+D GENES KO
#
KEGG Orthology (KO) - Thermoleophilum album
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:talu00010]
D JDY09_01330 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06695 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06685 tal; transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D JDY09_02575 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D JDY09_06030 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDY09_01925 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDY09_02915 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDY09_02905 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDY09_02910 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDY09_02920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JDY09_01475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDY09_08130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDY09_00405 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDY09_00400 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDY09_00395 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_01845 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDY09_01850 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDY09_01875 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_03225 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:talu00020]
D JDY09_00790 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JDY09_06580 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JDY09_01255 isocitrate/isopropylmalate dehydrogenase family protein K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D JDY09_00770 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_01845 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDY09_01850 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDY09_03160 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_09140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_03165 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_09135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_01245 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDY09_01240 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDY09_01235 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDY09_09470 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDY09_03225 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JDY09_00405 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDY09_00400 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDY09_00395 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:talu00030]
D JDY09_06685 tal; transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D JDY09_02575 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D JDY09_06675 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDY09_06665 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D JDY09_06680 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDY09_00880 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDY09_06690 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDY09_03640 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JDY09_00845 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JDY09_01825 hypothetical protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D JDY09_01415 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDY09_01695 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D JDY09_01925 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDY09_06030 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:talu00040]
D JDY09_00880 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDY09_02315 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:talu00051]
D JDY09_02575 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D JDY09_05385 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDY09_02570 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JDY09_02585 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JDY09_02315 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D JDY09_06030 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDY09_01925 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDY09_02915 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDY09_00845 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:talu00052]
D JDY09_06700 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D JDY09_09600 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JDY09_04115 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_07890 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_08865 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_01330 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06695 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06840 1-phosphofructokinase family hexose kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D JDY09_06030 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:talu00500]
D JDY09_02625 glycoside hydrolase family 6 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JDY09_07230 glycoside hydrolase family 6 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JDY09_05480 NTP transferase domain-containing protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D JDY09_02005 DUF1957 domain-containing protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDY09_09675 glycosyltransferase K13057 treT; trehalose synthase [EC:2.4.1.245]
D JDY09_09680 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D JDY09_09435 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D JDY09_06660 glycoside hydrolase family 15 protein K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D JDY09_01330 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06695 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06685 tal; transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D JDY09_02575 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:talu00520]
D JDY09_01220 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JDY09_01665 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JDY09_06805 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDY09_06810 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JDY09_01410 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JDY09_04550 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDY09_09735 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JDY09_08965 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D JDY09_09730 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JDY09_01330 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06695 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06700 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D JDY09_09600 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JDY09_04115 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_07890 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_08865 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_06685 tal; transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D JDY09_02575 bifunctional phosphoglucose/phosphomannose isomerase K15916 pgi-pmi; glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8]
D JDY09_05385 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDY09_02570 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JDY09_02585 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JDY09_05480 NTP transferase domain-containing protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
C 00620 Pyruvate metabolism [PATH:talu00620]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_01845 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDY09_01850 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDY09_00405 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDY09_00400 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDY09_00395 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_01875 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDY09_08130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDY09_08415 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDY09_09120 accC; acetyl-CoA carboxylase biotin carboxylase subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_01895 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JDY09_04200 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JDY09_05785 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JDY09_08460 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JDY09_06005 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDY09_09470 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDY09_03225 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JDY09_03865 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_04450 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JDY09_04500 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:talu00630]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_03865 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDY09_00790 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JDY09_06580 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_09500 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDY09_03285 protein meaA K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D JDY09_03170 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JDY09_09120 accC; acetyl-CoA carboxylase biotin carboxylase subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JDY09_02155 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDY09_02145 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_09055 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_07495 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D JDY09_03105 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_02235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDY09_03765 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JDY09_03770 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JDY09_03755 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_03760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JDY09_09165 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDY09_00770 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:talu00640]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_08415 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDY09_09120 accC; acetyl-CoA carboxylase biotin carboxylase subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JDY09_09500 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDY09_02155 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDY09_02145 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_09055 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_03165 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_09135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_03160 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_09140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:talu00650]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_06540 hypothetical protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_07640 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_07930 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_01245 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDY09_01240 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDY09_01235 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDY09_09475 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDY09_01845 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDY09_01850 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDY09_03420 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDY09_03445 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D JDY09_04390 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDY09_04395 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:talu00660]
D JDY09_04390 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDY09_04395 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JDY09_03165 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_09135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_03160 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_09140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_03170 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JDY09_04475 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JDY09_04480 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JDY09_04490 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:talu00562]
D JDY09_02370 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D JDY09_06735 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDY09_09405 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDY09_00485 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D JDY09_02915 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:talu00190]
D JDY09_00965 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D JDY09_00960 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D JDY09_00955 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D JDY09_00950 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D JDY09_00945 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D JDY09_00940 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D JDY09_00935 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D JDY09_00930 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D JDY09_00925 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D JDY09_00920 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D JDY09_00915 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D JDY09_00910 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D JDY09_00905 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D JDY09_00900 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D JDY09_01245 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDY09_01240 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDY09_01235 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDY09_09790 ubiquinol-cytochrome c reductase iron-sulfur subunit K03886 qcrA; quinol---cytochrome c reductase iron-sulfur subunit, bacillus type [EC:7.1.1.8]
D JDY09_09785 cytochrome b N-terminal domain-containing protein K03887 qcrB; quinol---cytochrome c reductase cytochrome b subunit, bacillus type [EC:7.1.1.8]
D JDY09_09780 c-type cytochrome K03888 qcrC; quinol---cytochrome c reductase cytochrome c subunit, bacillus type [EC:7.1.1.8]
D JDY09_06650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDY09_06730 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JDY09_06640 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JDY09_06720 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JDY09_06635 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JDY09_06715 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JDY09_06645 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDY09_02290 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JDY09_02300 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JDY09_02295 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JDY09_02285 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JDY09_02305 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JDY09_02270 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JDY09_02280 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDY09_02275 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:talu00710]
D JDY09_02910 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDY09_02905 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDY09_01925 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDY09_06690 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDY09_03640 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JDY09_00845 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JDY09_02915 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDY09_00880 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDY09_06685 tal; transaldolase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:talu00720]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDY09_09470 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDY09_01245 FAD-binding protein K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDY09_01240 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDY09_01235 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDY09_03160 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_09140 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDY09_03165 acetate--CoA ligase family protein K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_09135 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDY09_07925 enoyl-CoA hydratase/isomerase family protein K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_01845 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDY09_01850 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDY09_06580 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JDY09_08415 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDY09_03435 enoyl-CoA hydratase/isomerase family protein K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116]
