+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptomyces rapamycinicus
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D M271_15890 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D M271_31100 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C M271_32500 GTPase Era K03595 era; GTPase
C M271_32250 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C M271_02730 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
C M271_35985 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
C M271_44960 suppressor protein DnaK K06204 dksA; RNA polymerase-binding transcription factor
C M271_15440 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C M271_10235 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
C M271_21715 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D M271_19740 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D M271_10140 rRNA cytosine-C5-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D M271_15915 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D M271_32455 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D M271_25165 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D M271_35905 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D M271_19760 tetrapyrrole (corrin/porphyrin) methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D M271_37415 cytochrome C peroxidase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D M271_42525 methyltransferase type 11 K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D M271_27545 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D M271_15660 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D M271_37415 cytochrome C peroxidase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D M271_37495 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D M271_35995 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D M271_13995 rRNA adenine methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
B ribosomal protein modification factors
C M271_21170 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C M271_13180 acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C M271_19915 N-acetyltransferase GCN5 K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C M271_43350 hypothetical protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C M271_05805 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
C M271_45750 N-acetyltransferase GCN5 K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C M271_15755 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C M271_15175 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
B rRNA processing factors
C M271_15890 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C M271_10280 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C M271_32500 GTPase Era K03595 era; GTPase
C M271_13805 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C M271_17850 GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C M271_37520 engA; GTP-binding protein Der K03977 engA; GTPase
C M271_32250 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
C M271_14990 ATP-binding protein K03665 hflX; GTPase
B Other maturation factors
C M271_17125 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C M271_10350 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C M271_15000 kinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C M271_15420 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C M271_15445 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
C M271_32315 ribosome-associated protein IOJAP K09710 ybeB; ribosome-associated protein
C M271_32485 heat-shock protein K07042 ybeY; probable rRNA maturation factor
C M271_18670 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C M271_15900 metal-binding protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025