+D GENES KO
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KEGG Orthology (KO) - Thermodesulfovibrio autotrophicus
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:taut00010]
D V4D30_03600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D V4D30_08235 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D V4D30_06340 pfp; (GenBank) diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D V4D30_03095 fbp; (GenBank) class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D V4D30_06410 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D V4D30_06355 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D V4D30_02750 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D V4D30_02120 glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_03115 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_06855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_03110 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D V4D30_06860 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D V4D30_05295 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D V4D30_08420 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D V4D30_03305 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D V4D30_00175 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_03090 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_02760 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D V4D30_03675 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_04665 PEP/pyruvate-binding domain-containing protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_02340 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_05420 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_02335 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03030 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_01985 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_00640 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:taut00020]
D V4D30_00580 homocitrate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D V4D30_00575 isocitrate/isopropylmalate dehydrogenase family protein K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_02340 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_05420 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_02335 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03030 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03035 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D V4D30_02230 ferredoxin family protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D V4D30_04540 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D V4D30_04535 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D V4D30_04525 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D V4D30_04530 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00247 frdD; succinate dehydrogenase subunit D
D V4D30_09465 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D V4D30_09480 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D V4D30_09390 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D V4D30_09395 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:taut00030]
D V4D30_08235 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D V4D30_03080 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D V4D30_08710 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D V4D30_02665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03120 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03125 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_05540 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_05545 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03140 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D V4D30_06675 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D V4D30_03105 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D V4D30_09950 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_05090 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D V4D30_00320 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D V4D30_08330 aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D V4D30_06355 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D V4D30_03095 fbp; (GenBank) class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D V4D30_06410 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D V4D30_06340 pfp; (GenBank) diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:taut00040]
D V4D30_01690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D V4D30_03925 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D V4D30_03080 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D V4D30_08710 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D V4D30_03210 zinc-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D V4D30_09460 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D V4D30_06770 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:taut00051]
D V4D30_03620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_06770 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D V4D30_06340 pfp; (GenBank) diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D V4D30_03095 fbp; (GenBank) class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D V4D30_06410 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D V4D30_03210 zinc-dependent dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D V4D30_09460 alcohol dehydrogenase catalytic domain-containing protein K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D V4D30_06355 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D V4D30_02750 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D V4D30_03105 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D V4D30_09950 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:taut00052]
D V4D30_06555 galT; (GenBank) galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D V4D30_01225 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D V4D30_03925 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_03600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D V4D30_06340 pfp; (GenBank) diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D V4D30_03100 class II fructose-bisphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
C 00053 Ascorbate and aldarate metabolism [PATH:taut00053]
D V4D30_01690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D V4D30_10010 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:taut00500]
D V4D30_03925 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D V4D30_00105 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D V4D30_07780 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D V4D30_06430 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D V4D30_06560 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D V4D30_07625 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D V4D30_05275 glgP; (GenBank) alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D V4D30_08370 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D V4D30_07600 glycosyltransferase K13057 treT; trehalose synthase [EC:2.4.1.245]
D V4D30_07615 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D V4D30_07610 otsB; (GenBank) trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_03600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D V4D30_08235 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:taut00620]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_02340 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_05420 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_02335 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03030 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_01985 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D V4D30_00175 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_03090 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_04850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D V4D30_05665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D V4D30_05660 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D V4D30_09780 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D V4D30_04745 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D V4D30_00640 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D V4D30_02685 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D V4D30_04545 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D V4D30_09390 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D V4D30_09395 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D V4D30_09465 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D V4D30_09480 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D V4D30_04530 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00247 frdD; succinate dehydrogenase subunit D
D V4D30_02760 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D V4D30_03675 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_04665 PEP/pyruvate-binding domain-containing protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_01890 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D V4D30_03435 cimA; (GenBank) citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:taut00630]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_00230 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D V4D30_08540 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D V4D30_00235 (Fe-S)-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D V4D30_06260 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D V4D30_03135 rbcL; (GenBank) type III ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D V4D30_08400 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D V4D30_09945 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_03290 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D V4D30_04295 fdnG; (GenBank) formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D V4D30_00560 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D V4D30_04290 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D V4D30_00150 cytochrome b/b6 domain-containing protein K00127 fdoI; formate dehydrogenase subunit gamma
D V4D30_00155
C 00640 Propanoate metabolism [PATH:taut00640]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_00640 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_04850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D V4D30_05665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D V4D30_05660 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D V4D30_09780 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
C 00650 Butanoate metabolism [PATH:taut00650]
D V4D30_04540 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D V4D30_04535 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D V4D30_04525 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D V4D30_04530 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00247 frdD; succinate dehydrogenase subunit D
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_02340 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_05420 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_02335 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03030 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_00590 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D V4D30_00585 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:taut00660]
D V4D30_00590 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D V4D30_00585 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D V4D30_03960 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D V4D30_08300 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D V4D30_08305 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:taut00562]
D V4D30_01755 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D V4D30_03155 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D V4D30_09910 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D V4D30_02750 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:taut00190]
D V4D30_02835 ndhC; (GenBank) NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D V4D30_04195 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D V4D30_02820 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D V4D30_04190 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D V4D30_02840 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D V4D30_04185 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D V4D30_02825 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D V4D30_04180 nuoD; (GenBank) NADH dehydrogenase (quinone) subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D V4D30_02845 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D V4D30_04175 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D V4D30_02830 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D V4D30_04170 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D V4D30_02850 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D V4D30_04165 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D V4D30_02855 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D V4D30_04160 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D V4D30_04155 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D V4D30_02880 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D V4D30_04150 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D V4D30_02885 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D V4D30_04145 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D V4D30_04540 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D V4D30_04535 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D V4D30_04525 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D V4D30_04530 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00247 frdD; succinate dehydrogenase subunit D
D V4D30_02185 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D V4D30_02180 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D V4D30_06900 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D V4D30_06890 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D V4D30_06895 atpG; (GenBank) ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D V4D30_06905 atpH; (GenBank) ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D V4D30_06885 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D V4D30_05050 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D V4D30_06910 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D V4D30_06915 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D V4D30_05055 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D V4D30_03255 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:taut00710]
D V4D30_03135 rbcL; (GenBank) type III ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D V4D30_03110 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D V4D30_06860 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D V4D30_02120 glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_03115 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_06855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_06355 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D V4D30_03095 fbp; (GenBank) class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D V4D30_06410 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D V4D30_02665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03120 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03125 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_05540 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_05545 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03105 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D V4D30_09950 rpiB; (GenBank) ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D V4D30_03130 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D V4D30_02750 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D V4D30_03080 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D V4D30_08710 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D V4D30_03140 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D V4D30_06675 fsa; (GenBank) fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D V4D30_02760 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:taut00720]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_03675 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_04665 PEP/pyruvate-binding domain-containing protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_02760 ppdK; (GenBank) pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D V4D30_09390 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D V4D30_09395 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D V4D30_09465 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D V4D30_09480 Fe-S-containing hydro-lyase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D V4D30_04540 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D V4D30_04535 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D V4D30_04525 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D V4D30_04530 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00247 frdD; succinate dehydrogenase subunit D
D V4D30_02340 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_05420 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D V4D30_02335 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03030 thiamine pyrophosphate-dependent enzyme K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D V4D30_03035 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D V4D30_02230 ferredoxin family protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D V4D30_04850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D V4D30_05665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D V4D30_05660 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D V4D30_09780 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D V4D30_05620 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D V4D30_00200 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D V4D30_00190 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D V4D30_05225 dihydropteroate synthase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258]
D V4D30_05210 acsB; (GenBank) acetyl-CoA decarbonylase/synthase complex subunit alpha/beta K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169]
D V4D30_05215 acsC; (GenBank) acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D V4D30_05220 acetyl-CoA decarbonylase/synthase complex subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:taut00680]
D V4D30_04295 fdnG; (GenBank) formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D V4D30_00560 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D V4D30_04290 4Fe-4S dicluster domain-containing protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D V4D30_00150 cytochrome b/b6 domain-containing protein K00127 fdoI; formate dehydrogenase subunit gamma
D V4D30_05215 acsC; (GenBank) acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D V4D30_05220 acetyl-CoA decarbonylase/synthase complex subunit delta K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D V4D30_09945 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D V4D30_03305 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D V4D30_06355 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D V4D30_03095 fbp; (GenBank) class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D V4D30_06410 glpX; (GenBank) class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D V4D30_06340 pfp; (GenBank) diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D V4D30_09885 FmdE family protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D V4D30_02235 4Fe-4S binding protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D V4D30_10030 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D V4D30_10040 CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D V4D30_10035 4Fe-4S dicluster domain-containing protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D V4D30_10045 hydrogenase iron-sulfur subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6]
D V4D30_10060 Ni/Fe hydrogenase subunit alpha K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5]
D V4D30_10050 F420-nonreducing hydrogenase K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_03675 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_04665 PEP/pyruvate-binding domain-containing protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D V4D30_05295 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D V4D30_08420 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D V4D30_03590 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D V4D30_00155
C 00910 Nitrogen metabolism [PATH:taut00910]
