+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Shewanella woodyi

% ! AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D Swoo_4919 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E Swoo_1243 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D Swoo_1084 band 7 protein K07192 FLOT; flotillin C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D Swoo_3237 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D Swoo_3110 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Swoo_4353 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D Swoo_2068 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Swoo_2312 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D Swoo_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Swoo_0350 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D Swoo_0504 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Swoo_4170 RNA chaperone Hfq K03666 hfq; host factor-I protein D Swoo_2173 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Swoo_2484 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_0461 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_0243 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Swoo_2785 37kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D Swoo_2849 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Swoo_2909 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Swoo_2908 segregation and condensation protein B K06024 scpB; segregation and condensation protein B C Divisome proteins D Swoo_4530 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Swoo_3349 Septum formation initiator K05589 ftsB; cell division protein FtsB D Swoo_0202 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Swoo_4539 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Swoo_2483 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Swoo_4540 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Swoo_4428 Sporulation domain protein K03591 ftsN; cell division protein FtsN D Swoo_4531 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Swoo_4534 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Swoo_0203 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Swoo_4529 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Swoo_2848 cell division protein ZipA K03528 zipA; cell division protein ZipA D Swoo_3974 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Swoo_0402 protein of unknown function DUF904 K09892 zapB; cell division protein ZapB D Swoo_2142 protein of unknown function DUF1379 K18657 zapC; cell division protein ZapC D Swoo_0301 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Swoo_4223 AFG1-family ATPase K06916 zapE; cell division protein ZapE D Swoo_0734 AFG1-family ATPase K06916 zapE; cell division protein ZapE D Swoo_4173 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Swoo_0131 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1356 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_2179 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_0466 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1830 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Swoo_1365 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D Swoo_2114 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Swoo_2113 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Swoo_4628 hypothetical protein K03609 minD; septum site-determining protein MinD D Swoo_2112 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Swoo_0179 conserved hypothetical protein K13053 sulA; cell division inhibitor SulA D Swoo_4564 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D Swoo_2274 SeqA family protein K03645 seqA; negative modulator of initiation of replication D Swoo_4402 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Swoo_4401 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Swoo_4400 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Swoo_3709 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Swoo_1769 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Swoo_1641 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Swoo_4907 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Swoo_1535 conserved hypothetical protein K03496 parA; chromosome partitioning protein D Swoo_4906 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Swoo_4188 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Swoo_4190 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Swoo_4909 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Swoo_4908 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Swoo_0489 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Swoo_0895 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Swoo_1978 ATP-binding protein, Mrp/Nbp35 family K03593 mrp; ATP-binding protein involved in chromosome partitioning D Swoo_0058 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024