase domain-containing protein K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:sqo00907]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NMP03_03365 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:sqo00523]
D NMP03_13470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NMP03_13480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NMP03_13485 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NMP03_13475 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D NMP03_13250 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D NMP03_13480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:sqo00946]
D NMP03_03340 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_03785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_08180 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D NMP03_03195 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:sqo00332]
D NMP03_07885 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NMP03_11820 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:sqo00261]
D NMP03_14115 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
D NMP03_01825 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D NMP03_01830 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D NMP03_11870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NMP03_05235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NMP03_03860 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NMP03_14820 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sqo00521]
D NMP03_14505 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NMP03_03415 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NMP03_11155 3'(2'),5'-bisphosphate nucleotidase CysQ K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NMP03_13470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NMP03_13480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NMP03_13485 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NMP03_13475 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:sqo00525]
D NMP03_13470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NMP03_13480 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:sqo00401]
D NMP03_13640 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_13635 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D NMP03_05510 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NMP03_05520 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NMP03_08260 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NMP03_15120 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NMP03_15125 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D NMP03_15165 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D NMP03_04980 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NMP03_04990 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D NMP03_03990 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NMP03_03995 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_16055 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_11570 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:sqo00998]
D NMP03_04005 acyl carrier protein K02078 acpP; acyl carrier protein
D NMP03_07895 acyl carrier protein K02078 acpP; acyl carrier protein
D NMP03_14200 sbnA; 2,3-diaminopropionate biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:sqo00999]
D NMP03_13530 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NMP03_12150 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D NMP03_03340 exo 1,3/1,4-beta-D-glucan glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_03785 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NMP03_08180 glycoside hydrolase family 3 C-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D NMP03_14200 sbnA; 2,3-diaminopropionate biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sqo00362]
D NMP03_04830 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D NMP03_12455 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D NMP03_10170 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:sqo00627]
D NMP03_02325 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-]
D NMP03_04835 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_06860 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_03840 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:sqo00364]
D NMP03_01235 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D NMP03_12115 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:sqo00625]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_09505 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sqo00361]
D NMP03_01235 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D NMP03_12115 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:sqo00623]
D NMP03_09275 aldehyde dehydrogenase family protein K20199 pchA; 4-hydroxybenzaldehyde dehydrogenase (NADP+) [EC:1.2.1.96]
D NMP03_01235 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D NMP03_12115 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:sqo00643]
D NMP03_07315 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D NMP03_10280 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D NMP03_11535 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D NMP03_04835 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NMP03_06860 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:sqo00930]
D NMP03_11740 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D NMP03_06815 acyl-CoA dehydrogenase family protein K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D NMP03_08085 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:sqo00626]
D NMP03_04875 Zn-dependent alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D NMP03_05920 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sqo03020]
D NMP03_01030 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NMP03_01025 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NMP03_01435 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NMP03_13790 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sqo03010]
D NMP03_06565 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NMP03_04125 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NMP03_01340 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NMP03_13245 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NMP03_01395 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NMP03_03980 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NMP03_01290 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NMP03_01380 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NMP03_00870 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NMP03_01305 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NMP03_01430 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NMP03_01285 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NMP03_01425 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NMP03_01375 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NMP03_12915 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NMP03_05280 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NMP03_01355 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NMP03_03975 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NMP03_01330 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NMP03_01975 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NMP03_01860 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NMP03_01075 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NMP03_01325 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NMP03_01310 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NMP03_01315 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NMP03_01370 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NMP03_01385 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NMP03_01060 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NMP03_03970 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NMP03_01065 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NMP03_01080 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NMP03_00875 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NMP03_01360 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NMP03_01405 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NMP03_01345 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NMP03_01440 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NMP03_01390 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NMP03_05250 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NMP03_15810 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NMP03_07855 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NMP03_01335 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NMP03_01320 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NMP03_01365 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NMP03_09250 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D NMP03_07860 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NMP03_10115 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NMP03_01350 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NMP03_01400 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NMP03_04180 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NMP03_12315 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NMP03_09765 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NMP03_08740 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NMP03_15805 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NMP03_11365 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NMP03_05595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sqo00970]
D NMP03_09050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NMP03_00350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NMP03_05955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NMP03_07180 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NMP03_14265 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NMP03_09305 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NMP03_03025 tRNA-His K14226 tRNA-His; tRNA His
D NMP03_08750 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NMP03_03060 tRNA-Met K14230 tRNA-Met; tRNA Met
D NMP03_07845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NMP03_08670 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NMP03_13500 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NMP03_13590 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NMP03_01130 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NMP03_05045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_12645 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_02925 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NMP03_02930 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NMP03_02920 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NMP03_04715 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NMP03_04440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NMP03_09240 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NMP03_09235 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NMP03_10560 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NMP03_04930 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NMP03_02835 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NMP03_04345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NMP03_04630 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NMP03_05980 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NMP03_12070 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NMP03_09870 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NMP03_12360 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D NMP03_08025 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NMP03_09655 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NMP03_14270 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NMP03_15820 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NMP03_15825 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NMP03_05080 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NMP03_01985 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sqo03060]
D NMP03_01410 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NMP03_01120 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NMP03_09680 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NMP03_09675 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NMP03_09685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NMP03_08725 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NMP03_05140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NMP03_01995 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NMP03_05285 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NMP03_03200 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D NMP03_05310 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NMP03_08000 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D NMP03_07990 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NMP03_10285 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NMP03_14845 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sqo04122]
D NMP03_03180 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_03185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_11420 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D NMP03_11620 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NMP03_06925 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NMP03_05120 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NMP03_06930 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D NMP03_01930 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D NMP03_05025 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NMP03_04695 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sqo03018]
