+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Saccharolobus sp. E5-1-F

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D GFS03_07215 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D GFS03_06665 RNA-protein complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins D GFS03_07915 ribosomal biogenesis protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 C Helicases C GTPase C RNase C Kinase C Other 90S particles D GFS03_01750 16S rRNA methyltransferase K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D GFS03_02400 RNA-processing protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D GFS03_02405 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D GFS03_10630 phosphotransferase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D GFS03_09250 AAA family ATPase K18532 AK6; adenylate kinase [EC:2.7.4.3] D GFS03_08955 DUF367 family protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D GFS03_10155 ribosome biogenesis/translation initiation ATPase RLI K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D GFS03_08605 GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E GFS03_08010 ribonuclease P K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E GFS03_07880 ribonuclease P K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E GFS03_07875 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D GFS03_07615 GTPase K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D GFS03_09845 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D GFS03_02435 NMD protein affecting ribosome stability and mRNA decay K07562 NMD3; 60S ribosomal export protein NMD3 D GFS03_07890 ribosome assembly factor SBDS K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D GFS03_09475 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D GFS03_10740 CDC48 family AAA ATPase K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles B Other ribosome biogenesis factors # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D GFS03_07215 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D GFS03_07210 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase K04795 flpA; fibrillarin-like pre-rRNA processing protein D GFS03_11115 50S ribosomal protein L7ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D GFS03_06665 RNA-protein complex protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C GFS03_10500 NusA-like transcription termination signal-binding factor K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D GFS03_07835 16S ribosomal RNA methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D GFS03_09735 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D GFS03_10965 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] C 23S rRNA modification factors B ribosomal protein modification factors C GFS03_10565 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C GFS03_11155 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] B rRNA processing factors C GFS03_06485 DUF402 domain-containing protein K22469 fau-1; ribonuclease FAU-1 [EC:3.1.26.-] B rRNA helicases B GTPases C GFS03_10245 hflX; GTPase HflX K03665 hflX; GTPase B Other maturation factors C GFS03_08435 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C GFS03_01740 RNA-binding protein K07574 yhbY; RNA-binding protein C GFS03_07860 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2025