+D GENES KO #

  KEGG Orthology (KO) - Swingsia samuiensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ssam00010] D E3D00_10240 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3D00_06835 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D E3D00_02585 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_02270 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3D00_02265 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E3D00_06870 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3D00_09755 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3D00_09625 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3D00_09810 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3D00_09815 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3D00_09820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_04575 alpha-keto acid decarboxylase family protein K01568 PDC; pyruvate decarboxylase [EC:4.1.1.1] D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D E3D00_03950 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D E3D00_03365 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D E3D00_02245 PQQ-dependent dehydrogenase, methanol/ethanol family K22473 adhA; alcohol dehydrogenase (quinone), dehydrogenase subunit [EC:1.1.5.5] D E3D00_02240 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D E3D00_03725 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D E3D00_08280 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D E3D00_05570 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:ssam00020] D E3D00_08910 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D E3D00_03180 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D E3D00_03175 NAD-dependent isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D E3D00_05070 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D E3D00_04535 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_06540 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D E3D00_09810 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3D00_09815 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3D00_09820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ssam00030] D E3D00_06835 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D E3D00_00750 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D E3D00_06850 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D E3D00_00210 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D E3D00_06840 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D E3D00_05875 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E3D00_06830 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D E3D00_06855 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3D00_04175 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E3D00_07080 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D E3D00_07085 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D E3D00_08980 glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D E3D00_01470 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D E3D00_05155 pyrroloquinoline quinone-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D E3D00_03720 GMC family oxidoreductase K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3] D E3D00_03715 gluconate 2-dehydrogenase subunit 3 family protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3] D E3D00_06860 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_02585 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] C 00040 Pentose and glucuronate interconversions [PATH:ssam00040] D E3D00_01020 polygalacturonase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15] D E3D00_04010 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3D00_00230 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3D00_05875 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D E3D00_10020 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D E3D00_07980 SMP-30/gluconolactonase/LRE family protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110] C 00051 Fructose and mannose metabolism [PATH:ssam00051] D E3D00_01590 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D E3D00_06995 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D E3D00_02710 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D E3D00_02585 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D E3D00_06230 mannitol dehydrogenase family protein K19633 sr; sorbose reductase [EC:1.1.1.289] D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_04380 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] C 00052 Galactose metabolism [PATH:ssam00052] D E3D00_08280 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D E3D00_05570 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D E3D00_04955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3D00_00230 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3D00_10240 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3D00_04960 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] C 00053 Ascorbate and aldarate metabolism [PATH:ssam00053] D E3D00_04010 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3D00_04875 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:ssam00500] D E3D00_00230 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3D00_03470 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3D00_10240 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3D00_06835 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D E3D00_01590 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ssam00520] D E3D00_02750 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D E3D00_03355 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D E3D00_01590 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D E3D00_00035 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E3D00_06770 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D E3D00_00030 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D E3D00_05180 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E3D00_00825 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E3D00_08550 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D E3D00_10240 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3D00_00230 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3D00_04010 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3D00_04955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3D00_04960 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D E3D00_04875 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D E3D00_06835 bifunctional transaldolase/phosoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] D E3D00_02710 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D E3D00_06995 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:ssam00620] D E3D00_09810 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3D00_09815 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3D00_09820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_03950 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D E3D00_03365 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D E3D00_02245 PQQ-dependent dehydrogenase, methanol/ethanol family K22473 adhA; alcohol dehydrogenase (quinone), dehydrogenase subunit [EC:1.1.5.5] D E3D00_02240 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D E3D00_03725 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5] D E3D00_09625 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3D00_07970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E3D00_07065 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E3D00_07070 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E3D00_03860 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E3D00_02455 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D E3D00_05200 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D E3D00_08120 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D E3D00_01570 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D E3D00_04865 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D E3D00_07170 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D E3D00_06540 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D E3D00_00520 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3D00_07690 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ssam00630] D E3D00_08910 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D E3D00_03180 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D E3D00_07175 catalase K03781 katE; catalase [EC:1.11.1.6] D E3D00_02745 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D E3D00_04665 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3D00_09920 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3D00_04650 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D E3D00_04640 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_04645 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D E3D00_07085 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] C 00640 Propanoate metabolism [PATH:ssam00640] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_07970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E3D00_07065 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E3D00_07070 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E3D00_03860 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E3D00_02905 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] C 00650 Butanoate metabolism D E3D00_04610 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_02625 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_04615 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:ssam00660] D E3D00_04610 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_02625 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_04615 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E3D00_00980 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D E3D00_00975 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D E3D00_00970 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:ssam00562] D E3D00_01335 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3D00_09120 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ssam00190] D E3D00_06685 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D E3D00_08305 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D E3D00_08510 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D E3D00_08300 hypothetical protein K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D E3D00_08505 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D E3D00_08500 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D E3D00_08495 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D E3D00_01555 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D E3D00_01560 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D E3D00_03305 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E3D00_03295 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E3D00_03300 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E3D00_03310 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D E3D00_03290 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E3D00_04720 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3D00_04705 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3D00_04710 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3D00_04715 F0F1 ATP synthase subunit C K02128 ATPeF0C; F-type H+-transporting ATPase subunit c D E3D00_05540 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D E3D00_08610 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ssam00680] D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D E3D00_09000 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D E3D00_09920 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3D00_09755 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3D00_00520 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_02585 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D E3D00_06870 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3D00_00325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3D00_06280 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3D00_04600 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:ssam00910] D E3D00_04665 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3D00_08255 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D E3D00_08250 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E3D00_07935 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:ssam00920] D E3D00_03565 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D E3D00_04020 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D E3D00_01640 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D E3D00_04030 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D E3D00_03890 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D E3D00_04090 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D E3D00_00340 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3D00_05575 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E3D00_02675 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D E3D00_03220 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D E3D00_01150 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D E3D00_06670 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ssam00061] D E3D00_07970 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D E3D00_07065 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D E3D00_07070 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D E3D00_03860 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D E3D00_09100 acyl carrier protein K02078 acpP; acyl carrier protein D E3D00_09175 acyl carrier protein K02078 acpP; acyl carrier protein D E3D00_09090 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E3D00_00570 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D E3D00_09105 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E3D00_09095 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3D00_08105 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E3D00_08860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D E3D00_00195 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D E3D00_03950 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ssam00561] D E3D00_03365 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D E3D00_00575 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D E3D00_03510 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E3D00_01545 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:ssam00564] D E3D00_08365 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D E3D00_03510 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E3D00_01545 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D E3D00_08295 methyltransferase domain-containing protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71] D E3D00_08620 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D E3D00_08075 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D E3D00_01585 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E3D00_01580 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D E3D00_00355 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D E3D00_03255 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D E3D00_09730 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:ssam00600] D E3D00_02980 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D E3D00_02750 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ssam00230] D E3D00_05230 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3D00_04175 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D E3D00_06525 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E3D00_07665 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D E3D00_08595 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D E3D00_09885 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D E3D00_09870 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D E3D00_09880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D E3D00_08600 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D E3D00_10110 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D E3D00_10115 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D E3D00_09865 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D E3D00_09860 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D E3D00_07095 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E3D00_05255 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D E3D00_04815 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D E3D00_09690 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D E3D00_08570 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D E3D00_03420 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D E3D00_00890 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D E3D00_08670 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D E3D00_04275 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D E3D00_08875 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3D00_04730 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3D00_08880 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D E3D00_07780 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D E3D00_08035 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D E3D00_09680 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D E3D00_08615 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D E3D00_09015 GAF domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D E3D00_06290 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D E3D00_01275 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D E3D00_01900 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D E3D00_06265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E3D00_04020 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] C 00240 Pyrimidine metabolism [PATH:ssam00240] D E3D00_01735 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E3D00_01730 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E3D00_03500 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E3D00_03505 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D E3D00_08750 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D E3D00_06880 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D E3D00_08900 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D E3D00_09555 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D E3D00_08060 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D E3D00_08570 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D E3D00_06265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E3D00_04295 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D E3D00_04420 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D E3D00_09770 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D E3D00_02825 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D E3D00_01760 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D E3D00_01275 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D E3D00_05175 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D E3D00_08875 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3D00_04730 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3D00_08880 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D E3D00_00100 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D E3D00_10285 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D E3D00_01430 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D E3D00_06070 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D E3D00_06325 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D E3D00_05460 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ssam00250] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_09500 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D E3D00_08745 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3D00_01420 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E3D00_08705 