D NMP03_05880 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NMP03_09825 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D NMP03_03630 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NMP03_12920 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NMP03_09640 RNB domain-containing ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NMP03_12395 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NMP03_12595 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NMP03_12120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NMP03_03510 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NMP03_01525 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NMP03_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NMP03_04375 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NMP03_04460 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NMP03_00405 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sqo03030]
D NMP03_12160 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NMP03_04095 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NMP03_05470 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NMP03_14105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NMP03_00505 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NMP03_03565 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NMP03_13620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NMP03_09170 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NMP03_14890 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NMP03_12525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NMP03_11090 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sqo03410]
D NMP03_14815 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NMP03_11470 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NMP03_02690 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D NMP03_01970 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NMP03_13605 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NMP03_09705 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NMP03_11750 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NMP03_07930 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NMP03_12020 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NMP03_12525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NMP03_06090 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NMP03_11090 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sqo03420]
D NMP03_05105 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NMP03_10875 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NMP03_13540 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D NMP03_00785 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D NMP03_05795 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NMP03_12525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NMP03_11090 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sqo03430]
D NMP03_06835 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NMP03_03960 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D NMP03_05795 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NMP03_10080 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NMP03_00585 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NMP03_12715 exonuclease domain-containing protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D NMP03_06090 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NMP03_13620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NMP03_04095 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NMP03_14105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NMP03_05470 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NMP03_12160 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NMP03_11090 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:sqo03440]
D NMP03_06090 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NMP03_13620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NMP03_14220 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NMP03_00805 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NMP03_04625 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D NMP03_03900 recA; recombinase RecA K03553 recA; recombination protein RecA
D NMP03_12525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NMP03_11320 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NMP03_11310 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NMP03_11330 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NMP03_05095 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NMP03_04095 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NMP03_14105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NMP03_05470 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NMP03_12160 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NMP03_10660 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:sqo03450]
D NMP03_11600 Ku protein K10979 ku; DNA end-binding protein Ku
D NMP03_11595 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:sqo03250]
D NMP03_06825 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sqo02010]
D NMP03_01010 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NMP03_01015 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D NMP03_01020 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NMP03_10395 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D NMP03_10390 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D NMP03_11675 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NMP03_11665 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NMP03_11670 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NMP03_01770 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D NMP03_01765 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D NMP03_01760 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D NMP03_01755 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NMP03_04080 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D NMP03_04085 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NMP03_02035 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D NMP03_10365 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NMP03_10370 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NMP03_01615 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NMP03_13670 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NMP03_07525 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_15625 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_12605 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
C 02060 Phosphotransferase system (PTS) [PATH:sqo02060]
D NMP03_04605 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D NMP03_04600 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D NMP03_11855 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D NMP03_12170 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:sqo03070]
D NMP03_06990 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D NMP03_07020 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D NMP03_03020 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NMP03_07005 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NMP03_09680 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NMP03_09675 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NMP03_01120 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NMP03_01410 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NMP03_09685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NMP03_08725 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NMP03_05140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NMP03_05310 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NMP03_01995 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NMP03_05285 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NMP03_08000 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D NMP03_07990 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D NMP03_15655 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sqo02020]
D NMP03_01775 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NMP03_01745 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NMP03_08405 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NMP03_02745 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D NMP03_01770 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D NMP03_06410 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_09955 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_13935 flagellin K02406 fliC; flagellin
D NMP03_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NMP03_00885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NMP03_01980 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NMP03_04585 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D NMP03_04580 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D NMP03_00925 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D NMP03_08410 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D NMP03_05605 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D NMP03_07705 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NMP03_07710 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D NMP03_08570 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D NMP03_08575 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D NMP03_10720 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NMP03_09215 type II secretion system F family protein K12511 tadC; tight adherence protein C
D NMP03_10590 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D NMP03_09480 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D NMP03_04395 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D NMP03_04390 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D NMP03_09485 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NMP03_04385 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D NMP03_04380 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_02400 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D NMP03_01620 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NMP03_05410 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NMP03_05420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NMP03_09770 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D NMP03_03885 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D NMP03_05435 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT
D NMP03_00245 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D NMP03_00325 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D NMP03_02610 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D NMP03_02615 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D NMP03_12435 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D NMP03_02150 pufM; photosynthetic reaction center subunit M K08929 pufM; photosynthetic reaction center M subunit
D NMP03_02145 pufL; photosynthetic reaction center subunit L K08928 pufL; photosynthetic reaction center L subunit
D NMP03_02140 pufA; light-harvesting antenna LH1, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D NMP03_02135 pufB; light-harvesting antenna LH1, beta subunit K08927 pufB; light-harvesting complex 1 beta chain
D NMP03_02205 puhA; photosynthetic reaction center subunit H K13991 puhA; photosynthetic reaction center H subunit
D NMP03_00210 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D NMP03_00215 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NMP03_00220 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D NMP03_02560 c-type cytochrome K08738 CYC; cytochrome c
D NMP03_11450 cytochrome c family protein K08738 CYC; cytochrome c
D NMP03_12850 c-type cytochrome K08738 CYC; cytochrome c
D NMP03_07640 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D NMP03_07635 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D NMP03_07630 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D NMP03_07625 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D NMP03_01870 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NMP03_01875 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NMP03_03095 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NMP03_13425 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NMP03_14595 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NMP03_10740 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D NMP03_01900 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D NMP03_01895 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D NMP03_08175 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D NMP03_15150 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:sqo04148]
D NMP03_03160 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D NMP03_00210 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sqo02024]
