+E Messenger RNA Biogenesis KO #

  Messenger RNA Biogenesis - Trichoplax adhaerens (placozoan)

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AEukaryotic type B mRNA processing factors C 5' end processing D Capping factors E TRIADDRAFT_30586 hypothetical protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] E TRIADDRAFT_23304 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E TRIADDRAFT_51728 hypothetical protein K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57] E TRIADDRAFT_53500 hypothetical protein K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296] D Cap binding complex E TRIADDRAFT_54475 hypothetical protein K12882 NCBP1; nuclear cap-binding protein subunit 1 E TRIADDRAFT_19119 hypothetical protein K12883 NCBP2; nuclear cap-binding protein subunit 2 C 3' end processing D Pre-mRNA cleavage factor Im (CFIm) E TRIADDRAFT_64225 expressed hypothetical protein K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5 D Pre-mRNA cleavage factor IIm (CFIIm) E TRIADDRAFT_54844 hypothetical protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] D Cleavage and polyadenylation specificity factor (CPSF) complex E TRIADDRAFT_59883 hypothetical protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 E TRIADDRAFT_30006 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E TRIADDRAFT_19764 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E TRIADDRAFT_53642 hypothetical protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 E TRIADDRAFT_60103 hypothetical protein K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 E TRIADDRAFT_26233 hypothetical protein K15542 PFS2; polyadenylation factor subunit 2 E TRIADDRAFT_49741 hypothetical protein K14962 WDR82; COMPASS component SWD2 E TRIADDRAFT_30170 protein phosphatase 1 catalytic subunit gamma isoform K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E TRIADDRAFT_27087 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E TRIADDRAFT_20850 hypothetical protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] E TRIADDRAFT_26378 hypothetical protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] D Cleavage stimulation factor (CSTF) complex E TRIADDRAFT_26681 hypothetical protein K14406 CSTF1; cleavage stimulation factor subunit 1 E TRIADDRAFT_56724 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 E TRIADDRAFT_21977 hypothetical protein K14408 CSTF3; cleavage stimulation factor subunit 3 E TRIADDRAFT_57101 hypothetical protein K06100 SYMPK; symplekin D U7-dependent histone pre-mRNA processing factors E TRIADDRAFT_37531 expressed hypothetical protein K11086 SNRPB; small nuclear ribonucleoprotein B and B' E TRIADDRAFT_8416 hypothetical protein K11088 SNRPD3; small nuclear ribonucleoprotein D3 E TRIADDRAFT_22667 hypothetical protein K11097 SNRPE; small nuclear ribonucleoprotein E E TRIADDRAFT_26794 hypothetical protein K11098 SNRPF; small nuclear ribonucleoprotein F E TRIADDRAFT_38015 expressed hypothetical protein K11099 SNRPG; small nuclear ribonucleoprotein G E TRIADDRAFT_24947 hypothetical protein K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10 E TRIADDRAFT_52963 hypothetical protein K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11 E TRIADDRAFT_30006 hypothetical protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2 E TRIADDRAFT_19764 hypothetical protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] E TRIADDRAFT_56724 hypothetical protein K14407 CSTF2; cleavage stimulation factor subunit 2 E TRIADDRAFT_57101 hypothetical protein K06100 SYMPK; symplekin E TRIADDRAFT_60746 hypothetical protein K18710 SLBP; histone RNA hairpin-binding protein D DRB sensitivity inducing factor (DSIF) complex E TRIADDRAFT_28457 hypothetical protein K15171 SUPT4H1; transcription elongation factor SPT4 E TRIADDRAFT_32870 hypothetical protein K15172 SUPT5H; transcription elongation factor SPT5 D N6-methyltransferase complex E TRIADDRAFT_28751 hypothetical protein K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346] E TRIADDRAFT_56787 hypothetical