+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Streptococcus suis A7 (serotype 2)

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D SSUA7_1046 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C SSUA7_1239 era; GTP-binding protein Era K03595 era; GTPase C SSUA7_0701 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C SSUA7_1669 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C SSUA7_1644 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C SSUA7_1804 nusG; transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D SSUA7_1760 16S rRNA uridine-516 pseudouridylate synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D SSUA7_0600 16S rRNA uridine-516 pseudouridylate synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D SSUA7_1824 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SSUA7_0386 tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SSUA7_0953 16S RNA G1207 methylase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D SSUA7_1512 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SSUA7_1921 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SSUA7_0372 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SSUA7_1571 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SSUA7_0618 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SSUA7_0736 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D SSUA7_1485 rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D SSUA7_1310 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D SSUA7_1721 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SSUA7_1996 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D SSUA7_1114 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D SSUA7_1508 Fe-S-cluster redox protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SSUA7_1485 rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D SSUA7_0561 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D SSUA7_1531 16S rRNA uridine-516 pseudouridylate synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SSUA7_0729 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SSUA7_0929 pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SSUA7_1809 pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C SSUA7_1761 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C SSUA7_0158 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C SSUA7_0759 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C SSUA7_1922 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C SSUA7_1046 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3] C SSUA7_0064 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C SSUA7_1743 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C SSUA7_1405 superfamily II DNA/RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C SSUA7_1566 superfamily II DNA/RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C SSUA7_1239 era; GTP-binding protein Era K03595 era; GTPase C SSUA7_1816 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C SSUA7_1555 engA; GTP-binding protein EngA K03977 engA; GTPase C SSUA7_0701 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] C SSUA7_0848 GTP1/OBG protein K14540 rbgA; ribosome biogenesis GTPase A C SSUA7_1161 GTPase K03665 hflX; GTPase C SSUA7_0338 GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C SSUA7_0786 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C SSUA7_1909 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C SSUA7_1665 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C SSUA7_1670 hypothetical protein K09748 rimP; ribosome maturation factor RimP C SSUA7_1986 S4 domain protein YaaA K14761 rlbA; ribosome-associated protein C SSUA7_0344 hypothetical protein K09710 ybeB; ribosome-associated protein C SSUA7_1241 putative metalloprotease K07042 ybeY; probable rRNA maturation factor C SSUA7_0339 RNA-binding protein K07574 yhbY; RNA-binding protein C SSUA7_0399 ribosome-associated protein Y (PSrp-1) K05808 hpf; ribosome hibernation promoting factor C SSUA7_0006 GTP-binding protein K06942 ychF; ribosome-binding ATPase C SSUA7_1563 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024