+F Repair protein KO #

  DNA Repair and Recombination Proteins - Theileria annulata

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D TA20175 DEAD-box helicase, putative K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4] C BER (base exicision repair) D DNA glycosylases E TA12830 uracil-DNA glycosylase, putative K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E TA16100 7,8 dihydro-8-oxoguanine DNA glycosylase, putative K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] E TA05440 endonuclease III, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E TA12590 apurinic/apyrimidinic endonuclease Apn1-like, putative K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2] D Long Patch-BER factors E DNA polymerase delta complex F TA06290 DNA polymerase delta catalytic subunit (Pold1 homologue), putative K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] F TA13340 DNA polymerase delta small subunit, putative K02328 POLD2; DNA polymerase delta subunit 2 E DNA polymerase epsilon complex F TA09840 DNA polymerase epsilon (catalytic subunit), putative K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7] F TA12280 hypothetical protein, conserved K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F TA12275 SfiI-subtelomeric fragment related protein family member, putative K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] F TA12265 SfiI-subtelomeric fragment related protein family member, putative K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7] E TA14075 proliferating cell nuclear antigen 2 (PCNA2), putative K04802 PCNA; proliferating cell nuclear antigen E TA04590 proliferating cell nuclear antigen (PCNA) 1, putative K04802 PCNA; proliferating cell nuclear antigen E TA15785 5'-3' exonuclease, putative K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] E TA05175 DNA ligase 1 (precursor), putative K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Short Patch-BER factors D Other BER factors E TA20015 polynucleotide kinase 3'-phosphatase-like protein, putative K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78] C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex F TA05020 hypothetical protein, conserved K10838 XPC; xeroderma pigmentosum group C-complementing protein F TA06130 DNA repair protein (RAD23 homologue), putative K10839 RAD23; UV excision repair protein RAD23 E Cul4-DDB2 complex F TA10565 hypothetical protein, conserved K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F TA19595 damage-specific DNA binding protein 1, putative K10610 DDB1; DNA damage-binding protein 1 E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex F TA03235 DNA-directed RNA polymerase II largest subunit, putative K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] F TA07925 DNA-directed RNA polymerase II subunit, putative K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] F TA19735 DNA-directed RNA polymerase ii, putative K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 F TA12735 RNA polymerase 16kd subunit, RPB4-like, putative K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 F TA10195 DNA-directed RNA polymerase, subunit (RPB5 homologue), putative K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 F TA08570 RNA polymerase common subunit (Rpb6 homologue), putative K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 F TA19500 DNA-directed RNA polymerase ii, putative K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 F TA19535 DNA-directed RNA polymerases i, ii, and iii 17.1 kDa polypeptide, putative K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 F TA11880 DNA-directed RNA polymerase 2 subunit, putative K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 F TA02635 DNA-directed RNA polymerase II, putative K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 E Cul4-CSA complex F TA10565 hypothetical protein, conserved K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] F TA19595 damage-specific DNA binding protein 1, putative K10610 DDB1; DNA damage-binding protein 1 E Other TCR factor F TA17205 DNA repair helicase, putative K10841 ERCC6; DNA excision repair protein ERCC-6 F TA05165 hypothetical protein, conserved K25829 ELOF1; transcription elongation factor 1 D TFIIH complex E TA11585 DNA repair helicase, putative K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] E TA19155 rad3-like DNA helicase-related, putative K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] E TA04780 hypothetical protein, conserved K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 E TA11370 hypothetical protein, conserved K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 E TA16710 TFIIH subunit, Tf2b homologue, putative K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 E TA04975 hypothetical protein, conserved K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit E TA07000 cyclin-dependent kinase CRK3 (CDK7 homologue), putative K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] E TA11045 cyclin, putative K06634 CCNH; cyclin H E TA13640 CDK-activating kinase