+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Syntrophomonas wolfei
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ACRISPR-Cas system
B Universal Cas proteins
C Swol_1749 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C Swol_2516 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C Swol_0480 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C Swol_1803 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
C Swol_2515 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
C Swol_0481 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
C Swol_1748 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
C Swol_1802 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D Swol_1805 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Swol_0475 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Swol_2518 helicases-like protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D Swol_0479 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1804 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_2517 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1809 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Swol_1751 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D Swol_2522 CRISPR-associated protein, Csh1 family K19114 csh1; CRISPR-associated protein Csh1
D Swol_1808 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1
D Swol_2520 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D Swol_1807 conserved hypothetical protein K19115 csh2; CRISPR-associated protein Csh2
D Swol_0479 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1804 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_2517 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1806 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h
D Swol_2519 CRISPR-associated protein, Cas5h family K19116 cas5h; CRISPR-associated protein Cas5h
C Subtype I-C factors
D Swol_0477 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Swol_0478 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Swol_0479 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1804 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_2517 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_0476 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d
C Subtype I-D factors
D Swol_0479 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1804 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_2517 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1809 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Swol_1751 CRISPR-associated protein, Cas6 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
D Swol_2527 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D Swol_0479 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_1804 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Swol_2517 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
D Swol_1756 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
C Subtype III-A factors
D Swol_1755 hypothetical protein K19138 csm2; CRISPR-associated protein Csm2
D Swol_1754 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Swol_1753 CRISPR-associated protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Swol_1752 CRISPR-associated protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C Swol_0516 type I restriction-modification system R subunit (endonuclease) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Swol_2256 type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C Swol_2257 Restriction endonuclease S subunits-like protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Swol_0515 type I restriction-modification system (specificity subunit) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C Swol_0512 type I restriction modification system M subunit (site-specific DNA-methyltransferase subunit) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C Swol_2258 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D Swol_0503 Site-specific DNA methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Swol_0838 Site-specific DNA-methyltransferase (adenine-specific) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
B Type III R-M system
C Swol_1547 type III restriction system endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
C Swol_1462 DNA or RNA helicases of superfamily II-like protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
C Swol_1548 site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
C Swol_1463 Adenine specific DNA methylase Mod-like protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
C Swol_2196 Hnh endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
C Swol_1116 GTPase subunit of restriction endonuclease-like protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
C Swol_0993 Restriction endonuclease-like protein K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D Swol_1876 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Swol_1879 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Swol_1877 transcriptional regulator/antitoxin, MazE K07172 mazE; antitoxin MazE
D Swol_1880 putative transcriptional regulator, CopG family K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
C ChpB-ChpS
C YhaV-PrlF
D Swol_1976 regulators of stationary/sporulation gene expression K19156 prlF; antitoxin PrlF
C RelE/StbE-RelB/StbD
D Swol_0286 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
C YafQ-dinJ
D Swol_1075 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D Swol_1074 putative DNA-damage-inducibile protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_0393 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_0150 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D Swol_1183 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
D Swol_0432 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Swol_0392 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D Swol_0433 prevent-host-death protein K19159 yefM; antitoxin YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
D Swol_0151 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_1411 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_1971 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_0496 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D Swol_0577 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
C Doc-Phd
D Swol_2275 death-on-curing protein K07341 doc; death on curing protein
C HigB-HigA
D Swol_0482 hypothetical protein K07334 higB-1; toxin HigB-1
D Swol_0483 putative plasmid maintenance system antidote protein, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D Swol_0833 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Swol_1641 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_2374 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Swol_0930 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C Swol_0746 conserved hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023