D NMP03_04375 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NMP03_04980 chorismate-binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NMP03_04990 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D NMP03_02825 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NMP03_15665 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D NMP03_14690 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D NMP03_15670 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D NMP03_14695 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D NMP03_15675 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D NMP03_14700 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D NMP03_15680 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D NMP03_14705 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D NMP03_15685 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D NMP03_14710 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D NMP03_15690 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D NMP03_14715 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D NMP03_15695 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D NMP03_14720 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D NMP03_15700 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D NMP03_14725 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D NMP03_15705 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D NMP03_00095 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00895 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D NMP03_12025 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D NMP03_12660 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D NMP03_05090 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NMP03_13800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NMP03_08725 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NMP03_01120 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NMP03_01410 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NMP03_09685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NMP03_05140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NMP03_05310 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NMP03_01995 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NMP03_05285 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:sqo02030]
D NMP03_05420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NMP03_05410 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NMP03_13915 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NMP03_13880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NMP03_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
C 02040 Flagellar assembly [PATH:sqo02040]
D NMP03_13925 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D NMP03_13915 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NMP03_13905 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NMP03_13880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NMP03_13870 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D NMP03_13865 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NMP03_13945 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D NMP03_13980 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D NMP03_13985 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D NMP03_13995 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D NMP03_14000 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D NMP03_14005 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D NMP03_14010 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D NMP03_14015 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D NMP03_13935 flagellin K02406 fliC; flagellin
D NMP03_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NMP03_03560 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NMP03_01620 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NMP03_03630 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:sqo04980]
D NMP03_10190 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D NMP03_08495 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D NMP03_06745 dihydropteroate synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D NMP03_06750 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sqo01501]
D NMP03_05755 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NMP03_08015 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D NMP03_05605 beta-lactamase family protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D NMP03_06620 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D NMP03_06625 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D NMP03_03195 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NMP03_13810 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NMP03_13805 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NMP03_13800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NMP03_09835 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NMP03_03940 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:sqo01502]
D NMP03_00690 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NMP03_06735 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NMP03_00655 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NMP03_00660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NMP03_00675 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sqo01503]
D NMP03_06410 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_09955 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_06825 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D NMP03_13810 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NMP03_13805 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sqo01000]
C 01001 Protein kinases [BR:sqo01001]
D NMP03_01775 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NMP03_04585 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D NMP03_07705 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NMP03_04395 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D NMP03_04385 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D NMP03_03885 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D NMP03_02610 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sqo01009]
D NMP03_05190 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NMP03_06025 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:sqo01002]
D NMP03_00525 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NMP03_01455 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NMP03_07525 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_15625 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_05860 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D NMP03_15760 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D NMP03_01810 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D NMP03_03140 amidotransferase 1, exosortase A system-associated K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NMP03_15045 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D NMP03_09570 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D NMP03_11740 DJ-1/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D NMP03_10245 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NMP03_14050 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D NMP03_03880 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NMP03_00535 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D NMP03_13340 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D NMP03_04500 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NMP03_04960 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NMP03_01500 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NMP03_05890 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D NMP03_09490 M20/M25/M40 family metallo-hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D NMP03_02020 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D NMP03_06335 amidohydrolase K12941 abgB; aminobenzoyl-glutamate utilization protein B
D NMP03_09475 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NMP03_13510 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NMP03_11835 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NMP03_12490 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D NMP03_04160 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D NMP03_06620 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D NMP03_10465 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D NMP03_14210 P1 family peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D NMP03_06410 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_09955 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_01445 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D NMP03_05240 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D NMP03_13520 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D NMP03_04330 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NMP03_02960 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NMP03_02990 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D NMP03_05035 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NMP03_10285 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NMP03_14845 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NMP03_11785 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D NMP03_13080 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D NMP03_10500 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D NMP03_11270 isoaspartyl peptidase/L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D NMP03_00090 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D NMP03_11160 metallopeptidase TldD-related protein K03592 pmbA; PmbA protein
D NMP03_06480 TldD/PmbA family protein K03568 tldD; TldD protein
D NMP03_12555 tldD; metalloprotease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:sqo01003]
D NMP03_00815 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D NMP03_01225 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D NMP03_05455 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NMP03_09835 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NMP03_14625 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D NMP03_14635 glycosyltransferase K16564 exoU; succinoglycan biosynthesis protein ExoU [EC:2.4.-.-]
D NMP03_02340 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sqo01005]
D NMP03_11220 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sqo01011]
D NMP03_13195 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NMP03_00685 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NMP03_00680 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NMP03_00665 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NMP03_00650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NMP03_00690 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NMP03_06735 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NMP03_13315 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D NMP03_00660 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NMP03_00675 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NMP03_15740 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NMP03_03280 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NMP03_01990 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NMP03_09835 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D NMP03_03940 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D NMP03_04330 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D NMP03_05455 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D NMP03_02005 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D NMP03_04320 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D NMP03_04015 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D NMP03_01480 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D NMP03_14235 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:sqo01004]
D NMP03_03990 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D NMP03_12325 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D NMP03_04010 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D NMP03_03995 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_16055 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NMP03_04175 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D NMP03_11570 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D NMP03_11865 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D NMP03_02385 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D NMP03_04850 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D NMP03_01265 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D NMP03_07805 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D NMP03_08460 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D NMP03_00095 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_01140 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D NMP03_12320 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D NMP03_13320 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins [BR:sqo01008]
D NMP03_14115 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
C 01006 Prenyltransferases [BR:sqo01006]
D NMP03_00580 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D NMP03_12975 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D NMP03_04145 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D NMP03_12375 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D NMP03_06030 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NMP03_11165 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D NMP03_10320 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NMP03_02255 chlG; chlorophyll synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:sqo01007]