D JDY09_08375 enoyl-CoA hydratase/isomerase family protein K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116]
D JDY09_03170 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JDY09_09500 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDY09_02145 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_09055 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_02155 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDY09_04340 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JDY09_00780 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:talu00680]
D JDY09_02235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDY09_01475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDY09_03170 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D JDY09_01925 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDY09_06030 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_02920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JDY09_04440 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDY09_03360 cofH; 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D JDY09_03400 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D JDY09_03405 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D JDY09_03395 cofE; coenzyme F420-0:L-glutamate ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:talu00910]
D JDY09_03530 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDY09_01380 molybdopterin-dependent oxidoreductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D JDY09_07165 NAD(P)/FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D JDY09_07160 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D JDY09_09090 nitrite/sulfite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D JDY09_03105 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07490 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JDY09_07495 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D JDY09_07380 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:talu00920]
D JDY09_07955 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JDY09_07950 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JDY09_07945 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D JDY09_07940 TOBE-like domain-containing protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JDY09_03250 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D JDY09_09105 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JDY09_09100 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDY09_09110 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JDY09_05230 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JDY09_09095 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D JDY09_06515 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDY09_04315 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JDY09_04310 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:talu00061]
D JDY09_08415 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDY09_09120 accC; acetyl-CoA carboxylase biotin carboxylase subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JDY09_04005 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D JDY09_07815 acyl carrier protein K02078 acpP; acyl carrier protein
D JDY09_07830 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDY09_07825 beta-ketoacyl-ACP synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JDY09_07810 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JDY09_07820 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_08390 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_08540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:talu00071]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_07635 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_07225 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDY09_08005 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDY09_08385 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDY09_08540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JDY09_05845 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDY09_01875 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:talu00561]
D JDY09_09165 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_08410 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDY09_04000 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JDY09_01095 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDY09_08405 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDY09_05000 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDY09_07365 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00564 Glycerophospholipid metabolism [PATH:talu00564]
D JDY09_02195 hypothetical protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JDY09_03600 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JDY09_01095 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDY09_08405 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDY09_02370 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D JDY09_09340 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDY09_04915 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JDY09_08835 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JDY09_04950 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:talu00565]
D JDY09_00765 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D JDY09_04980 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D JDY09_02370 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:talu00592]
D JDY09_07635 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:talu01040]
D JDY09_04460 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:talu00230]
D JDY09_05555 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JDY09_01415 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDY09_00580 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JDY09_00545 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JDY09_00585 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JDY09_00575 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JDY09_00565 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JDY09_00570 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDY09_00105 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JDY09_09220 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JDY09_00550 AIR carboxylase family protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JDY09_09225 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JDY09_00560 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JDY09_00555 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JDY09_00590 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDY09_04970 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDY09_08570 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JDY09_04595 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JDY09_07860 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JDY09_06835 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDY09_06285 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDY09_06895 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JDY09_06830 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JDY09_05295 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JDY09_08870 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDY09_01560 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDY09_08425 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDY09_05530 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D JDY09_05405 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JDY09_01630 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JDY09_01615 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JDY09_07870 MerR family transcriptional regulator K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JDY09_09715 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JDY09_09825 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JDY09_08615 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDY09_01470 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDY09_05380 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D JDY09_09110 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JDY09_09105 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JDY09_09100 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:talu00240]
D JDY09_05315 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDY09_05320 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDY09_05335 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JDY09_05330 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JDY09_05305 tRNA-dihydrouridine synthase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JDY09_05310 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D JDY09_09610 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JDY09_06850 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JDY09_04900 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JDY09_06285 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDY09_01470 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDY09_06280 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JDY09_05560 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JDY09_08570 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JDY09_05340 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDY09_09825 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D JDY09_09760 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D JDY09_08870 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDY09_01560 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDY09_08425 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDY09_08860 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JDY09_05095 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:talu00250]
D JDY09_06930 FAD-dependent oxidoreductase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JDY09_06910 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDY09_04260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDY09_04510 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDY09_09715 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JDY09_00555 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JDY09_05335 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JDY09_09475 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDY09_07490 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JDY09_03105 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_05315 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDY09_05320 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDY09_00570 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDY09_06805 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDY09_00580 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:talu00260]
D JDY09_01225 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDY09_01230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDY09_07525 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDY09_07515 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JDY09_05370 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDY09_07520 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDY09_02235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDY09_09165 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDY09_02920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JDY09_04440 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDY09_04435 alanine--glyoxylate aminotransferase family protein K13290 K13290; serine---pyruvate transaminase [EC:2.6.1.51]
D JDY09_08440 bioF; 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JDY09_02795 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D JDY09_03765 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JDY09_03770 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JDY09_03755 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_03760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JDY09_06045 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JDY09_06050 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:talu00270]
D JDY09_04315 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JDY09_04310 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDY09_08220 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JDY09_03840 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JDY09_01085 speD; adenosylmethionine decarboxylase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JDY09_05880 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D JDY09_04595 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JDY09_01865 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D JDY09_02580 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDY09_01225 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDY09_01230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDY09_07525 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDY09_04495 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_09740 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_06515 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDY09_01260 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDY09_04440 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:talu00280]
D JDY09_04495 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_09740 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_07225 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDY09_08005 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDY09_08385 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDY09_02070 acyl-CoA dehydrogenase family protein K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_07635 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDY09_09120 accC; acetyl-CoA carboxylase biotin carboxylase subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JDY09_09500 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDY09_02155 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDY09_02145 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_09055 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDY09_06330 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JDY09_06955 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_03420 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDY09_03445 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:talu00290]
D JDY09_04475 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JDY09_04480 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JDY09_04490 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JDY09_04390 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDY09_04395 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JDY09_04430 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JDY09_04095 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JDY09_04495 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_09740 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_04450 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D JDY09_04500 citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:talu00300]
D JDY09_07525 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDY09_01225 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDY09_01230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDY09_05180 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDY09_05190 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JDY09_04255 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDY09_05115 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JDY09_05110 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D JDY09_07530 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JDY09_09145 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D JDY09_09850 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D JDY09_03710 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDY09_03715 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:talu00310]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_09475 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDY09_08950 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:talu00220]
D JDY09_00460 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JDY09_04260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDY09_04510 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDY09_00570 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDY09_03105 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_05315 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDY09_05320 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDY09_04245 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D JDY09_04250 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JDY09_04240 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JDY09_04255 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDY09_08060 M20/M25/M40 family metallo-hydrolase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:talu00330]