protein K13190 RBM15; RNA-binding protein 15 D Poly(A) addition factors E TRIADDRAFT_30173 hypothetical protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19] E TRIADDRAFT_54639 hypothetical protein K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19] E TRIADDRAFT_54458 hypothetical protein K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52] D Negative regulators of mRNA 3' end processing E TRIADDRAFT_56265 hypothetical protein K13192 RBM26; RNA-binding protein 26 C Other processing factors D TRIADDRAFT_53665 hypothetical protein K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6] D TRIADDRAFT_19019 hypothetical protein K13102 KIN; DNA/RNA-binding protein KIN17 D TRIADDRAFT_21429 hypothetical protein K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D TRIADDRAFT_20455 hypothetical protein K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-] D TRIADDRAFT_51814 hypothetical protein K23038 ZC3H14; zinc finger CCCH domain-containing protein 14 D TRIADDRAFT_64154 hypothetical protein K27103 SRRT; serrate RNA effector molecule B mRNA surveillance and transport factors C Transport factors D EJC complex E TRIADDRAFT_63736 expressed hypothetical protein K12876 RBM8A; RNA-binding protein 8A E TRIADDRAFT_33631 hypothetical protein K12877 MAGOH; protein mago nashi E TRIADDRAFT_34543 hypothetical protein K12877 MAGOH; protein mago nashi E TRIADDRAFT_53742 hypothetical protein K12881 THOC4; THO complex subunit 4 E TRIADDRAFT_63649 hypothetical protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] E TRIADDRAFT_38398 DEAD box ATP-dependent RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E TRIADDRAFT_56634 hypothetical protein K25178 CCDC174; coiled-coil domain-containing protein 174 E TRIADDRAFT_50312 hypothetical protein K14324 SAP18; histone deacetylase complex subunit SAP18 E TRIADDRAFT_59793 hypothetical protein K13114 PNN; pinin E TRIADDRAFT_55789 hypothetical protein K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus D TREX complex E TRIADDRAFT_1612 hypothetical protein K12878 THOC1; THO complex subunit 1 E TRIADDRAFT_56575 hypothetical protein K12879 THOC2; THO complex subunit 2 E TRIADDRAFT_20906 hypothetical protein K12880 THOC3; THO complex subunit 3 E TRIADDRAFT_53742 hypothetical protein K12881 THOC4; THO complex subunit 4 E TRIADDRAFT_59730 hypothetical protein K13174 THOC5; THO complex subunit 5 E TRIADDRAFT_59146 hypothetical protein K13175 THOC6; THO complex subunit 6 E TRIADDRAFT_55432 hypothetical protein K13176 THOC7; THO complex subunit 7 D TREX-2 complex E TRIADDRAFT_51299 hypothetical protein K23801 PCID2; nuclear mRNA export protein PCID2/THP1 E TRIADDRAFT_63557 expressed hypothetical protein K11368 ENY2; enhancer of yellow 2 transcription factor E TRIADDRAFT_23944 hypothetical protein K16466 CETN3; centrin-3 D Nuclear pore complex E TRIADDRAFT_27419 hypothetical protein K14298 RAE1; mRNA export factor E TRIADDRAFT_24138 hypothetical protein K14004 SEC13; protein transport protein SEC13 E TRIADDRAFT_53012 hypothetical protein K14304 NUP85; nuclear pore complex protein Nup85 E TRIADDRAFT_25574 hypothetical protein K14305 NUP43; nuclear pore complex protein Nup43 E TRIADDRAFT_61646 hypothetical protein K14295 NUP50; nuclear pore complex protein Nup50 E TRIADDRAFT_60101 hypothetical protein K14308 NUP54; nuclear pore complex protein Nup54 E TRIADDRAFT_29876 hypothetical protein K14306 NUP62; nuclear pore complex protein Nup62 E TRIADDRAFT_49781 hypothetical protein K14309 NUP93; nuclear pore complex protein Nup93 E TRIADDRAFT_56476 hypothetical protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96 E TRIADDRAFT_28194 hypothetical protein K14301 NUP107; nuclear pore complex protein Nup107 E TRIADDRAFT_52740 hypothetical protein K14300 NUP133; nuclear pore complex protein Nup133 E TRIADDRAFT_57567 hypothetical protein K14311 NUP188; nuclear pore complex protein Nup188 E TRIADDRAFT_57982 hypothetical protein K14296 NUP153; nuclear pore complex protein Nup153 E TRIADDRAFT_29198 hypothetical