+E Transcription factors KO
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Transcription Factors - Streptococcus salivarius HSISS4
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
C DeoR family
D HSISS4_01856 fruR2; UDP-N-acetylglucosamine 2-epimerase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D HSISS4_00322 fruR1; Transcriptional repressor of the fructose operon, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D HSISS4_00167 HTH-type transcriptional repressor GlcR K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
C LacI family
D HSISS4_00927 malR; Maltose operon transcriptional repressor MalR, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HSISS4_01243 galR; Galactose operon repressor, GalR-LacI family of transcriptional regulators K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HSISS4_00547 ccpA; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HSISS4_01643 Sucrose operon repressor ScrR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D HSISS4_01787 Trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D HSISS4_01050 Transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
D HSISS4_00053 Transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D HSISS4_01299 Transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D HSISS4_01020 Transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D HSISS4_01684 gnlR; Transcriptional regulator, repressor of the glutamine synthetase, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
C Fur family
D HSISS4_00678 fur; Peroxide stress regulator PerR, FUR family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
C IclR family
C CRP/FNR family
D HSISS4_00119 putative N-ribosylNicotinamide CRP-like regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
C Rrf2 family
C ArsR family
D HSISS4_00579 Cadmium efflux system accessory protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D HSISS4_01263 Transcriptional regulator, ArsR family K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
C XRE family
C PadR family
D HSISS4_01867 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
C Other families
D HSISS4_00666 Mn-dependent transcriptional regulator MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D HSISS4_00811 birA; Biotin operon repressor / Biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HSISS4_00343 nadR; Nicotinamide-nucleotide adenylyltransferase, NadR family/Ribosylnicotinamide kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D HSISS4_00217 comR; Transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D HSISS4_01166 rggD; Rgg transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D HSISS4_01169 rggC; Rgg transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D HSISS4_00145 rggH; Positive transcriptional regulator, MutR family K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HSISS4_01476 rggG; Positive transcriptional regulator, MutR family K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D HSISS4_01692 purR; PurR: transcription regulator associated with purine metabolism K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D HSISS4_01375 Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) K01926 rex; redox-sensing transcriptional repressor
D HSISS4_01548 codY; GTP-sensing transcriptional pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor
D HSISS4_01627 Transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator
D HSISS4_00075 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D HSISS4_00086 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D HSISS4_01758 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D HSISS4_01148 Transcriptional regulator, PBSX family K07729 K07729; putative transcriptional regulator
D HSISS4_01220 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D HSISS4_00534 Transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
C Others
D HSISS4_01903 spoJ; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HSISS4_00775 Arginine repressor ArgR, putative K03402 argR; transcriptional regulator of arginine metabolism
D HSISS4_00037 argR; Arginine repressor ArgR, putative K03402 argR; transcriptional regulator of arginine metabolism
D HSISS4_00095 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D HSISS4_00060 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D HSISS4_00492 phage shock protein C, PspC K03973 pspC; phage shock protein C
D HSISS4_00440 pyrR; Uracil phosphoribosyltransferase/Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HSISS4_00248 nrdR; Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HSISS4_00102 comX; Competence-specific sigma factor ComX K12296 comX1_2; competence protein ComX
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0