D JDY09_06945 hydantoinase/oxoprolinase family protein K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D JDY09_06950 hydantoinase B/oxoprolinase family protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D JDY09_06175 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JDY09_01085 speD; adenosylmethionine decarboxylase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_02795 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D JDY09_07735 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDY09_04615 NAD(P)-binding domain-containing protein K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JDY09_06225 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JDY09_06220 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:talu00340]
D JDY09_04560 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JDY09_04555 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D JDY09_06085 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D JDY09_04580 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D JDY09_04575 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JDY09_04585 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JDY09_04570 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JDY09_03815 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08550 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07745 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D JDY09_04565 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JDY09_05795 hypothetical protein K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_02795 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D JDY09_01905 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
D JDY09_01910 egtB; ergothioneine biosynthesis protein EgtB K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50]
C 00350 Tyrosine metabolism [PATH:talu00350]
D JDY09_03815 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08550 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_02795 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D JDY09_01875 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDY09_09475 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:talu00360]
D JDY09_02795 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D JDY09_06630 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_06540 hypothetical protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_07640 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_07930 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_03815 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08550 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07735 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDY09_09285 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D JDY09_05845 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:talu00380]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02795 flavin monoamine oxidase family protein K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_07735 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:talu00400]
D JDY09_03820 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JDY09_05655 bifunctional shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D JDY09_05650 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JDY09_05730 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D JDY09_03830 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JDY09_05660 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JDY09_06080 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDY09_06075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JDY09_06070 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JDY09_06055 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D JDY09_06065 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JDY09_06045 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JDY09_06050 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JDY09_03810 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D JDY09_03825 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JDY09_00040 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JDY09_03815 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08550 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:talu00410]
D JDY09_05940 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_05935 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00430 Taurine and hypotaurine metabolism
D JDY09_01985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:talu00450]
D JDY09_08220 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JDY09_07305 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JDY09_06610 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JDY09_09105 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JDY09_09100 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDY09_01345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:talu00460]
D JDY09_01985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JDY09_02235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:talu00470]
D JDY09_06785 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JDY09_00090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_09855 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_00570 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDY09_03725 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDY09_04410 hypothetical protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D JDY09_05115 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JDY09_07530 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:talu00480]
D JDY09_01985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JDY09_05890 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D JDY09_02120 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JDY09_03000 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JDY09_06680 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDY09_06675 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDY09_01085 speD; adenosylmethionine decarboxylase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
D JDY09_01790 hypothetical protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis [PATH:talu00542]
D JDY09_02240 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:talu00541]
D JDY09_04115 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_07890 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_08865 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDY09_09255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDY09_06360 SDR family oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_09265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_05450 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDY09_09260 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D JDY09_05480 NTP transferase domain-containing protein K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D JDY09_05385 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDY09_01410 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JDY09_09735 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JDY09_08965 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D JDY09_09730 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:talu00550]
D JDY09_04550 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDY09_03740 murB; UDP-N-acetylmuramate dehydrogenase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JDY09_03725 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDY09_03710 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDY09_00090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_09855 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_03715 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JDY09_04910 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JDY09_00120 hypothetical protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDY09_02860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDY09_03720 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDY09_03735 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDY09_09645 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDY09_06260 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JDY09_03695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JDY09_00080 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D JDY09_00345 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDY09_06845 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDY09_08560 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JDY09_05080 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D JDY09_05085 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:talu00552]
D JDY09_00120 hypothetical protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDY09_02860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDY09_02240 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDY09_08960 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:talu00543]
D JDY09_02240 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDY09_04315 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:talu00730]
D JDY09_05705 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D JDY09_04080 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D JDY09_01000 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JDY09_00440 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D JDY09_05585 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JDY09_00450 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D JDY09_00425 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D JDY09_09650 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D JDY09_08615 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:talu00740]
D JDY09_03950 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JDY09_03940 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JDY09_03955 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JDY09_03945 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JDY09_05220 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JDY09_05555 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:talu00750]
D JDY09_05370 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDY09_07520 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDY09_05470 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D JDY09_05465 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:talu00760]
D JDY09_06930 FAD-dependent oxidoreductase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JDY09_02670 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JDY09_02650 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JDY09_09510 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JDY09_08570 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JDY09_06215 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JDY09_01470 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDY09_04995 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D JDY09_06505 pncA; bifunctional nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D JDY09_07920 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JDY09_05570 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JDY09_01835 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JDY09_01840 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JDY09_01830 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D JDY09_09475 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:talu00770]
D JDY09_04390 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDY09_04395 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JDY09_04430 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JDY09_04095 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JDY09_05945 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JDY09_05935 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JDY09_07800 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D JDY09_05285 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JDY09_01470 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDY09_03980 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JDY09_05980 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JDY09_06800 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JDY09_04495 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_09740 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_05940 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:talu00780]
D JDY09_07810 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JDY09_07820 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_08390 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_08125 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JDY09_08475 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JDY09_08445 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D JDY09_08435 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D JDY09_09585 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:talu00785]
D JDY09_00370 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JDY09_00365 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_00405 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JDY09_00400 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JDY09_00395 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDY09_00770 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JDY09_03765 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JDY09_03770 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JDY09_03755 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDY09_03760 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:talu00790]
D JDY09_02365 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D JDY09_07845 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JDY09_07840 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JDY09_03605 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JDY09_07850 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JDY09_06295 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JDY09_03950 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JDY09_07670 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JDY09_08825 GTP cyclohydrolase I FolE2 K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39]
D JDY09_01495 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JDY09_01505 bifunctional molybdenum cofactor biosynthesis protein MoaC/MoaB K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JDY09_01500 molybdenum cofactor biosynthesis protein MoaE K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D JDY09_01510 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JDY09_01490 NTP transferase domain-containing protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:talu00670]
D JDY09_04340 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JDY09_02235 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDY09_00585 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JDY09_00590 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDY09_05795 hypothetical protein K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D JDY09_00150 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDY09_03255 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDY09_03870 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDY09_03755 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDY09_08220 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JDY09_00780 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:talu00860]
D JDY09_04285 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDY09_09565 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D JDY09_09800 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JDY09_09810 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JDY09_09570 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JDY09_09575 cobA; uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D JDY09_09540 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D JDY09_09805 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D JDY09_06650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDY09_06645 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDY09_07140 cobJ; precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D JDY09_07120 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D JDY09_07135 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D JDY09_07130 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D JDY09_07105 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D JDY09_07095 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D JDY09_07080 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D JDY09_06490 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JDY09_07090 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JDY09_07045 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D JDY09_07035 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D JDY09_06990 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D JDY09_06995 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D JDY09_07085 ATP-binding protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D JDY09_09195 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D JDY09_02660 ferritin K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:talu00130]
