+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Serratia sp. AS13

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ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases D SerAS13_2822 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SerAS13_4695 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SerAS13_2821 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SerAS13_0510 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SerAS13_3432 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C SerAS13_0281 restriction endonuclease K07448 mrr; restriction system protein C SerAS13_3255 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok D SerAS13_3472 Hok/gef cell toxic protein K18920 hokA; protein HokA D SerAS13_0871 Hok/gef cell toxic protein K18919 hokC_D; protein HokC/D D SerAS13_0873 Hok/gef cell toxic protein K18919 hokC_D; protein HokC/D D SerAS13_4184 Hok/gef cell toxic protein K18919 hokC_D; protein HokC/D C SymE-SymR D SerAS13_4343 Domain of unknown function DUF1813 HSP20-like protein K19048 symE; toxic protein SymE D SerAS13_4504 Domain of unknown function DUF1813 HSP20-like protein K19048 symE; toxic protein SymE C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D SerAS13_0015 CopG-like domain-containing protein DNA-binding protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB C YafQ-dinJ D SerAS13_3736 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM C HipA-HipB D SerAS13_0593 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D SerAS13_3310 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D SerAS13_0504 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D SerAS13_0503 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB D SerAS13_3592 hypothetical protein K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB D SerAS13_1046 hemolysin expression modulating family protein K05839 hha; haemolysin expression modulating protein D SerAS13_1047 Biofilm formation regulator protein YbaJ K19162 tomB; hha toxicity modulator TomB C PspC-PspB D SerAS13_2620 phage shock protein C, PspC K03973 pspC; phage shock protein C D SerAS13_2621 phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA D SerAS13_1525 CcdB protein K19163 ccdB; toxin CcdB D SerAS13_1524 Post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA C ParE-ParD D SerAS13_1403 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D SerAS13_1404 addiction module antidote protein, CC2985 family K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB D SerAS13_3766 hypothetical protein K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D SerAS13_4712 PilT protein domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D SerAS13_2680 regulatory protein Mnt K21495 fitA; antitoxin FitA D SerAS13_4711 hypothetical protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D SerAS13_1839 biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS D SerAS13_1371 protein of unknown function DUF1471 K12151 bhsA; multiple stress resistance protein BhsA D SerAS13_1372 protein of unknown function DUF1471 K12151 bhsA; multiple stress resistance protein BhsA D SerAS13_1458 protein of unknown function DUF1471 K12151 bhsA; multiple stress resistance protein BhsA D SerAS13_0700 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SerAS13_4516 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D SerAS13_4375 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D SerAS13_4379 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SerAS13_3612 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D SerAS13_0327 protein of unknown function DUF1219 K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins C CptA-CptB D SerAS13_4106 protein of unknown function DUF1434 K19168 cptA; toxin CptA D SerAS13_4107 protein of unknown function DUF339 K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C SerAS13_3832 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023