+D GENES KO
#
KEGG Orthology (KO) - Staphylococcus simiae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ssim00010]
D SAMEA4384339_1438 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SAMEA4384339_0819 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_2306 fbp; Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_1960 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SAMEA4384339_0730 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMEA4384339_0728 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMEA4384339_1570 gapA2; glyceraldehyde 3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D SAMEA4384339_0729 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SAMEA4384339_2251 pgm_2; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0331 cobC_1; truncated phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0731 pgm_1; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SAMEA4384339_0732 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMEA4384339_1580 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SAMEA4384339_1005 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMEA4384339_1006 pdhB; Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMEA4384339_1007 pdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1174 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1175 porB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_2400 ldh2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0193 lctE; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2168 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_1668 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMEA4384339_0232 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SAMEA4384339_1322 crr; PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SAMEA4384339_2340 glcB; Pts system, glucose-specific iiabc component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_0140 ptsG; PTS system transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ssim00020]
D SAMEA4384339_1578 citZ; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D SAMEA4384339_1248 citB; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SAMEA4384339_1577 citC; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SAMEA4384339_1313 odhA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SAMEA4384339_1312 odhB; dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1174 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1175 porB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1132 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMEA4384339_1131 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMEA4384339_1053 sdhA_1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMEA4384339_1054 frdB; succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMEA4384339_1052 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMEA4384339_1738 citG; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SAMEA4384339_2201 mqo1; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SAMEA4384339_2413 mqo2; malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SAMEA4384339_1026 cfiB_1; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D SAMEA4384339_1668 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMEA4384339_1005 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMEA4384339_1006 pdhB; Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMEA4384339_1007 pdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ssim00030]
D SAMEA4384339_0819 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMEA4384339_1395 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SAMEA4384339_1842 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SAMEA4384339_1402 gnd_2; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SAMEA4384339_1108 cfxE; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMEA4384339_0106 alsE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMEA4384339_1241 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SAMEA4384339_1660 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SAMEA4384339_2167 rpi; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SAMEA4384339_0063 rpiB_1; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMEA4384339_0107 rpiB_2; ribose 5-phosphate isomerase B-like protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMEA4384339_0522 D-arabino-3-hexulose 6-phosphate formaldehyde lyase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D SAMEA4384339_0523 hxlB; sugar isomerase (SIS) K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D SAMEA4384339_1973 dra; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SAMEA4384339_0105 rbsK_1; putative ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SAMEA4384339_0236 rbsK_2; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SAMEA4384339_1971 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_0426 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMEA4384339_2086 3-oxoacyl-ACP reductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D SAMEA4384339_2298 xylB; gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_1960 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SAMEA4384339_2306 fbp; Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ssim00040]
D SAMEA4384339_2296 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0178 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0208 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_1108 cfxE; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMEA4384339_0106 alsE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMEA4384339_0504 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D SAMEA4384339_0205 gutB_3; sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SAMEA4384339_0207 gutB_4; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SAMEA4384339_0089 gutB_2; zinc-binding dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D SAMEA4384339_0503 dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D SAMEA4384339_0088 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:ssim00051]
D SAMEA4384339_1875 iolC; putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMEA4384339_1979 gmuF; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMEA4384339_0141 yvyI; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_2306 fbp; Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SAMEA4384339_1992 mtlD; Mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SAMEA4384339_0643 fruB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SAMEA4384339_0205 gutB_3; sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SAMEA4384339_0207 gutB_4; Sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_1960 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SAMEA4384339_0730 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMEA4384339_0063 rpiB_1; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMEA4384339_0107 rpiB_2; ribose 5-phosphate isomerase B-like protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMEA4384339_0644 fruA; PTS system fructose-specific transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SAMEA4384339_1991 mtlF_2; PTS system mannitol-specific transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SAMEA4384339_1989 mtlF_1; PTS system, mannitol specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:ssim00052]
D SAMEA4384339_2168 galM; Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SAMEA4384339_2296 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0178 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0208 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_1438 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SAMEA4384339_0202 manP; PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SAMEA4384339_0203 gatB_1; PTS system galactitol-specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SAMEA4384339_0204 gatC_2; PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D SAMEA4384339_2039 lacC; Tagatose-6-phosphate kinase / 1-phosphofructokinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_2038 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SAMEA4384339_2040 lacB; Galactose-6-phosphate isomerase, LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SAMEA4384339_2041 lacA; Galactose-6-phosphate isomerase, LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SAMEA4384339_2035 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SAMEA4384339_2037 lacF; PTS system lactose-specific transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SAMEA4384339_2036 lacE; PTS system, lactose-specific IIBC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SAMEA4384339_1876 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SAMEA4384339_0197 sacA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SAMEA4384339_1398 malA; alpha-D-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ssim00500]
D SAMEA4384339_2215 scrA; PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SAMEA4384339_1876 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SAMEA4384339_0197 sacA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SAMEA4384339_1398 malA; alpha-D-1,4-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SAMEA4384339_2296 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0178 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0208 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0232 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SAMEA4384339_1322 crr; PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SAMEA4384339_2153 glvC; PTS system, arbutin-like IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D SAMEA4384339_0393 treB; PTS system trehalose-specific transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SAMEA4384339_0394 treA; Trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_1438 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SAMEA4384339_0819 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMEA4384339_1875 iolC; putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ssim00520]
D SAMEA4384339_1322 crr; PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SAMEA4384339_1607 ptaA; PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SAMEA4384339_0645 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SAMEA4384339_0521 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SAMEA4384339_1875 iolC; putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SAMEA4384339_1987 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SAMEA4384339_1994 glmM; Phosphoglucosamine mutase / FemD, factor involved in methicillin resistance K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SAMEA4384339_0425 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SAMEA4384339_1935 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMEA4384339_1959 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMEA4384339_0684 murB; putative UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SAMEA4384339_1946 mnaA; UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SAMEA4384339_2340 glcB; Pts system, glucose-specific iiabc component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_0140 ptsG; PTS system transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_1438 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_2296 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0178 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0208 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0819 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMEA4384339_1979 gmuF; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMEA4384339_0141 yvyI; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:ssim00620]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_1174 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1175 porB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1005 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMEA4384339_1006 pdhB; Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMEA4384339_1007 pdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0163 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SAMEA4384339_1593 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMEA4384339_0536 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMEA4384339_1580 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SAMEA4384339_1582 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1419 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1494 accB_2; Biotin carboxyl carrier protein; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1418 cfiB_2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1493 accC; putative biotin carboxylase subunit of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1583 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1303 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0172 ctfA; putative acetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D SAMEA4384339_2341 pox5; Pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D SAMEA4384339_2400 ldh2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0193 lctE; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_2317 ldhD_1; D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SAMEA4384339_2365 ldhD_2; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SAMEA4384339_1400 Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SAMEA4384339_1436 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SAMEA4384339_0498 hchA_1; Chaperone protein hchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D SAMEA4384339_1584 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SAMEA4384339_1026 cfiB_1; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D SAMEA4384339_2201 mqo1; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SAMEA4384339_2413 mqo2; malate:quinone oxidoreductase 2 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SAMEA4384339_1738 citG; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SAMEA4384339_1668 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_1892 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ssim00630]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_1578 citZ; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D SAMEA4384339_1248 citB; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_1231 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D SAMEA4384339_0788 ghrB_1; Glyoxylate reductase / Glyoxylate reductase / Hydroxypyruvate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D SAMEA4384339_0507 gph; haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SAMEA4384339_0524 ppaX; phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SAMEA4384339_1193 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMEA4384339_1948 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMEA4384339_1427 gcvPA; glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SAMEA4384339_1426 gcvPB; glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SAMEA4384339_1428 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0763 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SAMEA4384339_2254 glxK_2; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SAMEA4384339_0688 glxK_1; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SAMEA4384339_0125 NAD-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D SAMEA4384339_2138 Formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
C 00640 Propanoate metabolism [PATH:ssim00640]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_0172 ctfA; putative acetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D SAMEA4384339_1593 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMEA4384339_0536 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMEA4384339_1409 bfmBAA; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMEA4384339_1408 bfmBAB; Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMEA4384339_1407 bmfBB; Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0163 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SAMEA4384339_2207 yhfP; quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SAMEA4384339_1582 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1419 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1494 accB_2; Biotin carboxyl carrier protein; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1418 cfiB_2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1493 accC; putative biotin carboxylase subunit of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1583 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_2402 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SAMEA4384339_1131 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMEA4384339_1132 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMEA4384339_2400 ldh2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0193 lctE; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:ssim00650]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_0169 Enoyl-CoA hydratase / Enoyl-CoA hydratase [valine degradation] / 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SAMEA4384339_1053 sdhA_1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMEA4384339_1054 frdB; succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMEA4384339_1052 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMEA4384339_2402 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SAMEA4384339_0163 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SAMEA4384339_1174 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1175 porB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_2348 mvaS; Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SAMEA4384339_1889 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMEA4384339_1890 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMEA4384339_2399 aldC; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SAMEA4384339_2245 gutB_5; zinc dependent dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D SAMEA4384339_0113 butA; (R,R)-butanediol dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
D SAMEA4384339_2285 lvr; short chain dehydrogenase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:ssim00660]
D SAMEA4384339_1889 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMEA4384339_1890 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMEA4384339_2399 aldC; Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SAMEA4384339_1131 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMEA4384339_1132 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMEA4384339_1894 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SAMEA4384339_1895 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SAMEA4384339_1893 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ssim00562]
D SAMEA4384339_1019 suhB_1; Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMEA4384339_2140 suhB_2; inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMEA4384339_0730 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ssim00190]
D SAMEA4384339_0796 yjlD; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SAMEA4384339_0799 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SAMEA4384339_1053 sdhA_1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMEA4384339_1054 frdB; succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMEA4384339_1052 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMEA4384339_1028 ctaB; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D SAMEA4384339_1027 ctaA; cytochrome oxidase assembly protein CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMEA4384339_0970 qoxD; quinol oxidase polypeptide IV QoxD K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D SAMEA4384339_0971 qoxC; quinol oxidase polypeptide III QoxC K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D SAMEA4384339_0972 qoxB; quinol oxidase polypeptide I QoxB K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D SAMEA4384339_0973 qoxA; quinol oxidase polypeptide II QoxA K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D SAMEA4384339_0998 appC; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SAMEA4384339_0999 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SAMEA4384339_1940 atpA; ATP synthase F0F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SAMEA4384339_1938 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SAMEA4384339_1939 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SAMEA4384339_1941 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SAMEA4384339_1937 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SAMEA4384339_1944 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMEA4384339_1942 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMEA4384339_1943 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SAMEA4384339_1840 ppaC; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ssim00710]
D SAMEA4384339_0729 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SAMEA4384339_0728 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMEA4384339_1570 gapA2; glyceraldehyde 3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_1960 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SAMEA4384339_2306 fbp; Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SAMEA4384339_1241 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SAMEA4384339_2167 rpi; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SAMEA4384339_0063 rpiB_1; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMEA4384339_0107 rpiB_2; ribose 5-phosphate isomerase B-like protein K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SAMEA4384339_0730 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMEA4384339_1108 cfxE; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMEA4384339_0106 alsE; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SAMEA4384339_1660 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SAMEA4384339_1668 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Other carbon fixation pathways [PATH:ssim00720]
D SAMEA4384339_1026 cfiB_1; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D SAMEA4384339_1738 citG; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SAMEA4384339_1053 sdhA_1; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SAMEA4384339_1054 frdB; succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SAMEA4384339_1052 sdhC; Succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SAMEA4384339_1132 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SAMEA4384339_1131 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_1174 2-oxoacid ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1175 porB; 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SAMEA4384339_1577 citC; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SAMEA4384339_1248 citB; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SAMEA4384339_1582 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1419 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1494 accB_2; Biotin carboxyl carrier protein; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1418 cfiB_2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1493 accC; putative biotin carboxylase subunit of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1583 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1615 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SAMEA4384339_0975 folD; Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SAMEA4384339_0536 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMEA4384339_1593 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ssim00680]
D SAMEA4384339_0125 NAD-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D SAMEA4384339_2138 Formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SAMEA4384339_1948 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMEA4384339_0732 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_1960 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SAMEA4384339_2306 fbp; Fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_0523 hxlB; sugar isomerase (SIS) K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D SAMEA4384339_0522 D-arabino-3-hexulose 6-phosphate formaldehyde lyase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D SAMEA4384339_1593 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SAMEA4384339_0536 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2251 pgm_2; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0331 cobC_1; truncated phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0731 pgm_1; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SAMEA4384339_1605 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:ssim00910]
D SAMEA4384339_2232 narG; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2231 narH; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2229 narI; Respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2235 nasD; Nitrite reductase [NAD(P)H] large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D SAMEA4384339_2234 nasE; Nitrite reductase [NAD(P)H] small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D SAMEA4384339_0779 putative enoyl-reductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SAMEA4384339_0816 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SAMEA4384339_1193 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMEA4384339_0390 gltB_1; glutamate synthase [NADPH] large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SAMEA4384339_0391 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SAMEA4384339_0074 arcC1; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SAMEA4384339_0266 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:ssim00920]
D SAMEA4384339_0289 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SAMEA4384339_1586 nrnA; Bifunctional oligoribonuclease and PAP phosphatase nrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SAMEA4384339_2426 cysJ; Sulfite reductase (NADPH) alpha subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SAMEA4384339_0652 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D SAMEA4384339_0473 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMEA4384339_0439 cysK; beta-cyano-L-alanine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SAMEA4384339_0014 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SAMEA4384339_0316 metI; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SAMEA4384339_0378 mccB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ssim00061]
D SAMEA4384339_1582 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1419 accB_1; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1494 accB_2; Biotin carboxyl carrier protein; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SAMEA4384339_1418 cfiB_2; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1493 accC; putative biotin carboxylase subunit of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SAMEA4384339_1583 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SAMEA4384339_1118 hmrB; Acyl carrier protein / HmrB protein involved in methicillin resistance K02078 acpP; acyl carrier protein
D SAMEA4384339_1116 fabD; Malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SAMEA4384339_0834 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SAMEA4384339_0835 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SAMEA4384339_1117 fabG_2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1164 fabG_3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_0174 fabG_1; short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1934 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SAMEA4384339_0860 fabI; enoyl-[acyl-carrier protein] reductase (NADPH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMEA4384339_0171 fadK; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ssim00071]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_0168 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SAMEA4384339_0169 Enoyl-CoA hydratase / Enoyl-CoA hydratase [valine degradation] / 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SAMEA4384339_0170 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SAMEA4384339_0171 fadK; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ssim00561]
D SAMEA4384339_2254 glxK_2; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SAMEA4384339_0688 glxK_1; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0061 dhaK_1; dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SAMEA4384339_0592 dhaK_2; putative dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SAMEA4384339_0062 dhaL_1; dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SAMEA4384339_0593 dhaL_2; dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SAMEA4384339_0594 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransfer protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SAMEA4384339_1184 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SAMEA4384339_1115 plsX; Fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SAMEA4384339_1251 plsY; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SAMEA4384339_1608 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SAMEA4384339_1817 dagK; Transcription regulator (contains diacylglycerol kinase catalytic domain) K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SAMEA4384339_2466 lipA_2; Lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D SAMEA4384339_0866 ugtP; diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis) K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SAMEA4384339_0664 ltaS; glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:ssim00564]