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E3D00_06290 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D E3D00_09860 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D E3D00_03500 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D E3D00_08255 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D E3D00_08250 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D E3D00_05300 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3D00_09285 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3D00_04665 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3D00_01735 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D E3D00_01730 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D E3D00_09190 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D E3D00_09880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D E3D00_00035 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E3D00_06525 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:ssam00260] D E3D00_00200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3D00_05085 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3D00_02580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E3D00_00910 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D E3D00_08325 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D E3D00_05400 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D E3D00_09920 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3D00_06870 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3D00_00325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3D00_06280 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3D00_04600 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D E3D00_06325 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D E3D00_06500 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D E3D00_04650 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D E3D00_04640 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_04645 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D E3D00_01585 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D E3D00_01750 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E3D00_03870 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D E3D00_03875 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ssam00270] D E3D00_05575 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D E3D00_02675 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D E3D00_03220 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D E3D00_00335 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D E3D00_09215 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E3D00_05125 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E3D00_04625 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D E3D00_04630 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D E3D00_07920 mtnK; S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D E3D00_08430 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D E3D00_04815 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D E3D00_02655 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D E3D00_03635 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D E3D00_03625 mtnC; acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D E3D00_03630 cupin domain-containing protein K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D E3D00_05210 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D E3D00_07535 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3D00_04565 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D E3D00_00200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3D00_05085 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3D00_02580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E3D00_01150 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D E3D00_06670 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D E3D00_06990 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_05060 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_08805 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D E3D00_08290 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00340 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3D00_00325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3D00_06280 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:ssam00280] D E3D00_06990 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_05060 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_02905 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ssam00290] D E3D00_01750 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D E3D00_00980 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D E3D00_00975 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D E3D00_00970 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D E3D00_04610 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_02625 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_04615 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E3D00_04620 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D E3D00_10265 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D E3D00_06990 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_05060 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_07690 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:ssam00300] D E3D00_02580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D E3D00_00200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3D00_05085 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3D00_00305 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D E3D00_05130 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D E3D00_08160 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D E3D00_03690 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E3D00_04670 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D E3D00_08165 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D E3D00_06305 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D E3D00_08640 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D E3D00_00790 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E3D00_00795 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ssam00310] D E3D00_04535 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_01325 lysine-2,3-aminomutase-like protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:ssam00220] D E3D00_03695 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D E3D00_01420 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E3D00_08705 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E3D00_09190 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D E3D00_09880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D E3D00_04665 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_06690 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D E3D00_08155 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D E3D00_06270 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D E3D00_03690 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E3D00_09930 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:ssam00330] D E3D00_03980 creatininase family protein K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D E3D00_07045 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D E3D00_04630 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D E3D00_04625 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D E3D00_04795 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D E3D00_05300 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3D00_09285 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3D00_00735 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D E3D00_04835 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:ssam00340] D E3D00_04280 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D E3D00_06285 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D E3D00_09990 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D E3D00_06515 hypothetical protein K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D E3D00_09005 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D E3D00_09975 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D E3D00_09985 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D E3D00_09965 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D E3D00_06815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3D00_00320 histidinol phosphate phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D E3D00_04285 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:ssam00350] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_06815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D E3D00_03950 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:ssam00360] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_06815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3D00_03065 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D E3D00_02695 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D E3D00_03930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00380 Tryptophan metabolism [PATH:ssam00380] D E3D00_04535 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_07175 catalase K03781 katE; catalase [EC:1.11.1.6] D E3D00_02695 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ssam00400] D E3D00_07860 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D E3D00_07955 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4] D E3D00_07060 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D E3D00_08720 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D E3D00_02830 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D E3D00_08865 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D E3D00_09790 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E3D00_09795 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D E3D00_09800 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D E3D00_09550 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D E3D00_09805 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D E3D00_03870 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D E3D00_03875 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D E3D00_08915 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D E3D00_09630 prephenate dehydrogenase/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D E3D00_00310 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_06815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:ssam00410] D E3D00_06895 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D E3D00_02905 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] C 00430 Taurine and hypotaurine metabolism [PATH:ssam00430] D E3D00_02505 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_02870 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_03565 tauD; taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] C 00440 Phosphonate and phosphinate metabolism D E3D00_00080 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ssam00450] D E3D00_00335 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D E3D00_09215 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E3D00_00490 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D E3D00_03060 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D E3D00_00650 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D E3D00_04020 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D E3D00_00090 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:ssam00460] D E3D00_03470 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D E3D00_02505 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_02870 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_09920 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ssam00470] D E3D00_03905 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E3D00_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3D00_09190 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D E3D00_09880 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D E3D00_08895 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D E3D00_00805 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E3D00_06305 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D E3D00_08640 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D E3D00_03065 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:ssam00480] D E3D00_02505 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_02870 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_08805 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D E3D00_08290 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D E3D00_01635 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D E3D00_08530 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D E3D00_05925 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D E3D00_02100 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D E3D00_02260 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D E3D00_03455 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D E3D00_07835 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D E3D00_06840 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D E3D00_00750 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D E3D00_08360 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D E3D00_07045 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D E3D00_04630 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:ssam00511] D E3D00_02750 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00540 Lipopolysaccharide biosynthesis [PATH:ssam00540] D E3D00_08110 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3D00_00850 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D E3D00_08100 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D E3D00_08115 LpxI family protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D E3D00_01445 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D E3D00_08835 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D E3D00_08225 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D E3D00_09765 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D E3D00_00315 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D E3D00_08840 DUF374 domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D E3D00_08830 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D E3D00_00290 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D E3D00_01480 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D E3D00_01485 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D E3D00_04805 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ssam00541] D E3D00_00230 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D E3D00_04955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D E3D00_04960 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D E3D00_04010 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D E3D00_04875 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D E3D00_04470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3D00_04475 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E3D00_04465 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E3D00_04460 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D E3D00_06995 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D E3D00_02710 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D E3D00_00030 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D E3D00_08550 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:ssam00550] D E3D00_05180 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E3D00_00825 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E3D00_00820 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D E3D00_00805 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E3D00_00790 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E3D00_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3D00_00795 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D E3D00_08070 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E3D00_00135 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3D00_00800 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E3D00_00815 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E3D00_03410 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3D00_04975 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D E3D00_07725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E3D00_00785 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D E3D00_00105 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:ssam00552] D E3D00_00135 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:ssam00543] D E3D00_05575 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ssam00730] D E3D00_06510 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D E3D00_06775 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D E3D00_05905 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_05910 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_00050 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D E3D00_01400 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D E3D00_00060 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D E3D00_00065 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D E3D00_01305 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D E3D00_10225 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D E3D00_01900 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ssam00740] D E3D00_04240 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D E3D00_04230 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D E3D00_04245 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D E3D00_04235 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D E3D00_03620 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D E3D00_06455 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D E3D00_09320 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D E3D00_05230 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:ssam00750] D E3D00_08855 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D E3D00_06280 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3D00_09585 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D E3D00_09590 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D E3D00_08325 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:ssam00760] D E3D00_09500 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D E3D00_09495 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D E3D00_09505 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D E3D00_07865 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D E3D00_04840 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D E3D00_06265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E3D00_04760 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D E3D00_09845 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D E3D00_00875 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D E3D00_07150 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:ssam00770] D E3D00_04610 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_02625 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D E3D00_04615 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D E3D00_04620 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D E3D00_10265 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D E3D00_06900 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D E3D00_06895 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D E3D00_00415 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D E3D00_10290 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D E3D00_06265 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D E3D00_04995 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D E3D00_08725 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D E3D00_08040 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D E3D00_06990 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_05060 