+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptococcus parauberis
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D STP_0361 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C STP_0315 era; GTP-binding protein K03595 era; GTPase
C STP_1012 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C STP_0233 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
C STP_0157 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
C STP_1747 transcription antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D STP_1016 ribosomal small subunit pseudouridine synthase B K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D STP_1074 putative 16S pseudouridylate synthetase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D STP_1673 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D STP_1240 16S rRNA m(5)C 967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D STP_0790 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D STP_1150 methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D STP_1506 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D STP_1384 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D STP_0272 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D STP_1317 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
C 23S rRNA modification factors
D STP_1465 SpoU rRNA methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D STP_1866 SPOUT methyltransferase superfamily protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D STP_0545 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D STP_1138 radical SAM superfamily protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D STP_1034 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D STP_1358 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D STP_0560 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D STP_0666 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D STP_1752 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C STP_0944 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C STP_1649 acetyltransferase (GNAT) family protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C STP_0575 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
C STP_1507 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C STP_0361 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C STP_1789 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C STP_1467 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C STP_1085 DEAD box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C STP_0276 helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C STP_0315 era; GTP-binding protein K03595 era; GTPase
C STP_1670 engC; putative GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C STP_1376 engA; GTP-binding protein EngA K03977 engA; GTPase
C STP_1012 GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
C STP_0762 GTPase protein K14540 rbgA; ribosome biogenesis GTPase A
C STP_0985 GTPase K03665 hflX; GTPase
C STP_1399 GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C STP_0685 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C STP_1498 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C STP_0237 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C STP_0232 hypothetical protein K09748 rimP; ribosome maturation factor RimP
C STP_1859 putative cytoplasmic protein K14761 rlbA; ribosome-associated protein
C STP_1396 hypothetical protein K09710 ybeB; ribosome-associated protein
C STP_0313 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C STP_1227 sigma 54 modulation protein / S30EA ribosomal protein K05808 hpf; ribosome hibernation promoting factor
C STP_0005 GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
C STP_1381 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025