assembly factor, putative K10842 MNAT1; CDK-activating kinase assembly factor MAT1 D RPA (replication factor A) E TA15495 replication factor-a protein 1, putative K07466 RFA1; replication factor A1 E TA11650 hypothetical protein K10739 RFA2; replication factor A2 D Other NER factors E TA16745 DNA repair protein (RAD10 homologue), putative K10849 ERCC1; DNA excision repair protein ERCC-1 E TA04325 DNA repair (RAD6) endonuclease, putative K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] E TA08900 endonuclease (xp-g/RAD2 homologue), putative K10846 ERCC5; DNA excision repair protein ERCC-5 E TA05175 DNA ligase 1 (precursor), putative K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] E TA06585 hypothetical protein, conserved K15075 MET18; DNA repair/transcription protein MET18/MMS19 C MMR (mismatch excision repair) D Mismatch and loop recognition factors E TA20735 DNA mismatch repair protein msh2, putative K08735 MSH2; DNA mismatch repair protein MSH2 E TA19305 DNA mismatch repair protein, MutS family, putative K08737 MSH6; DNA mismatch repair protein MSH6 D MutL homologs E TA06860 DNA mismatch repair (MLH1 homologue), putative K08734 MLH1; DNA mismatch repair protein MLH1 E TA04865 DNA mismatch repair protein, putative K10858 PMS2; DNA mismatch repair protein PMS2 D DNA polymerase delta complex E TA06290 DNA polymerase delta catalytic subunit (Pold1 homologue), putative K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7] E TA13340 DNA polymerase delta small subunit, putative K02328 POLD2; DNA polymerase delta subunit 2 D RPA (replication factor A) E TA15495 replication factor-a protein 1, putative K07466 RFA1; replication factor A1 E TA11650 hypothetical protein K10739 RFA2; replication factor A2 D RFC (replication factor C) E TA18630 replication factor c-related protein, putative K10754 RFC1; replication factor C subunit 1 E TA16350 replication factor C subunit (RPC2 homologue), putative K10755 RFC2_4; replication factor C subunit 2/4 E TA04525 replication factor, putative K10755 RFC2_4; replication factor C subunit 2/4 E TA08130 replication factor C subunit, putative K10756 RFC3_5; replication factor C subunit 3/5 E TA17080 replication factor C subunit, putative K10756 RFC3_5; replication factor C subunit 3/5 D Other MMR factors E TA14075 proliferating cell nuclear antigen 2 (PCNA2), putative K04802 PCNA; proliferating cell nuclear antigen E TA04590 proliferating cell nuclear antigen (PCNA) 1, putative K04802 PCNA; proliferating cell nuclear antigen E TA09295 exonuclease 1, putative K10746 EXO1; exonuclease 1 [EC:3.1.-.-] E TA05175 DNA ligase 1 (precursor), putative K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex E TA10845 double-strand break repair protein, putative K10865 MRE11; double-strand break repair protein MRE11 E TA11630 DNA repair protein rad50, putative K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex E TA10845 double-strand break repair protein, putative K10865 MRE11; double-strand break repair protein MRE11 E TA11630 DNA repair protein rad50, putative K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D BRCA complex E TA07350 DNA repair (Rad51 homologue) protein, putative K04482 RAD51; DNA repair protein RAD51 D RecA family proteins E TA07350 DNA repair (Rad51 homologue) protein, putative K04482 RAD51; DNA repair protein RAD51 D Rad52 family proteins D Rad54 family proteins E TA05745 recombinational repair (RAD54 homologue) protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-] D RecQ family DNA helicases E TA13565 DNA helicase (SGS1 homologue), putative K10901 BLM; bloom syndrome protein [EC:5.6.2.4] D Bloom's syndrome complex (BTR) E TA13565 DNA helicase (SGS1 homologue), putative K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E TA17755 DNA topoisomerase iii, putative K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D RPA (replication factor A) E TA15495 replication factor-a protein 1, putative K07466 RFA1; replication factor A1 E TA11650 hypothetical protein K10739 RFA2; replication factor A2 D Protein phosphatase 4 E TA12805 serine/threonine protein phosphatase pp-x isozyme 1, putative K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16] E TA14035 hypothetical protein K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2 E TA18585 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3 D AP-5 complex D SMC5-SMC6 complex E TA08750 chromosome maintenance protein (SMC5 homologue), putative K22803 SMC5; structural maintenance of chromosomes protein 5 E TA18975 SMC-like protein, putative K22804 SMC6; structural maintenance of chromosomes protein 6 E TA20410 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-] D Other HR factors E TA04250 hypothetical protein, conserved K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-] E TA07700 hypothetical protein, conserved K10881 SHFM1; 26 proteasome complex subunit DSS1 E TA15825 26S protease subunit, putative K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-] E TA02880 minichromosome maintenance (MCM), putative