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:ssam00780] D E3D00_05680 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D E3D00_09105 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E3D00_09095 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3D00_08105 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E3D00_08860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D E3D00_05685 biotin synthase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D E3D00_09170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D E3D00_05690 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D E3D00_05695 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D E3D00_05675 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D E3D00_09040 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D E3D00_00420 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ssam00785] D E3D00_00240 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D E3D00_09830 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_09810 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D E3D00_09815 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D E3D00_09820 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D E3D00_05070 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D E3D00_04535 sucB; dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D E3D00_04650 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D E3D00_04640 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3D00_04645 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ssam00790] D E3D00_02460 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D E3D00_02490 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3] D E3D00_02495 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D E3D00_03855 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D E3D00_04240 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D E3D00_05065 anthranilate synthase component I family protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D E3D00_02465 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D E3D00_02475 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D E3D00_02470 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D E3D00_03090 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D E3D00_07015 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D E3D00_07020 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D E3D00_07035 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D E3D00_07010 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D E3D00_07000 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D E3D00_07025 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:ssam00670] D E3D00_05405 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D E3D00_09920 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D E3D00_08595 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D E3D00_07095 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E3D00_08180 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E3D00_04640 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D E3D00_09215 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D E3D00_06070 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D E3D00_01280 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ssam00860] D E3D00_06500 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D E3D00_03495 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_07880 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_09910 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D E3D00_08380 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D E3D00_08385 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D E3D00_04415 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D E3D00_08425 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D E3D00_04405 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D E3D00_05095 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D E3D00_09185 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D E3D00_08305 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D E3D00_09375 precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D E3D00_09365 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D E3D00_09380 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D E3D00_09400 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D E3D00_09395 cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D E3D00_09385 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D E3D00_09405 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D E3D00_09390 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D E3D00_09370 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D E3D00_09410 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D E3D00_09360 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D E3D00_00260 cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D E3D00_00265 cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D E3D00_09415 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D E3D00_09420 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D E3D00_09425 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D E3D00_09430 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D E3D00_09345 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D E3D00_09335 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D E3D00_09340 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D E3D00_09315 phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D E3D00_04480 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D E3D00_03915 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ssam00130] D E3D00_08795 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D E3D00_00205 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D E3D00_05580 ubiquinone biosynthesis protein UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D E3D00_10295 class I SAM-dependent methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D E3D00_01210 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ssam00900] D E3D00_01400 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D E3D00_08080 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D E3D00_06660 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D E3D00_02440 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D E3D00_00185 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D E3D00_00915 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D E3D00_01395 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D E3D00_08890 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D E3D00_08070 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:ssam00909] D E3D00_09665 shc; squalene--hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D E3D00_06830 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:ssam00523] D E3D00_04470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3D00_04475 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E3D00_04465 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E3D00_04460 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D E3D00_04475 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:ssam00946] D E3D00_03470 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:ssam00332] D E3D00_00735 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D E3D00_04835 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:ssam00261] D E3D00_04020 cysC; adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D E3D00_00200 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D E3D00_05085 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D E3D00_00305 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D E3D00_05130 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:ssam00521] D E3D00_10240 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D E3D00_05395 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D E3D00_01335 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3D00_09120 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D E3D00_04470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3D00_04475 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D E3D00_04465 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D E3D00_04460 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D E3D00_10240 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:ssam00525] D E3D00_04470 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D E3D00_04475 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:ssam00401] D E3D00_09630 prephenate dehydrogenase/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_06815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis [PATH:ssam00405] D E3D00_06250 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D E3D00_09790 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E3D00_09795 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D E3D00_09090 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E3D00_09095 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3D00_08860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D E3D00_09100 acyl carrier protein K02078 acpP; acyl carrier protein D E3D00_09175 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:ssam00999] D E3D00_05125 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D E3D00_08720 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D E3D00_03470 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D E3D00_03930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation [PATH:ssam00364] D E3D00_08435 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D E3D00_05185 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:ssam00625] D E3D00_03950 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ssam00361] D E3D00_08435 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D E3D00_05185 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:ssam00623] D E3D00_08435 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D E3D00_05185 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation D E3D00_03930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00633 Nitrotoluene degradation [PATH:ssam00633] D E3D00_08240 nfsB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D E3D00_07200 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D E3D00_03930 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] C 00626 Naphthalene degradation [PATH:ssam00626] D E3D00_03950 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D E3D00_08995 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ssam03020] D E3D00_02035 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E3D00_02030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E3D00_01885 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E3D00_08030 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ssam03010] D E3D00_02820 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D E3D00_00385 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D E3D00_01975 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D E3D00_07910 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D E3D00_01920 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D E3D00_01700 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D E3D00_02020 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D E3D00_01935 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D E3D00_06985 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D E3D00_02010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D E3D00_01890 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D E3D00_02025 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D E3D00_01895 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D E3D00_01940 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D E3D00_02350 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D E3D00_01000 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D E3D00_01960 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D E3D00_01695 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D E3D00_01985 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D E3D00_10305 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D E3D00_00615 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D E3D00_02050 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D E3D00_01990 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D E3D00_02005 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D E3D00_02000 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D E3D00_01945 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D E3D00_01930 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D E3D00_02040 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D E3D00_01690 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D E3D00_02045 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D E3D00_02055 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D E3D00_06980 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D E3D00_01955 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D E3D00_01910 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D E3D00_01970 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D E3D00_01880 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D E3D00_01925 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D E3D00_00985 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D E3D00_01460 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D E3D00_00720 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D E3D00_01980 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D E3D00_01995 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D E3D00_01950 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D E3D00_04820 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D E3D00_00725 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D E3D00_00535 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D E3D00_01965 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D E3D00_01915 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D E3D00_10135 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D E3D00_00580 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D E3D00_09745 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D E3D00_08130 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D E3D00_01465 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D E3D00_05630 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D E3D00_01200 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D E3D00_01185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ssam00970] D E3D00_04425 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_01190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_01260 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_03275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_04890 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_06355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_09235 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_00880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_07640 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_08655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_08660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_00900 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E3D00_02450 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E3D00_10245 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E3D00_04785 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3D00_09685 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3D00_10000 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3D00_02595 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3D00_05525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3D00_03315 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3D00_05530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3D00_06960 tRNA-His K14226 tRNA-His; tRNA His D E3D00_01195 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_01265 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_03280 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_04885 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_06350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_09230 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_00235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_00455 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_02785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_05945 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_06275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_08235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_04980 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3D00_04485 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3D00_00150 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_01175 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_01245 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_04905 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_05545 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_09250 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_04310 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D E3D00_00555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3D00_00885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3D00_01015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_02195 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_09545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_00715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_06210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3D00_02940 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3D00_03350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3D00_03320 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D E3D00_02230 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E3D00_00425 tRNA-Val K14237 tRNA-Val; tRNA Val D E3D00_10010 tRNA-Val K14237 tRNA-Val; tRNA Val D E3D00_03495 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_07880 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_02205 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D E3D00_02200 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D E3D00_02210 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D E3D00_07940 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E3D00_07760 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3D00_07745 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D E3D00_07740 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D E3D00_05310 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E3D00_07815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E3D00_07895 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E3D00_00090 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E3D00_08180 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D E3D00_10260 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E3D00_02140 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3D00_03605 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E3D00_08465 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D E3D00_07785 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3D00_00405 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E3D00_00180 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E3D00_01455 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E3D00_01450 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E3D00_05895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3D00_01440 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ssam03060] D E3D00_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3D00_03325 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3D00_09775 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3D00_10155 