D NMP03_12360 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D NMP03_05045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_12645 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_10200 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D NMP03_05080 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NMP03_01985 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NMP03_02835 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NMP03_08025 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NMP03_04345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NMP03_09870 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NMP03_05980 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NMP03_12070 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NMP03_04440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NMP03_14270 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NMP03_09240 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NMP03_09235 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NMP03_04930 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NMP03_09655 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NMP03_10560 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NMP03_04715 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NMP03_15820 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NMP03_15825 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NMP03_12295 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NMP03_11190 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D NMP03_13635 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NMP03_02175 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NMP03_13305 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D NMP03_07900 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NMP03_14065 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D NMP03_00135 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NMP03_14055 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D NMP03_07175 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NMP03_12300 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D NMP03_10420 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sqo00194]
D NMP03_10715 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NMP03_10710 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NMP03_10700 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NMP03_10695 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NMP03_10690 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NMP03_00750 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NMP03_00745 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NMP03_00740 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
D NMP03_02145 pufL; photosynthetic reaction center subunit L K08928 pufL; photosynthetic reaction center L subunit
D NMP03_02150 pufM; photosynthetic reaction center subunit M K08929 pufM; photosynthetic reaction center M subunit
D NMP03_02205 puhA; photosynthetic reaction center subunit H K13991 puhA; photosynthetic reaction center H subunit
D NMP03_02140 pufA; light-harvesting antenna LH1, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D NMP03_02135 pufB; light-harvesting antenna LH1, beta subunit K08927 pufB; light-harvesting complex 1 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sqo03000]
D NMP03_10685 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D NMP03_00835 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D NMP03_06915 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NMP03_07680 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NMP03_10470 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D NMP03_03790 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NMP03_08185 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NMP03_10925 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NMP03_07435 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D NMP03_10840 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NMP03_00895 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D NMP03_05535 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D NMP03_05630 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D NMP03_05010 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D NMP03_08515 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D NMP03_06800 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D NMP03_07270 mntR; manganese-binding transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D NMP03_06625 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D NMP03_03500 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NMP03_06250 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D NMP03_07120 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D NMP03_09590 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NMP03_11910 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D NMP03_01485 metal/formaldehyde-sensitive transcriptional repressor K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D NMP03_14415 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D NMP03_11045 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D NMP03_06215 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_12085 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_15535 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_15930 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D NMP03_10600 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D NMP03_05325 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D NMP03_05345 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D NMP03_06220 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D NMP03_14510 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D NMP03_05195 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D NMP03_04915 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NMP03_13260 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:sqo03021]
D NMP03_01435 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NMP03_01030 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NMP03_01025 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NMP03_13790 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NMP03_03560 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D NMP03_08130 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NMP03_06365 RNA polymerase sigma factor K24073 cnrH; RNA polymerase sigma factor CnrH
D NMP03_05450 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D NMP03_01620 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D NMP03_12880 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NMP03_11015 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D NMP03_01115 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NMP03_04915 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NMP03_03595 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D NMP03_03850 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D NMP03_12120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:sqo03019]
D NMP03_12250 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D NMP03_09825 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D NMP03_14840 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NMP03_03510 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NMP03_09640 RNB domain-containing ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NMP03_12395 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NMP03_12595 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NMP03_03630 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NMP03_12920 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NMP03_12120 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NMP03_01525 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NMP03_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NMP03_04375 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NMP03_04460 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NMP03_00405 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D NMP03_05880 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D NMP03_04595 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D NMP03_12960 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:sqo03011]
D NMP03_06565 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D NMP03_04125 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NMP03_01340 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D NMP03_13245 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NMP03_01395 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NMP03_03980 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NMP03_01290 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NMP03_01380 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NMP03_00870 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NMP03_01305 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NMP03_01430 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NMP03_01285 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NMP03_01425 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NMP03_01375 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D NMP03_12915 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D NMP03_05280 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NMP03_01355 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NMP03_03975 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D NMP03_01330 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NMP03_01975 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NMP03_01860 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D NMP03_01075 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NMP03_01325 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NMP03_01310 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NMP03_01315 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NMP03_01370 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NMP03_01385 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NMP03_03970 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NMP03_01065 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NMP03_01080 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NMP03_01060 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NMP03_00875 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NMP03_01360 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NMP03_01405 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NMP03_01345 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NMP03_01440 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NMP03_01390 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D NMP03_05250 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NMP03_15810 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NMP03_07855 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NMP03_01335 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NMP03_01320 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NMP03_01365 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NMP03_07860 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NMP03_10115 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NMP03_01350 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NMP03_01400 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NMP03_04180 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NMP03_12315 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NMP03_09765 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D NMP03_08740 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D NMP03_15805 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D NMP03_11365 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D NMP03_09250 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D NMP03_05595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sqo03009]
D NMP03_14840 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NMP03_12250 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D NMP03_14830 era; GTPase Era K03595 era; GTPase
D NMP03_07880 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D NMP03_04915 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D NMP03_12880 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D NMP03_11015 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D NMP03_01115 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D NMP03_04520 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NMP03_04530 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NMP03_12495 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NMP03_05770 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NMP03_11175 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NMP03_00635 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NMP03_10625 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NMP03_07140 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D NMP03_14245 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NMP03_13775 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D NMP03_11795 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NMP03_10355 class I SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D NMP03_14085 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NMP03_04640 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NMP03_05765 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NMP03_08860 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D NMP03_05445 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NMP03_04955 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D NMP03_09825 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D NMP03_02910 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NMP03_12395 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NMP03_05495 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NMP03_08360 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D NMP03_04370 hflX; GTPase HflX K03665 hflX; GTPase