D V4D30_02155 ammonia-forming cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D V4D30_02150 nrfH; (GenBank) cytochrome c nitrite reductase small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D V4D30_07035 hcp; (GenBank) hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D V4D30_08400 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D V4D30_08390 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:taut00920]
D V4D30_05910 sat; (GenBank) sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D V4D30_07260 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D V4D30_05895 aprA; (GenBank) adenylyl-sulfate reductase subunit alpha K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D V4D30_05900 aprB; (GenBank) adenylyl-sulfate reductase subunit beta K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D V4D30_08560 hypothetical protein K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D V4D30_08565 dsrB; (GenBank) dissimilatory-type sulfite reductase subunit beta K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
D V4D30_08090 dsrM; (GenBank) sulfate reduction electron transfer complex DsrMKJOP subunit DsrM K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10]
D V4D30_08085 (Fe-S)-binding protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10]
D V4D30_08080 dsrJ; (GenBank) sulfate reduction electron transfer complex DsrMKJOP subunit DsrJ K27189 dsrJ; [DsrC]-trisulfide reductase subunit J
D V4D30_08075 4Fe-4S dicluster domain-containing protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O
D V4D30_08070 nrfD; (GenBank) NrfD/PsrC family molybdoenzyme membrane anchor subunit K27191 dsrP; [DsrC]-trisulfide reductase subunit P
D V4D30_05980 4Fe-4S dicluster domain-containing protein K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D V4D30_02210 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D V4D30_02810 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:taut00061]
D V4D30_04850 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D V4D30_05665 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D V4D30_05660 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D V4D30_09780 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D V4D30_01335 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D V4D30_05750 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D V4D30_05585 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D V4D30_01340 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D V4D30_02425 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D V4D30_01330 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D V4D30_03645 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D V4D30_01985 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:taut00074]
D V4D30_09760 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D V4D30_01335 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
D V4D30_05750 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:taut00561]
D V4D30_05580 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D V4D30_06990 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D V4D30_07000 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:taut00564]
D V4D30_00270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D V4D30_06990 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D V4D30_07000 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D V4D30_06960 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D V4D30_01885 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D V4D30_01880 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D V4D30_06985 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D V4D30_09715 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D V4D30_08720 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D V4D30_07805 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:taut00230]
D V4D30_03450 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_05090 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D V4D30_02110 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D V4D30_03790 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D V4D30_01530 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D V4D30_03690 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D V4D30_04310 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D V4D30_01415 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D V4D30_05315 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D V4D30_09800 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D V4D30_03780 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D V4D30_06515 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D V4D30_07305 HAD-IA family hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D V4D30_05025 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D V4D30_05805 hpt; (GenBank) hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D V4D30_06735 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D V4D30_05740 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D V4D30_05920 XTP/dITP diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D V4D30_06740 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D V4D30_01725 mtnP; (GenBank) S-methyl-5'-thioadenosine phosphorylase K26211 K26211; guanosine phosphorylase [EC:2.4.2.15]
D V4D30_05690 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D V4D30_05360 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D V4D30_07935 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D V4D30_00795 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D V4D30_05395 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D V4D30_09755 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D V4D30_03280 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D V4D30_03025 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D V4D30_05060 CHASE2 domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D V4D30_07245 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D V4D30_08635 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D V4D30_03585 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D V4D30_00080 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D V4D30_05915 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D V4D30_06270 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D V4D30_04025 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D V4D30_05910 sat; (GenBank) sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:taut00240]
D V4D30_03775 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D V4D30_03765 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D V4D30_03755 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D V4D30_03760 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D V4D30_09860 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D V4D30_09865 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D V4D30_07360 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D V4D30_07390 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D V4D30_04985 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D V4D30_05740 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D V4D30_06270 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D V4D30_08065 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D V4D30_09235 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D V4D30_06515 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D V4D30_00080 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D V4D30_00795 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D V4D30_05395 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D V4D30_05360 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D V4D30_07935 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D V4D30_06380 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D V4D30_01815 thyX; (GenBank) FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:taut00250]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_00180 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D V4D30_01280 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D V4D30_01380 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D V4D30_02945 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D V4D30_09815 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D V4D30_03585 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D V4D30_09800 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D V4D30_03755 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D V4D30_08390 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D V4D30_08400 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D V4D30_03775 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D V4D30_03765 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D V4D30_07335 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D V4D30_02110 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:taut00260]
D V4D30_08910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D V4D30_08310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D V4D30_05490 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D V4D30_08425 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D V4D30_08440 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D V4D30_09945 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D V4D30_05295 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D V4D30_08420 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D V4D30_03590 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D V4D30_04515 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_03290 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D V4D30_01885 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D V4D30_09775 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D V4D30_09770 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D V4D30_08535 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:taut00270]
D V4D30_05390 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D V4D30_08315 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D V4D30_06870 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D V4D30_06865 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D V4D30_09295 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D V4D30_05025 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D V4D30_03330 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D V4D30_06505 mtnA; (GenBank) S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D V4D30_03225 cupin domain-containing protein K01767 cupin; S-methyl-1-thioxylulose 5-phosphate methylthiotransferase [EC:2.8.4.6]
D V4D30_08320 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D V4D30_08910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D V4D30_08310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D V4D30_05490 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D V4D30_02705 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_05745 mdh; (GenBank) malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D V4D30_01810 cysteine synthase family protein K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D V4D30_03590 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:taut00280]
D V4D30_02705 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:taut00290]
D V4D30_03960 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D V4D30_08300 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D V4D30_08305 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D V4D30_00590 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D V4D30_00585 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D V4D30_01875 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D V4D30_03935 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D V4D30_02705 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D V4D30_01890 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D V4D30_03435 cimA; (GenBank) citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:taut00300]
D V4D30_05490 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D V4D30_08910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D V4D30_08310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D V4D30_04400 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D V4D30_05350 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D V4D30_00215 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D V4D30_02780 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D V4D30_07965 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D V4D30_02785 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D V4D30_04490 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D V4D30_04485 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:taut00220]
D V4D30_00220 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D V4D30_02945 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D V4D30_09815 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D V4D30_08400 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D V4D30_03775 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D V4D30_03765 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_03040 N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D V4D30_08915 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D V4D30_00650 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D V4D30_09525 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D V4D30_00215 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:taut00330]
D V4D30_09290 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D V4D30_06865 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D V4D30_09295 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D V4D30_06870 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D V4D30_07730 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D V4D30_05180 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D V4D30_03460 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:taut00340]
D V4D30_05200 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D V4D30_03440 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D V4D30_06300 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D V4D30_07495 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D V4D30_06290 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D V4D30_01820 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D V4D30_01825 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_09280 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_05415 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:taut00350]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_01825 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_09280 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_01985 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:taut00360]
D V4D30_03360 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_01825 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_09280 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:taut00400]
D V4D30_05015 aroF; (GenBank) 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D V4D30_09275 aroF; (GenBank) 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D V4D30_07450 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D V4D30_07820 aroD; (GenBank) type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D V4D30_09605 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D V4D30_07455 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D V4D30_09240 aroA; (GenBank) 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D V4D30_03710 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D V4D30_05825 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D V4D30_05820 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D V4D30_05815 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D V4D30_01585 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D V4D30_03560 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D V4D30_08015 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D V4D30_09775 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D V4D30_09770 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D V4D30_08535 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D V4D30_09285 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D V4D30_09270 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_01825 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_09280 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:taut00410]
D V4D30_07320 panD; (GenBank) aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D V4D30_09500 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:taut00450]
D V4D30_05390 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D V4D30_03085 NAD(P)-binding domain-containing protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D V4D30_09145 NAD(P)-binding domain-containing protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D V4D30_09375 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D V4D30_05910 sat; (GenBank) sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D V4D30_06470 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D V4D30_09750 selA; (GenBank) L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D V4D30_06395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:taut00460]
D V4D30_00105 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D V4D30_07780 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D V4D30_09945 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:taut00470]
D V4D30_08860 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D V4D30_04445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D V4D30_09965 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D V4D30_04470 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D V4D30_02780 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D V4D30_02785 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:taut00480]
D V4D30_09290 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D V4D30_06865 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D V4D30_09295 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:taut00520]
D V4D30_07340 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D V4D30_03285 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D V4D30_04450 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D V4D30_03515 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D V4D30_07505 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D V4D30_07335 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D V4D30_08235 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D V4D30_03620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D V4D30_10010 SDR family NAD(P)-dependent oxidoreductase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D V4D30_03600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_03925 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D V4D30_01690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D V4D30_06555 galT; (GenBank) galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D V4D30_01225 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D V4D30_06430 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D V4D30_01230 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:taut00541]
D V4D30_07340 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D V4D30_01300 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D V4D30_01220 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D V4D30_06310 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D V4D30_05520 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D V4D30_08060 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D V4D30_04020 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D V4D30_07750 rfaE1; (GenBank) D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D V4D30_06765 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D V4D30_03925 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D V4D30_01690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D V4D30_01230 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D V4D30_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D V4D30_01250 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D V4D30_01260 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D V4D30_03620 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:taut00540]