D SAMEA4384339_1369 gpsA; Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SAMEA4384339_1185 glpD; Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SAMEA4384339_1251 plsY; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SAMEA4384339_1608 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SAMEA4384339_0213 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D SAMEA4384339_1817 dagK; Transcription regulator (contains diacylglycerol kinase catalytic domain) K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SAMEA4384339_1647 ytpA; Lysophospholipase; Monoglyceride lipase; putative K01048 pldB; lysophospholipase [EC:3.1.1.5]
D SAMEA4384339_0950 glpQ; putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SAMEA4384339_1032 ugpQ_1; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SAMEA4384339_1602 ugpQ_2; glycerophosphoryl diester phosphodiesterase protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SAMEA4384339_1145 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SAMEA4384339_1167 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SAMEA4384339_1215 cls_1; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SAMEA4384339_1923 cls_2; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SAMEA4384339_1828 pcrB; geranylgeranylglyceryl diphosphate synthase K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D SAMEA4384339_0708 putative acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ssim00592]
D SAMEA4384339_0168 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ssim00230]
D SAMEA4384339_1389 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SAMEA4384339_1971 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_0426 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SAMEA4384339_0982 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SAMEA4384339_0986 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SAMEA4384339_0984 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SAMEA4384339_0981 purL; Phosphoribosylformylglycinamidine synthase, synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D SAMEA4384339_0979 yexA; phosphoribosylformylglycinamidine synthase PurS component K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D SAMEA4384339_0980 purQ; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMEA4384339_0983 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SAMEA4384339_0977 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SAMEA4384339_0976 purE; phosphoribosylaminoimidazole carboxylase PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SAMEA4384339_0978 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SAMEA4384339_1830 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SAMEA4384339_0985 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SAMEA4384339_1522 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SAMEA4384339_1974 deoD; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SAMEA4384339_1075 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SAMEA4384339_0436 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SAMEA4384339_0347 guaB; Inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SAMEA4384339_1364 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SAMEA4384339_1056 rdgB; Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SAMEA4384339_0345 xprT; Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SAMEA4384339_0348 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMEA4384339_1234 guaC; putative GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SAMEA4384339_1096 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SAMEA4384339_0677 nrdE2; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SAMEA4384339_0678 nrdF1; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SAMEA4384339_2422 nrdD; Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SAMEA4384339_0509 dgk; deoxynucleoside kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D SAMEA4384339_1521 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SAMEA4384339_0855 yjbM; GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SAMEA4384339_2301 ywaC; GTP pyrophosphokinase ywaC K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SAMEA4384339_0019 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SAMEA4384339_0508 dck; Deoxyadenosine kinase / Deoxyguanosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D SAMEA4384339_1173 putative metallo-phosphoesterase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SAMEA4384339_2058 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SAMEA4384339_0256 allB; putative allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D SAMEA4384339_0259 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SAMEA4384339_0237 pucG; putative soluble hydrogenase subunit K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D SAMEA4384339_0260 ylbA; Uncharacterized conserved protein, contains double-stranded beta-helix domain K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D SAMEA4384339_2118 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SAMEA4384339_2117 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SAMEA4384339_2116 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D SAMEA4384339_0261 allD_1; putative ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D SAMEA4384339_0262 allD_2; putative ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D SAMEA4384339_0074 arcC1; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SAMEA4384339_0266 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ssim00240]
D SAMEA4384339_1090 pyrAB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SAMEA4384339_1089 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SAMEA4384339_1087 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SAMEA4384339_1088 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SAMEA4384339_2389 pyrD; Dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SAMEA4384339_1092 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SAMEA4384339_1091 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SAMEA4384339_1142 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SAMEA4384339_1364 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SAMEA4384339_1962 ctrA; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SAMEA4384339_1372 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SAMEA4384339_1498 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SAMEA4384339_1947 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SAMEA4384339_1085 pyrR; Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SAMEA4384339_1173 putative metallo-phosphoesterase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SAMEA4384339_0251 psuG; Pseudouridine 5-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D SAMEA4384339_1972 pdp; Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SAMEA4384339_1459 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SAMEA4384339_0220 hutI_1; imidazolonepropionase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SAMEA4384339_2422 nrdD; Ribonucleotide reductase of class III (anaerobic), large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SAMEA4384339_0677 nrdE2; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SAMEA4384339_0678 nrdF1; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SAMEA4384339_0508 dck; Deoxyadenosine kinase / Deoxyguanosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D SAMEA4384339_1479 tadA_2; ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SAMEA4384339_0407 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SAMEA4384339_0920 dut; dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SAMEA4384339_1954 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SAMEA4384339_1327 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ssim00250]
D SAMEA4384339_1373 ansB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SAMEA4384339_1869 ramA; putative carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SAMEA4384339_1591 ald2; alanine dehydrogenase 2 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SAMEA4384339_0162 ald1; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SAMEA4384339_0818 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SAMEA4384339_0817 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SAMEA4384339_0019 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SAMEA4384339_1830 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SAMEA4384339_1087 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SAMEA4384339_2402 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SAMEA4384339_0390 gltB_1; glutamate synthase [NADPH] large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SAMEA4384339_0391 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SAMEA4384339_0816 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SAMEA4384339_2358 rocA; Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SAMEA4384339_1193 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMEA4384339_1090 pyrAB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SAMEA4384339_1089 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SAMEA4384339_0980 purQ; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMEA4384339_1987 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SAMEA4384339_0982 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ssim00260]
D SAMEA4384339_1224 lysC2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1292 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1293 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMEA4384339_1225 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SAMEA4384339_1227 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SAMEA4384339_1226 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SAMEA4384339_1213 ltaE; Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SAMEA4384339_1948 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMEA4384339_2254 glxK_2; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SAMEA4384339_0688 glxK_1; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SAMEA4384339_2251 pgm_2; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0331 cobC_1; truncated phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0731 pgm_1; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SAMEA4384339_1605 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SAMEA4384339_0495 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SAMEA4384339_1427 gcvPA; glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SAMEA4384339_1426 gcvPB; glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SAMEA4384339_1428 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0763 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SAMEA4384339_2417 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D SAMEA4384339_2418 gbsA; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D SAMEA4384339_0378 mccB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SAMEA4384339_2331 sdhA_2; L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SAMEA4384339_2332 sdhB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SAMEA4384339_1896 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMEA4384339_0161 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMEA4384339_1272 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SAMEA4384339_1271 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ssim00270]
D SAMEA4384339_0473 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SAMEA4384339_0439 cysK; beta-cyano-L-alanine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SAMEA4384339_0378 mccB; cystathionine beta-lyase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SAMEA4384339_0315 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SAMEA4384339_0377 mccA; cysteine synthase K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D SAMEA4384339_0314 metH; 5,10-methylenetetrahydrofolate reductase-like homocysteine-binding domain protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SAMEA4384339_0313 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SAMEA4384339_1666 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SAMEA4384339_1489 mtnN; 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SAMEA4384339_1075 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SAMEA4384339_2366 dapL; aspartate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D SAMEA4384339_1600 msrC; GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SAMEA4384339_1969 luxS; S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SAMEA4384339_1224 lysC2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1292 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1293 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMEA4384339_1225 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SAMEA4384339_0014 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SAMEA4384339_0316 metI; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SAMEA4384339_0506 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMEA4384339_2400 ldh2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0193 lctE; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_2331 sdhA_2; L-serine dehydratase, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SAMEA4384339_2332 sdhB; L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SAMEA4384339_1605 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:ssim00280]
D SAMEA4384339_0506 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMEA4384339_1409 bfmBAA; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMEA4384339_1408 bfmBAB; Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMEA4384339_1407 bmfBB; Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0168 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_2348 mvaS; Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ssim00290]
D SAMEA4384339_1896 ilvA; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMEA4384339_0161 tdcB; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SAMEA4384339_1894 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SAMEA4384339_1895 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SAMEA4384339_1893 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SAMEA4384339_1889 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMEA4384339_1890 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMEA4384339_1891 ilvC; 2-dehydropantoate 2-reductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SAMEA4384339_1888 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SAMEA4384339_0506 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMEA4384339_1892 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ssim00300]
D SAMEA4384339_1225 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SAMEA4384339_1224 lysC2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1292 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1293 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMEA4384339_1294 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SAMEA4384339_1295 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SAMEA4384339_1634 Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SAMEA4384339_1299 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SAMEA4384339_1296 dapH; tetrahydrodipicolinate acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D SAMEA4384339_0961 patA; putative aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SAMEA4384339_1917 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ssim00310]
D SAMEA4384339_1312 odhB; dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0170 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_1633 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ssim00220]
D SAMEA4384339_2442 arcB; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SAMEA4384339_0075 argF; Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SAMEA4384339_0818 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SAMEA4384339_0817 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SAMEA4384339_1997 arg; arginase K01476 rocF; arginase [EC:3.5.3.1]
D SAMEA4384339_2118 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SAMEA4384339_2117 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SAMEA4384339_2116 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D SAMEA4384339_0078 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SAMEA4384339_1835 nos; nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D SAMEA4384339_0980 purQ; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMEA4384339_1193 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMEA4384339_1090 pyrAB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SAMEA4384339_1089 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SAMEA4384339_0074 arcC1; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SAMEA4384339_0266 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SAMEA4384339_0816 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SAMEA4384339_0131 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D SAMEA4384339_0130 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SAMEA4384339_0132 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
C 00330 Arginine and proline metabolism [PATH:ssim00330]
D SAMEA4384339_0220 hutI_1; imidazolonepropionase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_1835 nos; nitric-oxide synthase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D SAMEA4384339_1997 arg; arginase K01476 rocF; arginase [EC:3.5.3.1]
D SAMEA4384339_0815 rocD2_2; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D SAMEA4384339_0133 rocD2_1; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D SAMEA4384339_1393 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SAMEA4384339_1648 fadM; Proline dehydrogenase (Proline oxidase) K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D SAMEA4384339_2358 rocA; Delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SAMEA4384339_1633 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:ssim00340]
D SAMEA4384339_2474 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SAMEA4384339_2467 hisI; Phosphoribosyl-AMP cyclohydrolase / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D SAMEA4384339_2469 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SAMEA4384339_2470 hisH; Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SAMEA4384339_2468 hisF; Imidazole glycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SAMEA4384339_2471 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SAMEA4384339_2472 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0670 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_2473 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SAMEA4384339_0008 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SAMEA4384339_2163 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D SAMEA4384339_2162 hutI_2; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D SAMEA4384339_2165 hutG; Formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ssim00350]
D SAMEA4384339_2472 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0670 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:ssim00360]
D SAMEA4384339_2472 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0670 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_1633 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00380 Tryptophan metabolism [PATH:ssim00380]
D SAMEA4384339_1312 odhB; dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_0170 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_1231 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ssim00400]
D SAMEA4384339_1620 aroA_2; Chorismate mutase I / 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta, AroH/AroA I beta K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D SAMEA4384339_1362 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SAMEA4384339_0759 aroC_1; 3-dehydroquinate dehydratase I AroC I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SAMEA4384339_1486 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SAMEA4384339_1361 aroA_1; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SAMEA4384339_1363 aroC_2; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SAMEA4384339_1266 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SAMEA4384339_1267 pabA_2; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SAMEA4384339_1268 trpD2; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SAMEA4384339_1270 trpF; N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SAMEA4384339_1269 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SAMEA4384339_1272 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SAMEA4384339_1271 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SAMEA4384339_1530 ACT domain-containing protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D SAMEA4384339_1262 tyrC; Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SAMEA4384339_1836 pheA; ACT domain protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SAMEA4384339_2472 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0670 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ssim00410]
D SAMEA4384339_2394 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SAMEA4384339_2402 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_2395 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ssim00430]
D SAMEA4384339_0149 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMEA4384339_1591 ald2; alanine dehydrogenase 2 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SAMEA4384339_0162 ald1; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SAMEA4384339_0816 gluD; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SAMEA4384339_0536 pta; Phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SAMEA4384339_1593 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ssim00450]
D SAMEA4384339_0316 metI; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SAMEA4384339_0315 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SAMEA4384339_0314 metH; 5,10-methylenetetrahydrofolate reductase-like homocysteine-binding domain protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SAMEA4384339_0313 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SAMEA4384339_0774 csd; Selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SAMEA4384339_0710 trxB_1; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SAMEA4384339_0415 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ssim00460]
D SAMEA4384339_0149 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMEA4384339_1373 ansB; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SAMEA4384339_1948 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ssim00470]
D SAMEA4384339_1298 alr2; Diaminopimelate epimerase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMEA4384339_1911 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMEA4384339_1633 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMEA4384339_1918 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMEA4384339_0790 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SAMEA4384339_0792 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SAMEA4384339_0980 purQ; Phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SAMEA4384339_1055 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SAMEA4384339_1071 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SAMEA4384339_1299 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SAMEA4384339_2023 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:ssim00480]
D SAMEA4384339_0149 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMEA4384339_1492 lactam utilisation protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D SAMEA4384339_0800 pepA_1; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMEA4384339_1577 citC; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SAMEA4384339_1402 gnd_2; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SAMEA4384339_1395 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SAMEA4384339_1189 bsaA_1; Glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SAMEA4384339_2427 bsaA_2; Glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D SAMEA4384339_0964 atl_1; autolysin K13714 atl; bifunctional autolysin [EC:3.5.1.28 3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ssim00542]
D SAMEA4384339_0693 llm; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ssim00541]
D SAMEA4384339_2296 gtaB_2; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0178 gtaB_1; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_0208 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SAMEA4384339_1979 gmuF; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMEA4384339_0141 yvyI; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SAMEA4384339_0425 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SAMEA4384339_1946 mnaA; UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:ssim00550]
D SAMEA4384339_1935 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMEA4384339_1959 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMEA4384339_0684 murB; putative UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SAMEA4384339_1623 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SAMEA4384339_1071 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SAMEA4384339_1918 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMEA4384339_1917 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SAMEA4384339_1460 dgkA; Diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SAMEA4384339_1144 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SAMEA4384339_0627 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMEA4384339_1317 type 2 phosphatidic acid phosphatase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMEA4384339_1070 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SAMEA4384339_1318 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SAMEA4384339_1347 ponA; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMEA4384339_0158 dacA_1; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMEA4384339_0584 dacA_2; D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein PBP4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMEA4384339_0156 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SAMEA4384339_0867 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SAMEA4384339_1811 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SAMEA4384339_1810 CobB/CobQ-like glutamine amidotransferase domain-containing protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SAMEA4384339_2091 fmhB; FmhB protein of FemAB family involved in peptidoglycan interpeptide biosynthesis K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16]
D SAMEA4384339_1273 femA_1; UDP-N-acetylmuramoylpentapeptide-glycine glycyltransferase K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17]
D SAMEA4384339_1274 femB; femB protein K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18]
D SAMEA4384339_1614 sgtA; Multimodular transpeptidase-transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMEA4384339_1793 mgt; monofunctional biosynthetic peptidoglycan transglycosylase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMEA4384339_1069 ftsI_1; Cell division protein FtsI (Peptidoglycan synthetase) K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D SAMEA4384339_1443 ftsI_2; Cell division protein FtsI [Peptidoglycan synthetase] / Transpeptidase, Penicillin binding protein transpeptidase domain, Penicillin-binding protein 3 K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D SAMEA4384339_2322 femA_3; epr protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
C 00552 Teichoic acid biosynthesis [PATH:ssim00552]
D SAMEA4384339_0627 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMEA4384339_1317 type 2 phosphatidic acid phosphatase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMEA4384339_0693 llm; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SAMEA4384339_0579 tagA; N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SAMEA4384339_0582 tagF_5; CDP-glycerol: N-acetyl-beta-D-mannosaminyl-1,4-N-acetyl-D-glucosaminyldiphosphoUDP glycerophosphotransferase K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D SAMEA4384339_0182 tagF2_1; putative teichoic acid biosynthesis protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SAMEA4384339_0183 tagF2_2; putative teichoic acid biosynthesis protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SAMEA4384339_0214 tagF_3; teichoic acid biosynthesis protein F K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SAMEA4384339_0211 tagE_2; poly (glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SAMEA4384339_0513 tagE_3; putative glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SAMEA4384339_0514 tagE_4; Poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SAMEA4384339_0790 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SAMEA4384339_0792 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SAMEA4384339_0791 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SAMEA4384339_0793 dltD; putative lipoteichoic acid biosynthesis protein K03740 dltD; D-alanine transfer protein
D SAMEA4384339_0967 ywtF; transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SAMEA4384339_1259 msrR; Peptide methionine sulfoxide reductase regulator MsrR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SAMEA4384339_2139 lytR_2; cell envelope transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SAMEA4384339_0090 tagF_1; Putative polyribitolphosphotransferase K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D SAMEA4384339_0215 tagF_4; putative teichoic acid biosynthesis protein K21591 tarF; teichoic acid glycerol-phosphate transferase [EC:2.7.8.45]
D SAMEA4384339_0209 tagE_1; poly (glycerol-phosphate) alpha-glucosyltransferase K22710 tarM; poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase [EC:2.4.1.70]