D NMP03_00005 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NMP03_11205 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NMP03_12895 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D NMP03_12875 rimP; ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D NMP03_11800 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D NMP03_10810 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D NMP03_12165 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D NMP03_09270 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:sqo03016]
D NMP03_05045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_12645 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_09655 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NMP03_09870 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NMP03_12070 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NMP03_04345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NMP03_08025 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NMP03_04440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NMP03_04715 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NMP03_10560 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NMP03_04930 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NMP03_02835 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NMP03_05980 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NMP03_14270 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NMP03_15820 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NMP03_15825 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NMP03_05080 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NMP03_01985 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NMP03_08955 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NMP03_06840 tRNA (guanine(46)-N(7))-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NMP03_04635 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NMP03_12910 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NMP03_03180 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_03185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_00005 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NMP03_06030 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NMP03_12105 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D NMP03_12100 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NMP03_01820 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D NMP03_08735 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NMP03_05400 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D NMP03_10605 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NMP03_01600 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NMP03_04445 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NMP03_12360 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D NMP03_09240 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D NMP03_09235 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D NMP03_10200 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D NMP03_10105 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NMP03_06955 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NMP03_04400 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D NMP03_10830 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NMP03_05305 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D NMP03_03675 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D NMP03_05255 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NMP03_00205 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D NMP03_04610 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D NMP03_11620 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D NMP03_00040 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D NMP03_06870 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D NMP03_00565 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D NMP03_00155 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NMP03_15440 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D NMP03_15445 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D NMP03_00160 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NMP03_15450 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D NMP03_11430 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D NMP03_08985 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D NMP03_00550 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NMP03_12475 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NMP03_05180 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NMP03_09640 RNB domain-containing ribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1]
D NMP03_12920 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NMP03_05260 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:sqo03012]
D NMP03_12890 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NMP03_10565 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NMP03_00600 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D NMP03_04130 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D NMP03_01300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NMP03_01295 fusA; elongation factor G K02355 fusA; elongation factor G
D NMP03_14275 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NMP03_04140 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D NMP03_14280 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NMP03_09255 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NMP03_10995 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NMP03_03410 efp; elongation factor P K02356 efp; elongation factor P
D NMP03_09840 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D NMP03_15835 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D NMP03_00280 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:sqo03110]
D NMP03_01205 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D NMP03_10040 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NMP03_02965 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NMP03_10510 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D NMP03_01525 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NMP03_07545 molecular chaperone HscC K04045 hscC; molecular chaperone HscC
D NMP03_11995 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D NMP03_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NMP03_01530 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NMP03_00145 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D NMP03_10595 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D NMP03_04070 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D NMP03_15945 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D NMP03_06410 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_09955 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D NMP03_11835 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NMP03_00745 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NMP03_01995 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NMP03_06825 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D NMP03_05155 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D NMP03_12415 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D NMP03_08550 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D NMP03_06630 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NMP03_02055 redoxin family protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:sqo04131]
D NMP03_04490 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NMP03_12250 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_03370 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NMP03_11385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NMP03_11355 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:sqo03032]
D NMP03_09170 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NMP03_02995 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_06200 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_07790 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_09420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_12330 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NMP03_06275 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_06570 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_14775 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_01980 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NMP03_00505 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NMP03_03565 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NMP03_13620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NMP03_04095 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NMP03_14105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NMP03_12160 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NMP03_05470 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NMP03_14890 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NMP03_12525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NMP03_11090 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NMP03_03690 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NMP03_14230 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NMP03_00395 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NMP03_00115 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NMP03_09575 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NMP03_13330 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sqo03036]
D NMP03_14840 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_02995 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_06200 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_07790 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_09420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_12330 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NMP03_06275 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_06570 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_14775 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_01980 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NMP03_07850 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ
D NMP03_01560 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D NMP03_04375 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D NMP03_11490 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D NMP03_08010 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D NMP03_08005 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D NMP03_00700 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NMP03_13670 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NMP03_12000 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D NMP03_00670 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D NMP03_00705 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NMP03_16010 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D NMP03_13810 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NMP03_03955 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NMP03_03935 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D NMP03_10025 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D NMP03_12090 ParA family protein K03496 parA; chromosome partitioning protein
D NMP03_06215 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_12085 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_15535 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_00395 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NMP03_00115 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NMP03_12100 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D NMP03_03675 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D NMP03_10645 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D NMP03_08585 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D NMP03_09970 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NMP03_08720 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:sqo03400]
D NMP03_05870 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D NMP03_02690 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D NMP03_11470 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NMP03_14815 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NMP03_08565 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NMP03_01940 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D NMP03_10685 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D NMP03_11425 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D NMP03_09705 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NMP03_11750 UdgX family uracil-DNA binding protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D NMP03_13605 DNA-3-methyladenine glycosylase 2 family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D NMP03_01970 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NMP03_07930 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NMP03_12020 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NMP03_06090 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D NMP03_11090 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NMP03_12525 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D NMP03_10875 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D NMP03_13540 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D NMP03_00785 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D NMP03_05795 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NMP03_01030 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NMP03_01025 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NMP03_01435 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NMP03_13790 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NMP03_05105 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NMP03_06835 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D NMP03_03960 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D NMP03_10080 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NMP03_00585 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NMP03_12715 exonuclease domain-containing protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D NMP03_04095 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NMP03_14105 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NMP03_12160 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NMP03_05470 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NMP03_13620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NMP03_03900 recA; recombinase RecA K03553 recA; recombination protein RecA