D V4D30_03650 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D V4D30_04060 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D V4D30_03640 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D V4D30_03655 lpxI; (GenBank) UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D V4D30_04720 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D V4D30_08810 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D V4D30_04715 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D V4D30_08150 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D V4D30_03550 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D V4D30_03545 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D V4D30_09645 rfaQ; (GenBank) putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D V4D30_09650 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D V4D30_09630 glycosyltransferase K03280 waaK; UDP-N-acetylglucosamine:(glucosyl)LPS alpha-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.56]
D V4D30_09550
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:taut00550]
D V4D30_03285 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D V4D30_04450 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D V4D30_04455 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D V4D30_04470 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D V4D30_04490 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D V4D30_04445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D V4D30_04485 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D V4D30_06955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D V4D30_05455 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D V4D30_04480 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D V4D30_04460 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D V4D30_08365 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_00630 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D V4D30_04465 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05965 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05960 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D V4D30_04495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D V4D30_04475 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:taut00552]
D V4D30_05455 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:taut00730]
D V4D30_09150 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D V4D30_05310 thiD; (GenBank) bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D V4D30_04410 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D V4D30_01390 hydG; (GenBank) [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D V4D30_09160 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D V4D30_03150 thiE; (GenBank) thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D V4D30_09155 thiE; (GenBank) thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D V4D30_03915 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D V4D30_05915 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:taut00740]
D V4D30_06725 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D V4D30_00440 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D V4D30_05970 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D V4D30_03615 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D V4D30_02030 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D V4D30_03450 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D V4D30_01705 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:taut00750]
D V4D30_06610 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D V4D30_08425 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D V4D30_08440 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:taut00760]
D V4D30_00180 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D V4D30_05780 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D V4D30_04315 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D V4D30_06515 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D V4D30_03465 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D V4D30_06270 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D V4D30_09425 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D V4D30_08575 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D V4D30_01910 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D V4D30_04035 NAD(+)/NADH kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:taut00770]
D V4D30_00590 ilvB; (GenBank) biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D V4D30_00585 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D V4D30_01875 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D V4D30_03935 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D V4D30_07885 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D V4D30_00635 ketopantoate reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D V4D30_09500 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D V4D30_00680 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D V4D30_05680 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D V4D30_06270 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D V4D30_01540 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D V4D30_02035 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D V4D30_09760 acpS; (GenBank) holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D V4D30_02705 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D V4D30_07320 panD; (GenBank) aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:taut00780]
D V4D30_02640 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D V4D30_01340 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D V4D30_02425 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D V4D30_01330 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D V4D30_03645 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D V4D30_01505 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14]
D V4D30_00335 pyridoxal phosphate-dependent aminotransferase family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D V4D30_05530 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D V4D30_07315 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D V4D30_01405 hydE; (GenBank) [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D V4D30_01510 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D V4D30_00685 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:taut00785]
D V4D30_03660 lipoate--protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D V4D30_05475 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_03290 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:taut00790]
D V4D30_00205 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D V4D30_03250 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D V4D30_03700 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D V4D30_09785 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D V4D30_06725 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D V4D30_07650 anthranilate synthase component I family protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D V4D30_07655 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D V4D30_05800 queD; (GenBank) 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D V4D30_05040 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D V4D30_06995 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D V4D30_01715 queF; (GenBank) preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D V4D30_06015 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D V4D30_08135 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D V4D30_01460 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D V4D30_00425 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D V4D30_06485 glp; (GenBank) gephyrin-like molybdotransferase Glp K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:taut00670]
D V4D30_05620 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D V4D30_00200 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D V4D30_09945 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D V4D30_01530 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D V4D30_03780 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D V4D30_01815 thyX; (GenBank) FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D V4D30_00190 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D V4D30_00210 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D V4D30_08315 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D V4D30_08320 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_03290 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:taut00860]
D V4D30_08610 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D V4D30_04690 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D V4D30_08210 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D V4D30_01965 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D V4D30_04685 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D V4D30_01525 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D V4D30_04675 hemG; (GenBank) protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D V4D30_01710 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D V4D30_04680 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D V4D30_04735 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D V4D30_01520 radical SAM protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D V4D30_08110 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D V4D30_02600 cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D V4D30_08820 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D V4D30_01935 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D V4D30_01940 cbiB; (GenBank) adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D V4D30_01950 cobU; (GenBank) bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D V4D30_01930 cobS; (GenBank) adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D V4D30_01925 cobT; (GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D V4D30_08815 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D V4D30_01945 cobD; (GenBank) threonine-phosphate decarboxylase CobD K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D V4D30_02635 VWA domain-containing protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D V4D30_02630 AAA family ATPase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D V4D30_00670 NAD(P)/FAD-dependent oxidoreductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D V4D30_09175 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:taut00130]
D V4D30_03325 UbiA-like polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D V4D30_06360 menaquinone biosynthesis decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D V4D30_01705 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D V4D30_07860 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D V4D30_09350 menaquinone biosynthesis protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D V4D30_09385 mqnE; (GenBank) aminofutalosine synthase MqnE K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D V4D30_03835 hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D V4D30_09380 mqnC; (GenBank) cyclic dehypoxanthinyl futalosine synthase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D V4D30_05270 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
D V4D30_02355 wrbA; (GenBank) NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:taut00900]
D V4D30_06965 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D V4D30_07475 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D V4D30_05100 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D V4D30_06460 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D V4D30_09230 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D V4D30_01705 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D V4D30_06745 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D V4D30_06510 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D V4D30_06955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D V4D30_00670 NAD(P)/FAD-dependent oxidoreductase K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D V4D30_02665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03120 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_03125 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_05540 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D V4D30_05545 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:taut00523]
D V4D30_01230 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D V4D30_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D V4D30_01250 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D V4D30_01260 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:taut01055]
D V4D30_07470 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D V4D30_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:taut00946]
D V4D30_00105 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D V4D30_07780 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:taut00332]
D V4D30_05180 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D V4D30_03460 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:taut00261]
D V4D30_07470 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D V4D30_05910 sat; (GenBank) sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D V4D30_08910 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D V4D30_08310 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D V4D30_04400 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D V4D30_05350 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:taut00521]
D V4D30_03600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D V4D30_03625 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D V4D30_09910 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D V4D30_01755 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D V4D30_03155 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D V4D30_01230 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D V4D30_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D V4D30_01250 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D V4D30_01260 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D V4D30_03600 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:taut00525]
D V4D30_01230 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D V4D30_00605 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:taut00401]
D V4D30_09270 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_01825 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_09280 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D V4D30_05825 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D V4D30_05820 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D V4D30_05750 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D V4D30_01330 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D V4D30_01335 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:taut00999]
D V4D30_08315 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D V4D30_09605 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D V4D30_00105 glycoside hydrolase family 3 N-terminal domain-containing protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D V4D30_07780 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation [PATH:taut00627]
D V4D30_04745 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D V4D30_01705 flavin prenyltransferase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:taut00625]
D V4D30_01985 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:taut00633]
D V4D30_07430 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D V4D30_07435 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D V4D30_04205 porA; (GenBank) pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D V4D30_04200 thiamine pyrophosphate-dependent enzyme K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D V4D30_04215 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D V4D30_04210 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D V4D30_08560 hypothetical protein K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22]
D V4D30_08565 dsrB; (GenBank) dissimilatory-type sulfite reductase subunit beta K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:taut00626]
D V4D30_01985 zinc-dependent alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:taut03020]
D V4D30_00050 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D V4D30_00055 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D V4D30_09105 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D V4D30_05685 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:taut03010]
D V4D30_05465 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D V4D30_09225 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D V4D30_04995 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D V4D30_09005 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D V4D30_09100 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D V4D30_09060 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D V4D30_03475 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D V4D30_08955 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D V4D30_09045 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D V4D30_09520 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D V4D30_08970 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D V4D30_09095 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D V4D30_08950 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D V4D30_09090 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D V4D30_09040 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D V4D30_05865 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D V4D30_03370 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D V4D30_09020 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D V4D30_03485 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D V4D30_08995 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D V4D30_05265 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D V4D30_03200 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D V4D30_00035 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D V4D30_08990 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D V4D30_08975 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D V4D30_08980 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D V4D30_09035 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D V4D30_09050 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D V4D30_08885 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D V4D30_00040 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D V4D30_00030 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D V4D30_00045 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D V4D30_09515 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D V4D30_09025 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D V4D30_09065 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D V4D30_09010 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D V4D30_09110 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D V4D30_09055 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D V4D30_03385 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D V4D30_09120 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D V4D30_05195 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D V4D30_09000 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D V4D30_08985 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D V4D30_09030 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D V4D30_05085 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D V4D30_05190 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D V4D30_07275 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D V4D30_09015 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D V4D30_06455 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D V4D30_05575 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D V4D30_00010 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D V4D30_04380 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D V4D30_04385 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D V4D30_09085 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:taut00970]
D V4D30_02485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D V4D30_04835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D V4D30_07465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D V4D30_00140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_01720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_02280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_06730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_09115 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D V4D30_08645 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D V4D30_05335 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D V4D30_00460 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D V4D30_05095 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D V4D30_00455 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D V4D30_01675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D V4D30_03815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D V4D30_05340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D V4D30_10095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D V4D30_02490 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D V4D30_03795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_03930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_06630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_07575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_01670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D V4D30_01905 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D V4D30_03180 tRNA-Ile K14230 tRNA-Met; tRNA Met