D SAMEA4384339_0866 ugtP; diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis) K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SAMEA4384339_0664 ltaS; glycerol phosphate lipoteichoic acid synthase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SAMEA4384339_0648 yfdH; putative glucosyl transferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D SAMEA4384339_1128 integral membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ssim00543]
D SAMEA4384339_0693 llm; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SAMEA4384339_2462 icaA; Polysaccharide intercellular adhesin (PIA) biosynthesis N-glycosyltransferase IcaA K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D SAMEA4384339_2463 icaD; Polysaccharide intercellular adhesin (PIA) biosynthesis protein IcaD K21461 icaD; poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein
D SAMEA4384339_0473 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ssim00730]
D SAMEA4384339_1928 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SAMEA4384339_1510 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1598 iscS_2; Selenocysteine lyase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1597 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SAMEA4384339_1927 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SAMEA4384339_1926 thiE; Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SAMEA4384339_1107 engC; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SAMEA4384339_1109 thiN; thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SAMEA4384339_2058 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SAMEA4384339_1929 tenA; Transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:ssim00740]
D SAMEA4384339_1650 ribBA; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SAMEA4384339_1652 ribD_2; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SAMEA4384339_0829 yidA_1; hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SAMEA4384339_1649 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SAMEA4384339_1651 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SAMEA4384339_1156 ribC; Riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SAMEA4384339_0289 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SAMEA4384339_0337 nfrA; Chromate reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D SAMEA4384339_1927 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SAMEA4384339_1389 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ssim00750]
D SAMEA4384339_0526 pdxK; Phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SAMEA4384339_1226 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SAMEA4384339_0461 pdxS; Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D SAMEA4384339_0462 pdxT; pyridoxine biosynthesis amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ssim00760]
D SAMEA4384339_1834 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SAMEA4384339_1974 deoD; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SAMEA4384339_1484 nadD; Nicotinate-nucleotide adenylyltransferase; bacterial NadD family K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SAMEA4384339_1833 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SAMEA4384339_2043 cobB; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SAMEA4384339_0856 ppnK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:ssim00770]
D SAMEA4384339_1889 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SAMEA4384339_1890 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SAMEA4384339_1891 ilvC; 2-dehydropantoate 2-reductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SAMEA4384339_1888 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SAMEA4384339_2396 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SAMEA4384339_2266 panE_1; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SAMEA4384339_2397 panE_2; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SAMEA4384339_2395 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SAMEA4384339_1965 coaW; Pantothenate kinase type II, eukaryotic K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D SAMEA4384339_1098 coaBC; phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SAMEA4384339_1036 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SAMEA4384339_1571 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SAMEA4384339_1912 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SAMEA4384339_0506 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMEA4384339_2394 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ssim00780]
D SAMEA4384339_0835 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SAMEA4384339_1117 fabG_2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1164 fabG_3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_0174 fabG_1; short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1934 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SAMEA4384339_0860 fabI; enoyl-[acyl-carrier protein] reductase (NADPH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMEA4384339_1353 birA; Biotin-protein ligase / Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ssim00785]
D SAMEA4384339_1424 lipM; Lipoate-protein ligase A K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SAMEA4384339_0783 lipA_1; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SAMEA4384339_0537 lipL; Lipoate-protein ligase A K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D SAMEA4384339_0878 lplJ_2; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SAMEA4384339_0276 lplJ_1; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1005 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SAMEA4384339_1006 pdhB; Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SAMEA4384339_1007 pdhC; branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SAMEA4384339_1313 odhA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SAMEA4384339_1312 odhB; dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SAMEA4384339_1409 bfmBAA; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SAMEA4384339_1408 bfmBAB; Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SAMEA4384339_1407 bmfBB; Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SAMEA4384339_1427 gcvPA; glycine dehydrogenase K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SAMEA4384339_1426 gcvPB; glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SAMEA4384339_1428 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMEA4384339_0763 gcvH_2; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ssim00790]
D SAMEA4384339_0518 folE2; GTP cyclohydrolase I type 2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D SAMEA4384339_0441 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SAMEA4384339_0442 folK; putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SAMEA4384339_0440 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SAMEA4384339_1326 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SAMEA4384339_1544 folC; Dihydrofolate synthase / Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SAMEA4384339_1650 ribBA; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SAMEA4384339_0658 pabA_1; anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D SAMEA4384339_0659 pabB; Para-aminobenzoate synthetase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SAMEA4384339_0660 putative para-aminobenzoate synthetase component K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SAMEA4384339_0190 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SAMEA4384339_0656 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SAMEA4384339_0655 queE; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SAMEA4384339_0657 queC; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SAMEA4384339_0674 queF; NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SAMEA4384339_2097 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SAMEA4384339_2103 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SAMEA4384339_2100 moaE; Molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SAMEA4384339_2104 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SAMEA4384339_2102 moeA; Molybdopterin biosynthesis protein A K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SAMEA4384339_2098 mobA; molybdopterin-guanine dinucleotide biosynthesis mobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ssim00670]
D SAMEA4384339_1326 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SAMEA4384339_1615 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SAMEA4384339_0975 folD; Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SAMEA4384339_1948 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SAMEA4384339_0984 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SAMEA4384339_0985 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SAMEA4384339_1102 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SAMEA4384339_1428 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SAMEA4384339_0314 metH; 5,10-methylenetetrahydrofolate reductase-like homocysteine-binding domain protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SAMEA4384339_1327 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SAMEA4384339_1441 yqgN; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ssim00860]
D SAMEA4384339_1554 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SAMEA4384339_1549 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SAMEA4384339_1783 gsaB; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SAMEA4384339_1550 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SAMEA4384339_1552 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SAMEA4384339_1551 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SAMEA4384339_1721 hemE; Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SAMEA4384339_1719 hemY; Protoporphyrinogen IX oxidase, aerobic K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D SAMEA4384339_1720 hemH; Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SAMEA4384339_0535 chlorite dismutase K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D SAMEA4384339_2233 nasF; Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SAMEA4384339_2425 sirC; precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D SAMEA4384339_1028 ctaB; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D SAMEA4384339_1027 ctaA; cytochrome oxidase assembly protein CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ssim00130]
D SAMEA4384339_1366 ubiF; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SAMEA4384339_0957 entC; putative chorismate binding enzyme K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D SAMEA4384339_0958 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexen e-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D SAMEA4384339_0959 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D SAMEA4384339_1672 menC; O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D SAMEA4384339_1673 menE; O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D SAMEA4384339_0960 menB; Naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D SAMEA4384339_0802 ydiI; thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SAMEA4384339_0956 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SAMEA4384339_0142 kefF_1; flavodoxin-like fold domain protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SAMEA4384339_0545 kefF_2; NAD(P)H quinone oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ssim00900]
D SAMEA4384339_0421 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_2348 mvaS; Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SAMEA4384339_2347 mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SAMEA4384339_0538 mvaK1; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SAMEA4384339_0540 mvaK2; Phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SAMEA4384339_0539 mvaD; Diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SAMEA4384339_2180 fni; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SAMEA4384339_1413 ispA; Geranyltranstransferase (farnesyldiphosphate synthase) K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SAMEA4384339_1367 heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D SAMEA4384339_1365 hepT; Farnesyl pyrophosphate synthetase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D SAMEA4384339_1144 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ssim00906]
D SAMEA4384339_2368 crtM; squalene/phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D SAMEA4384339_2367 crtN; Dehydrosqualene desaturase (Diapophytoene desaturase) (4,4-diapophytoene desaturase) K10209 crtN; 4,4'-diapophytoene desaturase [EC:1.3.8.2]
D SAMEA4384339_2370 crtP; Phytoene desaturase, neurosporene or lycopene producing / 4,4-diapolycopene oxidase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
D SAMEA4384339_1841 aldH; Aldehyde dehydrogenase K25072 crtNc; 4,4'-diapolycopenoate synthase [EC:1.2.99.10]
D SAMEA4384339_2369 crtQ; Hpnb K10211 crtQ; 4,4'-diaponeurosporenoate glycosyltransferase [EC:2.4.1.-]
D SAMEA4384339_2371 Glycosyl-4,4-diaponeurosporenoate acyltransferase precursor K10212 K10212; glycosyl-4,4'-diaponeurosporenoate acyltransferase [EC:2.3.1.-]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:ssim00907]
D SAMEA4384339_0168 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SAMEA4384339_1241 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D SAMEA4384339_0957 entC; putative chorismate binding enzyme K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SAMEA4384339_0239 yxeI; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ssim00261]
D SAMEA4384339_1224 lysC2; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1292 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SAMEA4384339_1293 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SAMEA4384339_1294 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SAMEA4384339_1295 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ssim00521]
D SAMEA4384339_1438 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SAMEA4384339_0210 pgcA_2; phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SAMEA4384339_1019 suhB_1; Myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SAMEA4384339_2140 suhB_2; inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SAMEA4384339_1438 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:ssim00401]
D SAMEA4384339_1262 tyrC; Arogenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SAMEA4384339_2472 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0670 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SAMEA4384339_1266 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SAMEA4384339_1267 pabA_2; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SAMEA4384339_1116 fabD; Malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SAMEA4384339_1117 fabG_2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1164 fabG_3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_0174 fabG_1; short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_0860 fabI; enoyl-[acyl-carrier protein] reductase (NADPH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SAMEA4384339_1118 hmrB; Acyl carrier protein / HmrB protein involved in methicillin resistance K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ssim00999]
D SAMEA4384339_1666 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SAMEA4384339_1486 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ssim00997]
D SAMEA4384339_2023 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
D SAMEA4384339_2026 iucC_2; Siderophore biosynthesis protein K23446 sfnaD; D-ornithine---citrate ligase [EC:6.3.2.58]
D SAMEA4384339_2024 iucC_1; Siderophore biosynthesis protein K23447 sfnaB; staphyloferrin A synthase [EC:6.3.2.57]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ssim00362]
D SAMEA4384339_0168 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SAMEA4384339_1082 catE_1; ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_2313 catE_2; Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_1260 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SAMEA4384339_0169 Enoyl-CoA hydratase / Enoyl-CoA hydratase [valine degradation] / 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SAMEA4384339_0170 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D SAMEA4384339_1303 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ssim00625]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SAMEA4384339_1957 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SAMEA4384339_0117 aldA; Aldehyde dehydrogenase B K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D SAMEA4384339_1082 catE_1; ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_2313 catE_2; Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:ssim00622]
D SAMEA4384339_1082 catE_1; ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_2313 catE_2; Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_1260 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D SAMEA4384339_0168 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ssim00643]
D SAMEA4384339_1082 catE_1; ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_2313 catE_2; Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SAMEA4384339_0172 ctfA; putative acetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D SAMEA4384339_2118 ureC; Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SAMEA4384339_2117 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SAMEA4384339_2116 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D SAMEA4384339_1260 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ssim00626]
D SAMEA4384339_0115 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ssim03020]
D SAMEA4384339_0487 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SAMEA4384339_0488 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SAMEA4384339_2053 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SAMEA4384339_1097 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SAMEA4384339_1963 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ssim03010]
D SAMEA4384339_1371 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SAMEA4384339_1140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SAMEA4384339_2073 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SAMEA4384339_1601 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SAMEA4384339_2062 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SAMEA4384339_0323 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SAMEA4384339_0491 rpsG; 30S ribosomalprotein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SAMEA4384339_2065 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SAMEA4384339_2044 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SAMEA4384339_2080 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SAMEA4384339_2054 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SAMEA4384339_0490 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SAMEA4384339_2055 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SAMEA4384339_1233 rpsN_1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SAMEA4384339_2066 rpsN_2; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SAMEA4384339_1157 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SAMEA4384339_1124 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SAMEA4384339_2070 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SAMEA4384339_0325 rpsR; 30S ribosomalprotein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SAMEA4384339_2075 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SAMEA4384339_1476 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SAMEA4384339_1466 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SAMEA4384339_0482 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SAMEA4384339_2076 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SAMEA4384339_2079 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SAMEA4384339_2078 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SAMEA4384339_2067 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SAMEA4384339_2064 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SAMEA4384339_0485 rplL; 50S ribosomalprotein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SAMEA4384339_0017 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SAMEA4384339_0484 rplJ; 50S ribosomalprotein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SAMEA4384339_0481 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SAMEA4384339_2045 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SAMEA4384339_2069 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SAMEA4384339_2060 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SAMEA4384339_2072 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SAMEA4384339_2052 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SAMEA4384339_2063 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SAMEA4384339_1127 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SAMEA4384339_1560 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SAMEA4384339_1534 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SAMEA4384339_2074 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SAMEA4384339_2077 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SAMEA4384339_2068 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SAMEA4384339_0427 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SAMEA4384339_1532 rpmA; 50S ribosomal protein L25 K02899 RP-L27; large subunit ribosomal protein L27
D SAMEA4384339_1110 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SAMEA4384339_2071 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SAMEA4384339_2061 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SAMEA4384339_1955 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D SAMEA4384339_1039 rpmF; 50S ribosomalprotein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SAMEA4384339_1232 rpmG2; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SAMEA4384339_1442 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SAMEA4384339_2517 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SAMEA4384339_1561 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SAMEA4384339_2056 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SAMEA4384339_0489 rplGB; 50S ribosomal protein L7AE K07590 RP-L7A; large subunit ribosomal protein L7A
D SAMEA4384339_0403 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0457 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_1779 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_1900 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0453 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_2006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0404 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_1776 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_2005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0458 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_1899 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0444 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_1775 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_1898 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0405 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0456 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0459 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_2004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ssim00970]
D SAMEA4384339_0452 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMEA4384339_1766 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMEA4384339_1777 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMEA4384339_0450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_1768 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_1060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_0720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_0881 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMEA4384339_1712 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMEA4384339_2003 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMEA4384339_0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1716 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1759 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1762 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1752 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SAMEA4384339_1753 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMEA4384339_1999 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMEA4384339_0020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMEA4384339_1711 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMEA4384339_2002 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMEA4384339_0448 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1713 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1901 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1751 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1749 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1754 tRNA-His K14226 tRNA-His; tRNA His
D SAMEA4384339_1714 tRNA-His K14226 tRNA-His; tRNA His
D SAMEA4384339_0454 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMEA4384339_1778 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMEA4384339_1902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_1771 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_0449 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_1769 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_1748 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_0447 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMEA4384339_1772 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMEA4384339_1998 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMEA4384339_1717 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1760 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1765 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1764 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1715 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SAMEA4384339_1758 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SAMEA4384339_0451 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMEA4384339_1767 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMEA4384339_0882 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_0392 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_1761 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_1763 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_1710 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_0446 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMEA4384339_1757 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMEA4384339_1773 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMEA4384339_1755 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SAMEA4384339_1756 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SAMEA4384339_2000 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SAMEA4384339_0445 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMEA4384339_1774 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMEA4384339_2001 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMEA4384339_0471 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SAMEA4384339_1819 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SAMEA4384339_1818 gatB_2; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SAMEA4384339_1820 gatC_3; Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SAMEA4384339_1505 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SAMEA4384339_1517 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMEA4384339_1351 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SAMEA4384339_1456 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SAMEA4384339_1565 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SAMEA4384339_0010 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SAMEA4384339_0474 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SAMEA4384339_0415 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SAMEA4384339_1102 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SAMEA4384339_1545 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SAMEA4384339_1641 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMEA4384339_1081 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SAMEA4384339_0443 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SAMEA4384339_0551 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMEA4384339_1147 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SAMEA4384339_1518 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SAMEA4384339_1042 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SAMEA4384339_1043 pheT_1; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SAMEA4384339_1612 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMEA4384339_0844 trpS; Tryptophanyl-tRNA synthetase; proteobacterial type K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ssim03060]
D SAMEA4384339_2059 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SAMEA4384339_0479 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SAMEA4384339_0734 protein translocase subunit K03075 secG; preprotein translocase subunit SecG
D SAMEA4384339_1524 secD; Protein-export membrane protein secD / Protein-export membrane protein secF K12257 secDF; SecD/SecF fusion protein
D SAMEA4384339_1525 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SAMEA4384339_1925 oxaI; OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMEA4384339_0699 secA1; protein export cytoplasm protein SecA ATPaseRNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMEA4384339_1123 ffh; Signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SAMEA4384339_1121 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SAMEA4384339_0299 tatAy; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D SAMEA4384339_0298 tatC2; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D SAMEA4384339_0822 spsA; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMEA4384339_0823 spsB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMEA4384339_1083 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ssim04122]