D NMP03_11320 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NMP03_11310 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NMP03_11330 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NMP03_10660 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NMP03_08640 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NMP03_14220 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D NMP03_05095 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NMP03_00805 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D NMP03_04625 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D NMP03_08820 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D NMP03_09950 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D NMP03_11600 Ku protein K10979 ku; DNA end-binding protein Ku
D NMP03_11595 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D NMP03_03690 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NMP03_14230 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NMP03_09575 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NMP03_13330 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NMP03_02995 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_06200 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_07790 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_09420 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D NMP03_12330 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D NMP03_06275 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_06570 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_14775 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D NMP03_12595 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D NMP03_12275 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D NMP03_05035 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D NMP03_07300 DNA polymerase Y family protein K14161 imuB; protein ImuB
D NMP03_07295 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D NMP03_12350 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NMP03_15885 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D NMP03_12800 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NMP03_10780 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:sqo03029]
D NMP03_00215 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D NMP03_12890 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NMP03_10565 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NMP03_04130 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D NMP03_01300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NMP03_01295 fusA; elongation factor G K02355 fusA; elongation factor G
D NMP03_01645 helicase-related protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D NMP03_14830 era; GTPase Era K03595 era; GTPase
D NMP03_05080 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NMP03_12070 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NMP03_04440 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NMP03_08025 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NMP03_02925 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NMP03_02930 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NMP03_02920 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NMP03_13620 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D NMP03_01525 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NMP03_10595 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D NMP03_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NMP03_15945 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D NMP03_01530 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D NMP03_03180 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_03185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_06630 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D NMP03_09970 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NMP03_10320 heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D NMP03_10330 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D NMP03_00885 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D NMP03_08725 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sqo02000]
D NMP03_15080 ABC transporter ATP-binding protein/permease K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D NMP03_07525 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_15625 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_12605 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D NMP03_09625 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NMP03_14580 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D NMP03_01700 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D NMP03_10475 ABC transporter transmembrane domain-containing protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D NMP03_01010 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D NMP03_01015 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D NMP03_01020 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NMP03_10395 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D NMP03_10390 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D NMP03_11675 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D NMP03_11665 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D NMP03_11670 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D NMP03_11680 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D NMP03_01770 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D NMP03_01765 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D NMP03_01760 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D NMP03_01755 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NMP03_00955 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D NMP03_00960 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D NMP03_01615 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D NMP03_04080 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D NMP03_04085 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D NMP03_02035 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D NMP03_10365 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D NMP03_10370 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D NMP03_13670 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NMP03_00130 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NMP03_07700 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NMP03_09800 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D NMP03_07695 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NMP03_08990 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NMP03_09805 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NMP03_12545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NMP03_02395 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NMP03_16115 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NMP03_02390 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NMP03_16120 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NMP03_00060 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D NMP03_13680 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D NMP03_08190 sugar porter family MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D NMP03_05930 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D NMP03_01855 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D NMP03_07420 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D NMP03_08140 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D NMP03_08240 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D NMP03_09330 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D NMP03_02210 BCD family MFS transporter K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D NMP03_02260 BCD family MFS transporter K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D NMP03_05755 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D NMP03_09905 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D NMP03_06425 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D NMP03_14410 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D NMP03_09610 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D NMP03_11855 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D NMP03_04605 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D NMP03_04600 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D NMP03_12170 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D NMP03_12585 ammonium transporter K03320 amt; ammonium transporter, Amt family
D NMP03_01240 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_02030 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_04730 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_11040 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_15770 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D NMP03_12945 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D NMP03_12265 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D NMP03_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NMP03_00455 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D NMP03_00460 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NMP03_00465 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D NMP03_11300 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D NMP03_11295 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D NMP03_13595 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D NMP03_08855 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D NMP03_12355 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D NMP03_10095 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NMP03_13570 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor
D NMP03_00935 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D NMP03_00915 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NMP03_04075 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NMP03_07430 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D NMP03_13800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NMP03_03095 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NMP03_13425 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NMP03_14595 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D NMP03_08825 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D NMP03_10805 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein
D NMP03_15180 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D NMP03_11610 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D NMP03_03965 ZIP family zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D NMP03_13805 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NMP03_00770 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D NMP03_08030 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D NMP03_05090 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D NMP03_02980 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D NMP03_02400 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D NMP03_12520 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D NMP03_08625 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D NMP03_04710 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D NMP03_06740 cation:proton antiporter K26731 CHX; K+:H+ antiporter
D NMP03_03915 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D NMP03_03910 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D NMP03_11970 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D NMP03_07275 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D NMP03_05615 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D NMP03_08755 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D NMP03_08760 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D NMP03_08765 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D NMP03_08770 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D NMP03_08775 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D NMP03_08780 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D NMP03_01990 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D NMP03_03050 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D NMP03_15815 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D NMP03_00355 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D NMP03_09280 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D NMP03_11240 MarC family protein K05595 marC; multiple antibiotic resistance protein
