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Transcription Machinery - Saccharolobus solfataricus P2
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
E SSO0446 TFB-1; Transcription initiation factor IIB (TFIIB) homolog (TFB-1) K03124 TFIIB; transcription initiation factor TFIIB
E SSO0946 TFB-2; Transcription initiation factor IIB (TFIIB) homolog (TFB-2) K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E SSO0951 tfIID; TATA box binding protein, hypothetical (tfIID) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIE
E SSO0266 tfE; Transcription Factor E (TFE), TFIIE alpha subunit homolog (tfE) K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFIIF
D TFIIH
E SSO0313 DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E SSO5798 rpoE2; DNA-directed RNA polymerase, subunit E'' (rpoE2) K15171 SUPT4H1; transcription elongation factor SPT4
E SSO0347 nusG; Transcription termination antitermination factor (nusG) K15172 SUPT5H; transcription elongation factor SPT5
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
E SSO1046 Conserved hypothetical protein K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
E SSO0951 tfIID; TATA box binding protein, hypothetical (tfIID) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
E SSO0951 tfIID; TATA box binding protein, hypothetical (tfIID) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
E SSO5798 rpoE2; DNA-directed RNA polymerase, subunit E'' (rpoE2) K15171 SUPT4H1; transcription elongation factor SPT4
E SSO0347 nusG; Transcription termination antitermination factor (nusG) K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
E SSO0220 nusA; Transcription termination factor nusA homolog, putative (nusA) K02600 nusA; transcription termination/antitermination protein NusA
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
E SSO0225 rpoA1; DNA-directed RNA polymerase, subunit A' (rpoA1) K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
E SSO0223 rpoA2; DNA-directed RNA polymerase, subunit A'' (rpoA2) K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
E SSO0227 rpoB1; DNA-directed RNA polymerase, subunit B' (rpoB1) K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
E SSO3254 rpoB2; DNA-directed RNA polymerase, subunit B'' (rpoB2) K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
E SSO0071 rpoD; DNA-directed RNA polymerase, subunit D (rpoD) K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
E SSO0415 rpoE1; DNA-directed RNA polymerase, subunit E' (rpoE1) K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
E SSO0277 rpoG; DNA-directed RNA polymerase, subunit G (rpoG) K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
E SSO5468 rpoH; DNA-directed RNA polymerase, subunit H (rpoH) K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
E SSO6768 rpoK; DNA-directed RNA polymerase subunit K (rpoK) K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
E SSO5577 rpoL; DNA-directed RNA polymerase, subunit L (rpoL) K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
E SSO5140 rpoN; DNA-directed RNA polymerase, subunit N (rpoN) K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
E SSO5865 rpoP; DNA-directed RNA polymerase, subunit P (rpoP) K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
E SSO0396 Hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
C Basal transcription factors
D TFB
E SSO0446 TFB-1; Transcription initiation factor IIB (TFIIB) homolog (TFB-1) K03124 TFIIB; transcription initiation factor TFIIB
E SSO0946 TFB-2; Transcription initiation factor IIB (TFIIB) homolog (TFB-2) K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E SSO0266 tfE; Transcription Factor E (TFE), TFIIE alpha subunit homolog (tfE) K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
E SSO0291 rpoM-1; DNA-directed RNA polymerase, subunit M (rpoM-1) K03057 tfs; transcription factor S
E SSO0605 Zn finger protein, hypothetical K03057 tfs; transcription factor S
E SSO5576 rpoM-like; DNA-directed RNA polymerase, putative subunit M (rpoM-like) K03057 tfs; transcription factor S
E SSO9221 rpoM-2; DNA-directed RNA polymerase, subunit M (rpoM-2) K03057 tfs; transcription factor S
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 17, 2025