D SAMEA4384339_1510 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1598 iscS_2; Selenocysteine lyase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1509 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SAMEA4384339_2100 moaE; Molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SAMEA4384339_2097 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SAMEA4384339_2099 moaD; Molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D SAMEA4384339_2105 moeB; Molybdopterin biosynthesis MoeB protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SAMEA4384339_2103 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SAMEA4384339_2104 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SAMEA4384339_1597 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ssim03018]
D SAMEA4384339_0732 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMEA4384339_0736 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SAMEA4384339_1916 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SAMEA4384339_1376 recQ_2; DEAD/DEAH box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMEA4384339_0666 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMEA4384339_1956 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SAMEA4384339_1170 rny; Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SAMEA4384339_1001 hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SAMEA4384339_1159 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_1471 dnaK; DnaK protein K04043 dnaK; molecular chaperone DnaK
D SAMEA4384339_1864 groL; heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMEA4384339_1188 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ssim03030]
D SAMEA4384339_1813 polC_2; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMEA4384339_1585 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMEA4384339_1148 polC_1; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SAMEA4384339_0400 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMEA4384339_0409 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMEA4384339_1477 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMEA4384339_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMEA4384339_0018 dnaC_1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SAMEA4384339_1453 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SAMEA4384339_0899 ssb_2; single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1932 ssbB; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0324 ssb_1; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1332 rnhA; cell wall enzyme EbsB K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SAMEA4384339_1130 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SAMEA4384339_1045 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SAMEA4384339_1573 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMEA4384339_1826 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ssim03410]
D SAMEA4384339_1349 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SAMEA4384339_0527 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMEA4384339_1787 mutY; HhH-GPD superfamily base excision DNA repair protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SAMEA4384339_2175 DNA-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SAMEA4384339_1572 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SAMEA4384339_2277 alkA; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SAMEA4384339_1547 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SAMEA4384339_1448 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SAMEA4384339_1573 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMEA4384339_1523 recJ; putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMEA4384339_1826 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ssim03420]
D SAMEA4384339_0429 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SAMEA4384339_0705 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SAMEA4384339_0704 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SAMEA4384339_1051 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SAMEA4384339_1827 pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SAMEA4384339_1573 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMEA4384339_1826 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ssim03430]
D SAMEA4384339_1180 mutS_1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SAMEA4384339_1049 mutS2; Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SAMEA4384339_1181 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SAMEA4384339_1827 pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SAMEA4384339_1415 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SAMEA4384339_1414 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SAMEA4384339_1523 recJ; putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMEA4384339_0899 ssb_2; single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1932 ssbB; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0324 ssb_1; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1585 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMEA4384339_1148 polC_1; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SAMEA4384339_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMEA4384339_0400 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMEA4384339_1477 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMEA4384339_0409 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMEA4384339_1813 polC_2; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMEA4384339_1826 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ssim03440]
D SAMEA4384339_1523 recJ; putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMEA4384339_0899 ssb_2; single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1932 ssbB; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0324 ssb_1; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0004 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SAMEA4384339_1457 recO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SAMEA4384339_0402 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D SAMEA4384339_1169 recA; recombinase A K03553 recA; recombination protein RecA
D SAMEA4384339_1573 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMEA4384339_1529 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D SAMEA4384339_1528 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SAMEA4384339_1113 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SAMEA4384339_0051 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SAMEA4384339_1507 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SAMEA4384339_1585 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMEA4384339_1148 polC_1; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SAMEA4384339_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMEA4384339_0400 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMEA4384339_1477 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMEA4384339_0409 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMEA4384339_1813 polC_2; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMEA4384339_1099 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ssim02010]
D SAMEA4384339_2108 modA; Molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D SAMEA4384339_2107 modB; Molybdenum transport system permease protein modB K02018 modB; molybdate transport system permease protein
D SAMEA4384339_2106 modC; Molybdenum transport ATP-binding protein modC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SAMEA4384339_1014 potD; ABC transporter, periplasmic spermidine putrescine-binding protein potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SAMEA4384339_1013 ydcV; PotC K11070 potC; spermidine/putrescine transport system permease protein
D SAMEA4384339_1012 potB; Spermidine Putrescine ABC transporter permease component potB K11071 potB; spermidine/putrescine transport system permease protein
D SAMEA4384339_1011 potA; Spermidine Putrescine transport ATP-binding protein potA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SAMEA4384339_2269 opuCC_2; Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D SAMEA4384339_0668 opuCC_1; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB K05845 opuC; osmoprotectant transport system substrate-binding protein
D SAMEA4384339_2268 yehW; putative glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SAMEA4384339_2270 opuCB; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D SAMEA4384339_2271 proV_2; glycine betaine/carnitine/choline ABC transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SAMEA4384339_0667 proV_1; Glycine betaine ABC transport system, ATP-binding protein OpuAA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SAMEA4384339_1287 pstS; phosphate-binding lipoprotein K02040 pstS; phosphate transport system substrate-binding protein
D SAMEA4384339_1286 pstC; PstC K02037 pstC; phosphate transport system permease protein
D SAMEA4384339_1285 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D SAMEA4384339_1284 pstB3; PstB protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SAMEA4384339_2248 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SAMEA4384339_2247 tcyB; cystine transport system permease protein K10009 tcyB; L-cystine transport system permease protein
D SAMEA4384339_2246 tcyC_2; amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SAMEA4384339_1746 artQ; extracellular glutamine-binding protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D SAMEA4384339_1745 glnQ_1; Glutamine transport ATP-binding protein glnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SAMEA4384339_0768 metQ_2; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SAMEA4384339_2403 metQ_3; putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SAMEA4384339_0382 metQ_1; ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SAMEA4384339_0767 metP_2; putative ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SAMEA4384339_0381 metP_1; methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SAMEA4384339_0766 metN2; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SAMEA4384339_0380 metN; Methionine import ATP-binding protein metN 1 K02071 metN; D-methionine transport system ATP-binding protein
D SAMEA4384339_0841 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SAMEA4384339_0837 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SAMEA4384339_0838 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SAMEA4384339_0839 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0840 oppF_2; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SAMEA4384339_2019 yhfQ_2; iron(III) dicitrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D SAMEA4384339_2022 yhfQ_3; iron(III) dicitrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D SAMEA4384339_2017 htsC_1; Heme ABC type transporter HtsABC, permease protein HtsC K23182 fecD; ferric citrate transport system permease protein
D SAMEA4384339_2020 htsC_2; Heme ABC type transporter HtsABC, permease protein HtsC K23182 fecD; ferric citrate transport system permease protein
D SAMEA4384339_2018 yfiZ; ferrichrome ABC transporter K23183 fecC; ferric citrate transport system permease protein
D SAMEA4384339_2021 htsB; Heme ABC type transporter HtsABC, permease protein HtsB K23183 fecC; ferric citrate transport system permease protein
D SAMEA4384339_0279 psaA_1; manganese ABC transporter periplasmic-binding protein SitA K19975 mntC; manganese transport system substrate-binding protein
D SAMEA4384339_0574 psaA_2; ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein
D SAMEA4384339_0278 mntB; manganese ABC transporter inner membrane permease SitD K19976 mntB; manganese transport system permease protein
D SAMEA4384339_0575 sitD; Manganese ABC transporter, inner membrane permease protein SitD K19976 mntB; manganese transport system permease protein
D SAMEA4384339_0277 yusV_1; Mn2+/Zn2+ ABC transporter ATPase K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D SAMEA4384339_0576 sitB; Manganese ABC transporter, ATP-binding protein SitB K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D SAMEA4384339_2241 zinT; Zn-binding lipoprotein adcA-like protein K09815 znuA; zinc transport system substrate-binding protein
D SAMEA4384339_2311 adcA; adhesion lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SAMEA4384339_1446 znuB; ABC transporter permease K09816 znuB; zinc transport system permease protein
D SAMEA4384339_1447 znuC; ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SAMEA4384339_2111 bioY; biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D SAMEA4384339_0987 ykoC; transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for hydroxymethylPyrimidine K16785 ecfT; energy-coupling factor transport system permease protein
D SAMEA4384339_2048 ecfT; Transmembrane component of general energizing module of ECF transporters K16785 ecfT; energy-coupling factor transport system permease protein
D SAMEA4384339_2477 mtsC; Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D SAMEA4384339_2050 ecfA1_3; cobalt import ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SAMEA4384339_2049 ecfA1_2; ATPase component of general energizing module of ECF transporters K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SAMEA4384339_1789 tagG; Teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D SAMEA4384339_0581 teichoic acid ABC transporter permease protein K09692 tagG; teichoic acid transport system permease protein
D SAMEA4384339_1790 tagH_2; Teichoic acid export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SAMEA4384339_0580 tagH_1; TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SAMEA4384339_2196 Putative hemin transport system permease protein hrtB K09813 hrtB; hemin transport system permease protein
D SAMEA4384339_2195 hrtA; Heme efflux system ATPase HrtA K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D SAMEA4384339_2498 ABC transporter permease K11632 bceB; bacitracin transport system permease protein
D SAMEA4384339_2497 vraD; ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D SAMEA4384339_2433 ABC transporter permease protein K19084 braE; bacitracin transport system permease protein
D SAMEA4384339_2434 lolD_2; ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SAMEA4384339_0604 vraG; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SAMEA4384339_0603 macB_1; ABC transporter ATP-binding protein VraF K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SAMEA4384339_0585 bmrA; ABC transporter permease/ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SAMEA4384339_0629 cydC; Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SAMEA4384339_0628 cydD; Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:ssim02060]
D SAMEA4384339_0996 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SAMEA4384339_0995 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SAMEA4384339_2340 glcB; Pts system, glucose-specific iiabc component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_0140 ptsG; PTS system transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_1322 crr; PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SAMEA4384339_1607 ptaA; PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SAMEA4384339_2215 scrA; PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SAMEA4384339_0108 bglF_1; PTS system beta-glucoside-specific IIB component/PTS system beta-glucoside-specific IIC component/PTS system beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SAMEA4384339_0231 bglF_2; PTS system beta-glucoside-specific IIB component/PTS system beta-glucoside-specific IIC component/PTS system beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SAMEA4384339_2153 glvC; PTS system, arbutin-like IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D SAMEA4384339_0393 treB; PTS system trehalose-specific transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SAMEA4384339_1991 mtlF_2; PTS system mannitol-specific transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SAMEA4384339_1989 mtlF_1; PTS system, mannitol specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SAMEA4384339_2037 lacF; PTS system lactose-specific transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SAMEA4384339_2036 lacE; PTS system, lactose-specific IIBC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SAMEA4384339_0202 manP; PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SAMEA4384339_0203 gatB_1; PTS system galactitol-specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SAMEA4384339_0204 gatC_2; PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D SAMEA4384339_0104 gatC_1; PTS system, galactitol-specific IIC component K20114 gatC; galactose PTS system EIIC component
D SAMEA4384339_0644 fruA; PTS system fructose-specific transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SAMEA4384339_0643 fruB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:ssim03070]
D SAMEA4384339_1524 secD; Protein-export membrane protein secD / Protein-export membrane protein secF K12257 secDF; SecD/SecF fusion protein
D SAMEA4384339_0479 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SAMEA4384339_0734 protein translocase subunit K03075 secG; preprotein translocase subunit SecG
D SAMEA4384339_2059 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SAMEA4384339_1525 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SAMEA4384339_1925 oxaI; OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMEA4384339_0699 secA1; protein export cytoplasm protein SecA ATPaseRNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMEA4384339_1121 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SAMEA4384339_1123 ffh; Signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SAMEA4384339_0299 tatAy; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D SAMEA4384339_0298 tatC2; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ssim02020]
D SAMEA4384339_1575 phoR; Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SAMEA4384339_1576 phoP; Alkaline phosphatase synthesis transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SAMEA4384339_1287 pstS; phosphate-binding lipoprotein K02040 pstS; phosphate transport system substrate-binding protein
D SAMEA4384339_1609 degP; Serine protease, DegP/HtrA, do-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMEA4384339_1381 srrB; ResE K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D SAMEA4384339_1382 srrA; transcriptional regulator srrA K07775 resD; two-component system, OmpR family, response regulator ResD
D SAMEA4384339_1027 ctaA; cytochrome oxidase assembly protein CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMEA4384339_0024 walK; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SAMEA4384339_0023 vicR; Two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SAMEA4384339_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SAMEA4384339_0650 saeS; Sensor histidine protein kinase SaeS (exoprotein expression protein S) K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SAMEA4384339_0651 saeR; Response regulator SaeR K10682 saeR; two-component system, OmpR family, response regulator SaeR
D SAMEA4384339_2497 vraD; ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D SAMEA4384339_2498 ABC transporter permease K11632 bceB; bacitracin transport system permease protein
D SAMEA4384339_2433 ABC transporter permease protein K19084 braE; bacitracin transport system permease protein
D SAMEA4384339_2434 lolD_2; ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SAMEA4384339_2435 graS; sensor kinase protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SAMEA4384339_2436 yvcP; Two-component response regulator YvcP K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SAMEA4384339_0604 vraG; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SAMEA4384339_0603 macB_1; ABC transporter ATP-binding protein VraF K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SAMEA4384339_0602 bceS; Two-component sensor histidine kinase BceS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SAMEA4384339_0601 graR; YtsA K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SAMEA4384339_0790 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SAMEA4384339_0791 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SAMEA4384339_0792 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SAMEA4384339_0793 dltD; putative lipoteichoic acid biosynthesis protein K03740 dltD; D-alanine transfer protein
D SAMEA4384339_1257 mprF; FmtC (MrpF) protein involved in methicillin resistance / L-lysine modification of phosphatidylglycerol K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMEA4384339_0156 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SAMEA4384339_0269 van Willebrand factor A K18346 vanW; vancomycin resistance protein VanW
D SAMEA4384339_1314 arlS; Two component system histidine kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SAMEA4384339_1315 arlR; Putative response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SAMEA4384339_0811 kapB; kinase associated B family protein K06347 kapB; kinase-associated protein B
D SAMEA4384339_1584 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SAMEA4384339_0222 lytS; Autolysis histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SAMEA4384339_0223 lytR_1; Autolysis response regulater LytR K07705 lytT; two-component system, LytTR family, response regulator LytT
D SAMEA4384339_0224 lrgA; holin-like protein K05338 lrgA; holin-like protein
D SAMEA4384339_0225 lrgB; LrgA-associated membrane protein LrgB K05339 lrgB; holin-like protein LrgB
D SAMEA4384339_1871 agrB; accessory gene regulator B K07813 agrB; accessory gene regulator B
D SAMEA4384339_1872 AgrD protein K07800 agrD; AgrD protein
D SAMEA4384339_1873 agrC; accessory gene regulator C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SAMEA4384339_1874 agrA; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SAMEA4384339_2232 narG; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2231 narH; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2229 narI; Respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2230 respiratory nitrate reductase subunit delta K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D SAMEA4384339_0073 uhpT; sugar phosphate transporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D SAMEA4384339_1218 desK; sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SAMEA4384339_1219 narL; two-component response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SAMEA4384339_1805 vraS_2; Sensor histidine kinase VraS K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D SAMEA4384339_1804 vraR_2; Two component transcriptional regulator VraR, LuxR family K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR
D SAMEA4384339_2227 nreB; Two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D SAMEA4384339_2226 nreC; Two-component response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D SAMEA4384339_2228 nreA; nreA protein K10851 nreA; nitrogen regulatory protein A
D SAMEA4384339_2223 narT; nitrite extrusion protein K10850 narT; MFS transporter, NNP family, putative nitrate transporter
D SAMEA4384339_1193 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_0998 appC; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SAMEA4384339_0999 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SAMEA4384339_1801 ptpA; Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SAMEA4384339_1946 mnaA; UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D SAMEA4384339_1997 arg; arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ssim02024]
D SAMEA4384339_1969 luxS; S-ribosylhomocysteine lyase / Autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SAMEA4384339_1188 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SAMEA4384339_1266 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SAMEA4384339_1267 pabA_2; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SAMEA4384339_1823 attM; putative N-acylhomoserine lactonase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D SAMEA4384339_0126 sraP; cell wall associated biofilm protein K20276 bapA; large repetitive protein
D SAMEA4384339_0171 fadK; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMEA4384339_1652 ribD_2; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SAMEA4384339_0562 Integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SAMEA4384339_1872 AgrD protein K07800 agrD; AgrD protein
D SAMEA4384339_1871 agrB; accessory gene regulator B K07813 agrB; accessory gene regulator B
D SAMEA4384339_1873 agrC; accessory gene regulator C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SAMEA4384339_1874 agrA; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SAMEA4384339_1061 hemolytic protein K20337 psmB; phenol-soluble modulin beta
D SAMEA4384339_1062 antibacterial protein K20337 psmB; phenol-soluble modulin beta
D SAMEA4384339_1646 rot; HTH-type transcriptional regulator rot K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D SAMEA4384339_0841 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SAMEA4384339_0837 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SAMEA4384339_0838 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SAMEA4384339_0839 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0840 oppF_2; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0148 rlp; RGD-containing lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SAMEA4384339_0186 gsiB; ABC superfamily ATP binding cassette transporter, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SAMEA4384339_1280 gsiC_2; binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SAMEA4384339_0146 gsiC_1; Oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SAMEA4384339_1279 opp-2C; oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SAMEA4384339_0147 gsiD; Oligopeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SAMEA4384339_1278 gsiA; ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SAMEA4384339_0145 oppF_1; Putative glutathione transporter, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SAMEA4384339_1277 opp-2F; ABC-type dipeptide/oligopeptide/nickel transport system, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SAMEA4384339_2038 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SAMEA4384339_1925 oxaI; OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMEA4384339_0216 splF; serine protease K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D SAMEA4384339_0880 Competence transcription factor K02250 comK; competence protein ComK
D SAMEA4384339_1524 secD; Protein-export membrane protein secD / Protein-export membrane protein secF K12257 secDF; SecD/SecF fusion protein
D SAMEA4384339_0479 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SAMEA4384339_0734 protein translocase subunit K03075 secG; preprotein translocase subunit SecG
D SAMEA4384339_2059 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SAMEA4384339_1525 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SAMEA4384339_0699 secA1; protein export cytoplasm protein SecA ATPaseRNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMEA4384339_1121 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SAMEA4384339_1123 ffh; Signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:ssim02040]
D SAMEA4384339_2248 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SAMEA4384339_1452 sigA; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SAMEA4384339_0732 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ssim01501]
D SAMEA4384339_0841 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SAMEA4384339_0837 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SAMEA4384339_0838 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SAMEA4384339_0839 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0840 oppF_2; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0585 bmrA; ABC transporter permease/ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SAMEA4384339_1069 ftsI_1; Cell division protein FtsI (Peptidoglycan synthetase) K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D SAMEA4384339_1443 ftsI_2; Cell division protein FtsI [Peptidoglycan synthetase] / Transpeptidase, Penicillin binding protein transpeptidase domain, Penicillin-binding protein 3 K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D SAMEA4384339_1347 ponA; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:ssim01502]
D SAMEA4384339_1918 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMEA4384339_1298 alr2; Diaminopimelate epimerase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMEA4384339_1911 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMEA4384339_1917 murF; putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SAMEA4384339_1070 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SAMEA4384339_1318 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SAMEA4384339_0156 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SAMEA4384339_0269 van Willebrand factor A K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ssim01503]