protein K14312 NUP155; nuclear pore complex protein Nup155 E TRIADDRAFT_61911 hypothetical protein K14303 NUP160; nuclear pore complex protein Nup160 E TRIADDRAFT_51854 hypothetical protein K14313 NUP35; nuclear pore complex protein Nup53 E TRIADDRAFT_22433 hypothetical protein K14310 NUP205; nuclear pore complex protein Nup205 E TRIADDRAFT_51962 hypothetical protein K14314 NUP210; nuclear pore complex protein Nup210 E TRIADDRAFT_59982 hypothetical protein K14307 NUPL1; nucleoporin p58/p45 E TRIADDRAFT_58301 hypothetical protein K14321 NUPL2; nucleoporin-like protein 2 E TRIADDRAFT_55614 hypothetical protein K14299 SEH1; nucleoporin SEH1 E TRIADDRAFT_54056 hypothetical protein K14320 AAAS; aladin E TRIADDRAFT_23944 hypothetical protein K16466 CETN3; centrin-3 E TRIADDRAFT_59739 hypothetical protein K18723 GLE1; nucleoporin GLE1 D Ran-mediated transport factors E TRIADDRAFT_50649 hypothetical protein K07936 RAN; GTP-binding nuclear protein Ran E TRIADDRAFT_58970 hypothetical protein K18726 FAF2; FAS-associated factor 2 E TRIADDRAFT_58897 hypothetical protein K13525 VCP; transitional endoplasmic reticulum ATPase E TRIADDRAFT_58173 hypothetical protein K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-] E TRIADDRAFT_51014 hypothetical protein K14290 XPO1; exportin-1 E TRIADDRAFT_32548 hypothetical protein K18460 XPO7; exportin-7 E TRIADDRAFT_56415 hypothetical protein K14319 RANGAP1; Ran GTPase-activating protein 1 D eIF4F and regulatory proteins E TRIADDRAFT_28470 hypothetical protein K03259 EIF4E; translation initiation factor 4E E TRIADDRAFT_52187 hypothetical protein K03259 EIF4E; translation initiation factor 4E E TRIADDRAFT_38231 hypothetical protein K03257 EIF4A; translation initiation factor 4A E TRIADDRAFT_63472 hypothetical protein K03260 EIF4G; translation initiation factor 4G E TRIADDRAFT_53556 hypothetical protein K03258 EIF4B; translation initiation factor 4B E TRIADDRAFT_51503 hypothetical protein K24086 EIF4H; translation initiation factor 4H E TRIADDRAFT_59660 hypothetical protein K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 E TRIADDRAFT_18427 hypothetical protein K18729 ANGEL; protein angel E TRIADDRAFT_31791 hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E TRIADDRAFT_936 hypothetical protein K13133 GEMIN5; gem associated protein 5 E TRIADDRAFT_30543 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E TRIADDRAFT_58533 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E TRIADDRAFT_33552 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E TRIADDRAFT_57541 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E TRIADDRAFT_27786 hypothetical protein K13126 PABPC; polyadenylate-binding protein E TRIADDRAFT_58895 hypothetical protein K14322 PAIP1; polyadenylate-binding protein-interacting protein 1 E TRIADDRAFT_21387 hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E TRIADDRAFT_25864 hypothetical protein K07575 MCTS; malignant T-cell-amplified sequence E TRIADDRAFT_52695 hypothetical protein K24272 DENR; density-regulated protein D APOBEC1-ACF complex D Other transport factors E TRIADDRAFT_22941 hypothetical protein K14294 WIBG; partner of Y14 and mago E TRIADDRAFT_63876 hypothetical protein K14411 MSI; RNA-binding protein Musashi E TRIADDRAFT_28865 hypothetical protein K14411 MSI; RNA-binding protein Musashi E TRIADDRAFT_54175 hypothetical protein K14411 MSI; RNA-binding protein Musashi E TRIADDRAFT_5340 hypothetical protein K14411 MSI; RNA-binding protein Musashi E TRIADDRAFT_20799 hypothetical protein K14411 MSI; RNA-binding protein Musashi E TRIADDRAFT_64067 hypothetical protein K14416 HBS1; elongation factor 1 alpha-like protein E TRIADDRAFT_30657 hypothetical protein K14396 PABPN1; polyadenylate-binding protein 2 E TRIADDRAFT_50410 hypothetical protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7] E TRIADDRAFT_21689 hypothetical protein K12867 SYF1; pre-mRNA-splicing factor SYF1 E TRIADDRAFT_54088 hypothetical protein K18732 SARNP; SAP domain-containing ribonucleoprotein E