+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Synechococcus sp. KORDI-100

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D KR100_01885 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C KR100_11640 GTPase Era K03595 era; GTPase C KR100_13505 hypothetical protein K03595 era; GTPase C KR100_04105 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C KR100_12870 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA C KR100_00865 hypothetical protein K03625 nusB; transcription antitermination protein NusB C KR100_15270 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D KR100_07625 hypothetical protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D KR100_09740 hypothetical protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D KR100_12055 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D KR100_05810 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D KR100_07790 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D KR100_09155 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D KR100_12740 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D KR100_15010 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D KR100_04415 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D KR100_13615 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D KR100_08155 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D KR100_09910 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D KR100_13945 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D KR100_12785 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D KR100_13615 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D KR100_08655 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D KR100_14980 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D KR100_15165 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D KR100_12325 hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] B ribosomal protein modification factors C KR100_07515 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C KR100_01870 hypothetical protein K02860 rimM; 16S rRNA processing protein RimM C KR100_14445 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C KR100_13325 hypothetical protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C KR100_01885 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] C KR100_02975 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C KR100_06185 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C KR100_08145 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C KR100_07365 cold-shock protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C KR100_11640 GTPase Era K03595 era; GTPase C KR100_13505 hypothetical protein K03595 era; GTPase C KR100_00935 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C KR100_12545 engA; GTP-binding protein Der K03977 engA; GTPase C KR100_04105 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C KR100_15170 GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A C KR100_14265 hypothetical protein K03665 hflX; GTPase B Other maturation factors C KR100_03870 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C KR100_15135 guanosine-3'-5'--bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C KR100_14570 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C KR100_12865 hypothetical protein K09748 rimP; ribosome maturation factor RimP C KR100_06525 hypothetical protein K09710 ybeB; ribosome-associated protein C KR100_15080 hypothetical protein K07042 ybeY; probable rRNA maturation factor C KR100_05645 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C KR100_04465 hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 8, 2025