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E3D00_10150 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3D00_07995 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3D00_08145 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3D00_06700 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3D00_08390 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_09570 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_01005 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E3D00_06295 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3D00_03640 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D E3D00_07805 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3D00_07810 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D E3D00_08045 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E3D00_03600 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ssam04122] D E3D00_05905 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_05910 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_00340 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D E3D00_01385 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D E3D00_05920 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E3D00_07035 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D E3D00_07015 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D E3D00_07030 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D E3D00_09610 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D E3D00_07020 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D E3D00_00055 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:ssam03018] D E3D00_01785 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D E3D00_07680 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D E3D00_09755 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3D00_02345 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E3D00_09935 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D E3D00_01140 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D E3D00_06315 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D E3D00_10205 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D E3D00_04520 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D E3D00_00410 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D E3D00_05140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3D00_08450 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3D00_06930 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3D00_08610 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D E3D00_01795 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ssam03030] D E3D00_08730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3D00_00390 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3D00_02860 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3D00_00095 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3D00_02130 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3D00_01630 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3D00_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3D00_03850 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D E3D00_01715 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D E3D00_07560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_03940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_00905 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D E3D00_07650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3D00_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ssam03410] D E3D00_03465 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D E3D00_04585 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D E3D00_10300 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D E3D00_01680 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D E3D00_02430 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E3D00_09715 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E3D00_07770 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E3D00_07650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3D00_02590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3D00_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ssam03420] D E3D00_00280 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D E3D00_03945 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D E3D00_08275 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D E3D00_09725 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D E3D00_10095 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E3D00_07650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3D00_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ssam03430] D E3D00_08350 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3D00_03590 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E3D00_10095 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E3D00_07670 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E3D00_02280 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E3D00_01390 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D E3D00_02590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3D00_07560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_03940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_00390 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3D00_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3D00_02860 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3D00_02130 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3D00_00095 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3D00_08730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3D00_01630 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3D00_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ssam03440] D E3D00_02590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3D00_07560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_03940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D E3D00_00375 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D E3D00_02850 recR; recombination protein RecR K06187 recR; recombination protein RecR D E3D00_02555 recA; recombinase RecA K03553 recA; recombination protein RecA D E3D00_07650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3D00_06715 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D E3D00_06720 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E3D00_06710 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D E3D00_00285 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E3D00_00390 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3D00_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3D00_02860 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3D00_02130 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3D00_00095 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3D00_08730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3D00_01630 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3D00_05615 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ssam02010] D E3D00_09060 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D E3D00_02975 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3D00_05560 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3D00_09030 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3D00_04735 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3D00_00130 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3D00_09020 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3D00_04040 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3D00_09025 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3D00_04045 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3D00_04000 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D E3D00_05750 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D E3D00_05755 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E3D00_05760 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E3D00_04135 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D E3D00_04145 ABC transporter permease K02072 metI; D-methionine transport system permease protein D E3D00_04140 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D E3D00_05055 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D E3D00_06040 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3D00_02480 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3D00_02485 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3D00_06045 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3D00_00400 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D E3D00_00395 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D E3D00_06585 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D E3D00_06590 heme ABC transporter permease K02195 ccmC; heme exporter protein C D E3D00_02415 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D E3D00_02410 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D E3D00_01655 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D E3D00_09150 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D E3D00_01660 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D E3D00_09145 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein D E3D00_08210 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D E3D00_01535 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D E3D00_01530 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D E3D00_01790 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D E3D00_05710 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D E3D00_03435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D E3D00_10195 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D E3D00_10190 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:ssam03070] D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_05715 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D E3D00_05710 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D E3D00_10155 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E3D00_10150 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3D00_03325 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3D00_09775 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3D00_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3D00_07995 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3D00_08145 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3D00_06700 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3D00_06295 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3D00_08390 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_09570 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_01005 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E3D00_03640 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D E3D00_07805 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3D00_07810 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D E3D00_01080 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D E3D00_01085 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D E3D00_01060 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D E3D00_01065 type VI secretion system protein TssL K11892 impK; type VI secretion system protein ImpK D E3D00_01090 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D E3D00_01075 tagH; type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein B B 09132 Signal transduction C 02020 Two-component system [PATH:ssam02020] D E3D00_05775 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E3D00_05770 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D E3D00_04000 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D E3D00_06455 phosphatase PAP2 family protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2] D E3D00_00595 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D E3D00_00600 response regulator transcription factor K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D E3D00_05275 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_05390 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_06220 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_01850 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D E3D00_01855 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump D E3D00_01860 nodulation protein K07789 mdtC; multidrug efflux pump D E3D00_04110 nodulation protein K07789 mdtC; multidrug efflux pump D E3D00_05420 flagellin B K02406 fliC; flagellin D E3D00_00625 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D E3D00_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E3D00_08470 lysylphosphatidylglycerol synthetase family protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D E3D00_05335 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D E3D00_05330 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D E3D00_07170 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D E3D00_08345 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D E3D00_04665 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3D00_06920 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D E3D00_06925 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D E3D00_05785 chemotaxis protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3D00_01050 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D E3D00_06780 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA D E3D00_09190 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D E3D00_01555 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D E3D00_01560 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_05050 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D E3D00_07155 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D E3D00_07045 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ssam02024] D E3D00_06930 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3D00_09790 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D E3D00_09795 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D E3D00_07860 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D E3D00_06250 PhzF family phenazine biosynthesis protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] D E3D00_05965 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D E3D00_05970 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D E3D00_05345 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D E3D00_04230 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D E3D00_05840 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3D00_07660 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3D00_03205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3D00_03210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3D00_03200 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D E3D00_08145 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3D00_03325 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3D00_09775 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3D00_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3D00_07995 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3D00_06700 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3D00_06295 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3D00_08390 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_09570 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_01005 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:ssam02030] D E3D00_05785 chemotaxis protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3D00_07120 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D E3D00_05810 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D E3D00_07130 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3D00_00625 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D E3D00_01350 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D E3D00_00630 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:ssam02040] D E3D00_02530 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D E3D00_07115 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D E3D00_07120 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D E3D00_06785 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D E3D00_06790 hypothetical protein K02413 fliJ; flagellar protein FliJ D E3D00_05805 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D E3D00_05810 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D E3D00_07130 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3D00_02515 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D E3D00_02510 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D E3D00_02535 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D E3D00_02540 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR D E3D00_07135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D E3D00_02545 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D E3D00_04115 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D E3D00_02520 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D E3D00_02525 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D E3D00_07110 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D E3D00_04355 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D E3D00_04125 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D E3D00_04120 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D E3D00_03375 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D E3D00_02950 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D E3D00_02955 chemotaxis protein chel K02395 flgJ; peptidoglycan hydrolase FlgJ D E3D00_04360 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D E3D00_04365 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D E3D00_05420 flagellin B K02406 fliC; flagellin D E3D00_00625 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D E3D00_01350 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D E3D00_00630 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D E3D00_01710 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D E3D00_09755 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D E3D00_09215 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ssam01501] D E3D00_05830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3D00_05835 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D E3D00_05840 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_03410 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3D00_07725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E3D00_00785 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ssam01502] D E3D00_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3D00_03905 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E3D00_00795 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D E3D00_00800 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E3D00_00815 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ssam01503] D E3D00_07685 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E3D00_05275 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_05390 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_06220 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_05830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3D00_05835 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_08110 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3D00_08470 lysylphosphatidylglycerol synthetase family protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ssam01000] C 01001 Protein kinases [BR:ssam01001] D E3D00_01035 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D E3D00_05775 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E3D00_00595 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D E3D00_05335 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D E3D00_06920 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D E3D00_01515 response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D E3D00_01050 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ssam01009] D E3D00_04565 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D