+F Repair protein KO
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DNA Repair and Recombination Proteins - Streptococcus sanguinis
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D SSA_1583 ogt; 6-O-methylguanine-DNA methyltransferase, putative K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E SSA_1237 ung; Uracil-DNA glycosylase, putative K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E SSA_2325 3-methyladenine DNA glycosylase, putative K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E SSA_1206 mutY; A/G-specific adenine glycosylase, putative K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E SSA_1711 nth; Endonuclease III, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D Long Patch-BER factors
E DNA polymerase delta complex
E DNA polymerase epsilon complex
D Short Patch-BER factors
D Other BER factors
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
E Cul4-DDB2 complex
E NER4 complex
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
E Cul4-CSA complex
E Other TCR factor
D TFIIH complex
D RPA (replication factor A)
D Other NER factors
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D MutL homologs
D DNA polymerase delta complex
D RPA (replication factor A)
D RFC (replication factor C)
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
D BRCA complex
D RecA family proteins
D Rad52 family proteins
D Rad54 family proteins
D RecQ family DNA helicases
D Bloom's syndrome complex (BTR)
D RPA (replication factor A)
D Protein phosphatase 4
D AP-5 complex
D SMC5-SMC6 complex
D Other HR factors
C NHEJ (non-homologous end-joining)
D DNA-PK complex
D MRX complex
D DNA Ligase 4 complex
D X-family DNA polymerases
D Other NHEJ factors
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C B-family DNA polymerases
C A-family DNA polymerase
C Rad6 epistasis group
C Other TLS factors
B Check point factors
C Rad9-Hus1-Rad1 complex
C HRAD17(Rad24)-RFC complex
C Rad17-Mec3-Ddc1 complex
C FPC (fork protection complex)
C Triple T complex
C BAG6-UBL4A-GET4 complex
C Other check point factors
B Other factors with a suspected DNA repair function
C DNA polymerases
C Nucleases
C Helicases
C PSO4 complex
C Modulation of nucleotide pools
D SSA_2161 NTP pyrophosphohydrolases including oxidative damage repair enzymes, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_1350 Conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_1236 mutX; Mutator protein, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_0665 NTP pyrophosphohydrolases including oxidative damage repair enzymes (MutT/NUDIX family) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_0239 7,8-dihydro-8-oxoguanine-triphosphatase, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_1414 Conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_2193 ADP-ribose pyrophosphatase, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_2160 dut; Deoxyuridinetriphosphatase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
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AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D SSA_1583 ogt; 6-O-methylguanine-DNA methyltransferase, putative K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
C BER (base exicision repair)
D DNA glycosylases
E SSA_1237 ung; Uracil-DNA glycosylase, putative K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E SSA_2325 3-methyladenine DNA glycosylase, putative K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E SSA_1206 mutY; A/G-specific adenine glycosylase, putative K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E SSA_2133 3-methyladenine DNA glycosylase, putative K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E SSA_2253 tag; 3-Methyladenine DNA glycosylase I, constitutive, putative K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E SSA_1607 mutM; Formamidopyrimidine-DNA glycosylase, putative K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E SSA_1711 nth; Endonuclease III, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E SSA_1706 exoA; Exodeoxyribonuclease, putative K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
E SSA_1423 recJ; Single-stranded DNA-specific exonuclease, 5'-3', putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DNA ligase
E SSA_1484 ligA; DNA ligase, putative K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DNA polymerase I
E SSA_0100 polA; DNA polymerase I - 3'-5' exonuclease and polymerase domains, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E SSA_0448 uvrA; Excinuclease ATPase subunit A, putative K03701 uvrA; excinuclease ABC subunit A
E SSA_1356 uvrB; Helicase subunit of the DNA excision repair complex, subunit B, putative K03702 uvrB; excinuclease ABC subunit B
E SSA_1297 uvrC; Nuclease subunit of the excinuclease complex, subunit C, putative K03703 uvrC; excinuclease ABC subunit C
E SSA_0852 pcrA; ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
E SSA_0100 polA; DNA polymerase I - 3'-5' exonuclease and polymerase domains, putative K02335 polA; DNA polymerase I [EC:2.7.7.7]
E SSA_1484 ligA; DNA ligase, putative K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F SSA_0176 rpoB; DNA-directed RNA polymerase I, beta chain (140 kDa subunit), putative K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F SSA_0177 rpoC; DNA-directed RNA polymerase I, beta chain (160 kDa subunit), putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F SSA_0132 rpoA; DNA-directed RNA polymerase, alpha chain, putative K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F SSA_1996 rpoE; DNA-directed RNA polymerase delta subunit, putative K03048 rpoE; DNA-directed RNA polymerase subunit delta
F SSA_1850 rpoZ; DNA-directed RNA polymerase, subunit K/omega, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
F SSA_0008 trcF; Transcription-repair coupling factor, putative K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E SSA_2260 mutS; DNA mismatch repair protein hexA, putative K03555 mutS; DNA mismatch repair protein MutS
E SSA_0355 mutS2; DNA mismatch repair protein, putative K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
E SSA_2257 mutL; DNA mismatch repair protein, putative K03572 mutL; DNA mismatch repair protein MutL
D Strand discrimination factor
D DNA exonucleases
E SSA_0674 xseA; Exodeoxyribonuclease VII large subunit, putative K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
E SSA_0675 xseB; Exodeoxyribonuclease VII small subunit, putative K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DNA polymerase III holoenzyme
E SSA_0846 dnaE; DNA-polymerase III alpha-chain, putative K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E SSA_2066 polC; DNA polymerase III polC-type, putative K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