D SAMEA4384339_1519 lytH; LytH protein involved in methicillin resistance / N-acetylmuramoyl-L-alanine amidase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMEA4384339_1609 degP; Serine protease, DegP/HtrA, do-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMEA4384339_0602 bceS; Two-component sensor histidine kinase BceS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SAMEA4384339_0601 graR; YtsA K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SAMEA4384339_0790 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SAMEA4384339_0791 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SAMEA4384339_0792 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SAMEA4384339_0793 dltD; putative lipoteichoic acid biosynthesis protein K03740 dltD; D-alanine transfer protein
D SAMEA4384339_1257 mprF; FmtC (MrpF) protein involved in methicillin resistance / L-lysine modification of phosphatidylglycerol K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMEA4384339_0603 macB_1; ABC transporter ATP-binding protein VraF K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SAMEA4384339_0604 vraG; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SAMEA4384339_2444 aur; Zinc metalloproteinase precursor / aureolysin K01401 aur; aureolysin [EC:3.4.24.29]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ssim01000]
C 01001 Protein kinases [BR:ssim01001]
D SAMEA4384339_1106 prkC; Serine/threonine protein kinase PrkC, regulator of stationary phase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SAMEA4384339_1906 rsbW; anti-sigma B factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SAMEA4384339_1575 phoR; Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SAMEA4384339_1381 srrB; ResE K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D SAMEA4384339_0024 walK; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SAMEA4384339_0650 saeS; Sensor histidine protein kinase SaeS (exoprotein expression protein S) K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SAMEA4384339_0602 bceS; Two-component sensor histidine kinase BceS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SAMEA4384339_2435 graS; sensor kinase protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SAMEA4384339_1314 arlS; Two component system histidine kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SAMEA4384339_1218 desK; sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SAMEA4384339_1805 vraS_2; Sensor histidine kinase VraS K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D SAMEA4384339_2227 nreB; Two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D SAMEA4384339_1736 vraS_1; Two-component sensor protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D SAMEA4384339_0222 lytS; Autolysis histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SAMEA4384339_1873 agrC; accessory gene regulator C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ssim01009]
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_1105 prpC; Protein serine/threonine phosphatase PrpC, regulation of stationary phase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:ssim01002]
D SAMEA4384339_1083 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SAMEA4384339_2484 pcp; Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D SAMEA4384339_0348 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SAMEA4384339_0982 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SAMEA4384339_0390 gltB_1; glutamate synthase [NADPH] large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SAMEA4384339_1987 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SAMEA4384339_0498 hchA_1; Chaperone protein hchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D SAMEA4384339_1795 yhbO; ThiJ/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D SAMEA4384339_0239 yxeI; choloylglycine hydrolase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D SAMEA4384339_2328 sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D SAMEA4384339_1871 agrB; accessory gene regulator B K07813 agrB; accessory gene regulator B
D SAMEA4384339_0875 metal-dependent membrane protease K07052 K07052; CAAX protease family protein
D SAMEA4384339_1866 abortive infection protein K07052 K07052; CAAX protease family protein
D SAMEA4384339_2143 Protein of pXO2-46 K07052 K07052; CAAX protease family protein
D SAMEA4384339_0849 pepF1_1; Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SAMEA4384339_2444 aur; Zinc metalloproteinase precursor / aureolysin K01401 aur; aureolysin [EC:3.4.24.29]
D SAMEA4384339_0156 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SAMEA4384339_0800 pepA_1; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SAMEA4384339_1634 Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SAMEA4384339_1403 pepT_2; Tripeptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SAMEA4384339_0689 pepT_1; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SAMEA4384339_0259 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SAMEA4384339_0157 lytM_1; peptidase family M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SAMEA4384339_0242 lytM_2; peptidoglycan hydrolase K08259 lytM; lysostaphin [EC:3.4.24.75]
D SAMEA4384339_1808 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SAMEA4384339_1421 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SAMEA4384339_1799 pepS; aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SAMEA4384339_0437 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SAMEA4384339_1628 pepA_3; Glutamyl aminopeptidase; Deblocking aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SAMEA4384339_1263 pepA_2; Deblocking aminopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D SAMEA4384339_1146 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SAMEA4384339_0098 membrane spanning protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D SAMEA4384339_0216 splF; serine protease K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D SAMEA4384339_1609 degP; Serine protease, DegP/HtrA, do-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMEA4384339_0158 dacA_1; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMEA4384339_0584 dacA_2; D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein PBP4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMEA4384339_0721 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SAMEA4384339_0885 lexA_1; transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SAMEA4384339_1238 lexA_2; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SAMEA4384339_0822 spsA; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMEA4384339_0823 spsB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SAMEA4384339_1320 ctpA; carboxy-terminal processing proteinase ctpA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SAMEA4384339_1440 gluP; Putative membrane peptidase, contains TPR repeat domain K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D SAMEA4384339_0929 prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D SAMEA4384339_1137 clpQ; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SAMEA4384339_0149 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SAMEA4384339_1499 yhbU_1; peptidase, U32 family large subunit (C1) K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D SAMEA4384339_1500 yhbU_2; peptidase family U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:ssim01003]
D SAMEA4384339_0866 ugtP; diglucosyldiacylglycerol synthase (LTA membrane anchor synthesis) K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SAMEA4384339_1347 ponA; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMEA4384339_1614 sgtA; Multimodular transpeptidase-transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMEA4384339_1793 mgt; monofunctional biosynthetic peptidoglycan transglycosylase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMEA4384339_0579 tagA; N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SAMEA4384339_0211 tagE_2; poly (glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SAMEA4384339_0513 tagE_3; putative glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SAMEA4384339_0514 tagE_4; Poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SAMEA4384339_0693 llm; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SAMEA4384339_0209 tagE_1; poly (glycerol-phosphate) alpha-glucosyltransferase K22710 tarM; poly(ribitol-phosphate) alpha-N-acetylglucosaminyltransferase [EC:2.4.1.70]
D SAMEA4384339_0648 yfdH; putative glucosyl transferase K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D SAMEA4384339_1128 integral membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
D SAMEA4384339_2462 icaA; Polysaccharide intercellular adhesin (PIA) biosynthesis N-glycosyltransferase IcaA K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ssim01005]
D SAMEA4384339_0693 llm; Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ssim01011]
D SAMEA4384339_1935 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMEA4384339_1959 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SAMEA4384339_0684 murB; putative UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SAMEA4384339_1623 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SAMEA4384339_1071 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SAMEA4384339_0867 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SAMEA4384339_1918 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SAMEA4384339_2091 fmhB; FmhB protein of FemAB family involved in peptidoglycan interpeptide biosynthesis K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16]
D SAMEA4384339_1273 femA_1; UDP-N-acetylmuramoylpentapeptide-glycine glycyltransferase K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17]
D SAMEA4384339_1274 femB; femB protein K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18]
D SAMEA4384339_2322 femA_3; epr protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SAMEA4384339_1298 alr2; Diaminopimelate epimerase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMEA4384339_1911 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SAMEA4384339_1055 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SAMEA4384339_1070 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SAMEA4384339_1318 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SAMEA4384339_0627 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMEA4384339_1317 type 2 phosphatidic acid phosphatase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SAMEA4384339_1347 ponA; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SAMEA4384339_1069 ftsI_1; Cell division protein FtsI (Peptidoglycan synthetase) K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D SAMEA4384339_1443 ftsI_2; Cell division protein FtsI [Peptidoglycan synthetase] / Transpeptidase, Penicillin binding protein transpeptidase domain, Penicillin-binding protein 3 K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D SAMEA4384339_0158 dacA_1; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMEA4384339_0584 dacA_2; D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein PBP4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SAMEA4384339_1614 sgtA; Multimodular transpeptidase-transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMEA4384339_1793 mgt; monofunctional biosynthetic peptidoglycan transglycosylase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D SAMEA4384339_0156 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SAMEA4384339_0157 lytM_1; peptidase family M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SAMEA4384339_0242 lytM_2; peptidoglycan hydrolase K08259 lytM; lysostaphin [EC:3.4.24.75]
D SAMEA4384339_2328 sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D SAMEA4384339_1519 lytH; LytH protein involved in methicillin resistance / N-acetylmuramoyl-L-alanine amidase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ssim01004]
D SAMEA4384339_1116 fabD; Malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SAMEA4384339_0834 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SAMEA4384339_0835 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SAMEA4384339_1117 fabG_2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1164 fabG_3; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_0174 fabG_1; short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SAMEA4384339_1934 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SAMEA4384339_0860 fabI; enoyl-[acyl-carrier protein] reductase (NADPH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SAMEA4384339_1616 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_2414 bclA; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SAMEA4384339_0171 fadK; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMEA4384339_1115 plsX; Fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SAMEA4384339_1251 plsY; Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SAMEA4384339_1608 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ssim01006]
D SAMEA4384339_1413 ispA; Geranyltranstransferase (farnesyldiphosphate synthase) K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SAMEA4384339_1367 heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D SAMEA4384339_1365 hepT; Farnesyl pyrophosphate synthetase K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D SAMEA4384339_1144 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SAMEA4384339_2368 crtM; squalene/phytoene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D SAMEA4384339_1187 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SAMEA4384339_0956 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SAMEA4384339_1028 ctaB; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ssim01007]
D SAMEA4384339_0471 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SAMEA4384339_1612 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMEA4384339_0844 trpS; Tryptophanyl-tRNA synthetase; proteobacterial type K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SAMEA4384339_0474 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SAMEA4384339_0551 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMEA4384339_0415 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SAMEA4384339_1081 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SAMEA4384339_1545 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SAMEA4384339_1641 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMEA4384339_0443 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SAMEA4384339_1517 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMEA4384339_1351 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SAMEA4384339_1518 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SAMEA4384339_1456 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SAMEA4384339_0010 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SAMEA4384339_1147 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SAMEA4384339_1565 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SAMEA4384339_1505 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SAMEA4384339_1042 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SAMEA4384339_1043 pheT_1; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SAMEA4384339_2366 dapL; aspartate aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D SAMEA4384339_0961 patA; putative aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SAMEA4384339_2472 hisC2; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0670 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SAMEA4384339_0495 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SAMEA4384339_0815 rocD2_2; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D SAMEA4384339_0133 rocD2_1; Ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D SAMEA4384339_2402 gabT; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SAMEA4384339_1549 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SAMEA4384339_1783 gsaB; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SAMEA4384339_1633 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SAMEA4384339_0506 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SAMEA4384339_0237 pucG; putative soluble hydrogenase subunit K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ssim00194]
D SAMEA4384339_1937 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SAMEA4384339_1938 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SAMEA4384339_1939 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SAMEA4384339_1940 atpA; ATP synthase F0F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SAMEA4384339_1941 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SAMEA4384339_1942 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SAMEA4384339_1943 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SAMEA4384339_1944 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMEA4384339_1945 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ssim03000]
D SAMEA4384339_2042 lacR; lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SAMEA4384339_0501 glcR; transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SAMEA4384339_0642 glpR; fructose repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SAMEA4384339_1455 ccpN; transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D SAMEA4384339_1619 ccpA_2; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SAMEA4384339_0109 degA; transcriptional repressor of ribose operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SAMEA4384339_1877 scrR; Sucrose operon repressor ScrR, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SAMEA4384339_0196 ccpA_1; LacI family transcriptinal regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SAMEA4384339_0395 treR; GntR family transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D SAMEA4384339_0230 yydK; GntR family transcriptional regulator K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA
D SAMEA4384339_1161 phnF; GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SAMEA4384339_0460 gabR; transcriptional regulator of pyridoxine metabolism K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SAMEA4384339_2299 ydfH; Gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D SAMEA4384339_2461 icaR; Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
D SAMEA4384339_2310 yusO; Transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D SAMEA4384339_0630 mgrA; Transcriptional regulator MgrA (Regulator of autolytic activity) K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D SAMEA4384339_0283 MarR family regulatory protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SAMEA4384339_1646 rot; HTH-type transcriptional regulator rot K20338 rot; MarR family transcriptional regulator, global regulator for virulence
D SAMEA4384339_2193 tcaR_2; Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator
D SAMEA4384339_2222 sarZ_2; MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SAMEA4384339_1192 femC; FemC, factor involved in methicillin resistance / Glutamine synthetase repressor K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SAMEA4384339_0143 cueR; transcriptional regulator, MarR family protein K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D SAMEA4384339_1388 fur; ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SAMEA4384339_1445 zur; Zinc uptake regulation protein ZUR K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D SAMEA4384339_1780 perR; Peroxide stress regulator PerR, FUR family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SAMEA4384339_0175 crp; carD family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SAMEA4384339_0076 arcR; Transcriptional regulator ArcR essential for anaerobic expression of the ADI pathway, Crp/Fnr family K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D SAMEA4384339_1513 iscR; Iron-sulfur cluster regulator IscR K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D SAMEA4384339_1981 czrA; Zn(II) or Co(II)-specific transcriptional repressor protein K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D SAMEA4384339_0152 puuR_1; transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D SAMEA4384339_2178 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D SAMEA4384339_0577 mntR; Mn-dependent transcriptional regulator MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SAMEA4384339_2154 ybbH_2; RpiR family transcriptional regulator K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator
D SAMEA4384339_1353 birA; Biotin-protein ligase / Biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SAMEA4384339_2419 ArsR family transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D SAMEA4384339_0422 purR; PurR: transcription regulator associated with purine metabolism K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SAMEA4384339_1881 rex; Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) K01926 rex; redox-sensing transcriptional repressor
D SAMEA4384339_1139 codY; GTP-sensing transcriptional pleiotropic repressor codY K03706 codY; transcriptional pleiotropic repressor
D SAMEA4384339_0302 Transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D SAMEA4384339_1910 ydcD; Programmed cell death antitoxin YdcD K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D SAMEA4384339_1255 glcT; BglG family transcription antiterminator K03480 glcT; transcriptional antiterminator
D SAMEA4384339_1990 licR_2; putative transcriptional antiterminator K03483 mtlR; mannitol operon transcriptional activator
D SAMEA4384339_1922 csoR_2; Putative cytosolic protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SAMEA4384339_0030 csoR_1; Putative cytosolic protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SAMEA4384339_0254 Sugar diacid utilization regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D SAMEA4384339_2512 parB_2; Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMEA4384339_0318 parB_1; ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMEA4384339_1182 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D SAMEA4384339_1412 argR_2; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SAMEA4384339_0079 argR_1; Arginine pathway regulatory protein ArgR,repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D SAMEA4384339_1473 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SAMEA4384339_1929 tenA; Transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SAMEA4384339_0465 ctsR; CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D SAMEA4384339_0727 gapR; Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator
D SAMEA4384339_1085 pyrR; Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SAMEA4384339_1569 nrdR; NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D SAMEA4384339_0880 Competence transcription factor K02250 comK; competence protein ComK
D SAMEA4384339_1066 mraZ; Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ssim03021]
D SAMEA4384339_2053 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SAMEA4384339_0487 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SAMEA4384339_0488 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SAMEA4384339_1963 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SAMEA4384339_1097 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SAMEA4384339_1452 sigA; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SAMEA4384339_1905 sigB; RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
D SAMEA4384339_0478 putative RNA polymerase sigma factor, sigma-70 family K27000 sigH; RNA polymerase sigma-H factor
D SAMEA4384339_1150 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SAMEA4384339_1416 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D SAMEA4384339_0480 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SAMEA4384339_1908 rsbU; RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D SAMEA4384339_1907 rsbV; anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV K04749 rsbV; anti-sigma B factor antagonist
D SAMEA4384339_1906 rsbW; anti-sigma B factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SAMEA4384339_1497 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D SAMEA4384339_1956 rho; transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ssim03019]
D SAMEA4384339_1119 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SAMEA4384339_1001 hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SAMEA4384339_1159 Zn-dependent hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SAMEA4384339_1170 rny; Hydrolase (HAD superfamily) K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SAMEA4384339_0736 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SAMEA4384339_1729 cbf1; CMP-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SAMEA4384339_1916 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SAMEA4384339_1449 cshB; ATP-dependent RNA helicase YqfR K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SAMEA4384339_1376 recQ_2; DEAD/DEAH box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMEA4384339_0666 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMEA4384339_0732 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMEA4384339_1956 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SAMEA4384339_1581 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SAMEA4384339_1471 dnaK; DnaK protein K04043 dnaK; molecular chaperone DnaK
D SAMEA4384339_1864 groL; heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMEA4384339_1188 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SAMEA4384339_0711 ATP-binding protein UPF0042, contains P-loop K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:ssim03011]
D SAMEA4384339_1371 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SAMEA4384339_1140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SAMEA4384339_2073 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SAMEA4384339_1601 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SAMEA4384339_2062 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SAMEA4384339_0323 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SAMEA4384339_0491 rpsG; 30S ribosomalprotein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SAMEA4384339_2065 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SAMEA4384339_2044 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SAMEA4384339_2080 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SAMEA4384339_2054 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SAMEA4384339_0490 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SAMEA4384339_2055 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SAMEA4384339_1233 rpsN_1; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SAMEA4384339_2066 rpsN_2; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SAMEA4384339_1157 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SAMEA4384339_1124 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SAMEA4384339_2070 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SAMEA4384339_0325 rpsR; 30S ribosomalprotein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SAMEA4384339_2075 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SAMEA4384339_1476 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SAMEA4384339_1466 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SAMEA4384339_0482 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SAMEA4384339_2076 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SAMEA4384339_2079 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SAMEA4384339_2078 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SAMEA4384339_2067 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SAMEA4384339_2064 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SAMEA4384339_0017 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SAMEA4384339_0484 rplJ; 50S ribosomalprotein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SAMEA4384339_0481 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SAMEA4384339_0485 rplL; 50S ribosomalprotein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SAMEA4384339_2045 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SAMEA4384339_2069 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SAMEA4384339_2060 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SAMEA4384339_2072 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SAMEA4384339_2052 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SAMEA4384339_2063 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SAMEA4384339_1127 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SAMEA4384339_1560 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SAMEA4384339_1534 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SAMEA4384339_2074 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SAMEA4384339_2077 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SAMEA4384339_2068 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SAMEA4384339_1532 rpmA; 50S ribosomal protein L25 K02899 RP-L27; large subunit ribosomal protein L27
D SAMEA4384339_1110 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SAMEA4384339_2071 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SAMEA4384339_2061 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SAMEA4384339_1955 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D SAMEA4384339_1039 rpmF; 50S ribosomalprotein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SAMEA4384339_1232 rpmG2; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SAMEA4384339_1442 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SAMEA4384339_2517 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SAMEA4384339_1561 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SAMEA4384339_2056 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SAMEA4384339_0427 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SAMEA4384339_0489 rplGB; 50S ribosomal protein L7AE K07590 RP-L7A; large subunit ribosomal protein L7A