E3D00_04370 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3D00_04600 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:ssam01002] D E3D00_03600 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D E3D00_08670 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D E3D00_05380 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase D E3D00_03435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D E3D00_06525 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D E3D00_08255 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D E3D00_00035 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D E3D00_08745 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D E3D00_08260 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D E3D00_09055 M13 family peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-] D E3D00_02800 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D E3D00_01635 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D E3D00_08530 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D E3D00_09720 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D E3D00_08165 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D E3D00_02875 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D E3D00_10080 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D E3D00_06800 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-] D E3D00_06765 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3D00_08085 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D E3D00_03685 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D E3D00_08645 trypsin-like serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D E3D00_05275 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_05390 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_06220 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_00620 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D E3D00_05655 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D E3D00_00105 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E3D00_00445 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D E3D00_02565 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D E3D00_00435 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D E3D00_09740 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D E3D00_10455 S24 family peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D E3D00_08045 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D E3D00_01775 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D E3D00_03525 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D E3D00_00665 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D E3D00_01505 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D E3D00_02505 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_02870 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D E3D00_08315 TldD/PmbA family protein K03592 pmbA; PmbA protein D E3D00_04675 tldD; metalloprotease TldD K03568 tldD; TldD protein D E3D00_04970 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin C 01003 Glycosyltransferases [BR:ssam01003] D E3D00_00640 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D E3D00_02980 glycosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D E3D00_04975 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D E3D00_03410 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3D00_05045 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D E3D00_05665 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ssam01005] D E3D00_08110 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D E3D00_01445 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D E3D00_00850 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D E3D00_08100 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D E3D00_08115 LpxI family protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D E3D00_08835 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D E3D00_08830 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D E3D00_00290 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D E3D00_08840 DUF374 domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D E3D00_09765 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D E3D00_00315 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D E3D00_08225 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D E3D00_01485 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D E3D00_01480 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D E3D00_04805 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D E3D00_04185 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ssam01011] D E3D00_05180 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D E3D00_00825 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D E3D00_00820 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D E3D00_00805 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D E3D00_00790 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D E3D00_00830 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D E3D00_03905 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D E3D00_08895 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D E3D00_00800 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D E3D00_00815 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D E3D00_00135 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D E3D00_08355 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D E3D00_03410 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D E3D00_04975 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D E3D00_07725 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D E3D00_00785 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D E3D00_00105 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D E3D00_09850 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D E3D00_02425 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D E3D00_08400 murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D E3D00_00115 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D E3D00_09110 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D E3D00_00110 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D E3D00_07055 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D E3D00_07685 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ssam01004] D E3D00_09090 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D E3D00_00570 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D E3D00_09105 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D E3D00_09095 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D E3D00_08105 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D E3D00_08860 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D E3D00_00195 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D E3D00_09180 fatty acyl-AMP ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D E3D00_00575 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D E3D00_03510 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D E3D00_01545 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ssam01006] D E3D00_01395 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D E3D00_08890 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D E3D00_08070 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D E3D00_04605 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D E3D00_08795 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D E3D00_08305 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:ssam01007] D E3D00_08465 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D E3D00_03495 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_07880 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_05895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3D00_01440 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D E3D00_07895 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E3D00_07785 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3D00_00090 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E3D00_03605 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E3D00_10260 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E3D00_02140 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3D00_07760 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3D00_00180 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E3D00_07745 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D E3D00_07740 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D E3D00_07815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E3D00_00405 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E3D00_05310 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E3D00_07940 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E3D00_01455 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E3D00_01450 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E3D00_00960 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_00965 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D E3D00_02575 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D E3D00_04670 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D E3D00_06815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D E3D00_06500 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D E3D00_09170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D E3D00_05690 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D E3D00_02905 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D E3D00_03690 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D E3D00_05695 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D E3D00_06990 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_05060 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D E3D00_06280 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D E3D00_08550 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:ssam00194] D E3D00_03290 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D E3D00_03295 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D E3D00_03300 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D E3D00_03305 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D E3D00_03310 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D E3D00_04705 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3D00_04710 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D E3D00_04720 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3D00_04725 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ssam03000] D E3D00_07535 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3D00_05930 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D E3D00_06130 LysR family transcriptional regulator K24082 pgrR; LysR family transcriptional regulator, regulator of peptidoglycan recycling D E3D00_05435 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D E3D00_09290 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D E3D00_03450 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D E3D00_05485 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D E3D00_05345 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D E3D00_04215 cyclic nucleotide-binding domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D E3D00_00420 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D E3D00_01740 transcriptional regulator K07727 K07727; putative transcriptional regulator D E3D00_05300 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3D00_09285 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D E3D00_10485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3D00_04490 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3D00_08985 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D E3D00_03415 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D E3D00_06330 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D E3D00_02945 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D E3D00_10215 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D E3D00_00770 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:ssam03021] D E3D00_01885 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E3D00_02035 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E3D00_02030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E3D00_08030 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E3D00_01710 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D E3D00_10180 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D E3D00_07180 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D E3D00_02375 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D E3D00_10220 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D E3D00_03330 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D E3D00_02945 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D E3D00_01745 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D E3D00_08285 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D E3D00_04520 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ssam03019] D E3D00_07680 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D E3D00_08050 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E3D00_00410 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D E3D00_09935 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D E3D00_01140 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D E3D00_06315 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D E3D00_10205 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D E3D00_09755 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3D00_02345 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E3D00_04520 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D E3D00_05140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3D00_08450 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3D00_06930 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3D00_08610 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D E3D00_01795 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D E3D00_01785 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D E3D00_05340 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D E3D00_05265 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:ssam03011] D E3D00_02820 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D E3D00_00385 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D E3D00_01975 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D E3D00_07910 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D E3D00_01920 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D E3D00_01700 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D E3D00_02020 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D E3D00_01935 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D E3D00_06985 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D E3D00_02010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D E3D00_01890 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D E3D00_02025 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D E3D00_01895 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D E3D00_01940 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D E3D00_02350 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D E3D00_01000 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D E3D00_01960 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D E3D00_01695 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D E3D00_01985 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D E3D00_10305 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D E3D00_00615 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D E3D00_02050 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D E3D00_01990 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D E3D00_02005 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D E3D00_02000 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D E3D00_01945 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D E3D00_01930 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D E3D00_01690 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D E3D00_02045 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D E3D00_02055 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D E3D00_02040 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D E3D00_06980 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D E3D00_01955 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D E3D00_01910 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D E3D00_01970 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D E3D00_01880 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D E3D00_01925 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D E3D00_00985 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D E3D00_01460 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D E3D00_00720 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D E3D00_01980 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D E3D00_01995 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D E3D00_01950 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D E3D00_00725 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D E3D00_00535 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D E3D00_01965 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D E3D00_01915 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D E3D00_10135 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D E3D00_00580 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D E3D00_09745 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D E3D00_08130 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D E3D00_01465 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D E3D00_05630 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D E3D00_04820 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D E3D00_01200 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D E3D00_01185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ssam03009] D E3D00_08050 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E3D00_08055 GTPase Era K03595 era; GTPase D E3D00_00730 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D E3D00_02945 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D E3D00_02375 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D E3D00_10220 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D E3D00_03330 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D E3D00_01675 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D E3D00_09695 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D E3D00_02310 rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D E3D00_05370 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D E3D00_08800 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D E3D00_04500 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D E3D00_00775 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D E3D00_08815 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D E3D00_01405 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D E3D00_02225 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D E3D00_09675 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D E3D00_04850 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D E3D00_08370 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D E3D00_01415 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D E3D00_00475 class I SAM-dependent RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D E3D00_05360 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D E3D00_05375 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D E3D00_06645 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D E3D00_07185 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D E3D00_05470 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D E3D00_00995 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D E3D00_10090 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D