D JDY09_09775 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JDY09_04400 isochorismate synthase K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2]
D JDY09_04405 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D JDY09_04425 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D JDY09_04420 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D JDY09_04415 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:talu00900]
D JDY09_05585 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JDY09_04925 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JDY09_07750 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JDY09_01360 hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JDY09_07740 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D JDY09_04940 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JDY09_07355 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_05590 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JDY09_09770 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JDY09_04910 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:talu00906]
D JDY09_02345 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D JDY09_02340 crtI; phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:talu00907]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_08380 acyl-CoA dehydrogenase family protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D JDY09_03420 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDY09_07635 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JDY09_06690 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:talu00523]
D JDY09_09255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDY09_06360 SDR family oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_09265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_05450 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDY09_09260 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D JDY09_04400 isochorismate synthase K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:talu01055]
D JDY09_01785 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D JDY09_06360 SDR family oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_09265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:talu00332]
D JDY09_06225 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JDY09_06220 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:talu00261]
D JDY09_01785 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D JDY09_09105 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JDY09_09100 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDY09_01225 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDY09_01230 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDY09_05180 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDY09_05190 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:talu00521]
D JDY09_01330 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06695 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_00485 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D JDY09_06735 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDY09_09405 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDY09_09255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDY09_06360 SDR family oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_09265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_05450 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDY09_09260 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JDY09_01330 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JDY09_06695 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:talu00525]
D JDY09_09255 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDY09_06360 SDR family oxidoreductase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDY09_09265 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:talu00401]
D JDY09_03825 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JDY09_03815 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08550 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JDY09_06080 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDY09_06075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JDY09_07830 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDY09_07820 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_08390 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JDY09_04005 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D JDY09_07815 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:talu00999]
D JDY09_03840 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JDY09_05730 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:talu00362]
D JDY09_07635 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDY09_03805 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JDY09_04455 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D JDY09_05845 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDY09_03415 SDR family oxidoreductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDY09_06540 hypothetical protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_07640 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_07930 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:talu00627]
D JDY09_07735 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDY09_07210 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
D JDY09_04455 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00625 Chloroalkane and chloroalkene degradation [PATH:talu00625]
D JDY09_01875 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDY09_08500 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDY09_09130 HAD hydrolase-like protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:talu00361]
D JDY09_04455 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
D JDY09_03805 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D JDY09_09130 HAD hydrolase-like protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:talu00623]
D JDY09_04455 iron-containing alcohol dehydrogenase K00217 E1.3.1.32; maleylacetate reductase [EC:1.3.1.32]
C 00622 Xylene degradation [PATH:talu00622]
D JDY09_03805 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D JDY09_07635 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:talu00643]
D JDY09_07735 hypothetical protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDY09_03805 VOC family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D JDY09_04485 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:talu00626]
D JDY09_01875 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D JDY09_06595 GMC family oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:talu03020]
D JDY09_08770 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDY09_08765 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDY09_08585 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDY09_05290 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:talu03010]
D JDY09_05985 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JDY09_04890 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JDY09_08690 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JDY09_08590 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JDY09_08635 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JDY09_09685 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JDY09_08745 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JDY09_08650 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JDY09_06815 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JDY09_08725 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JDY09_08595 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JDY09_08750 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JDY09_08600 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JDY09_08655 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JDY09_05215 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JDY09_08675 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JDY09_09695 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JDY09_08700 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JDY09_06155 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JDY09_08785 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JDY09_08705 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JDY09_08720 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JDY09_08715 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JDY09_08660 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JDY09_08645 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JDY09_08775 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JDY09_09700 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JDY09_08780 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JDY09_08790 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JDY09_06820 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JDY09_08670 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JDY09_08625 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JDY09_08685 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JDY09_08580 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JDY09_08640 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JDY09_04050 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JDY09_04220 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JDY09_06245 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JDY09_08695 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JDY09_08710 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JDY09_08665 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JDY09_01450 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JDY09_06240 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JDY09_03960 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JDY09_08680 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JDY09_08630 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JDY09_02200 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JDY09_03995 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JDY09_08805 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JDY09_09905 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JDY09_04215 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JDY09_08605 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JDY09_04535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDY09_04540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:talu00970]
D JDY09_05515 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDY09_04285 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDY09_04365 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDY09_04370 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JDY09_04360 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JDY09_05745 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDY09_05775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDY09_01315 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDY09_04205 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDY09_00985 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDY09_07730 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDY09_01345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDY09_00150 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDY09_03255 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDY09_03870 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDY09_06300 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDY09_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDY09_09460 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDY09_07780 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDY09_02960 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDY09_04945 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDY09_05780 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDY09_04230 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDY09_04235 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDY09_04525 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDY09_03780 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:talu03060]
D JDY09_08620 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDY09_08800 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDY09_03060 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDY09_05425 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JDY09_09890 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDY09_02605 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDY09_04025 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDY09_04020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDY09_08035 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JDY09_01750 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JDY09_07260 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JDY09_01755 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JDY09_04055 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDY09_04625 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JDY09_02825 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:talu04122]
D JDY09_06515 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDY09_05770 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JDY09_01495 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JDY09_05365 MoaD family protein K03636 moaD; sulfur-carrier protein
D JDY09_07275 MoaD family protein K03636 moaD; sulfur-carrier protein
D JDY09_01500 molybdenum cofactor biosynthesis protein MoaE K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D JDY09_01505 bifunctional molybdenum cofactor biosynthesis protein MoaC/MoaB K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JDY09_01000 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JDY09_00445 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D JDY09_07265 cysteine synthase family protein K21148 cysM; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase [EC:2.5.1.113]
D JDY09_07245 M67 family metallopeptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:talu03018]
D JDY09_01475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDY09_05200 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JDY09_00805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDY09_05175 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDY09_00510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDY09_09365 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDY09_06780 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:talu03030]
D JDY09_04270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDY09_01200 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDY09_08855 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDY09_06160 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDY09_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDY09_09705 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JDY09_09690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDY09_04150 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDY09_04060 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JDY09_06000 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDY09_08565 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:talu03410]
D JDY09_00505 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JDY09_04515 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JDY09_05545 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDY09_09335 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JDY09_08110 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JDY09_05925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDY09_04280 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JDY09_06000 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDY09_05410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDY09_08565 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:talu03420]
D JDY09_01460 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JDY09_05960 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JDY09_05970 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JDY09_02895 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JDY09_04335 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDY09_06000 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDY09_08565 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:talu03430]