D SAMEA4384339_0444 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_1775 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_1898 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0405 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0456 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0459 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_2004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0403 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0457 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_1779 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_1900 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0453 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_2006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0404 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_1776 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_2005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0458 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_1899 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ssim03009]
D SAMEA4384339_1119 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SAMEA4384339_1458 bex; GTP-binding protein Era K03595 era; GTPase
D SAMEA4384339_1531 obg; GTP-binding protein CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D SAMEA4384339_1150 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SAMEA4384339_1416 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D SAMEA4384339_0480 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SAMEA4384339_1636 rsuA; RNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SAMEA4384339_0418 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SAMEA4384339_1103 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SAMEA4384339_0486 rlmG; methyltransferase domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SAMEA4384339_1035 rsmD; Methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SAMEA4384339_1468 rsmE; Putative cytosolic protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SAMEA4384339_2513 gidB; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SAMEA4384339_1067 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SAMEA4384339_0414 rsmI; Tetrapyrrole (Corrin-Porphyrin) methylase family protein UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SAMEA4384339_0476 TrmH family tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SAMEA4384339_0028 orfX; LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SAMEA4384339_0993 rlmI; LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SAMEA4384339_1104 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SAMEA4384339_1816 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SAMEA4384339_1383 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SAMEA4384339_0857 rluD_1; Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SAMEA4384339_1084 rluD_2; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SAMEA4384339_1737 yhcT; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SAMEA4384339_1885 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SAMEA4384339_0294 ydaF; Ribosomal-protein-L7p-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D SAMEA4384339_1125 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D SAMEA4384339_1469 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SAMEA4384339_1503 yrrK; putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SAMEA4384339_0475 mrnC; Small protein; cysteinyl-tRNA synthetase like-protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SAMEA4384339_1916 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SAMEA4384339_1449 cshB; ATP-dependent RNA helicase YqfR K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SAMEA4384339_1107 engC; Ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SAMEA4384339_1370 engA; GTP-binding protein EngA K03977 engA; GTPase
D SAMEA4384339_1129 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
D SAMEA4384339_1190 hflX; GTP-binding protein K03665 hflX; GTPase
D SAMEA4384339_1487 yqeH; GTP-binding protein YqeH, possibly involved in replication initiation K06948 yqeH; 30S ribosome assembly GTPase
D SAMEA4384339_1951 rimN; Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SAMEA4384339_1521 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SAMEA4384339_1154 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SAMEA4384339_1149 rimP; Putative cytosolic protein K09748 rimP; ribosome maturation factor RimP
D SAMEA4384339_0003 S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D SAMEA4384339_1482 ybeB; Iojap-related protein K09710 ybeB; ribosome-associated protein
D SAMEA4384339_1461 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D SAMEA4384339_1485 RNA binding protein K07574 yhbY; RNA-binding protein
D SAMEA4384339_0698 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D SAMEA4384339_0321 ychF; GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D SAMEA4384339_1038 ylbN; YlbN-like protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ssim03016]
D SAMEA4384339_1394 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SAMEA4384339_1354 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SAMEA4384339_1147 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SAMEA4384339_1081 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SAMEA4384339_1641 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMEA4384339_0415 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SAMEA4384339_0551 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMEA4384339_0443 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SAMEA4384339_1517 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMEA4384339_1505 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SAMEA4384339_1351 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SAMEA4384339_1456 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SAMEA4384339_1565 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SAMEA4384339_0010 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SAMEA4384339_0474 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SAMEA4384339_1545 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SAMEA4384339_1518 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SAMEA4384339_1042 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SAMEA4384339_1043 pheT_1; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SAMEA4384339_1612 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMEA4384339_0844 trpS; Tryptophanyl-tRNA synthetase; proteobacterial type K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SAMEA4384339_1520 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SAMEA4384339_1725 hit; Hit-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SAMEA4384339_1631 trmB; tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SAMEA4384339_2047 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SAMEA4384339_1155 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SAMEA4384339_1510 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1598 iscS_2; Selenocysteine lyase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1951 rimN; Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SAMEA4384339_1187 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SAMEA4384339_2515 mnmE; tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SAMEA4384339_2514 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SAMEA4384339_2516 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SAMEA4384339_0471 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SAMEA4384339_0641 ybaK; ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SAMEA4384339_0510 tadA_1; tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SAMEA4384339_1177 miaB_1; tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SAMEA4384339_1467 miaB_2; MiaB family protein, possibly involved in tRNA or rRNA modification K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D SAMEA4384339_1135 gid; tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SAMEA4384339_1126 trmD; tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SAMEA4384339_1451 trmK; Putative tRNA-m1A22 methylase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SAMEA4384339_1742 trmL; tRNA (cytosine34-2-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SAMEA4384339_1040 spoU; SpoU rRNA Methylase family protein K03437 spoU; RNA methyltransferase, TrmH family
D SAMEA4384339_1509 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SAMEA4384339_0798 iron binding protein from the HesB_IscA_SufA family K13628 iscA; iron-sulfur cluster assembly protein
D SAMEA4384339_1527 queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SAMEA4384339_0657 queC; Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SAMEA4384339_0190 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SAMEA4384339_0656 queD; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SAMEA4384339_0655 queE; Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SAMEA4384339_0674 queF; NADPH dependent preQ0 reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SAMEA4384339_1743 queG; (Fe-S)-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SAMEA4384339_2391 adenine nucleotide alpha hydrolases superfamily protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SAMEA4384339_1526 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SAMEA4384339_1597 thiI; Thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SAMEA4384339_0435 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SAMEA4384339_1886 ydiC; Inactive protein of metal-dependent protease family, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SAMEA4384339_1884 gcp; glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SAMEA4384339_1887 ydiB; ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SAMEA4384339_1515 thiF; hesA/moeB/thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SAMEA4384339_1037 Putative cytosolic protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D SAMEA4384339_0736 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:ssim03012]
D SAMEA4384339_1153 infB; protein translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2
D SAMEA4384339_1882 yheS_2; ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SAMEA4384339_1141 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SAMEA4384339_0493 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SAMEA4384339_0492 fusA; protein translation elongation factor G (EF-G) K02355 fusA; elongation factor G
D SAMEA4384339_1953 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SAMEA4384339_1143 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D SAMEA4384339_1952 prmC; Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SAMEA4384339_0428 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SAMEA4384339_2057 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SAMEA4384339_1420 efp; Translation elongation factor P; Translation initiation factor 5A K02356 efp; elongation factor P
D SAMEA4384339_0700 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D SAMEA4384339_0869 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:ssim03110]
D SAMEA4384339_0832 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SAMEA4384339_0468 clpC; endopeptidase Clp ATP-binding subunit C K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SAMEA4384339_2352 clpL; putative ATP-dependent protease ATP-binding subunit ClpL K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SAMEA4384339_1556 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SAMEA4384339_1138 hslU; ATP-dependent endopeptidase hsl ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SAMEA4384339_1471 dnaK; DnaK protein K04043 dnaK; molecular chaperone DnaK
D SAMEA4384339_1864 groL; heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMEA4384339_1470 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SAMEA4384339_0438 hslO; Chaperonin (heat shock protein 33) K04083 hslO; molecular chaperone Hsp33
D SAMEA4384339_1472 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SAMEA4384339_1865 groES; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SAMEA4384339_1609 degP; Serine protease, DegP/HtrA, do-like protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SAMEA4384339_0437 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SAMEA4384339_1944 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SAMEA4384339_0812 Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SAMEA4384339_1728 prsA; protein export protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SAMEA4384339_1050 trxA_2; Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:ssim04131]
D SAMEA4384339_1364 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SAMEA4384339_1993 fmtB; putative surface anchored protein K12472 EPS15; epidermal growth factor receptor substrate 15
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_0728 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMEA4384339_2251 pgm_2; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0331 cobC_1; truncated phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_1580 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ssim03032]
D SAMEA4384339_1332 rnhA; cell wall enzyme EbsB K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SAMEA4384339_1368 hu; DNA-binding protein II HBsu K03530 hupB; DNA-binding protein HU-beta
D SAMEA4384339_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SAMEA4384339_0018 dnaC_1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SAMEA4384339_1453 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SAMEA4384339_1568 dnaB; chromosome replication initiation/membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D SAMEA4384339_1567 dnaI; DnaI K11144 dnaI; primosomal protein DnaI
D SAMEA4384339_0899 ssb_2; single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1932 ssbB; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0324 ssb_1; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1585 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMEA4384339_1148 polC_1; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SAMEA4384339_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMEA4384339_1477 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMEA4384339_0409 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMEA4384339_1813 polC_2; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMEA4384339_0400 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMEA4384339_1130 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SAMEA4384339_1045 rnhC; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SAMEA4384339_1573 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMEA4384339_1826 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SAMEA4384339_1334 ypcP; DNA polymerase I K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D SAMEA4384339_0006 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SAMEA4384339_0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SAMEA4384339_1253 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SAMEA4384339_1252 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SAMEA4384339_1134 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SAMEA4384339_2083 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ssim03036]
D SAMEA4384339_1119 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_1368 hu; DNA-binding protein II HBsu K03530 hupB; DNA-binding protein HU-beta
D SAMEA4384339_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SAMEA4384339_1975 dps; Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D SAMEA4384339_1188 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SAMEA4384339_1120 smc; putative chromosome partition protein K03529 smc; chromosome segregation protein
D SAMEA4384339_1385 scpA; ScpA K05896 scpA; segregation and condensation protein A
D SAMEA4384339_1384 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SAMEA4384339_1073 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SAMEA4384339_0433 putative cell division protein K13052 divIC; cell division protein DivIC
D SAMEA4384339_1160 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SAMEA4384339_1624 sftA; SpoIIIE family cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SAMEA4384339_1068 cell division protein K03586 ftsL; cell division protein FtsL
D SAMEA4384339_1072 divIB; putative cell division protein K03589 ftsQ; cell division protein FtsQ
D SAMEA4384339_1025 ftsW_1; cell division protein K03588 ftsW; cell division protein FtsW
D SAMEA4384339_1074 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SAMEA4384339_1046 zapA; Z-ring-associated protein K09888 zapA; cell division protein ZapA
D SAMEA4384339_1519 lytH; LytH protein involved in methicillin resistance / N-acetylmuramoyl-L-alanine amidase domain protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMEA4384339_1599 ezrA; Septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D SAMEA4384339_1077 sepF; cell division-like FtsZ-interacting protein K09772 sepF; cell division inhibitor SepF
D SAMEA4384339_1537 Rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D SAMEA4384339_1536 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SAMEA4384339_1919 ftsW_2; Cell division protein FtsW K05837 rodA; rod shape determining protein RodA
D SAMEA4384339_2512 parB_2; Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMEA4384339_0318 parB_1; ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMEA4384339_1253 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SAMEA4384339_1252 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SAMEA4384339_2514 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SAMEA4384339_2513 gidB; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SAMEA4384339_1135 gid; tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SAMEA4384339_1136 xerC; Site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D SAMEA4384339_1387 xerD; Integrase/recombinase (XerD/RipX family) K04763 xerD; integrase/recombinase XerD
D SAMEA4384339_0431 mazG; Nucleoside triphosphate pyrophosphohydrolase K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D SAMEA4384339_2007 apbC; Iron-sulfur cluster assembly/repair protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SAMEA4384339_1208 MloA K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SAMEA4384339_1555 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein
D SAMEA4384339_0713 whiA; sporulation Regulator WhiA C terminal domain protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ssim03400]
D SAMEA4384339_2349 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SAMEA4384339_0635 phrB; DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SAMEA4384339_0527 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SAMEA4384339_2175 DNA-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SAMEA4384339_1787 mutY; HhH-GPD superfamily base excision DNA repair protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SAMEA4384339_1349 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SAMEA4384339_1670 ytkD; phosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SAMEA4384339_2295 nudG; 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SAMEA4384339_0497 nudI; phosphohydrolase (MutT/nudix family protein) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SAMEA4384339_0920 dut; dUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SAMEA4384339_2277 alkA; DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SAMEA4384339_1547 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SAMEA4384339_1572 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SAMEA4384339_1448 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SAMEA4384339_1523 recJ; putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SAMEA4384339_1826 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SAMEA4384339_1573 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SAMEA4384339_0705 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SAMEA4384339_0704 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SAMEA4384339_1051 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SAMEA4384339_1827 pcrA; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SAMEA4384339_0487 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SAMEA4384339_0488 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SAMEA4384339_2053 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SAMEA4384339_1963 rpoE; DNA-directed RNA polymerase delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SAMEA4384339_1097 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SAMEA4384339_0429 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SAMEA4384339_1180 mutS_1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SAMEA4384339_1049 mutS2; Recombination inhibitory protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SAMEA4384339_1181 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SAMEA4384339_1415 xseA; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SAMEA4384339_1414 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SAMEA4384339_1585 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SAMEA4384339_1148 polC_1; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SAMEA4384339_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SAMEA4384339_1477 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SAMEA4384339_0409 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SAMEA4384339_1813 polC_2; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SAMEA4384339_0400 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SAMEA4384339_0899 ssb_2; single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1932 ssbB; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0324 ssb_1; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1507 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SAMEA4384339_1169 recA; recombinase A K03553 recA; recombination protein RecA
D SAMEA4384339_1529 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D SAMEA4384339_1528 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SAMEA4384339_1099 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SAMEA4384339_1245 sbcC; Exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D SAMEA4384339_1244 sbcD; SbcD protein K03547 sbcD; DNA repair protein SbcD/Mre11
D SAMEA4384339_0469 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SAMEA4384339_0004 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SAMEA4384339_1113 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SAMEA4384339_0051 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SAMEA4384339_1457 recO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SAMEA4384339_0402 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D SAMEA4384339_1411 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SAMEA4384339_1346 recU; RecU K03700 recU; recombination protein U
D SAMEA4384339_0825 addA; ATP-dependent nuclease, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SAMEA4384339_0824 addB; helicase-exonuclease AddAB, AddB subunit K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SAMEA4384339_0006 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SAMEA4384339_0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SAMEA4384339_1134 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SAMEA4384339_1368 hu; DNA-binding protein II HBsu K03530 hupB; DNA-binding protein HU-beta
D SAMEA4384339_1376 recQ_2; DEAD/DEAH box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMEA4384339_0666 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SAMEA4384339_1814 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SAMEA4384339_1261 umuC; DNA-damage repair protein K03502 umuC; DNA polymerase V
D SAMEA4384339_0885 lexA_1; transcriptional repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SAMEA4384339_1238 lexA_2; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SAMEA4384339_1792 recX; Regulatory protein recX K03565 recX; regulatory protein
D SAMEA4384339_1048 polX; DNA polymerase X family K02347 polX; DNA polymerase (family X)
D SAMEA4384339_1352 dinG; dinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SAMEA4384339_0677 nrdE2; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SAMEA4384339_0678 nrdF1; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SAMEA4384339_1586 nrnA; Bifunctional oligoribonuclease and PAP phosphatase nrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ssim03029]
D SAMEA4384339_1153 infB; protein translation initiation factor 2 (IF-2) K02519 infB; translation initiation factor IF-2
D SAMEA4384339_1141 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SAMEA4384339_0493 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SAMEA4384339_0492 fusA; protein translation elongation factor G (EF-G) K02355 fusA; elongation factor G
D SAMEA4384339_1458 bex; GTP-binding protein Era K03595 era; GTPase
D SAMEA4384339_1612 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SAMEA4384339_1641 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SAMEA4384339_1517 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SAMEA4384339_1456 glyS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SAMEA4384339_0551 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SAMEA4384339_1819 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SAMEA4384339_1818 gatB_2; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SAMEA4384339_1820 gatC_3; Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SAMEA4384339_0899 ssb_2; single-stranded DNA-binding protein ssb K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1932 ssbB; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_0324 ssb_1; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SAMEA4384339_1471 dnaK; DnaK protein K04043 dnaK; molecular chaperone DnaK
D SAMEA4384339_1472 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SAMEA4384339_1864 groL; heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMEA4384339_1865 groES; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SAMEA4384339_1470 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SAMEA4384339_1510 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1598 iscS_2; Selenocysteine lyase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_2007 apbC; Iron-sulfur cluster assembly/repair protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SAMEA4384339_1028 ctaB; Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D SAMEA4384339_1027 ctaA; cytochrome oxidase assembly protein CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SAMEA4384339_1925 oxaI; OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ssim02000]
D SAMEA4384339_1785 Lipid A export ATP-binding/permease protein MsbA K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D SAMEA4384339_0585 bmrA; ABC transporter permease/ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SAMEA4384339_0629 cydC; Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SAMEA4384339_0628 cydD; Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SAMEA4384339_0665 yjjK; duplicated ATPase domains-containing ABC transporters K15738 uup; ABC transport system ATP-binding/permease protein
D SAMEA4384339_2108 modA; Molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D SAMEA4384339_2107 modB; Molybdenum transport system permease protein modB K02018 modB; molybdate transport system permease protein
D SAMEA4384339_2106 modC; Molybdenum transport ATP-binding protein modC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SAMEA4384339_1014 potD; ABC transporter, periplasmic spermidine putrescine-binding protein potD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SAMEA4384339_1013 ydcV; PotC K11070 potC; spermidine/putrescine transport system permease protein
D SAMEA4384339_1012 potB; Spermidine Putrescine ABC transporter permease component potB K11071 potB; spermidine/putrescine transport system permease protein
D SAMEA4384339_1011 potA; Spermidine Putrescine transport ATP-binding protein potA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SAMEA4384339_2269 opuCC_2; Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D SAMEA4384339_0668 opuCC_1; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB K05845 opuC; osmoprotectant transport system substrate-binding protein
D SAMEA4384339_2268 yehW; putative glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SAMEA4384339_2270 opuCB; Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB K05846 opuBD; osmoprotectant transport system permease protein
D SAMEA4384339_2271 proV_2; glycine betaine/carnitine/choline ABC transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SAMEA4384339_0667 proV_1; Glycine betaine ABC transport system, ATP-binding protein OpuAA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SAMEA4384339_0121 ssuA; putative lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D SAMEA4384339_0122 ssuC; nitrate/sulfonate/bicarbinate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D SAMEA4384339_0120 ssuB; ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SAMEA4384339_2278 ybbM; ABC transporter ATP-binding protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D SAMEA4384339_2279 ybbL; Methionine ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SAMEA4384339_1287 pstS; phosphate-binding lipoprotein K02040 pstS; phosphate transport system substrate-binding protein
D SAMEA4384339_1286 pstC; PstC K02037 pstC; phosphate transport system permease protein
D SAMEA4384339_1285 pstA; Phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D SAMEA4384339_1284 pstB3; PstB protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SAMEA4384339_2248 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SAMEA4384339_2247 tcyB; cystine transport system permease protein K10009 tcyB; L-cystine transport system permease protein