E3D00_07680 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12] D E3D00_02215 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D E3D00_06315 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D E3D00_08775 ribosome biogenesis GTPase Der K03977 engA; GTPase D E3D00_06935 hflX; GTPase HflX K03665 hflX; GTPase D E3D00_01645 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D E3D00_08035 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D E3D00_02360 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D E3D00_02380 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D E3D00_04845 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D E3D00_08945 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D E3D00_04830 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:ssam03016] D E3D00_03495 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_07880 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_00405 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D E3D00_03605 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D E3D00_02140 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3D00_00090 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D E3D00_07785 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3D00_07760 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3D00_07940 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D E3D00_05310 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D E3D00_07815 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D E3D00_07895 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D E3D00_10260 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D E3D00_00180 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D E3D00_01455 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D E3D00_01450 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D E3D00_05895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3D00_01440 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D E3D00_09995 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D E3D00_05120 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D E3D00_08175 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D E3D00_02355 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D E3D00_05905 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_05910 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_01645 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D E3D00_04605 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D E3D00_04510 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D E3D00_04505 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D E3D00_01640 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D E3D00_08135 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D E3D00_08230 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D E3D00_03025 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D E3D00_08485 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D E3D00_05550 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D E3D00_08465 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D E3D00_07745 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D E3D00_07740 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D E3D00_04430 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D E3D00_05385 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D E3D00_06910 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D E3D00_08955 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D E3D00_06300 MiaB/RimO family radical SAM methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D E3D00_07890 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D E3D00_00990 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D E3D00_05360 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D E3D00_05920 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D E3D00_01385 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D E3D00_00480 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D E3D00_06260 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D E3D00_02470 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D E3D00_02465 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D E3D00_02475 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D E3D00_03090 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D E3D00_06245 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D E3D00_06255 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D E3D00_06760 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D E3D00_05465 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D E3D00_08375 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D E3D00_03045 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D E3D00_02345 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D E3D00_06190 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D E3D00_10355 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:ssam03012] D E3D00_02365 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D E3D00_05305 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D E3D00_08565 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D E3D00_00380 elongation factor Ts K02357 tsf; elongation factor Ts D E3D00_02015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3D00_00530 fusA; elongation factor G K02355 fusA; elongation factor G D E3D00_00175 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D E3D00_08065 ribosome recycling factor K02838 frr; ribosome recycling factor D E3D00_00165 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D E3D00_04825 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D E3D00_04290 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D E3D00_01330 efp; elongation factor P K02356 efp; elongation factor P D E3D00_01320 genX; EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D E3D00_03405 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D E3D00_07915 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:ssam03110] D E3D00_02890 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D E3D00_06340 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D E3D00_00440 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D E3D00_01500 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D E3D00_04370 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3D00_05140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3D00_08450 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3D00_05135 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D E3D00_06235 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D E3D00_03700 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D E3D00_05325 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D E3D00_10130 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA D E3D00_08520 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D E3D00_08445 co-chaperone GroES K04078 groES; chaperonin GroES D E3D00_05275 PDZ domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_05390 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_06220 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107] D E3D00_06765 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D E3D00_04720 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D E3D00_08390 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_09570 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_01010 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D E3D00_10210 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D E3D00_02750 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D E3D00_01425 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D E3D00_06695 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D E3D00_01670 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D E3D00_03030 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D E3D00_05520 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D E3D00_00215 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D E3D00_09895 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D E3D00_06570 redoxin domain-containing protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:ssam04131] D E3D00_08570 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_02270 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3D00_06870 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D E3D00_09625 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3D00_04370 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3D00_06740 energy transducer TonB K23612 WASL; neural Wiskott-Aldrich syndrome protein D E3D00_09115 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1 C 04121 Ubiquitin system C 03051 Proteasome [BR:ssam03051] D E3D00_04370 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:ssam03032] D E3D00_00905 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D E3D00_07535 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3D00_00430 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3D00_00565 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D E3D00_00660 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D E3D00_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E3D00_03850 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D E3D00_01715 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D E3D00_07560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_03940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_00390 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3D00_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3D00_01630 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3D00_02130 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3D00_00095 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3D00_08730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3D00_02860 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3D00_07650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3D00_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E3D00_05000 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E3D00_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E3D00_00365 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3D00_03550 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3D00_03520 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ssam03036] D E3D00_07535 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3D00_08050 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_00430 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3D00_00565 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D E3D00_00660 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D E3D00_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D E3D00_06930 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D E3D00_09290 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D E3D00_08925 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D E3D00_07795 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D E3D00_07800 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D E3D00_00840 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D E3D00_01530 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D E3D00_00785 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D E3D00_05365 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D E3D00_00835 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D E3D00_00810 cell division protein FtsW K03588 ftsW; cell division protein FtsW D E3D00_01535 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D E3D00_00845 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3D00_01290 cell division protein ZapA K09888 zapA; cell division protein ZapA D E3D00_07685 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D E3D00_05830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3D00_02105 minC; septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC D E3D00_02110 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D E3D00_02115 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D E3D00_07710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3D00_07715 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D E3D00_07730 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D E3D00_10480 chromosome partitioning protein K03496 parA; chromosome partitioning protein D E3D00_04495 ParA family protein K03496 parA; chromosome partitioning protein D E3D00_10485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3D00_04490 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3D00_00365 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3D00_03550 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3D00_04505 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D E3D00_04500 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D E3D00_05610 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D E3D00_07965 tyrosine recombinase K04763 xerD; integrase/recombinase XerD D E3D00_06175 site-specific integrase K04763 xerD; integrase/recombinase XerD D E3D00_10340 site-specific integrase K04763 xerD; integrase/recombinase XerD D E3D00_06215 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D E3D00_08150 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:ssam03400] D E3D00_04515 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D E3D00_04585 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D E3D00_03465 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D E3D00_07985 GNAT family N-acetyltransferase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D E3D00_10285 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D E3D00_07855 alkB; DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D E3D00_02430 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D E3D00_01680 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D E3D00_10300 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D E3D00_09715 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E3D00_07770 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D E3D00_02590 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D E3D00_00865 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D E3D00_07650 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D E3D00_03945 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D E3D00_08275 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D E3D00_09725 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D E3D00_10095 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D E3D00_02035 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D E3D00_02030 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D E3D00_01885 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D E3D00_08030 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D E3D00_00280 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D E3D00_08350 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D E3D00_03590 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D E3D00_07670 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E3D00_02280 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D E3D00_01390 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D E3D00_00390 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D E3D00_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D E3D00_01630 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D E3D00_02130 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D E3D00_00095 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D E3D00_08730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D E3D00_02860 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D E3D00_07560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_03940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_02555 recA; recombinase RecA K03553 recA; recombination protein RecA D E3D00_06715 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D E3D00_06720 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D E3D00_06710 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D E3D00_05615 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D E3D00_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D E3D00_00285 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D E3D00_00375 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D E3D00_02850 recR; recombination protein RecR K06187 recR; recombination protein RecR D E3D00_00860 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D E3D00_03035 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D E3D00_03040 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D E3D00_05000 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D E3D00_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D E3D00_03520 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D E3D00_00430 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D E3D00_00565 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D E3D00_00660 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D E3D00_10205 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D E3D00_05225 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D E3D00_10450 Y-family DNA polymerase K03502 umuC; DNA polymerase V D E3D00_10455 S24 family peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D E3D00_09740 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D E3D00_03680 regulatory protein RecX K03565 recX; regulatory protein D E3D00_08460 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D E3D00_08875 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3D00_04730 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D E3D00_08880 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ssam03029] D E3D00_02365 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D E3D00_05305 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D E3D00_00380 elongation factor Ts K02357 tsf; elongation factor Ts D E3D00_02015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3D00_00530 fusA; elongation factor G K02355 fusA; elongation factor G D E3D00_07825 RNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D E3D00_08525 DNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6] D E3D00_08055 GTPase Era K03595 era; GTPase D E3D00_05895 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D E3D00_02140 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D E3D00_07760 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D E3D00_07785 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D E3D00_02205 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D E3D00_02200 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D E3D00_02210 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D E3D00_07560 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_03940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D E3D00_08090 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D E3D00_05140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3D00_05325 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D E3D00_08450 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3D00_08445 co-chaperone GroES K04078 groES; chaperonin GroES D E3D00_05135 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D E3D00_05905 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_05910 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_09895 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D E3D00_09010 folate-binding protein K22073 IBA57; transferase CAF17, mitochondrial [EC:2.1.-.