D V4D30_05205 tRNA-Met K14230 tRNA-Met; tRNA Met
D V4D30_05925 tRNA-Met K14230 tRNA-Met; tRNA Met
D V4D30_01545 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D V4D30_00695 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D V4D30_02445 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D V4D30_05020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D V4D30_02990 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_04225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_08260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_09535 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_03805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D V4D30_10085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D V4D30_10100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D V4D30_00015 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D V4D30_10090 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D V4D30_01445 tRNA-Val K14237 tRNA-Val; tRNA Val
D V4D30_02470 tRNA-Val K14237 tRNA-Val; tRNA Val
D V4D30_08640 tRNA-Val K14237 tRNA-Val; tRNA Val
D V4D30_05605 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D V4D30_08610 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D V4D30_02720 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D V4D30_02715 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D V4D30_07325 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D V4D30_09740 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D V4D30_03745 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D V4D30_08115 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D V4D30_08120 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D V4D30_04395 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D V4D30_08030 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D V4D30_09750 selA; (GenBank) L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D V4D30_05440 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D V4D30_06395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D V4D30_08690 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D V4D30_04325 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D V4D30_02160 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D V4D30_04050 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D V4D30_02450 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D V4D30_03695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D V4D30_03020 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D V4D30_07745 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D V4D30_09125 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D V4D30_09130 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D V4D30_07890 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D V4D30_09405 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
D V4D30_05120 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:taut03060]
D V4D30_09070 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D V4D30_00020 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D V4D30_02745 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D V4D30_07870 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D V4D30_07875 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D V4D30_07865 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D V4D30_04370 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D V4D30_03230 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D V4D30_08480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D V4D30_05930 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D V4D30_04250 tatB; (GenBank) Sec-independent protein translocase protein TatB K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_07640 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_08865 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_04245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D V4D30_00955 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D V4D30_03610 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D V4D30_04045 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D V4D30_06475 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D V4D30_08460 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:taut04122]
D V4D30_04410 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D V4D30_02240 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D V4D30_09530 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D V4D30_08135 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D V4D30_08335 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D V4D30_08435 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D V4D30_05495 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D V4D30_09410 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D V4D30_01460 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D V4D30_09165 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D V4D30_05500 M67 family metallopeptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:taut03018]
D V4D30_03305 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D V4D30_05870 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D V4D30_02905 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D V4D30_03680 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D V4D30_00075 rny; (GenBank) ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D V4D30_09310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D V4D30_00390 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:taut03030]
D V4D30_07555 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D V4D30_04855 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D V4D30_02925 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D V4D30_06385 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D V4D30_03335 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D V4D30_00715 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_08040 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_08880 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D V4D30_03190 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D V4D30_03480 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D V4D30_03170 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D V4D30_03390 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D V4D30_05535 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D V4D30_08590 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D V4D30_00065 DNA-directed DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
C 03410 Base excision repair [PATH:taut03410]
D V4D30_01980 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D V4D30_04030 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D V4D30_05320 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D V4D30_05535 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D V4D30_07880 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D V4D30_08590 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:taut03420]
D V4D30_02700 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D V4D30_03065 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D V4D30_05115 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D V4D30_01960 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D V4D30_07250 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D V4D30_01170 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_07015 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_07330 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_05535 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D V4D30_08590 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:taut03430]
D V4D30_02040 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D V4D30_07915 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D V4D30_06235 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D V4D30_01170 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_07015 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_07330 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_06605 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D V4D30_06600 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D V4D30_07880 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D V4D30_03480 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D V4D30_04855 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D V4D30_00715 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_08040 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_02925 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D V4D30_03335 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D V4D30_06385 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D V4D30_07555 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D V4D30_08590 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:taut03440]
D V4D30_07880 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D V4D30_03480 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D V4D30_08840 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D V4D30_02915 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D V4D30_09725 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D V4D30_05535 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D V4D30_04010 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D V4D30_04005 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D V4D30_04015 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D V4D30_01995 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D V4D30_04855 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D V4D30_00715 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_08040 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_02925 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D V4D30_03335 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D V4D30_06385 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D V4D30_07555 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D V4D30_02025 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:taut02010]
D V4D30_06050 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D V4D30_06055 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D V4D30_06060 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D V4D30_04335 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D V4D30_04345 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D V4D30_07230 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D V4D30_08680 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D V4D30_04355 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D V4D30_07025 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D V4D30_07220 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D V4D30_04350 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D V4D30_07030 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D V4D30_07225 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D V4D30_07825 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D V4D30_07775 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D V4D30_07770 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D V4D30_07765 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D V4D30_04550 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D V4D30_04555 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D V4D30_04560 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D V4D30_04565 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D V4D30_04570 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D V4D30_03535 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D V4D30_09320 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D V4D30_09330 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D V4D30_09325 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D V4D30_08515 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D V4D30_08520 cbiM; (GenBank) cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D V4D30_08500 cbiQ; (GenBank) cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D V4D30_08525 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D V4D30_08505 hypothetical protein K16915 cbiL; nickel transport protein
D V4D30_08510 hypothetical protein K16915 cbiL; nickel transport protein
D V4D30_02455 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D V4D30_02465 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D V4D30_06315 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D V4D30_06320 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D V4D30_06935 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D V4D30_05555 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D V4D30_05550 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D V4D30_08145 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:taut03070]
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
D V4D30_07870 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D V4D30_07875 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D V4D30_00020 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D V4D30_02745 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D V4D30_09070 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D V4D30_07865 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D V4D30_04370 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D V4D30_03230 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D V4D30_05930 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D V4D30_08480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D V4D30_04250 tatB; (GenBank) Sec-independent protein translocase protein TatB K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_07640 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_08865 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_04245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D V4D30_06705
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:taut02020]
D V4D30_07440 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D V4D30_02255 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D V4D30_07825 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D V4D30_06680 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D V4D30_04105 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D V4D30_04100 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D V4D30_05150 flagellin K02406 fliC; flagellin
D V4D30_06180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D V4D30_01475 flagellar motor protein K02556 motA; chemotaxis protein MotA
D V4D30_01490 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D V4D30_08045 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D V4D30_04545 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D V4D30_05375 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D V4D30_05380 LytTR family DNA-binding domain-containing protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D V4D30_04530 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00247 frdD; succinate dehydrogenase subunit D
D V4D30_06080 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D V4D30_08180 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D V4D30_08400 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D V4D30_09995 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D V4D30_10000 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D V4D30_08185 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D V4D30_06545 ATP-binding protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D V4D30_02045 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D V4D30_09695 hypothetical protein K07803 zraP; zinc resistance-associated protein
D V4D30_06930 rpoN; (GenBank) RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D V4D30_09565 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D V4D30_07435 hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D V4D30_07430 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D V4D30_00515 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D V4D30_06170 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D V4D30_00250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00535 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02075 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02305 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_03215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_04230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_05600 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_05635 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_09710 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_00505 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_06155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_00495 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_00510 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_03845 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06165 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_00525 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_06145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_05625 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D V4D30_05630 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D V4D30_05640 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D V4D30_00095 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D V4D30_06790 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D V4D30_07125 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D V4D30_02185 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D V4D30_02180 cydB; (GenBank) cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
D V4D30_06100 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D V4D30_03470
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
D V4D30_02350 Fe-Mn family superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D V4D30_09290 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:taut02024]
D V4D30_05825 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D V4D30_05820 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D V4D30_04550 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D V4D30_04555 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D V4D30_04560 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D V4D30_04565 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D V4D30_04570 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D V4D30_06790 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D V4D30_07125 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D V4D30_00440 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D V4D30_04950 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D V4D30_02740 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D V4D30_04070 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D V4D30_04065 opp4C; (GenBank) oligopeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D V4D30_09210 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D V4D30_04370 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D V4D30_00020 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D V4D30_02745 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D V4D30_09070 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D V4D30_07865 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D V4D30_03230 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D V4D30_05930 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D V4D30_08480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:taut02030]