D JDY09_04335 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDY09_05410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDY09_09690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDY09_04270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDY09_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDY09_01200 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDY09_06160 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDY09_08855 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDY09_08565 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:talu03440]
D JDY09_05410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDY09_09690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDY09_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JDY09_05535 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JDY09_01210 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JDY09_00630 hypothetical protein K03553 recA; recombination protein RecA
D JDY09_05140 recA; recombinase RecA K03553 recA; recombination protein RecA
D JDY09_06000 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDY09_05440 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JDY09_05435 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JDY09_05445 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JDY09_03970 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JDY09_04270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDY09_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDY09_01200 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDY09_06160 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDY09_08855 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDY09_03855 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D JDY09_02780 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:talu02010]
D JDY09_07955 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JDY09_07950 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JDY09_07945 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D JDY09_07940 TOBE-like domain-containing protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JDY09_02100 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JDY09_08100 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JDY09_00270 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D JDY09_00265 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D JDY09_07325 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JDY09_07320 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JDY09_07315 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JDY09_02735 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JDY09_08200 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDY09_08205 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDY09_08195 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JDY09_00725 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDY09_00720 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JDY09_00715 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JDY09_00710 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDY09_01725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDY09_01715 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JDY09_01720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JDY09_01705 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JDY09_01710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JDY09_00340 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D JDY09_07535 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JDY09_07545 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D JDY09_02500 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JDY09_07005 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D JDY09_07000 ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D JDY09_09555 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C
D JDY09_09550 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D JDY09_02705 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D JDY09_02700 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:talu03070]
D JDY09_05425 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JDY09_08800 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDY09_03060 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDY09_08620 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDY09_09890 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDY09_02605 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDY09_04020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDY09_04025 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDY09_01750 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JDY09_07260 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JDY09_01755 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:talu02020]
D JDY09_03625 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JDY09_02365 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D JDY09_00725 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDY09_04635 flagellin K02406 fliC; flagellin
D JDY09_04880 flagellin K02406 fliC; flagellin
D JDY09_04130 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_04695 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_04805 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JDY09_06645 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDY09_09660 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D JDY09_05165 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA
D JDY09_00005 ATP-binding protein K02313 dnaA; chromosomal replication initiator protein
D JDY09_07535 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JDY09_06005 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDY09_07285 sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDY09_08000 HAMP domain-containing protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDY09_01520 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JDY09_04640 carbon storage regulator K03563 csrA; carbon storage regulator
D JDY09_03635 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D JDY09_03665 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JDY09_07190 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D JDY09_03105 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_09345 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JDY09_09735 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JDY09_08965 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D JDY09_02625 glycoside hydrolase family 6 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JDY09_07230 glycoside hydrolase family 6 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:talu02024]
D JDY09_06080 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDY09_06075 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JDY09_01725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDY09_01715 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JDY09_01720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JDY09_01705 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JDY09_01710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JDY09_08400 N-acyl homoserine lactonase family protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D JDY09_08540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JDY09_09345 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JDY09_03940 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JDY09_05995 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JDY09_05755 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JDY09_09890 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDY09_01110 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D JDY09_05425 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JDY09_08800 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDY09_03060 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDY09_08620 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDY09_02605 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDY09_04020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDY09_04025 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDY09_02370 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:talu02030]
D JDY09_04745 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JDY09_04760 FliM/FliN family flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D JDY09_04820 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JDY09_04805 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JDY09_04810 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:talu02040]
D JDY09_04735 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JDY09_04740 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JDY09_04745 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JDY09_04750 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D JDY09_04755 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JDY09_04770 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JDY09_04760 FliM/FliN family flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D JDY09_04820 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JDY09_04830 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JDY09_04835 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JDY09_04840 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JDY09_04850 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JDY09_04845 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JDY09_04725 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JDY09_04730 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JDY09_04785 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D JDY09_04795 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D JDY09_04680 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D JDY09_04670 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D JDY09_04655 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JDY09_04650 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JDY09_04635 flagellin K02406 fliC; flagellin
D JDY09_04880 flagellin K02406 fliC; flagellin
D JDY09_04710 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JDY09_04715 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JDY09_04805 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JDY09_04810 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JDY09_01030 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_01570 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_01945 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_02755 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_05520 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_06140 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_08820 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_04130 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_04695 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JDY09_01475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:talu04980]
D JDY09_06490 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JDY09_02040 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D JDY09_03280 AAA family ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D JDY09_08220 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:talu01501]
D JDY09_01220 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JDY09_09645 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDY09_06260 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JDY09_03695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:talu01502]
D JDY09_00090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_09855 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_06785 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JDY09_03715 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JDY09_03720 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDY09_03735 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:talu01000]
C 01001 Protein kinases [BR:talu01001]
D JDY09_00085 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDY09_02935 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDY09_09670 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JDY09_02410 P-loop NTPase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JDY09_03190 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JDY09_00240 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDY09_07285 sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDY09_08000 HAMP domain-containing protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:talu01009]
D JDY09_02580 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDY09_00070 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:talu01002]
D JDY09_04625 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JDY09_05690 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JDY09_06830 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JDY09_01155 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D JDY09_00580 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JDY09_07495 gltB; glutamate synthase large subunit K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D JDY09_06805 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDY09_06910 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDY09_03215 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JDY09_02120 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JDY09_08610 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JDY09_05645 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JDY09_05460 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JDY09_02645 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDY09_07855 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDY09_09505 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDY09_07565 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D JDY09_04930 site-2 protease family protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JDY09_01110 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D JDY09_00345 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDY09_06845 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDY09_08560 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JDY09_06320 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JDY09_09525 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JDY09_01290 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JDY09_03645 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JDY09_03075 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JDY09_04055 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDY09_02825 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D JDY09_02710 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JDY09_00355 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D JDY09_01985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D JDY09_06860 TldD/PmbA family protein K03592 pmbA; PmbA protein
D JDY09_06865 TldD/PmbA family protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:talu01003]
D JDY09_09450 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D JDY09_09645 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDY09_08960 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JDY09_02240 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDY09_09680 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D JDY09_09180 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:talu01005]
D JDY09_02240 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:talu01011]
D JDY09_04550 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDY09_03740 murB; UDP-N-acetylmuramate dehydrogenase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JDY09_03725 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDY09_03710 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDY09_00090 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_09855 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDY09_06785 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JDY09_03720 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDY09_03735 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDY09_00120 hypothetical protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDY09_02860 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDY09_06150 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JDY09_09645 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JDY09_06260 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JDY09_03695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JDY09_00080 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D JDY09_00345 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDY09_06845 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDY09_08560 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JDY09_03215 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JDY09_05975 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D JDY09_05735 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JDY09_09480 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:talu01004]