-] D E3D00_06215 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D E3D00_08305 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D E3D00_08145 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3D00_07655 SCO family protein K07152 SCO1; protein SCO1 D E3D00_05205 SCO family protein K07152 SCO1; protein SCO1 D E3D00_04370 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ssam02000] D E3D00_01790 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D E3D00_05710 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D E3D00_03435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D E3D00_03460 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D E3D00_00540 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D E3D00_10195 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D E3D00_10190 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D E3D00_10165 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D E3D00_05965 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D E3D00_05970 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D E3D00_09060 hypothetical protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D E3D00_10280 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein D E3D00_10275 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D E3D00_09030 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3D00_04735 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3D00_00130 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D E3D00_09020 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3D00_04040 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D E3D00_09025 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3D00_04045 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D E3D00_02975 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3D00_05560 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D E3D00_04000 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D E3D00_05750 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D E3D00_05755 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D E3D00_05760 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D E3D00_04135 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D E3D00_04145 ABC transporter permease K02072 metI; D-methionine transport system permease protein D E3D00_04140 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein D E3D00_02400 transporter substrate-binding domain-containing protein K02029 ABC.PA.P; polar amino acid transport system permease protein D E3D00_07660 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D E3D00_03205 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D E3D00_03210 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D E3D00_03200 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D E3D00_09450 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D E3D00_02755 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D E3D00_09455 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D E3D00_02765 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D E3D00_09445 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D E3D00_02760 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D E3D00_04440 ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D E3D00_04450 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D E3D00_04445 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D E3D00_05055 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D E3D00_06040 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3D00_02480 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D E3D00_02485 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3D00_06045 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D E3D00_01655 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D E3D00_09150 YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D E3D00_01660 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D E3D00_09145 YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein D E3D00_08210 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D E3D00_00400 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D E3D00_00395 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D E3D00_06585 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D E3D00_06590 heme ABC transporter permease K02195 ccmC; heme exporter protein C D E3D00_02415 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D E3D00_02410 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D E3D00_01535 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D E3D00_01530 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D E3D00_00500 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D E3D00_04375 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D E3D00_07900 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D E3D00_04350 multidrug transporter K26937 dinF; MATE family, multidrug efflux pump D E3D00_08780 sugar porter family MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D E3D00_05355 sugar porter family MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D E3D00_04015 sugar porter family MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter D E3D00_03935 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D E3D00_06490 MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter D E3D00_10045 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D E3D00_05245 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D E3D00_09470 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D E3D00_03995 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D E3D00_08625 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D E3D00_02305 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D E3D00_05430 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D E3D00_08785 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D E3D00_03075 hypothetical protein K08715 IRPC; inward rectifier potassium channel D E3D00_05595 ammonium transporter K03320 amt; ammonium transporter, Amt family D E3D00_05925 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D E3D00_02100 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D E3D00_02260 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D E3D00_10140 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D E3D00_06875 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D E3D00_03425 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D E3D00_03150 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D E3D00_00625 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D E3D00_01350 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D E3D00_00630 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D E3D00_03395 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D E3D00_03385 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D E3D00_03390 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D E3D00_06730 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D E3D00_06735 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D E3D00_03880 magnesium transporter K03284 corA; magnesium transporter D E3D00_04570 magnesium transporter K16074 zntB; zinc transporter D E3D00_08990 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D E3D00_02965 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3D00_00870 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3D00_03535 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D E3D00_07950 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D E3D00_03160 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D E3D00_07220 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_10065 heme receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_05195 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_09440 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_02125 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_02715 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_02550 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_08455 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D E3D00_01230 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_02060 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system D E3D00_05840 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3D00_05050 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein D E3D00_06015 carbohydrate porin K07267 oprB; porin D E3D00_06020 carbohydrate porin K07267 oprB; porin D E3D00_03370 carbohydrate porin K07267 oprB; porin D E3D00_09080 carbohydrate porin K07267 oprB; porin D E3D00_03650 carbohydrate porin K07267 oprB; porin D E3D00_05005 carbohydrate porin K07267 oprB; porin D E3D00_05535 carbohydrate porin K07267 oprB; porin D E3D00_03920 carbohydrate porin K07267 oprB; porin D E3D00_08090 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D E3D00_08770 dehydrogenase K17713 bamB; outer membrane protein assembly factor BamB D E3D00_00855 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D E3D00_08965 hypothetical protein K07278 tamA; translocation and assembly module TamA D E3D00_08970 hypothetical protein K09800 tamB; translocation and assembly module TamB D E3D00_08215 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D E3D00_08220 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D E3D00_01665 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D E3D00_02135 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D E3D00_08940 HlyC/CorC family transporter K06189 corC; hemolysin (HlyC) family protein D E3D00_02290 amino acid permease K11735 gabP; GABA permease D E3D00_03560 amino acid permease K11735 gabP; GABA permease D E3D00_05795 amino acid permease K11738 ansP; L-asparagine permease D E3D00_06475 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D E3D00_01220 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein D E3D00_04200 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein D E3D00_05835 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D E3D00_01855 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump D E3D00_01860 nodulation protein K07789 mdtC; multidrug efflux pump D E3D00_04110 nodulation protein K07789 mdtC; multidrug efflux pump D E3D00_06965 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump D E3D00_09950 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D E3D00_09465 permease DsdX K03299 TC.GNTP; gluconate:H+ symporter, GntP family D E3D00_02790 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D E3D00_00070 cyclic nucleotide-binding domain-containing protein K03316 nhaP; Na+:H+ antiporter D E3D00_06890 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D E3D00_01375 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D E3D00_06465 chloride channel protein K03281 clcA; chloride channel protein, CIC family D E3D00_02235 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family D E3D00_06955 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D E3D00_09195 divalent metal cation transporter K03322 mntH; manganese transport protein D E3D00_08355 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D E3D00_02630 permease K13936 mdcF; malonate transporter and related proteins D E3D00_07160 permease K13936 mdcF; malonate transporter and related proteins D E3D00_02320 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D E3D00_06550 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D E3D00_06545 AzlD family protein K26606 azlD; branched chain amino acid efflux pump D E3D00_06080 fusaric acid resistance protein K15547 mdtO; multidrug resistance protein MdtO D E3D00_08475 MarC family protein K05595 marC; multiple antibiotic resistance protein D E3D00_00810 cell division protein FtsW K03588 ftsW; cell division protein FtsW D E3D00_03400 energy transducer TonB K03832 tonB; periplasmic protein TonB D E3D00_04160 energy transducer TonB K03832 tonB; periplasmic protein TonB D E3D00_06750 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D E3D00_06745 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D E3D00_05425 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system D E3D00_06085 mdtN; multidrug transporter subunit MdtN K15549 mdtN; membrane fusion protein, multidrug efflux system D E3D00_04205 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D E3D00_05715 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D E3D00_03430 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein D E3D00_05830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3D00_01850 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system D E3D00_05850 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D E3D00_03240 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D E3D00_03245 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D E3D00_06575 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D E3D00_04385 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:ssam02044] D E3D00_05710 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB D E3D00_05715 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_03430 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein D E3D00_03435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D E3D00_04690 YggT family protein K02221 yggT; YggT family protein D E3D00_03480 ComEC family competence protein K02238 comEC; competence protein ComEC D E3D00_07135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D E3D00_02545 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D E3D00_07115 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D E3D00_06785 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D E3D00_07130 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3D00_02515 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D E3D00_02510 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D E3D00_02535 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D E3D00_02540 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR D E3D00_01060 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D E3D00_01065 type VI secretion system protein TssL K11892 impK; type VI secretion system protein ImpK D E3D00_01070 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D E3D00_01130 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D E3D00_01125 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D E3D00_01120 tssE; type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF D E3D00_01105 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D E3D00_01100 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D E3D00_01095 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA D E3D00_01085 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp D E3D00_01080 tssI; type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D E3D00_01090 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D E3D00_01055 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM D E3D00_01115 tetratricopeptide repeat protein K11898 impE; type VI secretion system protein ImpE D E3D00_01110 tssC; type VI secretion system contractile sheath large subunit K11899 impD; type VI secretion system protein ImpD D E3D00_01075 tagH; type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein D E3D00_06700 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D E3D00_08390 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_09570 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D E3D00_10155 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D E3D00_03325 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D E3D00_10150 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D E3D00_09775 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D E3D00_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D E3D00_01005 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D E3D00_06295 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D E3D00_07995 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D E3D00_08145 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D E3D00_03640 Sec-independent protein translocase TatA K03116 tatA; sec-independent protein translocase protein TatA D E3D00_07805 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D E3D00_07810 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:ssam02042] D E3D00_02965 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D E3D00_00870 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:ssam02022] D E3D00_05775 two-component sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D E3D00_05770 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D E3D00_00595 HAMP domain-containing protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D E3D00_00600 response regulator transcription factor K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D E3D00_05335 HAMP domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D E3D00_05330 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI D E3D00_05280 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D E3D00_02080 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D E3D00_02680 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D E3D00_01025 response regulator K02483 K02483; two-component system, OmpR family, response regulator D E3D00_05445 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D E3D00_06920 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D E3D00_06925 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D E3D00_01515 response regulator K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D E3D00_05785 chemotaxis protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3D00_01050 hypothetical protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D E3D00_06780 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:ssam02035] D E3D00_05785 chemotaxis protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D E3D00_06785 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D E3D00_06790 hypothetical protein K02413 fliJ; flagellar protein FliJ D E3D00_02515 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D E3D00_02510 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D E3D00_02535 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D E3D00_02540 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR D E3D00_07135 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D E3D00_02545 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D E3D00_07120 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D E3D00_05810 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D E3D00_07130 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D E3D00_07115 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D E3D00_02950 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D E3D00_04115 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D E3D00_03375 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D E3D00_05805 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D E3D00_02530 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D E3D00_02520 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D E3D00_02525 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D E3D00_07110 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D E3D00_04125 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D E3D00_04120 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D E3D00_02955 chemotaxis protein chel K02395 flgJ; peptidoglycan hydrolase FlgJ D E3D00_04355 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D E3D00_04360 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D E3D00_04365 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D E3D00_05420 flagellin B K02406 fliC; flagellin D E3D00_00625 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D E3D00_01350 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB D E3D00_00630 chemotaxis protein MotB K02557 motB; chemotaxis protein MotB D E3D00_07140 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ssam04812] D E3D00_06740 energy transducer TonB K23612 WASL; neural Wiskott-Aldrich syndrome protein D E3D00_07710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3D00_00845 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3D00_00840 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D E3D00_02105 minC; septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC D E3D00_02110 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D