D V4D30_00250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00535 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02075 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02305 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_03215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_04230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_05600 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00505 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_06155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_00530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_05635 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_09710 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_00495 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_00510 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_03845 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06165 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06150 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D V4D30_00525 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_06145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_00515 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D V4D30_06170 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D V4D30_07080 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D V4D30_06225 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D V4D30_06220 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D V4D30_01475 flagellar motor protein K02556 motA; chemotaxis protein MotA
D V4D30_01490 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D V4D30_01480 OmpA family protein K02557 motB; chemotaxis protein MotB
D V4D30_01495 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:taut02040]
D V4D30_07070 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D V4D30_07075 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D V4D30_07080 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D V4D30_07085 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D V4D30_07090 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D V4D30_07095 hypothetical protein K02413 fliJ; flagellar protein FliJ
D V4D30_07105 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D V4D30_06230 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D V4D30_06225 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D V4D30_06220 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D V4D30_06215 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D V4D30_06210 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D V4D30_06205 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D V4D30_06195 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D V4D30_06200 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D V4D30_06120 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D V4D30_07060 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D V4D30_07065 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D V4D30_07110 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D V4D30_07115 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D V4D30_06130 flgF; (GenBank) flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D V4D30_06125 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D V4D30_06115 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D V4D30_06110 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D V4D30_06090 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D V4D30_06085 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D V4D30_05150 flagellin K02406 fliC; flagellin
D V4D30_05160 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D V4D30_05165 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D V4D30_01475 flagellar motor protein K02556 motA; chemotaxis protein MotA
D V4D30_01490 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D V4D30_01480 OmpA family protein K02557 motB; chemotaxis protein MotB
D V4D30_01495 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D V4D30_06100 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D V4D30_02660 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D V4D30_03185 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D V4D30_06930 rpoN; (GenBank) RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D V4D30_06180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells [PATH:taut04820]
D V4D30_00120 cation-transporting P-type ATPase K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13]
D V4D30_03305 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:taut04981]
D V4D30_00210 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D V4D30_09945 glyA; (GenBank) serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D V4D30_07805 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:taut01501]
D V4D30_00110 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D V4D30_04960 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D V4D30_04955 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D V4D30_04950 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
D V4D30_00630 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D V4D30_05960 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D V4D30_04495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:taut01502]
D V4D30_04445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D V4D30_08860 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D V4D30_04485 murF; (GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D V4D30_04480 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D V4D30_04460 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:taut01503]
D V4D30_05140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D V4D30_06680 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D V4D30_04960 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D V4D30_04955 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
D V4D30_03650 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:taut01000]
C 01001 Protein kinases [BR:taut01001]
D V4D30_08705 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D V4D30_07440 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D V4D30_05375 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D V4D30_09995 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D V4D30_06545 ATP-binding protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D V4D30_04620 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D V4D30_00505 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_06155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_05630 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
C 01009 Protein phosphatases and associated proteins [BR:taut01009]
D V4D30_08320 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
C 01002 Peptidases and inhibitors [BR:taut01002]
D V4D30_04045 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D V4D30_05280 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D V4D30_07425 HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D V4D30_10065 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D V4D30_02400 hydrogenase 3 maturation endopeptidase HyCI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D V4D30_06740 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D V4D30_05130 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D V4D30_00430 LysM peptidoglycan-binding domain-containing protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D V4D30_02110 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D V4D30_08390 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D V4D30_07335 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D V4D30_01280 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D V4D30_07020 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D V4D30_00450 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D V4D30_06575 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D V4D30_06580 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D V4D30_09075 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D V4D30_03705 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D V4D30_01410 htpX; (GenBank) zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D V4D30_06970 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D V4D30_06680 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D V4D30_07485 DegQ family serine endoprotease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D V4D30_04475 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D V4D30_06820 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D V4D30_03920 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D V4D30_04600 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D V4D30_00955 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D V4D30_03610 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D V4D30_05565 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D V4D30_09220 sppA; (GenBank) signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D V4D30_08410 rhomboid family intramembrane serine protease K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D V4D30_09900 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D V4D30_05795 TldD/PmbA family protein K03592 pmbA; PmbA protein
D V4D30_04055 TldD/PmbA family protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:taut01003]
D V4D30_05720 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D V4D30_07805 ceramide glucosyltransferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D V4D30_06560 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D V4D30_08365 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_00630 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D V4D30_04465 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05965 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_07615 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:taut01005]
D V4D30_03650 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D V4D30_04720 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D V4D30_04060 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D V4D30_03640 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D V4D30_03655 lpxI; (GenBank) UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D V4D30_08810 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D V4D30_08150 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D V4D30_04715 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D V4D30_05520 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D V4D30_08060 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D V4D30_06310 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D V4D30_07750 rfaE1; (GenBank) D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D V4D30_03550 waaC; (GenBank) lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D V4D30_03545 waaF; (GenBank) lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D V4D30_09650 glycosyltransferase family 4 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D V4D30_09630 glycosyltransferase K03280 waaK; UDP-N-acetylglucosamine:(glucosyl)LPS alpha-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.56]
D V4D30_09645 rfaQ; (GenBank) putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D V4D30_04020 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D V4D30_06765 rfaD; (GenBank) ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:taut01011]
D V4D30_03285 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D V4D30_04450 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D V4D30_04455 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D V4D30_04470 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D V4D30_04490 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D V4D30_04445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D V4D30_08860 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D V4D30_09965 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D V4D30_04480 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D V4D30_04460 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D V4D30_05455 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D V4D30_02690 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D V4D30_00630 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D V4D30_05960 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D V4D30_04495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D V4D30_04475 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D V4D30_08365 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_04465 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05965 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_00450 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D V4D30_00430 LysM peptidoglycan-binding domain-containing protein K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D V4D30_03715 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D V4D30_02275 transglycosylase SLT domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D V4D30_06465 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D V4D30_09890 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D V4D30_03990 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D V4D30_05140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:taut01004]
D V4D30_05750 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D V4D30_05585 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D V4D30_01340 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D V4D30_02425 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D V4D30_01330 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D V4D30_03645 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D V4D30_00265 acyl--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_07570 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D V4D30_00640 acetate--CoA ligase family protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D V4D30_05580 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D V4D30_06990 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D V4D30_07000 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:taut01008]
D V4D30_07470 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:taut01006]
D V4D30_06745 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D V4D30_06510 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D V4D30_06955 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D V4D30_01470 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D V4D30_03325 UbiA-like polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:taut01007]
D V4D30_08610 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D V4D30_07890 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D V4D30_09405 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D V4D30_05440 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D V4D30_03695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D V4D30_06395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D V4D30_04050 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D V4D30_04325 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D V4D30_02160 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D V4D30_02450 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D V4D30_03745 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D V4D30_07745 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D V4D30_08115 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D V4D30_08120 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D V4D30_08030 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D V4D30_03020 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D V4D30_04395 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D V4D30_09740 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D V4D30_09125 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D V4D30_09130 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D V4D30_08855 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D V4D30_05485 alaC; (GenBank) alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D V4D30_07965 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D V4D30_01825 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_09280 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D V4D30_04515 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D V4D30_00335 pyridoxal phosphate-dependent aminotransferase family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D V4D30_00215 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D V4D30_05530 bioA; (GenBank) adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D V4D30_08210 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D V4D30_02705 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:taut00194]
D V4D30_02200 cytochrome b N-terminal domain-containing protein K02635 petB; cytochrome b6
D V4D30_06885 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D V4D30_06890 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D V4D30_06895 atpG; (GenBank) ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D V4D30_06900 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D V4D30_06905 atpH; (GenBank) ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D V4D30_06910 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D V4D30_06915 atpF; (GenBank) F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D V4D30_05055 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D V4D30_05050 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D V4D30_06775 HEAT repeat domain-containing protein K05386 cpeZ; bilin biosynthesis protein
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:taut03000]
D V4D30_08450 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D V4D30_08360 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D V4D30_09170 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D V4D30_06790 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D V4D30_07125 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D V4D30_06760 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D V4D30_01805 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D V4D30_00685 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D V4D30_09670 NrpR regulatory domain-containing protein K09720 nrpRI; HTH-type transcriptional regulator, global nitrogen regulator NrpRI
D V4D30_08185 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein
D V4D30_06045 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D V4D30_00165 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D V4D30_05515 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D V4D30_09300 hrcA; (GenBank) heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D V4D30_03520 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D V4D30_04975 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D V4D30_04510 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:taut03021]
D V4D30_09105 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D V4D30_00050 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D V4D30_00055 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D V4D30_05685 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D V4D30_02660 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D V4D30_03185 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D V4D30_06930 rpoN; (GenBank) RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D V4D30_06180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D V4D30_02000 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D V4D30_05975 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D V4D30_00025 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D V4D30_03520 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D V4D30_04975 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D V4D30_09870 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D V4D30_03680 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:taut03019]
D V4D30_05120 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
D V4D30_06660 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D V4D30_00075 rny; (GenBank) ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D V4D30_02905 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D V4D30_03305 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D V4D30_05870 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D V4D30_03680 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho
D V4D30_09310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D V4D30_00390 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D V4D30_06080 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D V4D30_06920 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:taut03011]
