+D #

  Transfer RNA Biogenesis - Synechococcus sp. WH 8109

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors D Syncc8109_2226 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] C CCA adding factors D Syncc8109_2501 poly A polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D Syncc8109_2178 glutamyl-tRNA synthetase-like protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Syncc8109_0761 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Syncc8109_0284 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Syncc8109_1285 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Syncc8109_1328 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Syncc8109_2560 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Syncc8109_0133 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Syncc8109_2660 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D Syncc8109_2599 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Syncc8109_1656 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Syncc8109_0632 serRS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Syncc8109_2066 cysRS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Syncc8109_2635 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Syncc8109_0186 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Syncc8109_1829 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Syncc8109_1323 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Syncc8109_2189 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Syncc8109_1652 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors C AARS associated factors D Syncc8109_2355 HIT (histidine triad) family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D Syncc8109_2090 tRNA (guanine-N(2)-)-methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D Syncc8109_0279 tRNA (guanine-N(7))-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] C Psudouridine synthases D Syncc8109_0355 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Syncc8109_2220 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D Syncc8109_1288 nifS; putative cysteine desulfurase (class-V aminotransferase family) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Syncc8109_2540 nifS; NifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D Syncc8109_0516 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Syncc8109_0113 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Syncc8109_2562 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Syncc8109_2621 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Syncc8109_0184 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D Syncc8109_0628 cysQ; CysQ protein-like protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D Syncc8109_0638 rnpA; ribonuclease P protein component of ribozyme K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Syncc8109_0157 rnpB; rnpB K01978 rnpB; M1 RNA B 3'processing and CCA adding factors C 3'processing factors D Syncc8109_2226 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Syncc8109_0269 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Syncc8109_1326 putative ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Syncc8109_0420 rnd; 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] C CCA adding factors D Syncc8109_2501 poly A polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors B tRNA transport factors C tRNA export factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D Syncc8109_1285 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Syncc8109_0761 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D Syncc8109_2189 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Syncc8109_1652 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Syncc8109_1656 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Syncc8109_0284 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Syncc8109_0133 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Syncc8109_2599 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Syncc8109_2635 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Syncc8109_1328 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Syncc8109_0632 serRS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Syncc8109_2660 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Syncc8109_1899 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Syncc8109_1452 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Syncc8109_2066 cysRS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Syncc8109_2178 glutamyl-tRNA synthetase-like protein K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Syncc8109_2560 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Syncc8109_1829 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Syncc8109_1323 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Syncc8109_0186 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] C Trans-editing factors B tRNA modification factors C Deaminases D Syncc8109_1472 cumB; cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D Syncc8109_0016 uncharacterized protein family UPF0034 K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Syncc8109_2124 Dihydrouridine synthase TIM-barrel protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] C Methylthiotransferases D Syncc8109_1876 miaB; Protein of unknown function UPF0004 K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D Syncc8109_2044 RNA methyltransferase TrmH, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Syncc8109_0958 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Syncc8109_0279 tRNA (guanine-N(7))-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Syncc8109_1840 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Syncc8109_2562 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Syncc8109_1908 tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Syncc8109_1335 spoU; putative tRNA/rRNA methyltransferase (SpoU family) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Syncc8109_1862 spoU; tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family C Psudouridine synthases D Syncc8109_0355 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Syncc8109_2220 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] C Thiolation factors D Syncc8109_1852 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Syncc8109_2461 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein D Syncc8109_1288 nifS; putative cysteine desulfurase (class-V aminotransferase family) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Syncc8109_2540 nifS; NifS-like aminotransferase class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Syncc8109_0225 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D Syncc8109_2621 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Syncc8109_0113 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Syncc8109_0555 tRNA-(MS(2)IO(6)A)-hydroxylase-like protein K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D Syncc8109_2100 queA; queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Syncc8109_2665 exsB; ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Syncc8109_2442 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Syncc8109_1682 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Syncc8109_2663 putative organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Syncc8109_2287 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Syncc8109_0008 4Fe-4S cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Syncc8109_0184 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Syncc8109_1482 Rhodanese-like protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D Syncc8109_0235 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Syncc8109_0081 mesJ; putative MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Syncc8109_2499 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Syncc8109_0516 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Syncc8109_0694 metalloendopeptidase, putative, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Syncc8109_0124 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE B tRNA degradation factors C Syncc8109_1353 zam; RNA binding S1 K12573 rnr; ribonuclease R [EC:3.1.13.1] C Syncc8109_0629 pnp; RNA binding S1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024