D JDY09_07830 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDY09_07825 beta-ketoacyl-ACP synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JDY09_07810 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JDY09_07820 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_08390 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDY09_07805 fabI; enoyl-ACP reductase FabI K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D JDY09_09230 fabI; enoyl-ACP reductase FabI K11611 inhA; meromycolic acid enoyl-[acyl-carrier-protein] reductase [EC:1.3.1.118]
D JDY09_04460 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D JDY09_03125 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_04170 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDY09_03445 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D JDY09_08540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JDY09_04000 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JDY09_01095 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDY09_08405 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:talu01008]
D JDY09_01785 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:talu01006]
D JDY09_05590 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JDY09_09770 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JDY09_04910 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JDY09_02345 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D JDY09_05120 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JDY09_04415 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDY09_06650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:talu01007]
D JDY09_04285 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDY09_04525 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDY09_03780 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JDY09_07730 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDY09_02960 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDY09_01345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDY09_09460 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDY09_06300 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDY09_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDY09_07780 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDY09_05775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDY09_05780 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDY09_01315 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDY09_00985 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDY09_04945 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDY09_04205 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDY09_05745 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDY09_04230 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDY09_04235 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDY09_05110 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D JDY09_03815 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_07100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08550 histidinol-phosphate aminotransferase family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDY09_08440 bioF; 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JDY09_08125 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JDY09_04255 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDY09_08475 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JDY09_09800 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JDY09_04495 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDY09_09740 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450 [BR:talu00199]
D JDY09_05045 cytochrome P450 K24241 CYP135; cytochrome P450 family 135 [EC:1.14.-.-]
C 00194 Photosynthesis proteins [BR:talu00194]
D JDY09_02305 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JDY09_02300 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JDY09_02295 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JDY09_02290 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JDY09_02285 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JDY09_02280 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDY09_02275 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JDY09_02270 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:talu03000]
D JDY09_08110 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JDY09_00525 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D JDY09_07220 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D JDY09_02050 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D JDY09_03510 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D JDY09_09345 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JDY09_09155 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D JDY09_02210 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JDY09_09585 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JDY09_05895 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D JDY09_02325 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JDY09_07180 helix-turn-helix domain-containing protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D JDY09_09870 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDY09_07755 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JDY09_06125 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JDY09_05340 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDY09_01170 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D JDY09_03680 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:talu03021]
D JDY09_08585 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDY09_08770 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDY09_08765 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDY09_05290 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDY09_01030 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_01570 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_01945 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_02755 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_05520 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_06140 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_08820 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JDY09_08525 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDY09_02095 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDY09_08245 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDY09_01760 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDY09_05760 SigB/SigF/SigG family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D JDY09_07720 sigH; RNA polymerase sporulation sigma factor SigH K27000 sigH; RNA polymerase sigma-H factor
D JDY09_04130 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_04695 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_05255 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JDY09_05600 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JDY09_08795 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D JDY09_09750 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D JDY09_09670 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JDY09_07785 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:talu03019]
D JDY09_06250 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D JDY09_04010 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDY09_05175 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDY09_09240 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D JDY09_09420 HDIG domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D JDY09_00805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDY09_01475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDY09_05200 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JDY09_00510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDY09_09365 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDY09_06780 HD domain-containing protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JDY09_01520 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JDY09_04640 carbon storage regulator K03563 csrA; carbon storage regulator
D JDY09_02900 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:talu03011]
D JDY09_05985 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JDY09_04890 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JDY09_08690 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JDY09_08590 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JDY09_08635 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JDY09_09685 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JDY09_08745 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JDY09_08650 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JDY09_06815 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JDY09_08725 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JDY09_08595 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JDY09_08750 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JDY09_08600 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JDY09_08655 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JDY09_05215 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JDY09_08675 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JDY09_09695 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JDY09_08700 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JDY09_06155 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JDY09_08785 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JDY09_08705 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JDY09_08720 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JDY09_08715 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JDY09_08660 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JDY09_08645 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JDY09_09700 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JDY09_08780 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JDY09_08790 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JDY09_08775 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JDY09_06820 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JDY09_08670 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JDY09_08625 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JDY09_08685 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JDY09_08580 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JDY09_08640 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JDY09_04050 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JDY09_04220 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JDY09_06245 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JDY09_08695 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JDY09_08710 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JDY09_08665 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JDY09_06240 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JDY09_03960 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JDY09_08680 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JDY09_08630 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JDY09_02200 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JDY09_03995 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JDY09_08805 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JDY09_09905 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JDY09_04215 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JDY09_08605 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JDY09_01450 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JDY09_04540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDY09_04535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:talu03009]
D JDY09_04010 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDY09_06090 era; GTPase Era K03595 era; GTPase
D JDY09_06235 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JDY09_05255 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JDY09_05600 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JDY09_08795 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D JDY09_01355 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JDY09_03975 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JDY09_09880 class I SAM-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JDY09_03685 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JDY09_01335 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JDY09_05575 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JDY09_07725 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JDY09_02955 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JDY09_03795 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JDY09_00465 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JDY09_03800 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JDY09_04630 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JDY09_05910 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JDY09_04040 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D JDY09_06115 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JDY09_06250 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D JDY09_05740 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JDY09_00805 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDY09_03835 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D JDY09_05100 hflX; GTPase HflX K03665 hflX; GTPase
D JDY09_02230 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JDY09_05405 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JDY09_05235 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JDY09_05260 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D JDY09_06210 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JDY09_06095 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JDY09_02600 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D JDY09_09485 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D JDY09_03990 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:talu03016]
D JDY09_05345 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JDY09_04590 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JDY09_02770 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D JDY09_04285 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDY09_04945 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDY09_09460 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDY09_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDY09_01345 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDY09_02960 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDY09_07780 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDY09_05775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDY09_05745 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDY09_01315 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDY09_04205 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDY09_00985 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDY09_07730 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDY09_06300 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDY09_05780 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDY09_04230 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDY09_04235 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDY09_04525 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDY09_03780 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JDY09_05270 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JDY09_06775 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JDY09_08575 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JDY09_05225 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JDY09_02230 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JDY09_05120 hypothetical protein K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JDY09_09900 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JDY09_06900 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JDY09_06335 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D JDY09_05145 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D JDY09_01115 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JDY09_05130 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JDY09_04045 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JDY09_04225 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JDY09_05770 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JDY09_03430 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D JDY09_03330 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D JDY09_02930 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JDY09_01000 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JDY09_07865 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JDY09_05915 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JDY09_05905 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JDY09_05920 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JDY09_05200 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:talu03012]