D NMP03_00670 putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D NMP03_11285 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D NMP03_11000 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D NMP03_14405 HlyD family efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D NMP03_02355 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system
D NMP03_13810 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NMP03_01050 L,D-transpeptidase family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D NMP03_12700 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D NMP03_12705 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B
D NMP03_02075 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D NMP03_02270 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D NMP03_07985 entericidin A/B family lipoprotein K16348 ecnB; entericidin B
D NMP03_02050 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D NMP03_06385 copD; copper homeostasis membrane protein CopD K07245 pcoD; copper resistance protein D
D NMP03_06380 copC; copper homeostasis periplasmic binding protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:sqo02044]
D NMP03_07525 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_15625 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D NMP03_03115 AAA family ATPase K02450 gspA; general secretion pathway protein A
D NMP03_03020 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NMP03_07005 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D NMP03_06990 type II secretion system F family protein K02455 gspF; general secretion pathway protein F
D NMP03_07020 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D NMP03_00525 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NMP03_10720 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NMP03_09215 type II secretion system F family protein K12511 tadC; tight adherence protein C
D NMP03_08570 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D NMP03_08575 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D NMP03_11250 YggT family protein K02221 yggT; YggT family protein
D NMP03_13945 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D NMP03_13905 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NMP03_13880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NMP03_13870 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D NMP03_13865 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NMP03_15655 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D NMP03_15665 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D NMP03_14690 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D NMP03_15670 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D NMP03_14695 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D NMP03_15675 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D NMP03_14700 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D NMP03_15680 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D NMP03_14715 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D NMP03_15695 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D NMP03_14720 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D NMP03_15700 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D NMP03_14725 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D NMP03_15705 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D NMP03_14705 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D NMP03_15685 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D NMP03_14710 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D NMP03_15690 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D NMP03_05140 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NMP03_01995 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D NMP03_09680 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NMP03_01120 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D NMP03_09675 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NMP03_01410 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NMP03_05285 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NMP03_05310 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D NMP03_09685 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NMP03_08725 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NMP03_08000 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D NMP03_07990 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:sqo02042]
D NMP03_10095 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:sqo02022]
D NMP03_01775 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D NMP03_01745 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D NMP03_04585 sensor histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D NMP03_04580 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D NMP03_01710 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D NMP03_02700 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D NMP03_05690 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D NMP03_06405 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D NMP03_07705 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NMP03_07710 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D NMP03_11105 LytTR family DNA-binding domain-containing protein K02477 K02477; two-component system, LytTR family, response regulator
D NMP03_04395 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D NMP03_04390 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D NMP03_04385 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D NMP03_04380 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D NMP03_01675 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D NMP03_05420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NMP03_09770 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D NMP03_03885 response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D NMP03_00245 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D NMP03_00325 response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D NMP03_02610 PAS domain S-box protein K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D NMP03_02615 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ
D NMP03_09325 ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D NMP03_09320 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:sqo02035]
D NMP03_05410 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D NMP03_05420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D NMP03_13905 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D NMP03_13870 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D NMP03_13865 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D NMP03_13945 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D NMP03_13915 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D NMP03_13880 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D NMP03_14015 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D NMP03_14010 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D NMP03_13925 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D NMP03_13980 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D NMP03_13985 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D NMP03_14000 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D NMP03_14005 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D NMP03_13995 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D NMP03_13935 flagellin K02406 fliC; flagellin
D NMP03_14035 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D NMP03_00525 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NMP03_08570 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D NMP03_08575 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D NMP03_10720 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sqo04812]
D NMP03_03955 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NMP03_00705 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NMP03_00700 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D NMP03_10025 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D NMP03_12090 ParA family protein K03496 parA; chromosome partitioning protein
D NMP03_06215 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_12085 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NMP03_15535 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sqo04147]
D NMP03_03390 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D NMP03_03630 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NMP03_03370 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NMP03_03380 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NMP03_11355 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NMP03_06825 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D NMP03_01500 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D NMP03_15940 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NMP03_01525 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D NMP03_14850 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NMP03_05240 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D NMP03_04550 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NMP03_01300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D NMP03_12250 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
D NMP03_08955 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NMP03_04200 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NMP03_00095 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00590 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NMP03_00520 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_06725 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_09600 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_13000 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NMP03_05190 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D NMP03_01415 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NMP03_00225 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NMP03_13820 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NMP03_11390 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NMP03_14160 pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D NMP03_05600 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D NMP03_04760 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NMP03_04790 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NMP03_09485 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D NMP03_05975 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NMP03_07310 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D NMP03_10380 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D NMP03_08405 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NMP03_10415 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NMP03_12510 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NMP03_01270 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_15975 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NMP03_12615 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D NMP03_04040 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NMP03_04970 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NMP03_11385 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:sqo02048]
D NMP03_14895 DNA methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D NMP03_13550 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D NMP03_11915 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE
D NMP03_11910 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D NMP03_11925 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D NMP03_11920 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D NMP03_05345 pspC; envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D NMP03_05260 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D NMP03_05265 AbrB family transcriptional regulator K18829 mvpT; antitoxin VapB
D NMP03_10815 type II toxin-antitoxin system VapC family toxin K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D NMP03_00705 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NMP03_03955 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D NMP03_00395 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D NMP03_00115 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D NMP03_05045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_12645 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NMP03_05100 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D NMP03_03180 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D NMP03_03185 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:sqo04090]
D NMP03_05240 S9 family peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:sqo01504]
D NMP03_11110 aac(3); aminoglycoside 3-N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D NMP03_06620 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D NMP03_06625 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D NMP03_03195 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D NMP03_13810 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D NMP03_13805 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D NMP03_13800 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D NMP03_02355 efflux RND transporter periplasmic adaptor subunit K18298 mexE; membrane fusion protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sqo00537]
D NMP03_08405 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D NMP03_01500 dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sqo03100]
