+E Transcription factors KO #

  Transcription Factors - Streptomyces violaceoruber

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D B1H20_26190 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D B1H20_30295 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D B1H20_29205 AraC family transcriptional regulator K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D B1H20_00255 AraC family transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA C LysR family D B1H20_23515 hydrogen peroxide-inducible protein activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D B1H20_00200 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator C DeoR family D B1H20_28025 alkaline phosphatase K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D B1H20_33420 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D B1H20_00485 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D B1H20_05155 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D B1H20_18975 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D B1H20_10760 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D B1H20_01970 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D B1H20_30920 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D B1H20_08010 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family D B1H20_24530 GntR family transcriptional regulator K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator D B1H20_08060 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B1H20_09330 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B1H20_09455 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B1H20_11330 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B1H20_15850 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D B1H20_32155 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D B1H20_03205 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B1H20_07885 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D B1H20_22395 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D B1H20_15890 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D B1H20_26905 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D B1H20_04775 TetR family transcriptional regulator K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D B1H20_13175 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D B1H20_03055 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D B1H20_08520 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D B1H20_06970 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D B1H20_15435 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D B1H20_06435 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response C Lrp/AsnC family D B1H20_26755 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D B1H20_04060 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B1H20_09105 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B1H20_13870 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D B1H20_13645 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D B1H20_29360 transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D B1H20_24025 DNA-binding response regulator K24912 ramR; LuxR family transcriptional regulator, transcriptional activator for aerial hyphae formation C MarR family D B1H20_21980 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D B1H20_23660 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D B1H20_00340 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D B1H20_05460 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D B1H20_15745 heat-shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D B1H20_23805 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D B1H20_32070 transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D B1H20_09700 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D B1H20_19035 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D B1H20_24420 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D B1H20_02715 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family D B1H20_29575 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D B1H20_08455 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor C CRP/FNR family D B1H20_15075 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D B1H20_18090 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D B1H20_24615 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D B1H20_19225 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D B1H20_25595 hypothetical protein K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor C XRE family D B1H20_03610 Cro/Cl family transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D B1H20_00985 Cro/Cl family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D B1H20_27240 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family D B1H20_13480 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D B1H20_20530 dihydrofolate reductase K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D B1H20_22980 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D B1H20_05830 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D B1H20_20080 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D B1H20_30755 transcriptional regulator K27097 espR; ESX-1-secreted protein regulator D B1H20_22685 transcriptional regulator K27097 espR; ESX-1-secreted protein regulator D B1H20_11425 transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D B1H20_23605 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_01670 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_15105 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_24570 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_16780 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_12285 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_22130 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_31355 transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_24325 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D B1H20_18800 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D B1H20_05905 transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D B1H20_09500 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D B1H20_09505 hypothetical protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D B1H20_17200 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D B1H20_19280 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D B1H20_04810 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D B1H20_09810 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D B1H20_28100 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D B1H20_04350 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D B1H20_00035 transcriptional regulator K07734 paiB; transcriptional regulator D B1H20_11880 DUF179 domain-containing protein K07735 algH; putative transcriptional regulator D B1H20_07260 DNA-binding protein K06204 dksA; RNA polymerase-binding transcription factor D B1H20_27455 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0