+D Transcription factors KO
#
Transcription Factors - Streptomyces sp. 4F
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D ASR50_13895 5-methylcytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ASR50_13900 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D ASR50_17310 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Stork head/winged helix factors
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG TOX
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D ASR50_33890 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D ASR50_28160 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D ASR50_28975 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
C LysR family
D ASR50_22975 hydrogen peroxide-inducible protein activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D ASR50_04335 chromosome replication initiation inhibitor protein K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
C DeoR family
D ASR50_33860 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D ASR50_09235 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D ASR50_19305 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D ASR50_34005 decarboxylase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D ASR50_02795 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_03050 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_05375 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_09535 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_13300 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_13340 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_18050 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_30835 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_32265 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D ASR50_07845 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ASR50_10850 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D ASR50_21685 LacI family transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
D ASR50_30985 LacI family transcriptional regulator K17640 bxlR; LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
C GntR family
D ASR50_23865 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D ASR50_26950 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator
D ASR50_12970 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ASR50_12985 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ASR50_15985 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ASR50_17350 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ASR50_30745 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ASR50_33315 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D ASR50_20355 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D ASR50_22115 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D ASR50_30615 TetR family transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D ASR50_07455 TetR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
D ASR50_05980 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D ASR50_11240 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D ASR50_13940 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D ASR50_25560 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D ASR50_06175 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ASR50_06750 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D ASR50_20620 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D ASR50_28325 response regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D ASR50_27975 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D ASR50_30210 DNA-binding protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D ASR50_14450 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D ASR50_08130 transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D ASR50_15650 heat-shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D ASR50_14925 transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D ASR50_26740 transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D ASR50_28740 transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
C Fur family
D ASR50_12105 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ASR50_18110 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ASR50_31655 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D ASR50_03665 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D ASR50_23690 Fur family transcriptional regulator K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D ASR50_28635 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D ASR50_33300 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D ASR50_11805 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D ASR50_15190 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
D ASR50_10905 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D ASR50_31355 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D ASR50_31380 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D ASR50_33955 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D ASR50_01740 hypothetical protein K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor
C XRE family
D ASR50_26050 XRE family transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
C Other families
D ASR50_18965 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D ASR50_22585 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D ASR50_20290 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D ASR50_05400 transcriptional regulator K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D ASR50_04350 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_15220 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_20150 transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_21795 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_23040 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_23880 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_30260 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_23595 DNA-binding protein K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D ASR50_17925 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D ASR50_08570 transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D ASR50_28815 PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D ASR50_16820 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D ASR50_18350 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D ASR50_07505 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D ASR50_12325 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D ASR50_05555 PaaX domain-containing protein, C-domain protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D ASR50_27045 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D ASR50_07025 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D ASR50_06415 transcriptional regulator K07734 paiB; transcriptional regulator
D ASR50_14260 hypothetical protein K07735 algH; putative transcriptional regulator
D ASR50_10125 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor
D ASR50_26235 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 21, 2025
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Classification taken and modified from TRANSFAC 7.0