+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Streptosporangium roseum

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D Sros_7995 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases D Sros_2984 Serine/threonine protein kinase involved in cell cycle control-like protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D Sros_7676 putative oligoribonuclease; K01175 K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C Sros_2303 GTP-binding protein Era K03595 era; GTPase C Sros_7269 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C Sros_6415 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor C Sros_6416 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor C Sros_8326 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor C Sros_2115 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C Sros_2854 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C Sros_1068 Transcription antiterminator-like protein K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D Sros_8618 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Sros_2826 Fmu, rRNA SAM-dependent methyltransferase:Nop2p K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Sros_5504 16S rRNA m(2)G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Sros_7999 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Sros_2291 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Sros_9385 S-adenosylmethionine-dependent methyltransferase involved in cell division-like protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Sros_2862 S-adenosylmethionine-dependentmethyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Sros_8626 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Sros_6058 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D Sros_0404 rRNA (guanine-N(1)-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Sros_0971 rRNA methylase-like protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Sros_3489 rRNA (guanine-N(2)-)-methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D Sros_1869 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Sros_6058 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Sros_2996 pseudouridine synthase, Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Sros_2883 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Sros_4551 rRNA (adenine-N(6)-)-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] D Sros_9079 rRNA methylase protein K21514 aviRb; 23S rRNA (uridine2479-2'-O)-methyltransferase [EC:2.1.1.208] D Sros_4106 hypothetical protein K21515 aviRa; 23S rRNA (guanine2535-N1)-methyltransferase [EC:2.1.1.209] B ribosomal protein modification factors C Sros_1147 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C Sros_5433 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C Sros_8645 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C Sros_7751 Acetyltransferase including N-acetylase of ribosomal protein-like protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C Sros_1829 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C Sros_2173 RNA modification enzyme, MiaB-family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C Sros_5193 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C Sros_6320 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor B rRNA processing factors C Sros_7995 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Sros_7272 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C Sros_6093 endonuclease involved in recombination-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C Sros_0368 ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C Sros_2303 GTP-binding protein Era K03595 era; GTPase C Sros_6690 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C Sros_8124 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C Sros_8329 GTPase-like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C Sros_3000 GTP-binding protein K03977 engA; GTPase C Sros_7269 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] C Sros_2263 GTP-binding family protein; K03665 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C Sros_1658 Sua5_yciO_yrdC, YrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Sros_6106 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C Sros_2118 Ribosome-binding factor A-like protein K02834 rbfA; ribosome-binding factor A C Sros_2114 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C Sros_6671 conserved hypothetical protein K14761 rlbA; ribosome-associated protein C Sros_7260 conserved hypothetical protein K09710 ybeB; ribosome-associated protein C Sros_2296 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor C Sros_8476 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C Sros_7997 metal-binding possibly nucleic acid-binding protein-like protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025