D NMP03_09050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NMP03_00350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NMP03_05955 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NMP03_07180 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NMP03_14265 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NMP03_09305 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NMP03_03025 tRNA-His K14226 tRNA-His; tRNA His
D NMP03_08750 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NMP03_03060 tRNA-Met K14230 tRNA-Met; tRNA Met
D NMP03_07845 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NMP03_08670 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NMP03_13500 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NMP03_13590 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NMP03_01130 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NMP03_05595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NMP03_03200 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D NMP03_05400 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NMP03_11745 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D NMP03_14425 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D NMP03_05525 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D NMP03_12815 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D NMP03_12865 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D NMP03_12870 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D NMP03_03215 Gfo/Idh/MocA family oxidoreductase K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28]
D NMP03_00530 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D NMP03_03150 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D NMP03_04680 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D NMP03_09055 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D NMP03_01215 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NMP03_06645 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NMP03_09495 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D NMP03_03335 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D NMP03_00015 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D NMP03_12285 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D NMP03_09005 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D NMP03_12220 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D NMP03_11085 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D NMP03_01575 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D NMP03_04210 alternative oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D NMP03_02405 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D NMP03_07945 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NMP03_03330 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D NMP03_00260 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D NMP03_13575 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D NMP03_14195 acyl-CoA/acyl-ACP dehydrogenase K27592 evdC; L-evernosamine nitrososynthase [EC:1.14.13.187]
D NMP03_12775 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D NMP03_05620 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D NMP03_01055 SDR family NAD(P)-dependent oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D NMP03_05995 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D NMP03_12735 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D NMP03_14180 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D NMP03_11380 GNAT family N-acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D NMP03_01580 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D NMP03_01170 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D NMP03_08055 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D NMP03_10145 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NMP03_12780 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D NMP03_12140 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D NMP03_02460 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D NMP03_02850 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D NMP03_09425 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D NMP03_11305 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NMP03_09920 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D NMP03_04350 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NMP03_08165 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D NMP03_15135 glycoside hydrolase family 11 protein K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D NMP03_07380 arabinan endo-1,5-alpha-L-arabinosidase K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99]
D NMP03_08230 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D NMP03_05405 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NMP03_04620 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NMP03_08545 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D NMP03_06495 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NMP03_07100 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NMP03_07135 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D NMP03_12260 peptidylprolyl isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D NMP03_04825 acyl--CoA ligase K25775 casG; steroid-24-oyl-CoA synthetase [EC:6.2.1.-]
D NMP03_07610 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D NMP03_04195 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D NMP03_10915 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D NMP03_03190 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D NMP03_13610 2Fe-2S iron-sulfur cluster-binding protein K04755 fdx; ferredoxin, 2Fe-2S
D NMP03_01655 ferredoxin family protein K05524 fdxA; ferredoxin
D NMP03_12620 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D NMP03_12035 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D NMP03_01960 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D NMP03_04420 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D NMP03_02620 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NMP03_01150 cold shock domain-containing protein K03704 cspA; cold shock protein
D NMP03_01585 cold-shock protein K03704 cspA; cold shock protein
D NMP03_10725 cold-shock protein K03704 cspA; cold shock protein
D NMP03_12580 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D NMP03_15875 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D NMP03_13205 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D NMP03_02950 tig; trigger factor K03545 tig; trigger factor
D NMP03_03870 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D NMP03_08745 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D NMP03_16105 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D NMP03_00720 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D NMP03_10630 YraN family protein K07460 yraN; putative endonuclease
D NMP03_14835 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D NMP03_13325 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D NMP03_08655 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D NMP03_07715 transposase K07498 K07498; putative transposase
D NMP03_07725 IS6 family transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D NMP03_05335 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D NMP03_10575 type I restriction enzyme HsdR N-terminal domain-containing protein K07504 K07504; predicted type IV restriction endonuclease
D NMP03_05465 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NMP03_00035 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NMP03_08960 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D NMP03_16140 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D NMP03_05780 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D NMP03_02370 sodium/sugar symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D NMP03_11265 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D NMP03_05315 septation protein IspZ K06190 ispZ; intracellular septation protein
D NMP03_11790 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D NMP03_11975 carbon starvation protein A K06200 cstA; carbon starvation protein
D NMP03_11140 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D NMP03_08200 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D NMP03_10825 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D NMP03_01100 AAA family ATPase K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D NMP03_04560 NfeD family protein K07340 ybbJ; inner membrane protein
D NMP03_16125 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D NMP03_02045 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D NMP03_02060 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D NMP03_01750 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D NMP03_07690 TerC family protein K05794 terC; tellurite resistance protein TerC
D NMP03_00880 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D NMP03_00830 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D NMP03_06355 copper resistance protein B K07233 pcoB; copper resistance protein B
D NMP03_07600 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NMP03_11880 tRNA-binding protein K06878 K06878; tRNA-binding protein
D NMP03_09090 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D NMP03_09985 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D NMP03_11360 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D NMP03_07935 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D NMP03_00065 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D NMP03_05370 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D NMP03_10905 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D NMP03_05610 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D NMP03_05480 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
D NMP03_11890 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D NMP03_09115 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D NMP03_01685 ATP-binding protein K06923 K06923; uncharacterized protein
D NMP03_09975 CoA-binding protein K06929 K06929; uncharacterized protein
D NMP03_00295 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D NMP03_15895 pdeM; ligase-associated DNA damage response endonuclease PdeM K06953 K06953; uncharacterized protein
D NMP03_09795 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D NMP03_10785 VOC family protein K06991 K06991; uncharacterized protein
D NMP03_11055 VOC family protein K06996 K06996; uncharacterized protein
D NMP03_03175 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D NMP03_02635 AAA family ATPase K07028 K07028; uncharacterized protein
D NMP03_07870 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D NMP03_09085 zinc metallopeptidase K07054 K07054; uncharacterized protein
D NMP03_01460 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein
D NMP03_06205 nucleotidyltransferase and HEPN domain-containing protein K07076 K07076; uncharacterized protein
D NMP03_15355 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D NMP03_01625 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NMP03_05020 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NMP03_06910 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NMP03_12635 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NMP03_14080 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D NMP03_07060 PhoX family phosphatase K07093 K07093; uncharacterized protein
D NMP03_14370 metallophosphoesterase K07098 K07098; uncharacterized protein
D NMP03_10035 hypothetical protein K07126 K07126; uncharacterized protein
D NMP03_06520 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D NMP03_12410 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D NMP03_08730 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D NMP03_01155 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D NMP03_03575 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D NMP03_12205 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D NMP03_02295 YqcI/YcgG family protein K09190 K09190; uncharacterized protein
D NMP03_11905 cupin domain-containing protein K09705 K09705; uncharacterized protein
D NMP03_09075 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D NMP03_00485 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D NMP03_12680 YbaN family protein K09790 K09790; uncharacterized protein
D NMP03_12405 Trm112 family protein K09791 K09791; uncharacterized protein
D NMP03_08790 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D NMP03_11640 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D NMP03_10980 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D NMP03_11405 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D NMP03_04950 DMT family protein K09922 K09922; uncharacterized protein
D NMP03_12795 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D NMP03_11350 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D NMP03_14475 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D NMP03_02290 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein
D NMP03_09510 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D NMP03_14880 DUF1272 domain-containing protein K09984 K09984; uncharacterized protein
D NMP03_08915 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein
D NMP03_00415 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D NMP03_01230 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D NMP03_03530 VWA domain-containing protein K09989 K09989; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 29, 2024