+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Shewanella seohaensis

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E N7V09_08145 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D N7V09_08295 SPFH domain-containing protein K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D N7V09_16405 H-NS histone family protein K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D N7V09_15215 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D N7V09_10020 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D N7V09_20770 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D N7V09_14060 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D N7V09_13415 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D N7V09_02535 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D N7V09_03920 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D N7V09_00345 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D N7V09_20495 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D N7V09_15045 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D N7V09_03510 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N7V09_13110 lrp; leucine-responsive transcriptional regulator Lrp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D N7V09_11215 yejK; nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D N7V09_15740 segregation/condensation protein A K05896 scpA; segregation and condensation protein A C Divisome proteins D N7V09_04455 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D N7V09_17665 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D N7V09_03450 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D N7V09_04410 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D N7V09_13105 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D N7V09_04405 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D N7V09_04450 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D N7V09_04435 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D N7V09_03455 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D N7V09_04460 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D N7V09_15535 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D N7V09_05675 cell division protein ZapA K09888 zapA; cell division protein ZapA D N7V09_04070 cell division protein ZapB K09892 zapB; cell division protein ZapB D N7V09_14325 cell division protein ZapC K18657 zapC; cell division protein ZapC D N7V09_00260 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD D N7V09_19200 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D N7V09_19985 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE D N7V09_20510 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D N7V09_03080 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D N7V09_15015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D N7V09_13345 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D N7V09_14755 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D N7V09_11470 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D N7V09_11465 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D N7V09_03360 SulA-like leucine-rich domain-containing protein K13053 sulA; cell division inhibitor SulA D N7V09_04285 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D N7V09_12695 seqA; replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D N7V09_04960 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D N7V09_04965 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D N7V09_16615 ParA family protein K03496 parA; chromosome partitioning protein D N7V09_17115 AAA family ATPase K03496 parA; chromosome partitioning protein D N7V09_19780 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D N7V09_00370 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D N7V09_06575 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D N7V09_14460 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024