+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptococcus sanguinis
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D SSA_1561 rncS; Ribonuclease III, putative K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C SSA_1611 era; Era-like GTP-binding protein, putative K03595 era; GTPase
C SSA_0807 obg; GTP-binding protein, putative K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C SSA_1900 nusA; N utilization substance protein A, putative K02600 nusA; transcription termination/antitermination protein NusA
C SSA_0452 nusB; Nitrogen utilization substance protein B, putative K03625 nusB; transcription antitermination protein NusB
C SSA_2205 nusG; Transcription antitermination factor NusG, putative K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D SSA_0649 Ribosomal small subunit pseudouridine synthase A, putative K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SSA_2059 16S rRNA uridine-516 pseudouridylate synthase, putative K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SSA_2123 ksgA; Dimethyladenosine transferase, putative K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SSA_1847 sunL; RRNA methyltransferase RsmB, putative K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SSA_1034 Conserved uncharacterized protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SSA_0624 Conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SSA_0242 Conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SSA_0605 gidB; Methyltransferase gidB, putative K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SSA_1873 mraW; S-adenosyl-methyltransferase mraW, putative K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SSA_1719 Conserved uncharacterized protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SSA_0677 hlyA; rRNA methylase, putative K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D SSA_0173 rrmA; 23S rRNA m1G745 methyltransferase, putative K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SSA_2037 trmH; tRNA (Guanosine-2'-O-)-methyltransferase, TrmH family, putative K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SSA_2380 Conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SSA_1471 Conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SSA_0628 Fe-S-cluster redox enzyme/radical SAM enzyme, Cfr family, putative K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SSA_0677 hlyA; rRNA methylase, putative K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SSA_1459 RNA methyltransferase, putative K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SSA_1777 rluB; Ribosomal large subunit pseudouridine synthase B, putative K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SSA_1070 Ribosomal large subunit pseudouridine synthase D, putative K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SSA_1208 23S rRNA pseudouridine synthase, putative K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SSA_2210 Ribosomal large subunit pseudouridine synthase D, putative K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C SSA_0317 rimI; Ribosomal protein alanine acetyl transferase, putative K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C SSA_1652 Acetyltransferases, putative K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C SSA_1303 rimM; RimM protein, required for 16S rRNA processing, putative K02860 rimM; 16S rRNA processing protein RimM
C SSA_0241 prmA; Ribosomal protein L11 methyltransferase, putative K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C SSA_1561 rncS; Ribonuclease III, putative K03685 rnc; ribonuclease III [EC:3.1.26.3]
C SSA_2240 Holliday junction resolvase, putative K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C SSA_2042 Conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C SSA_0706 rheA; RNA helicase, putative K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C SSA_1869 rheB; ATP-dependent RNA helicase, putative K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C SSA_1611 era; Era-like GTP-binding protein, putative K03595 era; GTPase
C SSA_2120 GTPase, putative K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C SSA_1803 GTP-binding protein, putative K03977 engA; GTPase
C SSA_0807 obg; GTP-binding protein, putative K03979 obgE; GTPase [EC:3.6.5.-]
C SSA_1189 GTP-binding protein, putative K14540 rbgA; ribosome biogenesis GTPase A
C SSA_1432 hflX; HflX GTPase, putative K03665 hflX; GTPase
C SSA_0576 Conserved GTPase, putative K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C SSA_1154 Conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C SSA_0250 relA; GTP pyrophosphokinase, putative K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C SSA_1895 rbfA; Ribosome-binding factor A, putative K02834 rbfA; ribosome-binding factor A
C SSA_1901 Conserved uncharacterized protein K09748 rimP; ribosome maturation factor RimP
C SSA_2372 Conserved hypothetical protein K14761 rlbA; ribosome-associated protein
C SSA_0581 Conserved uncharacterized protein K09710 ybeB; ribosome-associated protein
C SSA_1613 Conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C SSA_0577 Ancient RNA-binding IF3-C fold (CRS1/YhbY domain), putative K07574 yhbY; RNA-binding protein
C SSA_1834 raiA; 30S ribosomal interface protein S30EA, putative K05808 hpf; ribosome hibernation promoting factor
C SSA_0005 GTP-binding protein, putative K06942 ychF; ribosome-binding ATPase
C SSA_0616 YlbN-like protein, putative K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024