E SSA_0002 dnaN; DNA polymerase III, beta chain, putative K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E SSA_0720 holA; Conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E SSA_1721 holB; DNA polymerase III, delta' subunit, putative K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E SSA_0997 dnaX; DNA-directed DNA polymerase III chain, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DNA ligase
E SSA_1484 ligA; DNA ligase, putative K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Other MMR factors
E SSA_0852 pcrA; ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
E SSA_0438 ssb; Single-strand binding protein, putative K03111 ssb; single-strand DNA-binding protein
E SSA_0214 ssb2; Single-strand DNA-binding protein (conjugal DNA-protein transfer system), putative K03111 ssb; single-strand DNA-binding protein
E SSA_1718 dam; Site-specific DNA-methyltransferase, putative K06223 dam; DNA adenine methylase [EC:2.1.1.72]
E SSA_1818 Very short patch repair endonuclease, putative K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E SSA_0350 recD; Helicase, putative K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
E SSA_2245 recA; RecA protein, putative K03553 recA; recombination protein RecA
E SSA_2254 ruvA; Holliday junction DNA helicase ruvA, putative K03550 ruvA; holliday junction DNA helicase RuvA
E SSA_0063 ruvB; Holliday junction DNA helicase ruvB, putative K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
E SSA_1849 priA; Primosomal protein N', putative K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RecFOR pathway proteins
E SSA_2245 recA; RecA protein, putative K03553 recA; recombination protein RecA
E SSA_2157 radA; ATP-dependent serine protease, putative K04485 radA; DNA repair protein RadA/Sms
E SSA_2373 recF; DNA replication and repair protein recF, putative K03629 recF; DNA replication and repair protein RecF
E SSA_0549 recG; ATP-dependent DNA helicase recG, transcription-repair coupling factor, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
E SSA_1423 recJ; Single-stranded DNA-specific exonuclease, 5'-3', putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
E SSA_0025 recO; DNA repair protein recO, putative K03584 recO; DNA repair protein RecO (recombination protein O)
E SSA_0690 recR; Recombinational DNA repair protein (RecF pathway), putative K06187 recR; recombination protein RecR
E SSA_0679 recN; DNA repair and genetic recombination, putative K03631 recN; DNA repair protein RecN (Recombination protein N)
E SSA_1859 recU; Penicillin-binding protein-like factor A/recombinase, putative K03700 recU; recombination protein U
E SSA_2254 ruvA; Holliday junction DNA helicase ruvA, putative K03550 ruvA; holliday junction DNA helicase RuvA
E SSA_0063 ruvB; Holliday junction DNA helicase ruvB, putative K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AddAB pathway proteins
E SSA_1451 rexA; Exonuclease RexA, putative K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
E SSA_1452 rexB; Second subunit of major exonuclease, putative K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Other HR factor
E SSA_1255 Conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F SSA_1220 gyrA; DNA gyrase A subunit, putative K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F SSA_0878 gyrB; DNA gyrase, putative K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
F SSA_1184 topA; DNA topoisomerase I, putative K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
E Supressor
F SSA_0683 DNA-binding protein HU, putative K03530 hupB; DNA-binding protein HU-beta
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
F SSA_1423 recJ; Single-stranded DNA-specific exonuclease, 5'-3', putative K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
F SSA_0025 recO; DNA repair protein recO, putative K03584 recO; DNA repair protein RecO (recombination protein O)
F SSA_0690 recR; Recombinational DNA repair protein (RecF pathway), putative K06187 recR; recombination protein RecR
F SSA_1484 ligA; DNA ligase, putative K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E Facilitator
E Supressor
F SSA_0448 uvrA; Excinuclease ATPase subunit A, putative K03701 uvrA; excinuclease ABC subunit A
F SSA_1356 uvrB; Helicase subunit of the DNA excision repair complex, subunit B, putative K03702 uvrB; excinuclease ABC subunit B
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D SSA_0343 dinP; DNA-damage-inducible protein P, putative K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SSA_0621 SOS responce UmuC protein, putative K03502 umuC; DNA polymerase V
C Other SOS response factors
D SSA_2245 recA; RecA protein, putative K03553 recA; recombination protein RecA
D SSA_0622 Transcriptional regulator (XRE family), SOS-response transcriptional repressors (RecA-mediated autopeptidases), putative K01356 lexA; repressor LexA [EC:3.4.21.88]
D SSA_0679 recN; DNA repair and genetic recombination, putative K03631 recN; DNA repair protein RecN (Recombination protein N)
D SSA_0438 ssb; Single-strand binding protein, putative K03111 ssb; single-strand DNA-binding protein
D SSA_0214 ssb2; Single-strand DNA-binding protein (conjugal DNA-protein transfer system), putative K03111 ssb; single-strand DNA-binding protein
D SSA_1831 recX; Conserved hypothetical protein K03565 recX; regulatory protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
D SSA_0873 dinG; ATP-dependent DNA helicase; DNA polymerase III, epsilon subunit, putative K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
C Modulation of nucleotide pools
D SSA_2161 NTP pyrophosphohydrolases including oxidative damage repair enzymes, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_1350 Conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_1236 mutX; Mutator protein, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_0665 NTP pyrophosphohydrolases including oxidative damage repair enzymes (MutT/NUDIX family) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_0239 7,8-dihydro-8-oxoguanine-triphosphatase, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_1414 Conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_2193 ADP-ribose pyrophosphatase, putative K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SSA_2160 dut; Deoxyuridinetriphosphatase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SSA_0770 nrdE; Ribonucleoside-diphosphate reductase, putative K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SSA_0768 nrdF; Ribonucleoside-diphosphate reductase 2, beta subunit, putative K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C Others
D SSA_1271 Conserved uncharacterized protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024