TRIADDRAFT_58118 hypothetical protein K11493 RCC1; regulator of chromosome condensation E TRIADDRAFT_60324 hypothetical protein K11493 RCC1; regulator of chromosome condensation E TRIADDRAFT_57517 hypothetical protein K11493 RCC1; regulator of chromosome condensation E TRIADDRAFT_57518 hypothetical protein K11493 RCC1; regulator of chromosome condensation E TRIADDRAFT_54278 hypothetical protein K18733 LARP6; la-related protein 6 E TRIADDRAFT_51711 hypothetical protein K21772 PURA; transcriptional activator protein Pur-alpha E TRIADDRAFT_53717 hypothetical protein K22414 POLDIP3; polymerase delta-interacting protein 3 C Surveillance factors D Surveillance complex E TRIADDRAFT_33020 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1 E TRIADDRAFT_53763 hypothetical protein K03267 ERF3; peptide chain release factor subunit 3 E TRIADDRAFT_54641 hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E TRIADDRAFT_24207 hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 D Protein phosphatase 2A E TRIADDRAFT_63380 phosphatase 2A K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16] E TRIADDRAFT_35913 expressed hypothetical protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A E TRIADDRAFT_50614 hypothetical protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B E TRIADDRAFT_57146 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E TRIADDRAFT_29944 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E TRIADDRAFT_34165 hypothetical protein K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B'' E TRIADDRAFT_57312 hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' E TRIADDRAFT_27264 hypothetical protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B' D Other surveillance factors E TRIADDRAFT_60833 hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E TRIADDRAFT_54089 hypothetical protein K11125 SMG5; protein SMG5 E TRIADDRAFT_59186 hypothetical protein K11124 SMG6; protein SMG6 [EC:3.1.-.-] E TRIADDRAFT_57395 hypothetical protein K18734 SMG8; protein SMG8 E TRIADDRAFT_51276 hypothetical protein K18735 SMG9; protein SMG9 E TRIADDRAFT_57541 hypothetical protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein E TRIADDRAFT_24181 hypothetical protein K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2 E TRIADDRAFT_31352 hypothetical protein K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6] E TRIADDRAFT_53715 hypothetical protein K24887 GTPBP1; GTP-binding protein 1 C Factors involved in mRNA localization D Cargo complex E TRIADDRAFT_24346 hypothetical protein K10357 MYO5; myosin V D Factors that have mRNA localization signals E TRIADDRAFT_63164 expressed hypothetical protein K14739 MT1_2; metallothionein 1/2 E TRIADDRAFT_57914 hypothetical protein K04377 MYC; Myc proto-oncogene protein E TRIADDRAFT_9546 hypothetical protein K18741 NANOS1; protein nanos 1 D Trans-acting binding proteins E TRIADDRAFT_53440 hypothetical protein K13210 FUBP; far upstream element-binding protein E TRIADDRAFT_36635 elongation factor 1 alpha K03231 EEF1A; elongation factor 1-alpha E TRIADDRAFT_31868 elongation factor 1 alpha K03231 EEF1A; elongation factor 1-alpha E TRIADDRAFT_63207 expressed hypothetical protein K03233 EEF1G; elongation factor 1-gamma E TRIADDRAFT_30543 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E TRIADDRAFT_58533 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein D Other mRNA localization factors E TRIADDRAFT_31791 hypothetical protein K05749 CYFIP; cytoplasmic FMR1 interacting protein E TRIADDRAFT_61998 hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4 E TRIADDRAFT_64399 expressed hypothetical protein K21444 PCBP3_4; poly(rC)-binding protein 3/4 E TRIADDRAFT_62347 hypothetical protein K18743 CAPRIN1; caprin-1 C mRNA cycle factors D Common to processing body (P body) and stress granule E TRIADDRAFT_62728 hypothetical protein K11593 ELF2C; eukaryotic translation initiation factor 2C E TRIADDRAFT_28470 hypothetical protein K03259 EIF4E; translation initiation factor 4E E TRIADDRAFT_52187 hypothetical