D SAMEA4384339_2246 tcyC_2; amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SAMEA4384339_1746 artQ; extracellular glutamine-binding protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D SAMEA4384339_1745 glnQ_1; Glutamine transport ATP-binding protein glnQ K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SAMEA4384339_0768 metQ_2; Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SAMEA4384339_2403 metQ_3; putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SAMEA4384339_0382 metQ_1; ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SAMEA4384339_0767 metP_2; putative ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SAMEA4384339_0381 metP_1; methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D SAMEA4384339_0766 metN2; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SAMEA4384339_0380 metN; Methionine import ATP-binding protein metN 1 K02071 metN; D-methionine transport system ATP-binding protein
D SAMEA4384339_1744 tcyC_1; glutamate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SAMEA4384339_0841 oppA; Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SAMEA4384339_0837 oppB; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D SAMEA4384339_0838 oppC; Oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D SAMEA4384339_0839 oppD; Oligopeptide transport ATP-binding protein oppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0840 oppF_2; Oligopeptide transport ATP-binding protein oppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SAMEA4384339_0148 rlp; RGD-containing lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SAMEA4384339_0186 gsiB; ABC superfamily ATP binding cassette transporter, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SAMEA4384339_1280 gsiC_2; binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SAMEA4384339_0146 gsiC_1; Oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SAMEA4384339_1279 opp-2C; oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SAMEA4384339_0147 gsiD; Oligopeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SAMEA4384339_1278 gsiA; ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SAMEA4384339_0145 oppF_1; Putative glutathione transporter, ATP-binding component K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SAMEA4384339_1277 opp-2F; ABC-type dipeptide/oligopeptide/nickel transport system, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SAMEA4384339_2019 yhfQ_2; iron(III) dicitrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D SAMEA4384339_2022 yhfQ_3; iron(III) dicitrate-binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D SAMEA4384339_2017 htsC_1; Heme ABC type transporter HtsABC, permease protein HtsC K23182 fecD; ferric citrate transport system permease protein
D SAMEA4384339_2020 htsC_2; Heme ABC type transporter HtsABC, permease protein HtsC K23182 fecD; ferric citrate transport system permease protein
D SAMEA4384339_2018 yfiZ; ferrichrome ABC transporter K23183 fecC; ferric citrate transport system permease protein
D SAMEA4384339_2021 htsB; Heme ABC type transporter HtsABC, permease protein HtsB K23183 fecC; ferric citrate transport system permease protein
D SAMEA4384339_2113 fhuD2; Ferrichrome-binding periplasmic protein precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D SAMEA4384339_0590 feuB; FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D SAMEA4384339_0591 fhuG; Ferrichrome transport system permease protein fhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D SAMEA4384339_0589 fhuA; Ferrichrome transport ATP-binding protein fhuA K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D SAMEA4384339_0682 yclQ_1; Iron compound ABC uptake transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D SAMEA4384339_1794 yclQ_2; cobalamin Fe3+-siderophores ABC transporter periplasmic protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D SAMEA4384339_0680 feuC; Iron compound ABC uptake transporter permease protein K25283 yclO; iron-siderophore transport system permease protein
D SAMEA4384339_0679 fecD; FatD K25284 yclN; iron-siderophore transport system permease protein
D SAMEA4384339_0681 yusV_2; Iron compound ABC uptake transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D SAMEA4384339_0952 yhfQ_1; iron(III) dicitrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SAMEA4384339_0072 fhuD; ferrichrome-binding periplasmic protein precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SAMEA4384339_0554 btuF; Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SAMEA4384339_0555 transporter K02015 ABC.FEV.P; iron complex transport system permease protein
D SAMEA4384339_1986 glnQ_2; ATP-binding ATP transporter protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SAMEA4384339_0279 psaA_1; manganese ABC transporter periplasmic-binding protein SitA K19975 mntC; manganese transport system substrate-binding protein
D SAMEA4384339_0574 psaA_2; ABC transporter substrate-binding protein K19975 mntC; manganese transport system substrate-binding protein
D SAMEA4384339_0278 mntB; manganese ABC transporter inner membrane permease SitD K19976 mntB; manganese transport system permease protein
D SAMEA4384339_0575 sitD; Manganese ABC transporter, inner membrane permease protein SitD K19976 mntB; manganese transport system permease protein
D SAMEA4384339_0277 yusV_1; Mn2+/Zn2+ ABC transporter ATPase K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D SAMEA4384339_0576 sitB; Manganese ABC transporter, ATP-binding protein SitB K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D SAMEA4384339_2241 zinT; Zn-binding lipoprotein adcA-like protein K09815 znuA; zinc transport system substrate-binding protein
D SAMEA4384339_2311 adcA; adhesion lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D SAMEA4384339_1446 znuB; ABC transporter permease K09816 znuB; zinc transport system permease protein
D SAMEA4384339_1447 znuC; ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SAMEA4384339_2111 bioY; biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D SAMEA4384339_2479 UPF0397 protein HMPREF0776_0754 K16924 mtsT; energy-coupling factor transport system substrate-specific component
D SAMEA4384339_0987 ykoC; transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for hydroxymethylPyrimidine K16785 ecfT; energy-coupling factor transport system permease protein
D SAMEA4384339_2048 ecfT; Transmembrane component of general energizing module of ECF transporters K16785 ecfT; energy-coupling factor transport system permease protein
D SAMEA4384339_2477 mtsC; Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter K16785 ecfT; energy-coupling factor transport system permease protein
D SAMEA4384339_2050 ecfA1_3; cobalt import ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SAMEA4384339_2049 ecfA1_2; ATPase component of general energizing module of ECF transporters K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SAMEA4384339_0988 ykoD_1; Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SAMEA4384339_2478 ykoD_2; heme ABC transporter ATP-binding protein CcmA K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SAMEA4384339_0989 ykoE; Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine K16925 ykoE; energy-coupling factor transport system permease protein
D SAMEA4384339_1789 tagG; Teichoic acid translocation permease protein TagG K09692 tagG; teichoic acid transport system permease protein
D SAMEA4384339_0581 teichoic acid ABC transporter permease protein K09692 tagG; teichoic acid transport system permease protein
D SAMEA4384339_1790 tagH_2; Teichoic acid export ATP-binding protein TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SAMEA4384339_0580 tagH_1; TagH K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SAMEA4384339_2196 Putative hemin transport system permease protein hrtB K09813 hrtB; hemin transport system permease protein
D SAMEA4384339_2195 hrtA; Heme efflux system ATPase HrtA K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D SAMEA4384339_2498 ABC transporter permease K11632 bceB; bacitracin transport system permease protein
D SAMEA4384339_2497 vraD; ABC transporter ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D SAMEA4384339_2433 ABC transporter permease protein K19084 braE; bacitracin transport system permease protein
D SAMEA4384339_2434 lolD_2; ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D SAMEA4384339_0604 vraG; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SAMEA4384339_0603 macB_1; ABC transporter ATP-binding protein VraF K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SAMEA4384339_1723 ABC transporter K25157 ecsB; ABC-2 type transport system permease protein
D SAMEA4384339_1724 ecsA_1; ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_1217 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMEA4384339_1851 ABC-2 transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMEA4384339_2170 yhaP; Sodium export permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMEA4384339_0291 ybhR; ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SAMEA4384339_1216 ybhF_2; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_1311 cysA; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_1852 ybhF_3; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_1854 ecsA_2; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_2171 ecsA_3; ABC-type transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_0292 ybhF_1; putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_0304 ecfA1_1; ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SAMEA4384339_2501 macB_2; ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SAMEA4384339_0247 ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SAMEA4384339_2502 macB_3; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SAMEA4384339_0136 thiQ; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SAMEA4384339_0248 lolD_1; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SAMEA4384339_0772 yurY; iron-sulfur cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SAMEA4384339_1837 sdcS; sodium-dependent dicarboxylate transporter sdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D SAMEA4384339_0284 mepA; Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K18908 mepA; MATE family, multidrug efflux pump
D SAMEA4384339_0198 lacY_1; sucrose permease, major facilitator superfamily K02532 lacY; MFS transporter, OHS family, lactose permease
D SAMEA4384339_0200 lacY_3; sucrose permease, major facilitator superfamily K02532 lacY; MFS transporter, OHS family, lactose permease
D SAMEA4384339_0525 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SAMEA4384339_2304 garP; putative transporter protein K03535 gudP; MFS transporter, ACS family, glucarate transporter
D SAMEA4384339_0153 yeaN_1; transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SAMEA4384339_0267 yeaN_2; ABC transporter permease K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SAMEA4384339_0073 uhpT; sugar phosphate transporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D SAMEA4384339_0286 glpT; Glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D SAMEA4384339_2223 narT; nitrite extrusion protein K10850 narT; MFS transporter, NNP family, putative nitrate transporter
D SAMEA4384339_2191 bcr; teicoplanin resistance associated membrane protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SAMEA4384339_0639 tetA; NorA K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein
D SAMEA4384339_2276 pbuE_2; chloramphenicol resistance protein K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D SAMEA4384339_2025 Macrolide-efflux protein K23448 sfaA; MFS transporter, DHA1 family, staphyloferrin A biosynthesis exporter
D SAMEA4384339_0127 integral membrane protein LmrP K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D SAMEA4384339_0187 pbuE_1; major facilitator superfamily protein K08164 ybcL; MFS transporter, DHA1 family, putative efflux transporter
D SAMEA4384339_2267 norB_3; integral membrane efflux protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D SAMEA4384339_2008 emrB_2; multidrug resistance transporter K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein
D SAMEA4384339_2010 transport protein K18935 sdrM; MFS transporter, DHA2 family, multidrug resistance protein
D SAMEA4384339_2011 hsrA_2; multidrug transporter K18935 sdrM; MFS transporter, DHA2 family, multidrug resistance protein
D SAMEA4384339_2249 emrB_4; transport system protein K18936 mdeA; MFS transporter, DHA2 family, multidrug resistance protein
D SAMEA4384339_0310 yihN; major facilitator family transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D SAMEA4384339_0996 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SAMEA4384339_0995 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SAMEA4384339_1322 crr; PTS system glucose-specific transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SAMEA4384339_2340 glcB; Pts system, glucose-specific iiabc component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_0140 ptsG; PTS system transporter subunit IIABC K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SAMEA4384339_1607 ptaA; PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SAMEA4384339_2215 scrA; PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SAMEA4384339_0108 bglF_1; PTS system beta-glucoside-specific IIB component/PTS system beta-glucoside-specific IIC component/PTS system beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SAMEA4384339_0231 bglF_2; PTS system beta-glucoside-specific IIB component/PTS system beta-glucoside-specific IIC component/PTS system beta-glucoside-specific IIA component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SAMEA4384339_0393 treB; PTS system trehalose-specific transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SAMEA4384339_2153 glvC; PTS system, arbutin-like IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D SAMEA4384339_0644 fruA; PTS system fructose-specific transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SAMEA4384339_1991 mtlF_2; PTS system mannitol-specific transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SAMEA4384339_1989 mtlF_1; PTS system, mannitol specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SAMEA4384339_2037 lacF; PTS system lactose-specific transporter subunit IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SAMEA4384339_2036 lacE; PTS system, lactose-specific IIBC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SAMEA4384339_0202 manP; PTS system, galactitol-specific IIA component K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200]
D SAMEA4384339_0203 gatB_1; PTS system galactitol-specific transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200]
D SAMEA4384339_0204 gatC_2; PTS system, galactitol-specific IIC component K02775 gatC; galactitol PTS system EIIC component
D SAMEA4384339_0104 gatC_1; PTS system, galactitol-specific IIC component K20114 gatC; galactose PTS system EIIC component
D SAMEA4384339_0594 dhaM; PTS-dependent dihydroxyacetone kinase phosphotransfer protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SAMEA4384339_1183 gla; glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator
D SAMEA4384339_1878 amtB; ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D SAMEA4384339_1246 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SAMEA4384339_0319 kefA; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel
D SAMEA4384339_0858 mgtE; putative divalent cation transport protein K06213 mgtE; magnesium transporter
D SAMEA4384339_2115 Urea transporter K08717 utp; urea transporter
D SAMEA4384339_2181 corA_1; Magnesium and cobalt transport protein corA K03284 corA; magnesium transporter
D SAMEA4384339_2214 magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D SAMEA4384339_2351 corA_2; CorA-like Mg2+ transporter protein K03284 corA; magnesium transporter
D SAMEA4384339_1662 crcB_1; CrcB family protein K06199 crcB; fluoride exporter
D SAMEA4384339_1663 crcB_2; CrcB-like protein K06199 crcB; fluoride exporter
D SAMEA4384339_0646 ytfL; Hemolysin-like protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SAMEA4384339_0778 yfjD; Hemolysin-like protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SAMEA4384339_2429 slsD_2; putative LPXTG cell wall-anchored protein (pseudogene) K21449 ata; trimeric autotransporter adhesin
D SAMEA4384339_0224 lrgA; holin-like protein K05338 lrgA; holin-like protein
D SAMEA4384339_2343 cidA; Holin-like protein CidA K06518 cidA; holin-like protein
D SAMEA4384339_1563 lysP_2; Lysine-specific permease K11733 lysP; lysine-specific permease
D SAMEA4384339_1579 cycA_2; putative D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D SAMEA4384339_2260 cycA_3; putative amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D SAMEA4384339_0235 cycA_1; putative amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D SAMEA4384339_0077 arcD; Arginine/ornithine antiporter ArcD K03758 arcD; arginine:ornithine antiporter / lysine permease
D SAMEA4384339_1982 czcD; Cobalt-zinc-cadmium resistance protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SAMEA4384339_2132 ykkC; SMR-type multidrug efflux transporter K18924 ykkC; paired small multidrug resistance pump
D SAMEA4384339_2133 ykkD; sugE protein K18925 ykkD; paired small multidrug resistance pump
D SAMEA4384339_2085 glcU; glucose uptake protein glcU K05340 glcU; glucose uptake protein
D SAMEA4384339_2488 rarD; rarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D SAMEA4384339_0562 Integral membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SAMEA4384339_2169 ynfA; membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D SAMEA4384339_0801 Transporter, Na+/H+ antiporter family K07084 yuiF; putative amino acid transporter
D SAMEA4384339_2297 gntP; Gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SAMEA4384339_0097 gntT; gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SAMEA4384339_2202 lctP_2; L-lactate permease K03303 lutP; lactate permease
D SAMEA4384339_0103 lctP_1; L-lactate permease K03303 lutP; lactate permease
D SAMEA4384339_1247 opuD; Glycine betaine transporter OpuD K05020 opuD; glycine betaine transporter
D SAMEA4384339_2030 betP; glycine betaine transporter K05020 opuD; glycine betaine transporter
D SAMEA4384339_1821 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D SAMEA4384339_2220 gltT; Proton/glutamate symport protein; Sodium/glutamate symport protein K11102 gltP; proton glutamate symport protein
D SAMEA4384339_2179 gltS; glutamate permease K03312 gltS; glutamate:Na+ symporter, ESS family
D SAMEA4384339_2128 mleN; putative Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D SAMEA4384339_2261 nhaK_2; Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SAMEA4384339_0573 nhaK_1; Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SAMEA4384339_0873 ktrB; KtrB K03498 trkH; trk/ktr system potassium uptake protein
D SAMEA4384339_1000 trkA; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D SAMEA4384339_0255 ybbW; allantoin permease K10975 allP; allantoin permease
D SAMEA4384339_1086 pyrP; Uracil permease K02824 uraA; uracil permease
D SAMEA4384339_0346 pbuX; Xanthine permease K16169 pbuX; xanthine permease
D SAMEA4384339_2082 pbuG; Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SAMEA4384339_0464 nupC_2; pyrimidine nucleoside transport protein K11535 nupC; nucleoside transport protein
D SAMEA4384339_0586 nupG; Pyrimidine nucleoside transporter K16323 yxjA; purine nucleoside transport protein
D SAMEA4384339_2490 nixA; nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D SAMEA4384339_2161 ychM_2; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D SAMEA4384339_0195 ychM_1; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D SAMEA4384339_1017 mntH; Manganese transport protein MntH K03322 mntH; manganese transport protein
D SAMEA4384339_1843 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D SAMEA4384339_0810 mnhA; Na(+) H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D SAMEA4384339_0566 mrpA; Putative antiporter subunit mnhA2 K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D SAMEA4384339_0809 mnhB; Na(+) H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D SAMEA4384339_0567 mrpB; Na(+) H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D SAMEA4384339_0808 mnhC; Na+/H+ antiporter subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D SAMEA4384339_0568 mrpC; Na(+) H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D SAMEA4384339_0807 mnhD; Na(+) H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D SAMEA4384339_0569 mnhD2; putative antiporter subunit mnhD2 K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D SAMEA4384339_0806 mnhE; Na(+) H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D SAMEA4384339_0570 mrpE; Na(+) H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D SAMEA4384339_0805 mnhF1; putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D SAMEA4384339_0571 mrpF; Na(+) H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D SAMEA4384339_0804 mnhG1; ShaG K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D SAMEA4384339_0572 mrpG; monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D SAMEA4384339_2087 AEC family malonate efflux carrier K24180 mleP; malate permease and related proteins
D SAMEA4384339_0755 argO; LysE type translocator protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SAMEA4384339_0011 ygaZ; AzlC K26605 azlC; branched chain amino acid efflux pump
D SAMEA4384339_0012 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D SAMEA4384339_1379 ribU; riboflavin transporter K23675 fmnP; riboflavin transporter
D SAMEA4384339_1331 yhhQ; Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D SAMEA4384339_1025 ftsW_1; cell division protein K03588 ftsW; cell division protein FtsW
D SAMEA4384339_0297 fepC; high-affinity iron permease K07243 FTR; high-affinity iron transporter
D SAMEA4384339_0295 efeO; Ferrous iron transport periplasmic protein EfeO K07224 efeO; iron uptake system component EfeO
D SAMEA4384339_0296 efeN; Sec-independent exported protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D SAMEA4384339_2232 narG; Respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2231 narH; Respiratory nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2229 narI; Respiratory nitrate reductase gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SAMEA4384339_2355 feoA domain protein K04758 feoA; ferrous iron transport protein A
D SAMEA4384339_2354 feoB; putative ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ssim02044]
D SAMEA4384339_1078 cell division protein (putative) K02221 yggT; YggT family protein
D SAMEA4384339_1480 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D SAMEA4384339_1479 tadA_2; ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SAMEA4384339_1478 competence protein ComEC K02238 comEC; competence protein ComEC
D SAMEA4384339_0696 putative helicase K02240 comFA; competence protein ComFA
D SAMEA4384339_0697 ComF operon protein C K02242 comFC; competence protein ComFC
D SAMEA4384339_1435 comGA; Late competence protein ComGA, access of DNA to ComEA K02243 comGA; competence protein ComGA
D SAMEA4384339_1434 epsF; ComG operon protein 2 K02244 comGB; competence protein ComGB
D SAMEA4384339_1433 comGC; Late competence protein ComGC, access of DNA to ComEA K02245 comGC; competence protein ComGC
D SAMEA4384339_1432 comGD; Late competence protein ComGD, access of DNA to ComEA K02246 comGD; competence protein ComGD
D SAMEA4384339_1543 comC; Late competence protein ComC, processing protease K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SAMEA4384339_0880 Competence transcription factor K02250 comK; competence protein ComK
D SAMEA4384339_0699 secA1; protein export cytoplasm protein SecA ATPaseRNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SAMEA4384339_1524 secD; Protein-export membrane protein secD / Protein-export membrane protein secF K12257 secDF; SecD/SecF fusion protein
D SAMEA4384339_0479 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SAMEA4384339_0734 protein translocase subunit K03075 secG; preprotein translocase subunit SecG
D SAMEA4384339_2059 secY; Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SAMEA4384339_1123 ffh; Signal recognition particle, subunit FFH/SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SAMEA4384339_1121 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) K03110 ftsY; fused signal recognition particle receptor
D SAMEA4384339_1525 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D SAMEA4384339_1925 oxaI; OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SAMEA4384339_0299 tatAy; Sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D SAMEA4384339_0298 tatC2; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ssim02042]
D SAMEA4384339_0646 ytfL; Hemolysin-like protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SAMEA4384339_0778 yfjD; Hemolysin-like protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SAMEA4384339_2012 yqfA; hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ssim02022]
D SAMEA4384339_1575 phoR; Phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SAMEA4384339_1576 phoP; Alkaline phosphatase synthesis transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SAMEA4384339_1381 srrB; ResE K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D SAMEA4384339_1382 srrA; transcriptional regulator srrA K07775 resD; two-component system, OmpR family, response regulator ResD
D SAMEA4384339_0024 walK; two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SAMEA4384339_0023 vicR; Two-component response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SAMEA4384339_0650 saeS; Sensor histidine protein kinase SaeS (exoprotein expression protein S) K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SAMEA4384339_0651 saeR; Response regulator SaeR K10682 saeR; two-component system, OmpR family, response regulator SaeR
D SAMEA4384339_2435 graS; sensor kinase protein K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SAMEA4384339_2436 yvcP; Two-component response regulator YvcP K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SAMEA4384339_0602 bceS; Two-component sensor histidine kinase BceS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SAMEA4384339_0601 graR; YtsA K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SAMEA4384339_1314 arlS; Two component system histidine kinase ArlS K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SAMEA4384339_1315 arlR; Putative response regulator ArlR K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SAMEA4384339_2197 hssR; heme response regulator HssR K02483 K02483; two-component system, OmpR family, response regulator
D SAMEA4384339_1218 desK; sensor kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SAMEA4384339_1219 narL; two-component response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SAMEA4384339_1805 vraS_2; Sensor histidine kinase VraS K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D SAMEA4384339_1804 vraR_2; Two component transcriptional regulator VraR, LuxR family K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR
D SAMEA4384339_2227 nreB; Two component sensor histidine kinase K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D SAMEA4384339_2226 nreC; Two-component response regulator K07696 nreC; two-component system, NarL family, response regulator NreC
D SAMEA4384339_1736 vraS_1; Two-component sensor protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D SAMEA4384339_1735 vraR_1; Two-component response regulator-like protein K02479 K02479; two-component system, NarL family, response regulator
D SAMEA4384339_0222 lytS; Autolysis histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SAMEA4384339_0223 lytR_1; Autolysis response regulater LytR K07705 lytT; two-component system, LytTR family, response regulator LytT
D SAMEA4384339_1873 agrC; accessory gene regulator C K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SAMEA4384339_1874 agrA; accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
C 02035 Bacterial motility proteins [BR:ssim02035]
D SAMEA4384339_2248 Cysteine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ssim04812]
D SAMEA4384339_1074 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SAMEA4384339_1073 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SAMEA4384339_2512 parB_2; Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SAMEA4384339_0318 parB_1; ParB family partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ssim04147]
D SAMEA4384339_2409 fda; fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SAMEA4384339_0732 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SAMEA4384339_0728 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SAMEA4384339_0729 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SAMEA4384339_1580 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SAMEA4384339_1864 groL; heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SAMEA4384339_1471 dnaK; DnaK protein K04043 dnaK; molecular chaperone DnaK