D JDY09_05245 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JDY09_04210 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JDY09_04895 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D JDY09_08730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JDY09_04135 fusA; elongation factor G K02355 fusA; elongation factor G
D JDY09_08735 fusA; elongation factor G K02355 fusA; elongation factor G
D JDY09_02220 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JDY09_04905 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JDY09_02225 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JDY09_01455 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JDY09_06760 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JDY09_05605 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:talu03110]
D JDY09_00530 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JDY09_07775 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JDY09_06315 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JDY09_00510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDY09_09365 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDY09_00520 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDY09_06120 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDY09_00515 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JDY09_01285 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D JDY09_02925 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D JDY09_05700 co-chaperone GroES K04078 groES; chaperonin GroES
D JDY09_09360 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JDY09_02645 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDY09_07855 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDY09_09505 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDY09_02270 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JDY09_01110 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-]
D JDY09_09455 trxA; thioredoxin K03671 TXN; thioredoxin
D JDY09_05060 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D JDY09_05540 hypothetical protein K03676 grxC; glutaredoxin 3
D JDY09_08280 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D JDY09_01390 TlpA family protein disulfide reductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:talu04131]
D JDY09_06285 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDY09_08035 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JDY09_02905 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDY09_08130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:talu03032]
D JDY09_04150 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JDY09_06855 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JDY09_00005 ATP-binding protein K02313 dnaA; chromosomal replication initiator protein
D JDY09_09705 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JDY09_09690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDY09_04270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDY09_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDY09_06160 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDY09_08855 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDY09_01200 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDY09_04060 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JDY09_06000 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDY09_08565 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDY09_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDY09_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDY09_07450 DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:talu03036]
D JDY09_04010 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDY09_06855 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JDY09_00005 ATP-binding protein K02313 dnaA; chromosomal replication initiator protein
D JDY09_04015 AAA family ATPase K03529 smc; chromosome segregation protein
D JDY09_03785 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JDY09_03790 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D JDY09_02700 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JDY09_03695 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JDY09_05160 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JDY09_03745 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D JDY09_03730 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JDY09_02705 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D JDY09_01980 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDY09_03750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDY09_06275 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JDY09_06270 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JDY09_06255 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D JDY09_01975 ParA family protein K03496 parA; chromosome partitioning protein
D JDY09_07500 ParA family protein K03496 parA; chromosome partitioning protein
D JDY09_09875 ParA family protein K03496 parA; chromosome partitioning protein
D JDY09_09870 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDY09_09880 class I SAM-dependent methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JDY09_04125 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D JDY09_05550 tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D JDY09_09380 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:talu03400]
D JDY09_01010 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JDY09_01990 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D JDY09_04515 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JDY09_00505 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JDY09_05095 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JDY09_05925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDY09_08110 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JDY09_05545 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDY09_09335 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JDY09_04280 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JDY09_05410 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JDY09_08565 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDY09_06000 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDY09_05960 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JDY09_05970 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JDY09_02895 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JDY09_04335 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDY09_08770 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDY09_08765 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDY09_08585 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDY09_05290 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDY09_01460 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JDY09_04270 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDY09_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDY09_06160 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDY09_08855 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDY09_01200 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDY09_09690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDY09_00630 hypothetical protein K03553 recA; recombination protein RecA
D JDY09_05140 recA; recombinase RecA K03553 recA; recombination protein RecA
D JDY09_05440 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JDY09_05435 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JDY09_05445 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JDY09_03855 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JDY09_01775 DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D JDY09_07770 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JDY09_00015 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JDY09_03970 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JDY09_05535 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JDY09_01210 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JDY09_05565 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JDY09_07070 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JDY09_02780 ligD; non-homologous end-joining DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JDY09_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDY09_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDY09_06855 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JDY09_03075 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JDY09_05640 hypothetical protein K14161 imuB; protein ImuB
D JDY09_05630 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D JDY09_05135 regulatory protein RecX K03565 recX; regulatory protein
D JDY09_09445 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D JDY09_09320 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D JDY09_08870 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDY09_01560 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDY09_08425 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDY09_05230 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:talu03029]
D JDY09_05245 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JDY09_04210 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JDY09_04895 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D JDY09_08730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JDY09_04135 fusA; elongation factor G K02355 fusA; elongation factor G
D JDY09_08735 fusA; elongation factor G K02355 fusA; elongation factor G
D JDY09_06090 era; GTPase Era K03595 era; GTPase
D JDY09_04525 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDY09_06185 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDY09_05775 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDY09_01315 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDY09_02960 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDY09_04365 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDY09_04370 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JDY09_04360 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JDY09_09690 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDY09_00510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDY09_00515 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JDY09_09365 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDY09_05700 co-chaperone GroES K04078 groES; chaperonin GroES
D JDY09_09360 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JDY09_00520 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDY09_06120 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDY09_08280 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D JDY09_09380 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JDY09_06650 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDY09_06645 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDY09_09890 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:talu02000]
D JDY09_05830 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JDY09_05835 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JDY09_07955 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JDY09_07950 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JDY09_07945 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D JDY09_07940 TOBE-like domain-containing protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JDY09_00270 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D JDY09_00265 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D JDY09_07325 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JDY09_07320 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JDY09_07315 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JDY09_02735 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JDY09_02100 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JDY09_08100 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D JDY09_08095 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D JDY09_08090 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D JDY09_02740 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein
D JDY09_08200 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDY09_08205 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDY09_08195 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JDY09_00725 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JDY09_00720 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JDY09_00715 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JDY09_00710 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDY09_01725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDY09_01715 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JDY09_01720 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JDY09_01705 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JDY09_01710 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JDY09_05755 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JDY09_00330 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D JDY09_00335 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D JDY09_00340 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D JDY09_07675 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JDY09_07535 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JDY09_07545 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein
D JDY09_03505 zinc ABC transporter substrate-binding protein K09818 ABC.MN.S; manganese/iron transport system substrate-binding protein
D JDY09_07540 metal ABC transporter ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D JDY09_02500 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JDY09_07005 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D JDY09_07000 ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D JDY09_09210 hypothetical protein K25149 narB; polyether ionophore transport system permease protein
D JDY09_09215 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D JDY09_09555 ccsA; cytochrome c biogenesis protein CcsA K02195 ccmC; heme exporter protein C
D JDY09_09550 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D JDY09_02705 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D JDY09_02700 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JDY09_02495 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDY09_08895 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDY09_09310 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDY09_09325 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDY09_09815 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDY09_06460 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_07295 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_08890 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_09305 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_09330 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_09545 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_09820 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDY09_02030 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JDY09_03365 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JDY09_02025 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDY09_03370 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDY09_09295 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JDY09_03530 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDY09_09125 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D JDY09_03355 aquaporin K02440 glpF; glycerol uptake facilitator
D JDY09_03305 ion transporter K08714 VGSC; voltage-gated sodium channel
D JDY09_07195 ammonium transporter K03320 amt; ammonium transporter, Amt family