protein K03259 EIF4E; translation initiation factor 4E E TRIADDRAFT_54641 hypothetical protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] E TRIADDRAFT_33552 hypothetical protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7] E TRIADDRAFT_51339 hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E TRIADDRAFT_22806 hypothetical protein K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27] E TRIADDRAFT_64222 hypothetical protein K18749 LSM14; protein LSM14 E TRIADDRAFT_50449 hypothetical protein K18752 TNPO1; transportin-1 E TRIADDRAFT_60833 hypothetical protein K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1] E TRIADDRAFT_54089 hypothetical protein K11125 SMG5; protein SMG5 E TRIADDRAFT_59186 hypothetical protein K11124 SMG6; protein SMG6 [EC:3.1.-.-] E TRIADDRAFT_33882 hypothetical protein K18753 ZFP36L; butyrate response factor E TRIADDRAFT_56305 hypothetical protein K18754 LIN28; protein lin-28 E TRIADDRAFT_28161 hypothetical protein K04533 HD; huntingtin E TRIADDRAFT_59310 hypothetical protein K18756 BICC1; protein bicaudal C E TRIADDRAFT_56647 hypothetical protein K18757 LARP1; la-related protein 1 E TRIADDRAFT_56648 hypothetical protein K18757 LARP1; la-related protein 1 D P-body specific factors E TRIADDRAFT_22739 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E TRIADDRAFT_58702 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E TRIADDRAFT_53171 hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E TRIADDRAFT_23866 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E TRIADDRAFT_36877 expressed hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E TRIADDRAFT_50007 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E TRIADDRAFT_31943 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E TRIADDRAFT_55150 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E TRIADDRAFT_23559 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 E TRIADDRAFT_64331 expressed hypothetical protein K10407 KLC; kinesin light chain E TRIADDRAFT_24346 hypothetical protein K10357 MYO5; myosin V E TRIADDRAFT_63797 hypothetical protein K07374 TUBA; tubulin alpha E TRIADDRAFT_54910 hypothetical protein K07374 TUBA; tubulin alpha E TRIADDRAFT_54912 alpha tubulin K07374 TUBA; tubulin alpha E TRIADDRAFT_54911 hypothetical protein K07374 TUBA; tubulin alpha E TRIADDRAFT_54914 alpha tubulin K07374 TUBA; tubulin alpha E TRIADDRAFT_54906 hypothetical protein K07374 TUBA; tubulin alpha E TRIADDRAFT_61873 hypothetical protein K07374 TUBA; tubulin alpha E TRIADDRAFT_62809 hypothetical protein K07374 TUBA; tubulin alpha E TRIADDRAFT_30543 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E TRIADDRAFT_58533 hypothetical protein K02602 CPEB; cytoplasmic polyadenylation element-binding protein E TRIADDRAFT_936 hypothetical protein K13133 GEMIN5; gem associated protein 5 E TRIADDRAFT_23606 hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E TRIADDRAFT_51117 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E TRIADDRAFT_21593 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E TRIADDRAFT_51852 hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E TRIADDRAFT_30062 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E TRIADDRAFT_26102 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E TRIADDRAFT_52600 hypothetical protein K26671 GARRE1; granule associated Rac and RHOG effector protein 1 E TRIADDRAFT_10828 hypothetical protein K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-] E TRIADDRAFT_30968 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E TRIADDRAFT_24936 hypothetical protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 E TRIADDRAFT_17411 expressed hypothetical protein K14443 TOB; protein Tob/BTG E TRIADDRAFT_54328 hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 E TRIADDRAFT_59925 hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4 E TRIADDRAFT_24207 hypothetical protein K14327 UPF2; regulator of nonsense transcripts 2 E TRIADDRAFT_20343 hypothetical protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E