+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Picosynechococcus sp. PCC 7002

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ACRISPR-Cas system B Universal Cas proteins C SYNPCC7002_D0019 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C SYNPCC7002_A1777 cas; putative CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 C SYNPCC7002_F0054 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C SYNPCC7002_D0018 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 C SYNPCC7002_A1778 cas2; CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D SYNPCC7002_A1771 cas3; CRISPR-associated helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D SYNPCC7002_D0025 conserved hypothetical protein, helicase domain K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D SYNPCC7002_A1773 CRISPR-associated regulatory protein, DevR family K19075 cst2; CRISPR-associated protein Cst2 D SYNPCC7002_D0020 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D SYNPCC7002_A1776 conserved hypothetical protein K19090 cas5t; CRISPR-associated protein Cas5t D SYNPCC7002_D0021 CRISPR-associated protein, TM1814 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D SYNPCC7002_D0020 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D SYNPCC7002_D0020 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D SYNPCC7002_D0022 conserved hypothetical protein K19120 csc1; CRISPR-associated protein Csc1 D SYNPCC7002_D0023 conserved hypothetical protein K19121 csc2; CRISPR-associated protein Csc2 D SYNPCC7002_D0024 conserved hypothetical protein K19122 csc3; CRISPR-associated protein Csc3 D SYNPCC7002_D0020 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D SYNPCC7002_D0021 CRISPR-associated protein, TM1814 family K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D SYNPCC7002_D0020 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors D SYNPCC7002_F0048 conserved hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2 D SYNPCC7002_F0047 conserved hypothetical protein K09127 cmr3; CRISPR-associated protein Cmr3 D SYNPCC7002_F0046 conserved hypothetical protein K09000 cmr4; CRISPR-associated protein Cmr4 D SYNPCC7002_F0044 Protein of unknown function (DUF324) K19142 cmr6; CRISPR-associated protein Cmr6 C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C SYNPCC7002_C0006 type I site-specific restriction-modification system, R (restriction) subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C SYNPCC7002_C0004 type 1 restriction-modification system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C SYNPCC7002_C0003 Type I N6 DNA Methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C SYNPCC7002_F0089 Type I restriction modification system, N-6 DNA Methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D SYNPCC7002_A1620 dam; adenine-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SYNPCC7002_A1188 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SYNPCC7002_E0012 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D SYNPCC7002_A0849 site-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C SYNPCC7002_E0035 type III restriction-modification enzyme, R/helicase subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C SYNPCC7002_E0038 DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C SYNPCC7002_A1072 GTPase subunit of Type II restriction endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] C SYNPCC7002_A1001 restriction endonuclease, similarity to Mrr K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D SYNPCC7002_G0085 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D SYNPCC7002_F0009 transcriptional regulator, PemK family K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D SYNPCC7002_F0010 PemI-like protein 2; suppressor of ppGpp-regulated growth inhibitor (ChpA/MazF) K07172 mazE; antitoxin MazE C ChpB-ChpS C YhaV-PrlF D SYNPCC7002_A0406 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD D SYNPCC7002_A2640 addiction module toxin, RelE/StbE family subfamily K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ C YoeB-YefM D SYNPCC7002_A0836 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-] D SYNPCC7002_A0837 probable antitoxin of toxin-antitoxin stability system K19159 yefM; antitoxin YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd D SYNPCC7002_F0075 death-on-curing protein K07341 doc; death on curing protein C HigB-HigA D SYNPCC7002_F0023 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D SYNPCC7002_D0015 conserved hypothetical protein containing helix turn helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D SYNPCC7002_F0024 conserved hypothetical protein with helix-turn-helix domain K18831 higA; HTH-type transcriptional regulator / antitoxin HigA C MqsR-MqsA C VapC-VapB D SYNPCC7002_F0029 conserved hypothetical protein, PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D SYNPCC7002_F0030 conserved hypothetical protein K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D SYNPCC7002_A0055 PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-] D SYNPCC7002_A0056 conserved hypothetical protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D SYNPCC7002_A0024 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SYNPCC7002_A1525 cell shape determining protein, MreB/Mrl family subfamily K03569 mreB; rod shape-determining protein MreB and related proteins D SYNPCC7002_A1394 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C SYNPCC7002_A0787 nifS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C SYNPCC7002_A0921 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023