+E Transcription factors KO
#
Transcription Factors - Streptococcus sp. VT 162
%
!
AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D V470_04485 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
C LysR family
C DeoR family
D V470_05035 DeoR faimly transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D V470_06345 DeoR faimly transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D V470_00595 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V470_01060 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V470_02020 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V470_07515 LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
C GntR family
D V470_01515 GntR family transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D V470_05280 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
D V470_04675 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D V470_09270 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D V470_01645 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
C Fur family
C IclR family
C CRP/FNR family
C Rrf2 family
C ArsR family
D V470_00495 ArsR family transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
C PadR family
D V470_09390 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D V470_07345 MarR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D V470_01895 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D V470_09580 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D V470_04410 MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D V470_06520 XRE family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D V470_01165 purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D V470_04310 Rex family transcripional regulator K01926 rex; redox-sensing transcriptional repressor
D V470_07030 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D V470_00550 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D V470_01485 DNA-binding protein K07729 K07729; putative transcriptional regulator
D V470_03065 transcriptional regulator K07729 K07729; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
D V470_00715 regulator K03491 licR; probable licABCH operon transcriptional regulator
C Others
D V470_00035 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D V470_05055 transcription antiterminator lact K02531 lacT; transcriptional antiterminator
D V470_09140 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D V470_05380 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D V470_03955 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D V470_01690 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D V470_06830 transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D V470_09590 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D V470_06235 phosphoribosyl transferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D V470_02360 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D V470_00950 transcriptional regulator K12296 comX1_2; competence protein ComX
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
#
Classification taken and modified from TRANSFAC 7.0