+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Streptomyces rochei

% ! AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors D Cap binding complex C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) D Pre-mRNA cleavage factor IIm (CFIIm) D Cleavage and polyadenylation specificity factor (CPSF) complex D Cleavage stimulation factor (CSTF) complex D U7-dependent histone pre-mRNA processing factors D DRB sensitivity inducing factor (DSIF) complex D N6-methyltransferase complex D Poly(A) addition factors D Negative regulators of mRNA 3' end processing C Other processing factors B mRNA surveillance and transport factors C Transport factors D EJC complex D TREX complex D TREX-2 complex D Nuclear pore complex D Ran-mediated transport factors E SRO_1934 ATPase AAA K13525 VCP; transitional endoplasmic reticulum ATPase E SRO_2815 AAA family ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D eIF4F and regulatory proteins D APOBEC1-ACF complex D Other transport factors C Surveillance factors D Surveillance complex D Protein phosphatase 2A D Other surveillance factors C Factors involved in mRNA localization D Cargo complex D Factors that have mRNA localization signals D Trans-acting binding proteins D Other mRNA localization factors C mRNA cycle factors D Common to processing body (P body) and stress granule D P-body specific factors D Stress granule specific factors B mRNA degradation factors C 5'-3' decay D Decapping complex D Lsm complex D 5' exonucleases D Other 5'-3' decay factors C 3'-5' decay D Core exosome factors D Exosome cofactors D TRAMP complex D Ski complex D Ccr4-NOT complex D Pan complex D Other 3'-5' decay factors C Other degradation factors D RNases # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E SRO_4862 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] E SRO_2245 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] E SRO_2104 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] E SRO_6372 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] E SRO_1536 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] E SRO_6009 hypothetical protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] E SRO_4680 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases E SRO_2016 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] E SRO_3133 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Other RNA degradosome components E SRO_4381 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E SRO_2112 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E SRO_2480 transcription termination factor Rho K03628 rho; transcription termination factor Rho E SRO_6570 transcription termination factor Rho K03628 rho; transcription termination factor Rho C Other RNA degradation factors D Chaperones E SRO_3497 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E SRO_6302 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E SRO_6621 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK E SRO_2988 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] E SRO_4073 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others E SRO_3948 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] E SRO_5530 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ E SRO_5837 RNA helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] E SRO_3884 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] E SRO_5479 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome D Cofactors D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024