D V4D30_09225 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D V4D30_04995 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D V4D30_09005 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D V4D30_09100 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D V4D30_09060 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D V4D30_03475 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D V4D30_08955 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D V4D30_09045 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D V4D30_09520 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D V4D30_08970 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D V4D30_09095 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D V4D30_08950 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D V4D30_09090 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D V4D30_09040 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D V4D30_05865 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D V4D30_03370 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D V4D30_09020 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D V4D30_03485 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D V4D30_08995 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D V4D30_05265 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D V4D30_03200 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D V4D30_00035 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D V4D30_08990 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D V4D30_08975 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D V4D30_08980 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D V4D30_09035 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D V4D30_09050 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D V4D30_08885 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D V4D30_00040 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D V4D30_00030 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D V4D30_00045 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D V4D30_09515 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D V4D30_09025 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D V4D30_09065 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D V4D30_09010 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D V4D30_09110 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D V4D30_09055 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D V4D30_03385 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D V4D30_09120 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D V4D30_05195 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D V4D30_09000 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D V4D30_08985 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D V4D30_09030 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D V4D30_05190 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D V4D30_07275 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D V4D30_09015 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D V4D30_06455 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D V4D30_05575 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D V4D30_00010 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D V4D30_04380 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D V4D30_04385 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D V4D30_09085 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D V4D30_05085 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D V4D30_05465 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:taut03009]
D V4D30_08850 era; (GenBank) GTPase Era K03595 era; GTPase
D V4D30_05185 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D V4D30_03520 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D V4D30_04975 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D V4D30_02000 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D V4D30_05975 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D V4D30_00025 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D V4D30_09690 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D V4D30_08700 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D V4D30_01535 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D V4D30_00655 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D V4D30_00285 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D V4D30_04505 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D V4D30_09455 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D V4D30_06750 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D V4D30_05445 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D V4D30_08595 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D V4D30_02755 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D V4D30_07950 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D V4D30_09880 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D V4D30_09835 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D V4D30_03070 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D V4D30_00275 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D V4D30_03910 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D V4D30_06660 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D V4D30_10005 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase
D V4D30_00470 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase
D V4D30_03275 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D V4D30_03280 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D V4D30_07265 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D V4D30_02005 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D V4D30_00660 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein
D V4D30_03965 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D V4D30_06925 raiA; (GenBank) ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D V4D30_04235 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D V4D30_05570 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:taut03016]
D V4D30_06550 hypothetical protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D V4D30_09485 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D V4D30_09665 CBS domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D V4D30_09360 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D V4D30_09365 archease K24956 ZBTB8OS; protein archease
D V4D30_08610 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D V4D30_03020 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D V4D30_04050 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D V4D30_02160 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D V4D30_06395 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D V4D30_03695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D V4D30_02450 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D V4D30_03745 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D V4D30_09740 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D V4D30_04395 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D V4D30_08030 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D V4D30_05440 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D V4D30_04325 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D V4D30_07745 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D V4D30_09125 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D V4D30_09130 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D V4D30_07890 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D V4D30_09405 trpS; (GenBank) tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D V4D30_09490 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D V4D30_03445 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D V4D30_03820 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D V4D30_03850 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D V4D30_04970 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D V4D30_09795 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D V4D30_09840 truD; (GenBank) tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D V4D30_04410 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D V4D30_03275 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D V4D30_01470 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D V4D30_04365 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D V4D30_00290 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D V4D30_06470 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D V4D30_04845 RNA ligase partner protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D V4D30_09960 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D V4D30_09720 thpR; (GenBank) RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D V4D30_08115 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D V4D30_08120 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D V4D30_09940 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D V4D30_03010 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D V4D30_03015 mtaB; (GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D V4D30_06595 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D V4D30_03380 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D V4D30_08900 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D V4D30_09530 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D V4D30_03165 ATP-binding protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D V4D30_02240 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D V4D30_03985 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D V4D30_06995 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D V4D30_05800 queD; (GenBank) 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D V4D30_05040 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D V4D30_01715 queF; (GenBank) preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D V4D30_04000 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D V4D30_08240 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D V4D30_04270 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D V4D30_00280 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D V4D30_02950 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D V4D30_04040 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D V4D30_02905 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D V4D30_05870 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:taut03012]
D V4D30_07270 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D V4D30_04390 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D V4D30_04990 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D V4D30_00005 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D V4D30_08965 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D V4D30_08960 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D V4D30_09810 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D V4D30_07490 selB; (GenBank) selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D V4D30_05120 hypothetical protein K03265 ETF1; peptide chain release factor subunit 1
D V4D30_06445 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D V4D30_04980 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor
D V4D30_06440 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D V4D30_05080 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D V4D30_09080 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D V4D30_05670 efp; (GenBank) elongation factor P K02356 efp; elongation factor P
D V4D30_08050 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:taut03110]
D V4D30_08930 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D V4D30_08455 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D V4D30_06840 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D V4D30_06815 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D V4D30_09895 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D V4D30_09310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D V4D30_00390 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D V4D30_08445 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D V4D30_09315 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D V4D30_09850 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D V4D30_09305 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D V4D30_06475 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D V4D30_08460 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D V4D30_00395 co-chaperone GroES K04078 groES; chaperonin GroES
D V4D30_07940 co-chaperone GroES family protein K04078 groES; chaperonin GroES
D V4D30_06680 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D V4D30_03705 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D V4D30_05050 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D V4D30_09695 hypothetical protein K07803 zraP; zinc resistance-associated protein
D V4D30_09930 hypA; (GenBank) hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D V4D30_09935 hypB; (GenBank) hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D V4D30_04360 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D V4D30_08465 trxA; (GenBank) thioredoxin K03671 TXN; thioredoxin
D V4D30_00945 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D V4D30_04265 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
C 04131 Membrane trafficking [BR:taut04131]
D V4D30_05740 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D V4D30_02120 glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_03115 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_06855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_00175 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_03090 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:taut03032]
D V4D30_03170 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D V4D30_01125 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D V4D30_05850 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D V4D30_02435 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D V4D30_09215 HU family DNA-binding protein K05788 ihfB; integration host factor subunit beta
D V4D30_08045 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D V4D30_08880 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D V4D30_03190 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D V4D30_03480 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D V4D30_04855 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D V4D30_00715 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_08040 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_03335 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D V4D30_06385 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D V4D30_07555 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D V4D30_02925 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D V4D30_03390 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D V4D30_05535 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D V4D30_08590 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D V4D30_00065 DNA-directed DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D V4D30_07530 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D V4D30_08035 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D V4D30_02405 rgy; (GenBank) reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:taut03036]
D V4D30_01125 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D V4D30_05850 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D V4D30_02435 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D V4D30_09215 HU family DNA-binding protein K05788 ihfB; integration host factor subunit beta
D V4D30_08045 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D V4D30_08550 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D V4D30_06490 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D V4D30_00435 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D V4D30_04435 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D V4D30_03310 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D V4D30_05550 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D V4D30_04495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D V4D30_05460 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D V4D30_04440 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D V4D30_04465 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05555 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D V4D30_04430 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D V4D30_03725 cell division protein ZapA K09888 zapA; cell division protein ZapA
D V4D30_03720 zapB; (GenBank) cell division protein ZapB K09892 zapB; cell division protein ZapB
D V4D30_05140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D V4D30_04960 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D V4D30_07740 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D V4D30_05945 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D V4D30_05950 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D V4D30_05965 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05510 AAA family ATPase K03496 parA; chromosome partitioning protein
D V4D30_07255 ParA family protein K03496 parA; chromosome partitioning protein
D V4D30_05515 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D V4D30_00290 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D V4D30_00285 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D V4D30_09905 xerC; (GenBank) tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D V4D30_07675 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
C 03400 DNA repair and recombination proteins [BR:taut03400]
D V4D30_01900 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D V4D30_01980 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D V4D30_06975 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D V4D30_04030 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D V4D30_05320 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D V4D30_07880 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D V4D30_08590 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D V4D30_05535 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D V4D30_03065 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D V4D30_05115 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D V4D30_01960 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D V4D30_07250 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D V4D30_01170 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_07015 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_07330 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D V4D30_00050 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D V4D30_00055 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D V4D30_09105 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D V4D30_05685 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D V4D30_02700 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D V4D30_02040 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D V4D30_07915 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D V4D30_06235 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D V4D30_06605 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D V4D30_06600 xseB; (GenBank) exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D V4D30_04855 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D V4D30_00715 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_08040 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D V4D30_03335 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D V4D30_06385 DNA polymerase III subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D V4D30_07555 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D V4D30_02925 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D V4D30_03480 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D V4D30_09725 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA
D V4D30_04010 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D V4D30_04005 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D V4D30_04015 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D V4D30_02025 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D V4D30_09680 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D V4D30_01995 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D V4D30_08840 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D V4D30_02915 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR
D V4D30_04405 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D V4D30_04795 cas1b; (GenBank) type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D V4D30_08740 cas1; (GenBank) CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D V4D30_07530 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D V4D30_08035 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D V4D30_01125 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D V4D30_05850 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D V4D30_02435 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D V4D30_09215 HU family DNA-binding protein K05788 ihfB; integration host factor subunit beta
D V4D30_09730 regulatory protein RecX K03565 recX; regulatory protein