TRIADDRAFT_23736 hypothetical protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E TRIADDRAFT_57864 hypothetical protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27] E TRIADDRAFT_50378 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 D Stress granule specific factors E TRIADDRAFT_28438 hypothetical protein K13201 TIA1; nucleolysin TIA-1/TIAR E TRIADDRAFT_27786 hypothetical protein K13126 PABPC; polyadenylate-binding protein E TRIADDRAFT_64182 hypothetical protein K24983 G3BP2; Ras GTPase-activating protein-binding protein 2 E TRIADDRAFT_18281 hypothetical protein K15026 EIF2A; translation initiation factor 2A E TRIADDRAFT_21889 hypothetical protein K03253 EIF3B; translation initiation factor 3 subunit B E TRIADDRAFT_38231 hypothetical protein K03257 EIF4A; translation initiation factor 4A E TRIADDRAFT_38398 DEAD box ATP-dependent RNA helicase K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] E TRIADDRAFT_53556 hypothetical protein K03258 EIF4B; translation initiation factor 4B E TRIADDRAFT_63472 hypothetical protein K03260 EIF4G; translation initiation factor 4G E TRIADDRAFT_60987 hypothetical protein K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1] E TRIADDRAFT_37621 expressed hypothetical protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein E TRIADDRAFT_56890 hypothetical protein K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98] E TRIADDRAFT_60006 hypothetical protein K18404 TDRD3; tudor domain-containing protein 3 E TRIADDRAFT_54234 hypothetical protein K18763 LARP4; la-related protein 4 B mRNA degradation factors C 5'-3' decay D Decapping complex E TRIADDRAFT_22739 hypothetical protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] E TRIADDRAFT_51339 hypothetical protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7] E TRIADDRAFT_59925 hypothetical protein K12616 EDC4; enhancer of mRNA-decapping protein 4 E TRIADDRAFT_54328 hypothetical protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1 D Lsm complex E TRIADDRAFT_58702 hypothetical protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1 E TRIADDRAFT_53171 hypothetical protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2 E TRIADDRAFT_23866 hypothetical protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3 E TRIADDRAFT_36877 expressed hypothetical protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4 E TRIADDRAFT_50007 hypothetical protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5 E TRIADDRAFT_31943 hypothetical protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6 E TRIADDRAFT_55150 hypothetical protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7 E TRIADDRAFT_23559 hypothetical protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8 D 5' exonucleases D Other 5'-3' decay factors E TRIADDRAFT_18652 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] C 3'-5' decay D Core exosome factors E TRIADDRAFT_50612 hypothetical protein K07573 CSL4; exosome complex component CSL4 E TRIADDRAFT_21452 hypothetical protein K03679 RRP4; exosome complex component RRP4 E TRIADDRAFT_51876 hypothetical protein K11600 RRP41; exosome complex component RRP41 E TRIADDRAFT_61054 hypothetical protein K12587 MTR3; exosome complex component MTR3 E TRIADDRAFT_55798 hypothetical protein K12589 RRP42; exosome complex component RRP42 E TRIADDRAFT_25085 hypothetical protein K12586 RRP43; exosome complex component RRP43 E TRIADDRAFT_14906 hypothetical protein K03678 RRP45; exosome complex component RRP45 D Exosome cofactors E TRIADDRAFT_25898 hypothetical protein K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-] E TRIADDRAFT_27020 hypothetical protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-] E TRIADDRAFT_57253 hypothetical protein K12592 C1D; exosome complex protein LRP1 E TRIADDRAFT_55666 hypothetical protein K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type D TRAMP complex E TRIADDRAFT_23436 hypothetical protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19] E