D SAMEA4384339_0819 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SAMEA4384339_0347 guaB; Inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SAMEA4384339_0493 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D SAMEA4384339_1725 hit; Hit-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SAMEA4384339_2400 ldh2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0193 lctE; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SAMEA4384339_0171 fadK; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SAMEA4384339_0311 3-ketoacyl-CoA thiolase; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SAMEA4384339_2058 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SAMEA4384339_1522 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SAMEA4384339_0817 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SAMEA4384339_0818 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SAMEA4384339_1184 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SAMEA4384339_1193 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SAMEA4384339_1550 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SAMEA4384339_1605 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SAMEA4384339_0985 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SAMEA4384339_1008 pdhD; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1410 Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SAMEA4384339_1395 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SAMEA4384339_0730 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SAMEA4384339_2251 pgm_2; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SAMEA4384339_0331 cobC_1; truncated phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ssim02048]
D SAMEA4384339_0056 hsdR; type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SAMEA4384339_0058 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SAMEA4384339_0057 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SAMEA4384339_1594 adenine-specific methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SAMEA4384339_1909 ydcE; Programmed cell death toxin YdcE K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SAMEA4384339_2315 ndoA; pemK-like family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SAMEA4384339_2316 Growth regulator K07172 mazE; antitoxin MazE
D SAMEA4384339_1910 ydcD; Programmed cell death antitoxin YdcD K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D SAMEA4384339_0227 yoeB; addiction module, toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SAMEA4384339_2275 prevent-host-death family protein K19159 yefM; antitoxin YefM
D SAMEA4384339_0226 yefM; antitoxin YefM K19159 yefM; antitoxin YefM
D SAMEA4384339_1074 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SAMEA4384339_1253 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SAMEA4384339_1252 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SAMEA4384339_1510 iscS_1; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SAMEA4384339_1598 iscS_2; Selenocysteine lyase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ssim01504]
D SAMEA4384339_0328 aadK; aminoglycoside adenyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D SAMEA4384339_0156 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SAMEA4384339_0269 van Willebrand factor A K18346 vanW; vancomycin resistance protein VanW
D SAMEA4384339_0630 mgrA; Transcriptional regulator MgrA (Regulator of autolytic activity) K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D SAMEA4384339_0602 bceS; Two-component sensor histidine kinase BceS K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SAMEA4384339_0601 graR; YtsA K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SAMEA4384339_0790 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SAMEA4384339_0791 dltB; D-alanyl transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SAMEA4384339_0792 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SAMEA4384339_0793 dltD; putative lipoteichoic acid biosynthesis protein K03740 dltD; D-alanine transfer protein
D SAMEA4384339_1257 mprF; FmtC (MrpF) protein involved in methicillin resistance / L-lysine modification of phosphatidylglycerol K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SAMEA4384339_0603 macB_1; ABC transporter ATP-binding protein VraF K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SAMEA4384339_0604 vraG; Bacitracin export permease protein BceB K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SAMEA4384339_0585 bmrA; ABC transporter permease/ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SAMEA4384339_2267 norB_3; integral membrane efflux protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D SAMEA4384339_0283 MarR family regulatory protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SAMEA4384339_0284 mepA; Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified [BR:ssim04990]
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ssim03100]
D SAMEA4384339_0452 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMEA4384339_1766 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMEA4384339_1777 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SAMEA4384339_0450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_1768 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_1060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_0720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SAMEA4384339_0881 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMEA4384339_1712 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMEA4384339_2003 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SAMEA4384339_0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1716 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1759 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1762 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SAMEA4384339_1752 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SAMEA4384339_1753 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMEA4384339_1999 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SAMEA4384339_0020 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMEA4384339_1711 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMEA4384339_2002 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SAMEA4384339_0448 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1713 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1901 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1751 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1749 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1750 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SAMEA4384339_1754 tRNA-His K14226 tRNA-His; tRNA His
D SAMEA4384339_1714 tRNA-His K14226 tRNA-His; tRNA His
D SAMEA4384339_0454 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMEA4384339_1778 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SAMEA4384339_1902 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_1771 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_0449 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_1769 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_1748 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SAMEA4384339_0447 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMEA4384339_1772 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMEA4384339_1998 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SAMEA4384339_1717 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1760 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1765 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1764 tRNA-Met K14230 tRNA-Met; tRNA Met
D SAMEA4384339_1715 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SAMEA4384339_1758 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SAMEA4384339_0451 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMEA4384339_1767 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SAMEA4384339_0882 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_0392 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_1761 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_1763 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_1710 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SAMEA4384339_0446 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMEA4384339_1757 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMEA4384339_1773 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SAMEA4384339_1755 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SAMEA4384339_1756 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SAMEA4384339_2000 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SAMEA4384339_0445 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMEA4384339_1774 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMEA4384339_2001 tRNA-Val K14237 tRNA-Val; tRNA Val
D SAMEA4384339_0403 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0457 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_1779 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_1900 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0453 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_2006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SAMEA4384339_0404 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_1776 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_2005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0458 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0455 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_1899 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SAMEA4384339_0444 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_1775 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_1898 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0405 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0456 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0459 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_2004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SAMEA4384339_0738 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SAMEA4384339_0544 iolS; Oxidoreductase ion channel K06607 iolS; myo-inositol catabolism protein IolS [EC:1.1.1.-]
D SAMEA4384339_0060 gutB_1; dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D SAMEA4384339_2129 odh; Opine dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D SAMEA4384339_2033 curA; Quinone oxidoreductase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D SAMEA4384339_0155 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SAMEA4384339_0828 cdr; Coenzyme A disulfide reductase K08255 cdr; CoA-disulfide reductase [EC:1.8.1.14]
D SAMEA4384339_0335 ahpF; Alkyl hydroperoxide reductase protein F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SAMEA4384339_1374 czcO; thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D SAMEA4384339_1258 msrA1; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SAMEA4384339_1324 msrA_1; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SAMEA4384339_2457 msrA_2; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SAMEA4384339_1323 msrB; methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SAMEA4384339_1782 bcp; putative bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SAMEA4384339_1595 tpx; Thioredoxin peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SAMEA4384339_0336 ahpC; alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SAMEA4384339_0758 OsmC/Ohr family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SAMEA4384339_0192 hmp; Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D SAMEA4384339_1812 ftnA; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D SAMEA4384339_2209 trxB_3; Thioredoxin-disulfide reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SAMEA4384339_2421 Ribonucleotide reductase of class III (anaerobic), activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SAMEA4384339_0164 pflA; Pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SAMEA4384339_1338 rlmL; N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SAMEA4384339_2206 paiA; GNAT family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SAMEA4384339_2237 ytmI; GNAT family acetyltransferase K00680 ytmI; uncharacterized N-acetyltransferase [EC:2.3.1.-]
D SAMEA4384339_1617 acetoin utilization protein K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D SAMEA4384339_2329 yncA; Phosphinothricin N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D SAMEA4384339_1355 pimB; glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D SAMEA4384339_0707 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SAMEA4384339_1112 Dihydroxyacetone kinase family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SAMEA4384339_1454 yqfL; ATP/GTP-binding protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SAMEA4384339_2510 ltrA; reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SAMEA4384339_1996 ABC transporter, permease protein YbbP clustered with maltose/maltodextrin transporter / Tlr1762 protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SAMEA4384339_2013 N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic K11442 K11442; putative uridylyltransferase [EC:2.7.7.-]
D SAMEA4384339_0706 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SAMEA4384339_0467 arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D SAMEA4384339_0735 est_2; Carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D SAMEA4384339_0374 est_1; carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D SAMEA4384339_0968 fmtA_1; FmtA protein involved in methicillin resistance; affects cell wall cross-linking and amidation K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D SAMEA4384339_2482 lactonase drp35 K02352 drp35; lactonase [EC:3.1.1.-]
D SAMEA4384339_2274 pnbA; putative carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SAMEA4384339_2440 Tributyrin esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D SAMEA4384339_1249 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMEA4384339_2182 Putative cytosolic protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMEA4384339_2339 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SAMEA4384339_1488 Hydrolase, HAD subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SAMEA4384339_0016 phosphoesterase, DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SAMEA4384339_0416 ycfH; Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SAMEA4384339_0417 Ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SAMEA4384339_1221 nucH; Thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SAMEA4384339_1204 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMEA4384339_1205 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMEA4384339_0383 sle1; autolysin (N-acetylmuramoyl-L-alanine amidase K22409 sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SAMEA4384339_1003 def_1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SAMEA4384339_1101 def_2; Peptide deformylase-like protein K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SAMEA4384339_2464 icaB; polysaccharide deacetylase K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D SAMEA4384339_0519 mshB; Putative GlcNAc-PI de-N-acetylase family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D SAMEA4384339_0423 yabJ; Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SAMEA4384339_1950 ptpB; Low molecular weight protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D SAMEA4384339_1718 ydeN; Putative hydrolase ydeN K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D SAMEA4384339_2387 amidohydrolase K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D SAMEA4384339_0007 nnrD; sugar kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SAMEA4384339_1967 ATP-grasp domain protein K27344 ldmS; L-aspartate-L-methionine ligase [EC:6.3.2.-]
D SAMEA4384339_0033 copB; cation transporter E1-E2 family ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SAMEA4384339_0177 zosA; cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D SAMEA4384339_1618 acuC; acetoin utilization acuC protein K04768 acuC; acetoin utilization protein AcuC
D SAMEA4384339_1065 bshC; bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D SAMEA4384339_2109 narQ; Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D SAMEA4384339_0263 fdrA; membrane protein FdrA K02381 fdrA; FdrA protein
D SAMEA4384339_1378 fer; Ferredoxin K05337 fer; ferredoxin
D SAMEA4384339_0775 uscU; Iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D SAMEA4384339_1307 norQ; Nitric oxide reductase activation protein NorQ K04748 norQ; nitric oxide reductase NorQ protein
D SAMEA4384339_0542 merA; Pyridine nucleotide-disulfide oxidoreductase family protein K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D SAMEA4384339_0695 EDD, DegV family domain protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SAMEA4384339_1325 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SAMEA4384339_0676 nrdI; Nrdi K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D SAMEA4384339_1076 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SAMEA4384339_2465 icaC_2; intercellular adhesion protein icaC K21462 icaC; probable poly-beta-1,6-N-acetyl-D-glucosamine export protein
C 99987 Cofactor metabolism
D SAMEA4384339_2101 mobB; putative molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D SAMEA4384339_2309 mhqO_2; dioxygenase K15975 K15975; glyoxalase family protein
D SAMEA4384339_1677 DoxX family protein K15977 K15977; putative oxidoreductase
D SAMEA4384339_2308 phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D SAMEA4384339_1328 bacillithiol system oxidoreductase, YphP/YqiW family K26958 brxA_B; bacilliredoxin
D SAMEA4384339_1406 bacillithiol system oxidoreductase, YphP/YqiW family K26958 brxA_B; bacilliredoxin
D SAMEA4384339_0687 bacillithiol system protein YtxJ K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SAMEA4384339_1301 cspA; CSD family cold shock protein K03704 cspA; cold shock protein
D SAMEA4384339_0845 spxA_2; arsenate reductase family protein K16509 spxA; regulatory protein spx
D SAMEA4384339_1904 yhgF; Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D SAMEA4384339_0813 yugI_2; general stress protein 13 K07570 GSP13; general stress protein 13
D SAMEA4384339_0434 yugI_1; RNA binding protein, contains ribosomal protein S1 domain K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D SAMEA4384339_0466 Nucleotide excision repair protein, with UvrB/UvrC motif K19411 mcsA; protein arginine kinase activator
D SAMEA4384339_1557 tig; trigger factor (prolyl isomerase) K03545 tig; trigger factor
D SAMEA4384339_2119 ureE; Urease accessory protein UreE K03187 ureE; urease accessory protein
D SAMEA4384339_2120 ureF; Urease accessory protein UreF K03188 ureF; urease accessory protein
D SAMEA4384339_2121 ureG; Urease accessory protein UreG K03189 ureG; urease accessory protein
D SAMEA4384339_2122 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D SAMEA4384339_0737 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SAMEA4384339_0846 mecA; Negative regulator of genetic competence MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SAMEA4384339_1542 DNA repair RadC family protein K03630 radC; DNA repair protein RadC
D SAMEA4384339_0038 truncated DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SAMEA4384339_0552 endonuclease III domain protein K07457 K07457; endonuclease III related protein
D SAMEA4384339_0413 GIY-YIG catalytic domain-containing protein K07461 K07461; putative endonuclease
D SAMEA4384339_1133 smf; DNA processing protein K04096 smf; DNA processing protein
D SAMEA4384339_1350 dnaD; Chromosome replication initiation protein dnaD K02086 dnaD; DNA replication protein
D SAMEA4384339_1197 terminase small subunit K07474 xtmA; phage terminase small subunit
D SAMEA4384339_0363 putative phage terminase K07474 xtmA; phage terminase small subunit
D SAMEA4384339_1198 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit
D SAMEA4384339_1514 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D SAMEA4384339_0356 DNA primase K06919 K06919; putative DNA primase/helicase
D SAMEA4384339_0877 transposase K07482 K07482; transposase, IS30 family
D SAMEA4384339_1405 transposase K07482 K07482; transposase, IS30 family
D SAMEA4384339_1822 transposase K07482 K07482; transposase, IS30 family
D SAMEA4384339_0212 transposase K07482 K07482; transposase, IS30 family
D SAMEA4384339_0531 transposase K07482 K07482; transposase, IS30 family
D SAMEA4384339_0714 tnp_2; transposase for ISSha1 K07485 K07485; transposase
D SAMEA4384339_0757 transposase K07485 K07485; transposase
D SAMEA4384339_1171 transposase K07485 K07485; transposase
D SAMEA4384339_1339 tnp_3; transposase for ISSha1 K07485 K07485; transposase
D SAMEA4384339_1538 transposase K07485 K07485; transposase
D SAMEA4384339_1897 transposase K07485 K07485; transposase
D SAMEA4384339_2051 transposase K07485 K07485; transposase
D SAMEA4384339_2190 tnp_4; transposase for ISSha1 K07485 K07485; transposase
D SAMEA4384339_2336 tnp_6; transposase for ISSha1 K07485 K07485; transposase
D SAMEA4384339_0185 transposase for ISSps1 K07485 K07485; transposase
D SAMEA4384339_0843 ISSep3-like transposase, putative K07486 K07486; transposase
D SAMEA4384339_2320 ISSep3-like transposase, putative K07486 K07486; transposase
D SAMEA4384339_0281 ISSep3-like transposase, putative K07486 K07486; transposase
D SAMEA4384339_0339 ISSep3-like transposase, putative K07486 K07486; transposase
D SAMEA4384339_2204 tnp_5; IS1272 transposase K07487 K07487; transposase
D SAMEA4384339_1679 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SAMEA4384339_0401 putative DNA-binding protein, YbaB family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SAMEA4384339_1230 lysP_1; gamma-aminobutyrate permease K03293 TC.AAT; amino acid transporter, AAT family
D SAMEA4384339_2146 yifK; putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D SAMEA4384339_2401 aroP_2; amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SAMEA4384339_0160 steT; amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SAMEA4384339_2090 swrC; RND multidrug efflux transporter; Acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D SAMEA4384339_2423 citN; citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D SAMEA4384339_2420 betT; High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D SAMEA4384339_0673 yjdL; Di/tripeptide permease YjdL K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SAMEA4384339_0606 pitA; low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D SAMEA4384339_0375 Sodium/neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D SAMEA4384339_0862 Sodium/proton-dependent alanine carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SAMEA4384339_1254 Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SAMEA4384339_0137 brnQ_1; branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SAMEA4384339_0244 brnQ_2; branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SAMEA4384339_2151 sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D SAMEA4384339_2487 citT_2; 2-oxoglutarate/malate translocator-like protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D SAMEA4384339_0430 ytgP_1; export protein for polysaccharides and teichoic acids K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D SAMEA4384339_0221 scdA; DnrN K07322 ytfE; regulator of cell morphogenesis and NO signaling
D SAMEA4384339_1495 allophanate hydrolase subunit 2 K06350 kipA; antagonist of KipI
D SAMEA4384339_1496 kipI_2; Kinase autophosphorylation inhibitor K06351 kipI; inhibitor of KinA
D SAMEA4384339_0044 ccrB; cassette chromosome recombinase B K06400 spoIVCA; site-specific DNA recombinase
D SAMEA4384339_0424 spoVG; regulatory protein SpoVG K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D SAMEA4384339_1021 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D SAMEA4384339_1462 ybeZ; Phoh K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SAMEA4384339_2503 RND efflux transporter K02005 ABC.CD.TX; HlyD family secretion protein
D SAMEA4384339_1553 hemX; HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase hemA K02497 hemX; HemX protein
D SAMEA4384339_2192 tcaA_2; Teicoplanin resistance associated membrane protein TcaA K21463 tcaA; membrane-associated protein TcaA
D SAMEA4384339_0110 tcaA_1; TcaA protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D SAMEA4384339_1283 phoU; Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SAMEA4384339_0848 putative competence protein K06198 coiA; competence protein CoiA
D SAMEA4384339_1625 pheT_2; tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein
D SAMEA4384339_0852 yjbI; globin family protein K06886 glbN; hemoglobin
D SAMEA4384339_2356 ydgH; Putative antibiotic transport-associated protein K06994 K06994; putative drug exporter of the RND superfamily
D SAMEA4384339_2172 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D SAMEA4384339_1063 yfnB; haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D SAMEA4384339_1401 yjjG; HAD-superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D SAMEA4384339_0556 hdl_IVa; L-2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D SAMEA4384339_0776 Scaffold protein sufB K09014 sufB; Fe-S cluster assembly protein SufB
D SAMEA4384339_0773 sufD; Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SAMEA4384339_1788 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D SAMEA4384339_2014 ydjM; membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D SAMEA4384339_1803 yihY; Ribonuclease BN K07058 K07058; membrane protein
D SAMEA4384339_2483 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D SAMEA4384339_2393 Phnb K04750 phnB; PhnB protein
D SAMEA4384339_1903 Metallopeptidase, SprT family K03095 sprL; SprT-like protein
D SAMEA4384339_2449 putative phage infection-like protein K01421 yhgE; putative membrane protein
D SAMEA4384339_0771 membrane protein K08974 K08974; putative membrane protein
D SAMEA4384339_1029 membrane spanning protein K08976 K08976; putative membrane protein
D SAMEA4384339_1914 Putative membrane spanning protein K08981 K08981; putative membrane protein
D SAMEA4384339_2265 yagU_2; periplasmic secreted protein K08996 yagU; putative membrane protein
D SAMEA4384339_0129 yagU_1; integral membrane protein K08996 yagU; putative membrane protein
D SAMEA4384339_0100 phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
C 99997 Function unknown
D SAMEA4384339_0548 Deoxyguanosinetriphosphate triphosphohydrolase K06885 K06885; uncharacterized protein
D SAMEA4384339_0308 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D SAMEA4384339_0500 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D SAMEA4384339_0608 transporter K06890 K06890; uncharacterized protein
D SAMEA4384339_0638 putative DUF296-containing protein K06934 K06934; uncharacterized protein
D SAMEA4384339_1924 yedJ; HD domain-containing protein K06950 K06950; uncharacterized protein
D SAMEA4384339_0340 tcyP; proton/sodium-glutamate symport protein K06956 K06956; uncharacterized protein
D SAMEA4384339_0477 yacP-like NYN domain protein K06962 K06962; uncharacterized protein
D SAMEA4384339_1357 Neutral zinc metallopeptidase family K06973 K06973; uncharacterized protein
D SAMEA4384339_2312 acetyltransferase K06975 K06975; uncharacterized protein
D SAMEA4384339_2448 cocE; acyl esterase K06978 K06978; uncharacterized protein
D SAMEA4384339_2379 putative glyoxalase K07032 K07032; uncharacterized protein
D SAMEA4384339_1747 pfoS_R; Regulatory protein K07035 K07035; uncharacterized protein
D SAMEA4384339_2375 membrane spanning protein K07035 K07035; uncharacterized protein
D SAMEA4384339_2384 amidohydrolase K07045 K07045; uncharacterized protein
D SAMEA4384339_0723 Cell division inhibitor K07071 K07071; uncharacterized protein
D SAMEA4384339_1868 nitroreductase family protein K07078 K07078; uncharacterized protein
D SAMEA4384339_0781 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D SAMEA4384339_1596 yfcA; membrane protein K07090 K07090; uncharacterized protein
D SAMEA4384339_1057 putative metallophosphoesterase K07095 K07095; uncharacterized protein
D SAMEA4384339_1880 yeeE; transport system permease K07112 K07112; uncharacterized protein
D SAMEA4384339_1548 Putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D SAMEA4384339_1392 acr1; putative short chain dehydrogenase K07124 K07124; uncharacterized protein
D SAMEA4384339_1644 Fe-S oxidoreductase K07139 K07139; uncharacterized protein
D SAMEA4384339_1671 yidD; Putative cytosolic protein K08998 K08998; uncharacterized protein
D SAMEA4384339_0615 Protein of uncharacterised function (DUF402) K09145 K09145; uncharacterized protein
D SAMEA4384339_1913 membrane spanning protein K09167 K09167; uncharacterized protein
D SAMEA4384339_0613 cupin superfamily protein K09705 K09705; uncharacterized protein
D SAMEA4384339_1386 Putative cytosolic protein K09763 K09763; uncharacterized protein
D SAMEA4384339_0625 yaiI; YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D SAMEA4384339_2411 YciI-like protein K09780 K09780; uncharacterized protein
D SAMEA4384339_1122 Signal recognition particle associated protein K09787 K09787; uncharacterized protein
D SAMEA4384339_0116 ybaN; membrane spanning protein K09790 K09790; uncharacterized protein
D SAMEA4384339_0618 putative glycine-zipper protein K09793 K09793; uncharacterized protein
D SAMEA4384339_1288 cvfB; S1 RNA binding domain protein K00243 K00243; uncharacterized protein
D SAMEA4384339_0371 Uncharacterized protein conserved in bacteria K09822 K09822; uncharacterized protein
D SAMEA4384339_2130 Uncharacterized protein conserved in bacteria K09940 K09940; uncharacterized protein
D SAMEA4384339_1242 Uncharacterised protein family (UPF0154) K09976 K09976; uncharacterized protein
D SAMEA4384339_2460 ydhG; Uncharacterized conserved protein K05937 K05937; uncharacterized protein
D SAMEA4384339_1533 Predicted ribosomal protein K07584 ysxB; uncharacterized protein
D SAMEA4384339_0605 phosphate transport regulator, putative K07220 K07220; uncharacterized protein
D SAMEA4384339_1786 Putative cytosolic protein K07586 ygaC; uncharacterized protein
D SAMEA4384339_1151 nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024