D V4D30_05360 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D V4D30_07935 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D V4D30_07260 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:taut03029]
D V4D30_07270 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D V4D30_04390 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D V4D30_04990 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts
D V4D30_00005 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D V4D30_08965 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D V4D30_08960 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D V4D30_09810 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G
D V4D30_08850 era; (GenBank) GTPase Era K03595 era; GTPase
D V4D30_07890 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D V4D30_02160 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D V4D30_03745 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D V4D30_03695 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D V4D30_02720 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D V4D30_02715 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D V4D30_07325 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D V4D30_03480 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D V4D30_03050 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D V4D30_03630 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D V4D30_09310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D V4D30_09305 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D V4D30_00390 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D V4D30_00395 co-chaperone GroES K04078 groES; chaperonin GroES
D V4D30_07940 co-chaperone GroES family protein K04078 groES; chaperonin GroES
D V4D30_08445 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D V4D30_09315 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D V4D30_04410 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D V4D30_04370 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:taut02000]
D V4D30_08145 ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D V4D30_06050 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein
D V4D30_06055 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D V4D30_06060 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D V4D30_08380 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D V4D30_08375 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D V4D30_04345 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D V4D30_07230 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D V4D30_08680 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D V4D30_04355 MlaE family lipid ABC transporter permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D V4D30_07025 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D V4D30_07220 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D V4D30_04350 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D V4D30_07030 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D V4D30_07225 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D V4D30_04335 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D V4D30_07825 pstS; (GenBank) phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D V4D30_07775 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D V4D30_07770 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D V4D30_07765 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D V4D30_04550 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D V4D30_04555 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D V4D30_04560 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D V4D30_04565 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D V4D30_04570 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D V4D30_08195 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D V4D30_03535 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D V4D30_02740 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D V4D30_04070 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D V4D30_04065 opp4C; (GenBank) oligopeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D V4D30_09210 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D V4D30_02555 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D V4D30_02585 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D V4D30_02560 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D V4D30_02590 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D V4D30_02565 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D V4D30_02595 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D V4D30_01955 helical backbone metal receptor K25034 btuF; cobalamin transport system substrate-binding protein
D V4D30_09320 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D V4D30_09330 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D V4D30_09325 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D V4D30_08500 cbiQ; (GenBank) cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D V4D30_08515 energy-coupling factor ABC transporter permease K02007 cbiM; cobalt/nickel transport system permease protein
D V4D30_08520 cbiM; (GenBank) cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D V4D30_08525 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D V4D30_08505 hypothetical protein K16915 cbiL; nickel transport protein
D V4D30_08510 hypothetical protein K16915 cbiL; nickel transport protein
D V4D30_06315 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D V4D30_06320 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D V4D30_06935 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D V4D30_04940 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein
D V4D30_04935 ATP-binding cassette domain-containing protein K25182 ybhF; drug efflux transport system ATP-binding protein
D V4D30_04930 efflux RND transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG
D V4D30_02455 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D V4D30_02465 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D V4D30_05555 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D V4D30_05550 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D V4D30_04945 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D V4D30_05365 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D V4D30_08265 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D V4D30_08270 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D V4D30_09200 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D V4D30_00110 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D V4D30_01450 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D V4D30_06415 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D V4D30_04710 potassium channel protein K10716 kch; voltage-gated potassium channel
D V4D30_08175 ammonium transporter K03320 amt; ammonium transporter, Amt family
D V4D30_01475 flagellar motor protein K02556 motA; chemotaxis protein MotA
D V4D30_01490 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D V4D30_01480 OmpA family protein K02557 motB; chemotaxis protein MotB
D V4D30_01495 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D V4D30_02530 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D V4D30_02525 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR
D V4D30_00570 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D V4D30_01915 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D V4D30_02580 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
D V4D30_04950 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D V4D30_03050 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D V4D30_03630 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D V4D30_04740 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D V4D30_09735 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D V4D30_06940 LptA/OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D V4D30_09790 LptA/OstA family protein K04744 lptD; LPS-assembly protein
D V4D30_01750 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D V4D30_03525 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D V4D30_04955 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D V4D30_04100 efflux RND transporter permease subunit K07788 mdtB; multidrug efflux pump
D V4D30_00225 lactate permease LctP family transporter K03303 lutP; lactate permease
D V4D30_09675 L-lactate permease K03303 lutP; lactate permease
D V4D30_07930 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D V4D30_07565 actP; (GenBank) cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D V4D30_03005 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D V4D30_07620 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D V4D30_08355 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D V4D30_08350 chrA; (GenBank) chromate efflux transporter K07240 chrA; chromate transporter
D V4D30_07985 bile acid:sodium symporter K03325 ACR3; arsenite transporter
D V4D30_02860 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D V4D30_02875 Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D V4D30_02690 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D V4D30_04670 AEC family transporter K24180 mleP; malate permease and related proteins
D V4D30_07695 KUP/HAK/KT family potassium transporter K03549 kup; KUP system potassium uptake protein
D V4D30_08825 MarC family protein K05595 marC; multiple antibiotic resistance protein
D V4D30_04465 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D V4D30_05385 carbon starvation protein A K06200 cstA; carbon starvation protein
D V4D30_05010 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D V4D30_02520 TonB C-terminal domain-containing protein K03832 tonB; periplasmic protein TonB
D V4D30_07970 energy transducer TonB K03832 tonB; periplasmic protein TonB
D V4D30_08125 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D V4D30_02515 hypothetical protein K03641 tolB; TolB protein
D V4D30_02145 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D V4D30_02210 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D V4D30_02810 molybdopterin-dependent oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D V4D30_08285 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D V4D30_04960 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D V4D30_04105 efflux RND transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D V4D30_00480 FeoA domain-containing protein K04758 feoA; ferrous iron transport protein A
D V4D30_01430 FeoA family protein K04758 feoA; ferrous iron transport protein A
D V4D30_01435 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D V4D30_00475 feoB; (GenBank) ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D V4D30_01440 feoB; (GenBank) ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D V4D30_07645 DUF202 domain-containing protein K00389 yidH; inner membrane protein YidH
C 02044 Secretion system [BR:taut02044]
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
D V4D30_05280 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D V4D30_09565 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D V4D30_00185 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D V4D30_06700 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D V4D30_08615 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D V4D30_04520 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D V4D30_06695 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D V4D30_05640 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D V4D30_05625 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D V4D30_09600 pilM; (GenBank) pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D V4D30_09595 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D V4D30_09590 pilO; (GenBank) type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D V4D30_09585 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D V4D30_09580 pilQ; (GenBank) type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D V4D30_06250 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D V4D30_06255 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D V4D30_00360 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D V4D30_07735 YggT family protein K02221 yggT; YggT family protein
D V4D30_07500 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D V4D30_06195 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D V4D30_06200 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D V4D30_08020 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D V4D30_07075 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D V4D30_07085 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D V4D30_07090 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D V4D30_06220 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D V4D30_06215 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D V4D30_06210 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D V4D30_06205 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D V4D30_01045 conjugal transfer protein TraG N-terminal domain-containing protein K12056 traG; conjugal transfer mating pair stabilization protein TraG
D V4D30_00970 traN; (GenBank) conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D V4D30_00990 type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D V4D30_00985 TraU family protein K12060 traU; conjugal transfer pilus assembly protein TraU
D V4D30_00980 hypothetical protein K12061 traW; conjugal transfer pilus assembly protein TraW
D V4D30_00965 TraC family protein K12063 traC; conjugal transfer ATP-binding protein TraC
D V4D30_01030 TraV family lipoprotein K12064 traV; conjugal transfer pilus assembly protein TraV
D V4D30_01020 TraB/VirB10 family protein K12065 traB; conjugal transfer pilus assembly protein TraB
D V4D30_01015 type-F conjugative transfer system secretin TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D V4D30_01010 TraE/TraK family type IV conjugative transfer system protein K12067 traE; conjugal transfer pilus assembly protein TraE
D V4D30_00835 TraM recognition domain-containing protein K12071 traD; conjugal transfer pilus assembly protein TraD
D V4D30_00945 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D V4D30_04265 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D V4D30_01040 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D V4D30_03230 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D V4D30_07870 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D V4D30_00020 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D V4D30_07875 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D V4D30_02745 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D V4D30_09070 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D V4D30_08480 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D V4D30_05930 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D V4D30_07865 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D V4D30_04370 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D V4D30_04250 tatB; (GenBank) Sec-independent protein translocase protein TatB K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_07640 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_08865 twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D V4D30_04245 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:taut02042]
D V4D30_00570 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:taut02022]
D V4D30_07440 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D V4D30_02255 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D V4D30_05375 sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D V4D30_05380 LytTR family DNA-binding domain-containing protein K07705 lytT; two-component system, LytTR family, response regulator LytT
D V4D30_09995 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D V4D30_10000 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D V4D30_06545 ATP-binding protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D V4D30_02045 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D V4D30_04620 ATP-binding protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D V4D30_00505 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_06155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_00495 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_00510 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_03845 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06165 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_00525 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_06145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_05630 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D V4D30_05640 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D V4D30_00095 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
C 02035 Bacterial motility proteins [BR:taut02035]
D V4D30_00505 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_06155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D V4D30_00530 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_05635 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_09710 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D V4D30_00515 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D V4D30_06170 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D V4D30_00525 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_06145 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D V4D30_00495 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_00510 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_03845 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06160 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06165 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D V4D30_06150 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D V4D30_00250 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00490 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_00535 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02075 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02305 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_02890 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_03215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_04230 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_05600 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D V4D30_07085 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D V4D30_07090 FliI/YscN family ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D V4D30_07095 hypothetical protein K02413 fliJ; flagellar protein FliJ
D V4D30_06215 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D V4D30_06210 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D V4D30_06205 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D V4D30_06195 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D V4D30_06200 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D V4D30_07080 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D V4D30_06225 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D V4D30_06220 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D V4D30_07075 fliF; (GenBank) flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D V4D30_06110 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D V4D30_06120 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D V4D30_06115 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D V4D30_06230 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D V4D30_07070 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D V4D30_07105 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D V4D30_07060 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D V4D30_07065 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D V4D30_07110 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D V4D30_06130 flgF; (GenBank) flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D V4D30_06125 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D V4D30_07115 flgE; (GenBank) flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D V4D30_06090 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D V4D30_06085 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D V4D30_05150 flagellin K02406 fliC; flagellin
D V4D30_05160 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D V4D30_05165 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D V4D30_06180 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D V4D30_01475 flagellar motor protein K02556 motA; chemotaxis protein MotA
D V4D30_01490 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D V4D30_01480 OmpA family protein K02557 motB; chemotaxis protein MotB