D JDY09_03000 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D JDY09_04805 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JDY09_04810 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JDY09_05375 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D JDY09_01175 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D JDY09_07655 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDY09_02785 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JDY09_09205 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D JDY09_05995 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JDY09_06110 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D JDY09_06340 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D JDY09_05850 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D JDY09_05855 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JDY09_03335 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D JDY09_08035 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JDY09_06150 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JDY09_02055 hypothetical protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D JDY09_03730 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JDY09_05875 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D JDY09_08370 acyl-CoA carboxylase subunit beta K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D JDY09_02970 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JDY09_02410 P-loop NTPase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JDY09_03190 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JDY09_03050 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D JDY09_08885 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:talu02044]
D JDY09_05690 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JDY09_05090 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JDY09_05720 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JDY09_05710 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JDY09_05685 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JDY09_01950 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JDY09_05715 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JDY09_03635 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D JDY09_03665 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JDY09_04620 YggT family protein K02221 yggT; YggT family protein
D JDY09_06170 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D JDY09_06165 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D JDY09_04850 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JDY09_04845 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JDY09_04690 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D JDY09_04740 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JDY09_04750 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D JDY09_04755 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JDY09_04820 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JDY09_04830 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JDY09_04835 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JDY09_04840 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JDY09_02605 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDY09_05425 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D JDY09_08800 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JDY09_03060 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JDY09_08620 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JDY09_04025 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDY09_04020 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDY09_09890 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDY09_01750 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JDY09_07260 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D JDY09_01755 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:talu02042]
D JDY09_07655 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDY09_02370 alkaline phosphatase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:talu02022]
D JDY09_03625 response regulator transcription factor K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D JDY09_09660 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D JDY09_05165 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA
D JDY09_00240 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDY09_00245 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JDY09_07285 sensor histidine kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDY09_08000 HAMP domain-containing protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:talu02035]
D JDY09_04750 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D JDY09_04755 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JDY09_04770 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D JDY09_04830 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JDY09_04835 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JDY09_04840 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JDY09_04850 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JDY09_04845 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JDY09_04745 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JDY09_04760 FliM/FliN family flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D JDY09_04820 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D JDY09_04740 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D JDY09_04735 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JDY09_04725 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JDY09_04730 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JDY09_04785 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D JDY09_04680 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF
D JDY09_04670 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D JDY09_04795 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D JDY09_04655 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JDY09_04650 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JDY09_04635 flagellin K02406 fliC; flagellin
D JDY09_04880 flagellin K02406 fliC; flagellin
D JDY09_04710 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JDY09_04715 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JDY09_04130 whiG; RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_04695 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JDY09_04805 flagellar motor protein K02556 motA; chemotaxis protein MotA
D JDY09_04810 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D JDY09_04645 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D JDY09_04800 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D JDY09_01950 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JDY09_05715 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JDY09_05090 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JDY09_05720 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JDY09_05710 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JDY09_05690 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JDY09_05685 pilM; pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D JDY09_03635 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D JDY09_03665 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:talu04812]
D JDY09_06275 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JDY09_01980 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDY09_03750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDY09_01975 ParA family protein K03496 parA; chromosome partitioning protein
D JDY09_07500 ParA family protein K03496 parA; chromosome partitioning protein
D JDY09_09875 ParA family protein K03496 parA; chromosome partitioning protein
D JDY09_09870 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:talu04147]
D JDY09_01475 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDY09_02905 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDY09_02910 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDY09_08130 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDY09_09365 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDY09_00510 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JDY09_06835 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDY09_08730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JDY09_06775 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JDY09_08540 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JDY09_01900 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02125 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDY09_02580 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDY09_08615 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDY09_04970 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDY09_04510 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDY09_04260 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDY09_06700 hypothetical protein K00849 galK; galactokinase [EC:2.7.1.6]
D JDY09_08410 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDY09_03105 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_07185 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDY09_09810 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JDY09_07670 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JDY09_04440 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDY09_00590 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDY09_00415 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDY09_02180 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JDY09_06675 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDY09_02915 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:talu02048]
D JDY09_07070 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JDY09_07075 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JDY09_07050 cas7u; type I-U CRISPR-associated protein Cas7 K19131 csb1; CRISPR-associated protein Csb1
D JDY09_06410 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D JDY09_09315 restriction endonuclease K07448 mrr; restriction system protein
D JDY09_01980 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDY09_03750 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDY09_06275 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JDY09_04285 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:talu03100]
D JDY09_05515 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDY09_04535 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDY09_04540 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JDY09_06605 FAD-binding protein K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D JDY09_07340 iron-containing redox enzyme family protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D JDY09_03410 npdG; NADPH-dependent F420 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JDY09_02185 4Fe-4S dicluster domain-containing protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D JDY09_01700 zinc-dependent alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDY09_09370 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JDY09_08105 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JDY09_07215 manganese catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D JDY09_00850 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JDY09_05050 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JDY09_08255 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JDY09_06345 phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JDY09_00535 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDY09_02490 class I SAM-dependent methyltransferase K05303 K05303; O-methyltransferase [EC:2.1.1.-]
D JDY09_01080 bis-aminopropyl spermidine synthase family protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D JDY09_07550 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JDY09_03965 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JDY09_07760 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D JDY09_00690 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JDY09_01350 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JDY09_00210 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D JDY09_02135 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170]
D JDY09_03860 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JDY09_08345 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D JDY09_01195 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D JDY09_09580 SAM-dependent chlorinase/fluorinase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D JDY09_06795 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JDY09_03565 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D JDY09_09290 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JDY09_02175 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D JDY09_01915 dodecin domain-containing protein K09165 K09165; dodecin
D JDY09_03380 hypothetical protein K24619 mauC; amicyanin
C 99983 Lipid metabolism
D JDY09_02355 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
D JDY09_08290 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D JDY09_04195 aminotransferase class V-fold PLP-dependent enzyme K11325 K11325; L-cysteine/cystine lyase
D JDY09_04600 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D JDY09_00855 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D JDY09_03915 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D JDY09_01025 alpha/beta fold hydrolase K24084 aidA; quorum-quenching protein AidA
C 99999 Others
D JDY09_01075 VOC family protein K15975 K15975; glyoxalase family protein
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JDY09_06765 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D JDY09_03295 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D JDY09_06325 trigger factor K03545 tig; trigger factor
D JDY09_02720 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JDY09_04070 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D JDY09_06495 OsmC family protein K07397 yhfA; putative redox protein
D JDY09_07110 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D JDY09_04065 YraN family protein K07460 yraN; putative endonuclease
D JDY09_06425 PD-(D/E)XK nuclease family protein K07465 K07465; putative RecB family exonuclease
D JDY09_04075 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D JDY09_09535 replication-associated recombination protein A K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D JDY09_07600 PspA/IM30 family protein K03969 pspA; phage shock protein A
D JDY09_01205 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D JDY09_09885 KH domain-containing protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D JDY09_06100 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D JDY09_03045 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JDY09_09185 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D JDY09_01305 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JDY09_03110 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JDY09_05015 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JDY09_00825 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D JDY09_07395 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D JDY09_09630 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JDY09_09280 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JDY09_09275 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D JDY09_03480 phosphotriesterase K07048 PTER; phosphotriesterase-related protein
D JDY09_07835 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JDY09_07390 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D JDY09_01145 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein
D JDY09_02590 cytochrome c oxidase assembly protein K02862 ctaG; putative membrane protein
C 99997 Function unknown
D JDY09_03115 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D JDY09_04035 KH domain-containing protein K06960 K06960; uncharacterized protein
D JDY09_06010 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D JDY09_08450 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JDY09_09115 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JDY09_09425 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JDY09_09430 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JDY09_02695 metallophosphoesterase family protein K07096 K07096; uncharacterized protein
D JDY09_03065 hypothetical protein K07096 K07096; uncharacterized protein
D JDY09_03350 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D JDY09_05025 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D JDY09_08085 VWA domain-containing protein K07161 K07161; uncharacterized protein
D JDY09_09895 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JDY09_09860 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D JDY09_06105 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D JDY09_01180 DUF190 domain-containing protein K09137 K09137; uncharacterized protein
D JDY09_00135 DUF354 domain-containing protein K09726 K09726; uncharacterized protein
D JDY09_05240 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D JDY09_02310 YceH family protein K09915 K09915; uncharacterized protein
D JDY09_04105 hypothetical protein K05967 K05967; uncharacterized protein
D JDY09_04190 DUF47 family protein K07220 K07220; uncharacterized protein
D JDY09_05250 YlxR family protein K07742 ylxR; uncharacterized protein
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#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024