E3D00_02115 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D E3D00_10480 chromosome partitioning protein K03496 parA; chromosome partitioning protein D E3D00_04495 ParA family protein K03496 parA; chromosome partitioning protein D E3D00_10485 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D E3D00_04490 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ssam04147] D E3D00_04370 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D E3D00_09305 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D E3D00_09755 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D E3D00_02270 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D E3D00_02265 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D E3D00_09625 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D E3D00_09720 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D E3D00_08450 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D E3D00_05140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D E3D00_09690 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D E3D00_02015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D E3D00_09995 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D E3D00_04375 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D E3D00_04565 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D E3D00_01900 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D E3D00_05255 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D E3D00_08705 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D E3D00_01420 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D E3D00_04665 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D E3D00_09910 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D E3D00_00325 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D E3D00_07095 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D E3D00_09825 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D E3D00_05105 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D E3D00_00750 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D E3D00_06870 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ssam02048] D E3D00_04940 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D E3D00_04935 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D E3D00_04920 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D E3D00_01830 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72] D E3D00_07535 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D E3D00_06190 vapC; tRNA(fMet)-specific endonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D E3D00_10355 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D E3D00_06185 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D E3D00_10350 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D E3D00_00845 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D E3D00_07710 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D E3D00_00365 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D E3D00_03550 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D E3D00_03495 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_07880 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D E3D00_05905 aminotransferase class V-fold PLP-dependent enzyme K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D E3D00_05910 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:ssam01504] D E3D00_03095 AAC(3) family N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81] D E3D00_08470 lysylphosphatidylglycerol synthetase family protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D E3D00_05830 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D E3D00_05835 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D E3D00_05840 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D E3D00_05435 TetR/AcrR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D E3D00_10250 secretion protein K12340 tolC; outer membrane protein D E3D00_06075 TolC family protein K12340 tolC; outer membrane protein D E3D00_02060 efflux transporter outer membrane subunit K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ssam00537] D E3D00_09720 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ssam03100] D E3D00_04425 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_01190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_01260 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_03275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_04890 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_06355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_09235 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D E3D00_00880 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_07640 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_08655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_08660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D E3D00_00900 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D E3D00_02450 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D E3D00_10245 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D E3D00_04785 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3D00_09685 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D E3D00_10000 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3D00_02595 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D E3D00_05525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3D00_03315 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3D00_05530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D E3D00_06960 tRNA-His K14226 tRNA-His; tRNA His D E3D00_01195 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_01265 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_03280 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_04885 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_06350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_09230 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D E3D00_00235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_00455 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_02785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_05945 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_06275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_08235 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D E3D00_04980 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3D00_04485 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D E3D00_00150 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_01175 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_01245 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_04905 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_05545 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_09250 tRNA-Met K14230 tRNA-Met; tRNA Met D E3D00_04310 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D E3D00_00555 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3D00_00885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D E3D00_01015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_02195 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_09545 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_00715 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D E3D00_06210 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3D00_02940 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3D00_03350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D E3D00_03320 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D E3D00_02230 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D E3D00_00425 tRNA-Val K14237 tRNA-Val; tRNA Val D E3D00_10010 tRNA-Val K14237 tRNA-Val; tRNA Val D E3D00_01200 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D E3D00_01185 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D E3D00_09460 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D E3D00_09640 NAD-dependent epimerase/dehydratase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D E3D00_03070 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D E3D00_03125 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D E3D00_03660 GMC family oxidoreductase K23273 fdhL; fructose 5-dehydrogenase large subunit [EC:1.1.5.14] D E3D00_06395 GMC family oxidoreductase K23273 fdhL; fructose 5-dehydrogenase large subunit [EC:1.1.5.14] D E3D00_06400 hypothetical protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D E3D00_03670 dehydrogenase K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14] D E3D00_04260 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D E3D00_02775 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D E3D00_02780 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D E3D00_03485 oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D E3D00_05115 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D E3D00_03185 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D E3D00_10270 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D E3D00_01765 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D E3D00_08010 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D E3D00_08410 c-type cytochrome K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D E3D00_02620 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D E3D00_06630 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D E3D00_06030 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D E3D00_03190 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D E3D00_08870 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D E3D00_09265 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D E3D00_10070 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D E3D00_05030 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D E3D00_03050 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58] D E3D00_02720 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D E3D00_09660 FAD-dependent oxidoreductase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D E3D00_07830 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D E3D00_04250 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D E3D00_01685 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D E3D00_09485 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D E3D00_05495 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D E3D00_08960 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D E3D00_10085 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D E3D00_06610 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D E3D00_00360 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D E3D00_05490 GNAT family N-acetyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30] D E3D00_09655 hpnD; presqualene diphosphate synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103] D E3D00_04810 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D E3D00_06725 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D E3D00_00085 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D E3D00_04155 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D E3D00_02880 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D E3D00_08185 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D E3D00_00610 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D E3D00_07145 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D E3D00_01805 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D E3D00_00460 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D E3D00_09650 hpnC; squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156] D E3D00_05870 AGE family epimerase/isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D E3D00_05915 2Fe-2S iron-sulfur cluster binding domain-containing protein K04755 fdx; ferredoxin, 2Fe-2S D E3D00_08515 ferredoxin family protein K05524 fdxA; ferredoxin D E3D00_01595 hypothetical protein K15832 hycG; formate hydrogenlyase subunit 7 D E3D00_05110 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D E3D00_03665 cytochrome c K23275 fdhC; fructose 5-dehydrogenase cytochrome subunit D E3D00_06390 cytochrome c K23275 fdhC; fructose 5-dehydrogenase cytochrome subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D E3D00_02315 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D E3D00_09560 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A D E3D00_03610 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D E3D00_09355 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW D E3D00_09835 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism D E3D00_02255 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D E3D00_02705 aromatic ring-hydroxylating dioxygenase subunit alpha K22895 cruH; renierapurpurin 18,18'-hydroxylase C 99999 Others D E3D00_05270 DoxX family protein K15977 K15977; putative oxidoreductase D E3D00_09280 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D E3D00_00295 cold-shock protein K03704 cspA; cold shock protein D E3D00_02650 cold-shock protein K03704 cspA; cold shock protein D E3D00_05590 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation C 99975 Protein processing D E3D00_02885 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D E3D00_00450 trigger factor K03545 tig; trigger factor D E3D00_08015 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D E3D00_00300 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D E3D00_00330 ATP-binding protein K07391 comM; magnesium chelatase family protein D E3D00_05080 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D E3D00_06445 SelT/SelW/SelH family protein K07401 K07401; selenoprotein W-related protein D E3D00_07005 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D E3D00_10100 DNA repair protein RadC K03630 radC; DNA repair protein RadC D E3D00_10105 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D E3D00_02085 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D E3D00_09905 YraN family protein K07460 yraN; putative endonuclease D E3D00_03515 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein D E3D00_07455 PBSX family phage terminase large subunit K06909 xtmB; phage terminase large subunit D E3D00_06640 replication-associated recombination protein A K07478 ycaJ; putative ATPase D E3D00_10430 recombinase family protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D E3D00_10425 IS6 family transposase K07498 K07498; putative transposase D E3D00_10330 IS6 family transposase K07498 K07498; putative transposase D E3D00_10360 IS6 family transposase K07498 K07498; putative transposase D E3D00_10395 IS6 family transposase K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D E3D00_02855 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D E3D00_00140 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D E3D00_09915 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D E3D00_00075 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D E3D00_06010 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D E3D00_09510 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family C 99978 Cell growth D E3D00_02805 hypothetical protein K06320 cgeB; spore maturation protein CgeB D E3D00_01770 hypothetical protein K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D E3D00_03085 typA; translational GTPase TypA K06207 typA; GTP-binding protein D E3D00_08950 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D E3D00_07755 rubredoxin-NAD(+) reductase K22747 AIFM3; apoptosis-inducing factor 3 C 99992 Structural proteins D E3D00_05565 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D E3D00_04210 OmpW family protein K07275 ompW; outer membrane protein D E3D00_06650 AsmA family protein K07289 asmA; AsmA protein D E3D00_01370 AsmA family protein K07290 yhjG; AsmA family protein D E3D00_06580 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D E3D00_06560 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D E3D00_06565 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D E3D00_00190 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ D E3D00_05985 DUF1656 domain-containing protein K21695 aaeX; protein AaeX C 99994 Others D E3D00_05765 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D E3D00_03910 bacterioferritin K02192 bfd; bacterioferritin-associated ferredoxin D E3D00_05670 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D E3D00_06665 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D E3D00_03235 copper resistance protein B K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D E3D00_06520 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D E3D00_03340 MCE family protein K06192 pqiB; paraquat-inducible protein B D E3D00_04265 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D E3D00_04255 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D E3D00_07775 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D E3D00_00505 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D E3D00_00495 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D E3D00_07090 metal-dependent hydrolase K07038 K07038; inner membrane protein D E3D00_07050 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D E3D00_01495 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D E3D00_03955 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D E3D00_03655 heme-binding protein K11477 glcG; glc operon protein GlcG D E3D00_03345 paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A D E3D00_00935 DUF4142 domain-containing protein K08995 K08995; putative membrane protein D E3D00_09275 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D E3D00_06820 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D E3D00_06120 alpha/beta hydrolase K06889 K06889; uncharacterized protein D E3D00_06125 alpha/beta hydrolase K06889 K06889; uncharacterized protein D E3D00_08490 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein D E3D00_07990 ATP-binding protein K06923 K06923; uncharacterized protein D E3D00_04085 RND transporter K07003 K07003; uncharacterized protein D E3D00_05900 alpha/beta hydrolase K07018 K07018; uncharacterized protein D E3D00_07695 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D E3D00_10470 hypothetical protein K07126 K07126; uncharacterized protein D E3D00_03615 sel1 repeat family protein K07126 K07126; uncharacterized protein D E3D00_05720 sel1 repeat family protein K07126 K07126; uncharacterized protein D E3D00_06485 FAD-binding protein K07137 K07137; uncharacterized protein D E3D00_08140 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D E3D00_04870 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D E3D00_01725 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D E3D00_05955 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D E3D00_06865 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D E3D00_05515 Trm112 family protein K09791 K09791; uncharacterized protein D E3D00_01780 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D E3D00_05295 DUF541 domain-containing protein K09807 K09807; uncharacterized protein D E3D00_03335 membrane integrity-associated transporter subunit PqiC K09857 K09857; uncharacterized protein D E3D00_04305 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D E3D00_04130 N-acetyltransferase K09919 K09919; uncharacterized protein D E3D00_07750 DUF2076 domain-containing protein K09945 K09945; uncharacterized protein D E3D00_01410 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein D E3D00_07450 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein D E3D00_06060 hypothetical protein K09985 K09985; uncharacterized protein D E3D00_01800 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D E3D00_10125 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein D E3D00_10255 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein D E3D00_09515 DUF47 family protein K07220 K07220; uncharacterized protein D E3D00_09940 hypothetical protein K07276 K07276; uncharacterized protein D E3D00_02370 RNA-binding protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024