D V4D30_01495 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D V4D30_06075 fliW; (GenBank) flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D V4D30_06100 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D V4D30_05155 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D V4D30_06190 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF
D V4D30_06185 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D V4D30_05640 response regulator K02658 pilH; twitching motility two-component system response regulator PilH
D V4D30_05625 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D V4D30_05630 response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D V4D30_06250 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D V4D30_06255 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D V4D30_09565 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D V4D30_00185 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D V4D30_06700 ATPase, T2SS/T4P/T4SS family K02652 pilB; type IV pilus assembly protein PilB
D V4D30_08615 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D V4D30_04520 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D V4D30_06695 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D V4D30_05280 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D V4D30_09580 pilQ; (GenBank) type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D V4D30_09585 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D V4D30_09590 pilO; (GenBank) type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D V4D30_09595 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D V4D30_09600 pilM; (GenBank) pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D V4D30_00360 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:taut04812]
D V4D30_08875 amrB; (GenBank) AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D V4D30_05945 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D V4D30_01085 ParM/StbA family protein K18640 parM; plasmid segregation protein ParM
D V4D30_04430 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D V4D30_04435 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA
D V4D30_05510 AAA family ATPase K03496 parA; chromosome partitioning protein
D V4D30_07255 ParA family protein K03496 parA; chromosome partitioning protein
D V4D30_05515 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:taut04147]
D V4D30_03305 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D V4D30_02120 glyceraldehyde 3-phosphate dehydrogenase NAD-binding domain-containing protein K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_03115 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_06855 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D V4D30_03110 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D V4D30_06860 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D V4D30_00175 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_03090 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D V4D30_09140 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D V4D30_00390 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D V4D30_09310 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D V4D30_08235 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D V4D30_06735 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D V4D30_00005 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D V4D30_08965 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu
D V4D30_00120 cation-transporting P-type ATPase K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13]
D V4D30_03445 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D V4D30_08320 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D V4D30_05915 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D V4D30_09815 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D V4D30_02945 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D V4D30_03095 fbp; (GenBank) class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D V4D30_07625 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D V4D30_08400 glnA; (GenBank) type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D V4D30_01965 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D V4D30_03590 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D V4D30_03780 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D V4D30_03295 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D V4D30_02750 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:taut02048]
D V4D30_04795 cas1b; (GenBank) type I-B CRISPR-associated endonuclease Cas1b K15342 cas1; CRISP-associated protein Cas1
D V4D30_08740 cas1; (GenBank) CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D V4D30_01760 cas2; (GenBank) CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D V4D30_04800 cas2; (GenBank) CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D V4D30_08730 cas2; (GenBank) CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D V4D30_08745 cas2; (GenBank) CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D V4D30_04785 cas3; (GenBank) CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D V4D30_04790 cas4; (GenBank) CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D V4D30_04765 cas6; (GenBank) CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D V4D30_04770 TIGR02556 family CRISPR-associated protein K19114 csh1; CRISPR-associated protein Csh1
D V4D30_04775 cas7b; (GenBank) type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D V4D30_04780 cas5b; (GenBank) type I-B CRISPR-associated protein Cas5b K19116 cas5h; CRISPR-associated protein Cas5h
D V4D30_01785 RAMP superfamily CRISPR-associated protein K19134 csx10; CRISPR-associated protein Csx10
D V4D30_08775 cas10; (GenBank) type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1
D V4D30_08765 csm3; (GenBank) type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3
D V4D30_08760 RAMP superfamily CRISPR-associated protein K19139 csm4; CRISPR-associated protein Csm4
D V4D30_01590 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D V4D30_01595 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D V4D30_04430 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D V4D30_05945 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D V4D30_08610 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D V4D30_02575 DUF86 domain-containing protein K28186 hepT; HepT family RNase toxin
D V4D30_02570 nucleotidyltransferase domain-containing protein K28187 mntA; MntA family adenylyltransferase antitoxin
D V4D30_04410 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:taut01504]
D V4D30_04960 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D V4D30_04955 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D V4D30_04950 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D V4D30_04340 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08280 TolC family protein K12340 tolC; outer membrane protein
D V4D30_08290 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:taut03100]
D V4D30_02485 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D V4D30_04835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D V4D30_07465 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D V4D30_00140 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_01720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_02280 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_06730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D V4D30_09115 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D V4D30_08645 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D V4D30_05335 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D V4D30_00460 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D V4D30_05095 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D V4D30_00455 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D V4D30_01675 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D V4D30_03815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D V4D30_05340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D V4D30_10095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D V4D30_02490 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D V4D30_03795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_03930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_06630 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_07575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D V4D30_01670 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D V4D30_01905 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D V4D30_03180 tRNA-Ile K14230 tRNA-Met; tRNA Met
D V4D30_05205 tRNA-Met K14230 tRNA-Met; tRNA Met
D V4D30_05925 tRNA-Met K14230 tRNA-Met; tRNA Met
D V4D30_01545 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D V4D30_00695 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D V4D30_02445 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D V4D30_05020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D V4D30_02990 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_04225 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_08260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_09535 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D V4D30_03805 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D V4D30_10085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D V4D30_10100 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D V4D30_00015 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D V4D30_10090 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D V4D30_01445 tRNA-Val K14237 tRNA-Val; tRNA Val
D V4D30_02470 tRNA-Val K14237 tRNA-Val; tRNA Val
D V4D30_08640 tRNA-Val K14237 tRNA-Val; tRNA Val
D V4D30_05605 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D V4D30_05465 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D V4D30_02090 ssrA; (GenBank) transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D V4D30_02730 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D V4D30_03430 thiamine pyrophosphate-dependent enzyme K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D V4D30_08010 thiamine pyrophosphate-dependent enzyme K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D V4D30_03345 indolepyruvate oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D V4D30_08005 2-oxoacid:acceptor oxidoreductase family protein K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D V4D30_01355 NADH-dependent [FeFe] hydrogenase, group A6 K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D V4D30_01360 [Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein K00533 E1.12.7.2L; ferredoxin hydrogenase large subunit [EC:1.12.7.2]
D V4D30_01365 iron hydrogenase small subunit K00534 E1.12.7.2S; ferredoxin hydrogenase small subunit [EC:1.12.7.2]
D V4D30_02395 NADH-quinone oxidoreductase subunit B family protein K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D V4D30_04090 amrS; (GenBank) AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D V4D30_08405 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D V4D30_06500 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D V4D30_02375 proton-conducting transporter membrane subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D V4D30_02370 hydrogenase 4 subunit D K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D V4D30_02385 hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D V4D30_02390 proton-conducting transporter membrane subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D V4D30_06530 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D V4D30_08055 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D V4D30_08935 aat; (GenBank) leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D V4D30_07845 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D V4D30_04725 DegT/DnrJ/EryC1/StrS family aminotransferase K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122]
D V4D30_07515 cdaA; (GenBank) diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D V4D30_03800 macro domain-containing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D V4D30_02430 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D V4D30_07800 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D V4D30_03970 HDIG domain-containing metalloprotein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D V4D30_09495 HD domain-containing phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D V4D30_05290 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D V4D30_07460 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D V4D30_05135 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D V4D30_08685 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D V4D30_03260 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D V4D30_09855 SAM-dependent chlorinase/fluorinase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D V4D30_08905 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
C 99981 Carbohydrate metabolism
D V4D30_00240 lactate utilization protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D V4D30_01975 fdhD; (GenBank) formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D V4D30_03455 ferredoxin K05337 fer; ferredoxin
D V4D30_05890 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA
D V4D30_05885 FAD-dependent oxidoreductase K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB
D V4D30_05880 qmoC; (GenBank) quinone-interacting membrane-bound oxidoreductase complex subunit QmoC K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC
D V4D30_08100 TusE/DsrC/DsvC family sulfur relay protein K23077 dsrC; dissimilatory sulfite reductase related protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D V4D30_07725 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D V4D30_00300 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D V4D30_05770 AarF/ABC1/UbiB kinase family protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
D V4D30_07535 GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D V4D30_05470 cold-shock protein K03704 cspA; cold shock protein
D V4D30_05695 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D V4D30_04415 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D V4D30_08925 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D V4D30_06825 tig; (GenBank) trigger factor K03545 tig; trigger factor
D V4D30_02095 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D V4D30_07420 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC
D V4D30_03240 hypD; (GenBank) hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D V4D30_09825 hypE; (GenBank) hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D V4D30_03395 hypF; (GenBank) carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D V4D30_07585 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D V4D30_03245 OsmC family protein K07397 yhfA; putative redox protein
D V4D30_02960 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D V4D30_00325 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D V4D30_03405 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase
D V4D30_06400 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC
D V4D30_06330 YraN family protein K07460 yraN; putative endonuclease
D V4D30_02480 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D V4D30_02940 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein
D V4D30_05035 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D V4D30_01035 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D V4D30_02920 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
D V4D30_02545 P-loop NTPase K07321 cooC; CO dehydrogenase maturation factor
D V4D30_06265 AAA family ATPase K07321 cooC; CO dehydrogenase maturation factor
D V4D30_05560 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D V4D30_03975 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D V4D30_07545 putative nucleotidyltransferase substrate binding domain-containing protein K07182 K07182; CBS domain-containing protein
D V4D30_07550 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D V4D30_02735 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D V4D30_03635 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D V4D30_06240 Slp family lipoprotein K07285 slp; outer membrane lipoprotein
D V4D30_08275 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D V4D30_07830 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D V4D30_05400 cutA; (GenBank) divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D V4D30_00425 molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D V4D30_01970 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D V4D30_09205 SufD family Fe-S cluster assembly protein K09014 sufB; Fe-S cluster assembly protein SufB
D V4D30_00905 metal-dependent hydrolase K07038 K07038; inner membrane protein
D V4D30_05045 metal-dependent hydrolase K07038 K07038; inner membrane protein
D V4D30_08415 DedA family protein K03975 dedA; membrane-associated protein
C 99997 Function unknown
D V4D30_00645 DRTGG domain-containing protein K06873 K06873; uncharacterized protein
D V4D30_09820 fibronectin type III domain-containing protein K06882 K06882; uncharacterized protein
D V4D30_03565 DUF255 domain-containing protein K06888 K06888; uncharacterized protein
D V4D30_01895 DUF815 domain-containing protein K06923 K06923; uncharacterized protein
D V4D30_00255 PPC domain-containing DNA-binding protein K06934 K06934; uncharacterized protein
D V4D30_03145 hypothetical protein K06940 K06940; uncharacterized protein
D V4D30_07955 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D V4D30_02170 HD domain-containing protein K06950 K06950; uncharacterized protein
D V4D30_03375 KH domain-containing protein K06960 K06960; uncharacterized protein
D V4D30_05715 NYN domain-containing protein K06962 K06962; uncharacterized protein
D V4D30_09345 AAA family ATPase K07028 K07028; uncharacterized protein
D V4D30_05300 amidohydrolase family protein K07045 K07045; uncharacterized protein
D V4D30_03410 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D V4D30_06350 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D V4D30_09260 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D V4D30_06755 permease K07089 K07089; uncharacterized protein
D V4D30_02055 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_02805 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_03575 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_04125 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_04585 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_04640 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_08345 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_09980 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D V4D30_06495 metallophosphoesterase K07095 K07095; uncharacterized protein
D V4D30_02895 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D V4D30_02900 DUF6691 family protein K07112 K07112; uncharacterized protein
D V4D30_04925 yedE; (GenBank) YedE family putative selenium transporter K07112 K07112; uncharacterized protein
D V4D30_07595 ATP-binding protein K07133 K07133; uncharacterized protein
D V4D30_06520 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D V4D30_07580 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D V4D30_03175 C4-type zinc ribbon domain-containing protein K07164 K07164; uncharacterized protein
D V4D30_04375 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D V4D30_08845 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D V4D30_05175 DUF763 domain-containing protein K09003 K09003; uncharacterized protein
D V4D30_00060 Mut7-C RNAse domain-containing protein K09122 K09122; uncharacterized protein
D V4D30_04095 adenosine-specific kinase K09129 K09129; uncharacterized protein
D V4D30_05705 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D V4D30_07680 HEPN domain-containing protein K09132 K09132; uncharacterized protein
D V4D30_07850 HEPN domain-containing protein K09132 K09132; uncharacterized protein
D V4D30_08165 HEPN domain-containing protein K09132 K09132; uncharacterized protein
D V4D30_03300 DUF401 family protein K09133 K09133; uncharacterized protein
D V4D30_00465 amrA; (GenBank) AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein
D V4D30_06810 cyclophilin-like fold protein K09143 K09143; uncharacterized protein
D V4D30_08695 DUF116 domain-containing protein K09729 K09729; uncharacterized protein
D V4D30_03810 ribonuclease H-like YkuK family protein K09776 K09776; uncharacterized protein
D V4D30_08605 Trm112 family protein K09791 K09791; uncharacterized protein
D V4D30_05355 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D V4D30_07670 ribonuclease H-like domain-containing protein K07502 yprB; uncharacterized protein
D V4D30_10075 TIGR00153 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 6, 2025