TRIADDRAFT_51887 hypothetical protein K12597 AIR1_2; protein AIR1/2 D Ski complex E TRIADDRAFT_21387 hypothetical protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6] E TRIADDRAFT_54351 hypothetical protein K12600 SKI3; superkiller protein 3 E TRIADDRAFT_52348 hypothetical protein K12602 WDR61; WD repeat-containing protein 61 D Ccr4-NOT complex E TRIADDRAFT_30062 hypothetical protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] E TRIADDRAFT_23606 hypothetical protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1 E TRIADDRAFT_51117 hypothetical protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2 E TRIADDRAFT_21593 hypothetical protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3 E TRIADDRAFT_51852 hypothetical protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] E TRIADDRAFT_26102 hypothetical protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8 E TRIADDRAFT_50081 hypothetical protein K12606 RCD1; CCR4-NOT transcription complex subunit 9 E TRIADDRAFT_52629 hypothetical protein K12607 CNOT10; CCR4-NOT transcription complex subunit 10 D Pan complex E TRIADDRAFT_30968 hypothetical protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4] E TRIADDRAFT_24936 hypothetical protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3 D Other 3'-5' decay factors E TRIADDRAFT_52927 hypothetical protein K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4] E TRIADDRAFT_22905 hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E TRIADDRAFT_54096 hypothetical protein K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] E TRIADDRAFT_17411 expressed hypothetical protein K14443 TOB; protein Tob/BTG E TRIADDRAFT_25141 hypothetical protein K18764 NOCT; nocturnin [EC:3.1.3.108] E TRIADDRAFT_28382 hypothetical protein K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] E TRIADDRAFT_4552 hypothetical protein K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-] E TRIADDRAFT_20827 hypothetical protein K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-] E TRIADDRAFT_18652 hypothetical protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59] E TRIADDRAFT_20232 hypothetical protein K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E TRIADDRAFT_21945 hypothetical protein K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E TRIADDRAFT_12445 hypothetical protein K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-] E TRIADDRAFT_30197 hypothetical protein K26109 NRDE2; nuclear exosome regulator NRDE2 E TRIADDRAFT_20291 hypothetical protein K27396 SMG; protein Smaug C Other degradation factors D RNases E TRIADDRAFT_24967 hypothetical protein K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-] # AProkaryotic type B Bacterial mRNA degradation factors C RNA degradosome components D Ribonucreases E TRIADDRAFT_23482 hypothetical protein K13288 orn; oligoribonuclease [EC:3.1.-.-] D Helicases D Other RNA degradosome components E TRIADDRAFT_37880 expressed hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E TRIADDRAFT_18118 hypothetical protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] E TRIADDRAFT_57060 hypothetical protein K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] E TRIADDRAFT_28803 hypothetical protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C Other RNA degradation factors D Chaperones E TRIADDRAFT_64372 hypothetical protein K04043 dnaK; molecular chaperone DnaK E TRIADDRAFT_54071 hypothetical protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Others D Bacterial Small RNA Regulators B Archeal mRNA degradation factors C Exosome components D Core exosome E TRIADDRAFT_21452 hypothetical protein K03679 RRP4; exosome complex component RRP4 E TRIADDRAFT_50612 hypothetical protein K07573 CSL4; exosome complex component CSL4 D Cofactors E TRIADDRAFT_51876 hypothetical protein K11600 RRP41; exosome complex component RRP41 E TRIADDRAFT_55798 hypothetical protein K12589 RRP42; exosome complex component RRP42 D Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024