K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4] E TA08800 DNA replication protein (MCM homologue), putative K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4] C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex E TA10845 double-strand break repair protein, putative K10865 MRE11; double-strand break repair protein MRE11 E TA11630 DNA repair protein rad50, putative K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-] D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) E TA13565 DNA helicase (SGS1 homologue), putative K10901 BLM; bloom syndrome protein [EC:5.6.2.4] E TA17755 DNA topoisomerase iii, putative K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1] D FANCD2-I complex D Downstream FA components D Other FA pathway factors E TA07350 DNA repair (Rad51 homologue) protein, putative K04482 RAD51; DNA repair protein RAD51 C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others E TA03685 hypothetical protein, conserved K23314 WRAP53; telomerase Cajal body protein 1 B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases D TA15860 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-] C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group D TA03980 ubiquitin-conjugating enzyme E2, putative K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23] D TA12340 ubiquitin-conjugating enzyme E2, putative K10574 UBE2B; ubiquitin-conjugating enzyme E2 B [EC:2.3.2.23] D TA02645 ubiquitin-conjugating enzyme (MMS homologue), putative K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant D TA20510 ubiquitin-conjugating enzyme e2, putative K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23] C Other TLS factors D TA14075 proliferating cell nuclear antigen 2 (PCNA2), putative K04802 PCNA; proliferating cell nuclear antigen D TA04590 proliferating cell nuclear antigen (PCNA) 1, putative K04802 PCNA; proliferating cell nuclear antigen B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex D TA16350 replication factor C subunit (RPC2 homologue), putative K10755 RFC2_4; replication factor C subunit 2/4 D TA04525 replication factor, putative K10755 RFC2_4; replication factor C subunit 2/4 D TA08130 replication factor C subunit, putative K10756 RFC3_5; replication factor C subunit 3/5 D TA17080 replication factor C subunit, putative K10756 RFC3_5; replication factor C subunit 3/5 C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex D TA05225 hypothetical protein, conserved K23387 GET4; golgi to ER traffic protein 4 C Other check point factors D TA14115 14-3-3 protein homologue, putative K06630 YWHAE; 14-3-3 protein epsilon D TA04080 AAA family ATPase, putative K12196 VPS4; vacuolar protein-sorting-associated protein 4 B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases D TA19785 hypothetical protein, conserved K17815 EXO5; exonuclease V [EC:3.1.-.-] C Helicases C PSO4 complex D TA03395 hypothetical protein, conserved K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27] D TA17065 Myb-like DNA binding protein (CDC5 homologue), putative K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1 D TA14630 hypothetical protein, conserved K12861 BCAS2; pre-mRNA-splicing factor SPF27 D TA10595 hypothetical protein, conserved K12862 PLRG1; pleiotropic regulator 1 C Modulation of nucleotide pools D TA20975 deoxyuridine 5'-triphosphate nucleotidohydrolase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D TA05060 ribonucleoside-diphosphate reductase large chain, putative K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1] D TA06715 ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate reductase small chain, putative K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] D TA09665 ribonucleoside reductase, putative K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair C BER (base exicision repair) D DNA glycosylases E TA12830 uracil-DNA glycosylase, putative K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E TA05440 endonuclease III, putative K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D RecJ D DNA ligase D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F TA18990 DNA-directed RNA polymerase alpha chain, putative K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F TA03310 DNA-directed RNA polymerase D subunit, putative K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme D DNA ligase D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins D RecFOR pathway proteins D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F TA14985 topoisomerase IV subunit A, putative K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F TA16475 DNA topoisomerase II, putative K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] E Supressor D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway E Facilitator E Supressor F TA08755 DNA helicase (SGS1 homologue), putative K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D TA20975 deoxyuridine 5'-triphosphate nucleotidohydrolase, putative K01520 dut; dUTP diphosphatase [EC:3.6.1.23] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024