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#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Trypanosoma brucei brucei</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        Tb927.8.7400 RNA polymerase IIA largest subunit	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        Tb927.4.5020 RNA polymerase IIA largest subunit	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        Tb927.4.3810 DNA-directed RNA polymerase II subunit 2, putative	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        Tb927.3.5500 DNA-directed RNA polymerase II subunit 3, putative	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        Tb11.57.0004 DNA-directed RNA polymerase II, putative	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        Tb11.01.6090 RNA polymerase-like protein	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        Tb11.02.5180 DNA-direcetd RNA polymerase II subunit 9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
D      Pol I, II, III common subunits
E        Tb10.389.0110 DNA-directed RNA polymerases II subunit, putative	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        Tb927.4.3490 DNA-directed RNA polymerase subunit, putative	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        Tb927.4.3510 DNA-directed RNA polymerase subunit, putative	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        Tb11.02.5790 RNA polymerase B subunit RPB8, putative	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        Tb927.3.1250 DNA-directed RNA polymerase subunit, putative	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
D      TFIIB
D      TFIID
E        Tb10.61.0330 transcription initiation factor TFIID-like protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
D      TFIIE
D      TFIIF
D      TFIIH
E        Tb927.8.6540 DNA repair and transcription factor protein, putative	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        Tb10.70.1900 hypothetical protein, conserved	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        Tb927.3.5100 DNA repair helicase and transcription factor protein, putative	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        Tb11.01.7950 DNA repair helicase and transcription factor protein, putative	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        Tb927.8.5980 TFIIH basal transcription factor complex helicase subunit, putative	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
C    Mediator complex
D      Head
D      Middle
D      Tail
D      CDK-module
D      Other mediators
E        Tb11.01.8300 hypothetical protein, conserved	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        Tb927.7.6980 hypothetical protein, conserved	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
D      SWI/SNF complex
D      RSC complex
D      Others
C    Other transcription-related factors
D      Transcription elongation factors
E        Tb927.2.3580 transcription elongation factor S-II, putative	K03145 TFIIS; transcription elongation factor S-II 
E        Tb11.02.2600 transcription elongation factor, putative	K03145 TFIIS; transcription elongation factor S-II 
E        Tb09.211.4290 hypothetical protein, conserved	K15171 SUPT4H1; transcription elongation factor SPT4 
E        Tb927.2.5030 transcription initiation protein, putative	K15172 SUPT5H; transcription elongation factor SPT5 
D      Transcription termination factor
E        Tb11.01.6170 cleavage and polyadenylation specificity factor-like protein, putative	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        Tb927.4.1340 cleavage and polyadenylation specificity factor subunit, putative	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        Tb11.01.4600 cleavage and polyadenylation specificity factor 30 kDa subunit	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        Tb11.01.0450 serine/threonine protein phosphatase catalytic subunit, putative	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        Tb927.8.7390 serine/threonine protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        Tb927.4.5030 serine/threonine protein phosphatase PP1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        Tb10.70.0610 5'-3' exoribonuclease XRND, putative	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        Tb927.8.2810 5'-3' exonuclease XRNC, putative	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
D      PAF1 complex
E        Tb11.01.1990 hypothetical protein, conserved	K15175 CDC73; parafibromin 
E        Tb927.3.3220 hypothetical protein, conserved	K15176 CTR9; RNA polymerase-associated protein CTR9 
D      NELF complex
D      Super elongation complex (SEC)
D      Little elongation complex (LEC)
D      Brd4/P-TEFb complex
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
D      DBIRD complex
D      Others
E        Tb10.6k15.2490 hypothetical protein, conserved	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        Tb927.2.5150 TPR-repeat protein, putative	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        Tb11.02.1040 XPA-interacting protein, putative	K24104 GPN; GPN-loop GTPase 
E        Tb927.3.1150 hypothetical protein, conserved	K24104 GPN; GPN-loop GTPase 
E        Tb927.7.1450 hypothetical protein, conserved	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        Tb10.70.4870 DNA-directed RNA polymerase III largest subunit	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        TB927.1.540 DNA-directed RNA polymerase III, putative	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        Tb10.61.1040 DNA-directed RNA polymerase subunit alpha	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        Tb11.01.0625 DNA-dependent RNA polymerases, putative	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        Tb11.01.4820 hypothetical protein, conserved	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        Tb10.61.1360 RNA polymerase III C11 subunit, putative	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        Tb10.389.0110 DNA-directed RNA polymerases II subunit, putative	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        Tb927.4.3490 DNA-directed RNA polymerase subunit, putative	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        Tb927.4.3510 DNA-directed RNA polymerase subunit, putative	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        Tb11.02.5790 RNA polymerase B subunit RPB8, putative	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        Tb927.3.1250 DNA-directed RNA polymerase subunit, putative	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
D      TFIIIB
E        Tb10.61.0330 transcription initiation factor TFIID-like protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        Tb11.03.0670 transcription factor, putative	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
D      TFIIIC
D      TFIIIC, fungi type
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        Tb09.211.1510 small nuclear RNA gene activation protein 50	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
D      Others
E        Tb927.8.7250 hypothetical protein, conserved	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
E        Tb927.4.5140 hypothetical protein, conserved	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        Tb927.8.5090 DNA-directed RNA polymerase I largest subunit	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        Tb11.03.0450 RNA polymerase I second largest subunit	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        Tb10.61.1040 DNA-directed RNA polymerase subunit alpha	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        Tb11.01.0625 DNA-dependent RNA polymerases, putative	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        Tb11.01.2190 DNA-directed RNA polymerase, putative	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        Tb10.389.0110 DNA-directed RNA polymerases II subunit, putative	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        Tb927.4.3490 DNA-directed RNA polymerase subunit, putative	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        Tb927.4.3510 DNA-directed RNA polymerase subunit, putative	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        Tb11.02.5790 RNA polymerase B subunit RPB8, putative	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        Tb927.3.1250 DNA-directed RNA polymerase subunit, putative	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        Tb10.61.0330 transcription initiation factor TFIID-like protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
D      Transcription elongation factors
E        Tb09.211.4290 hypothetical protein, conserved	K15171 SUPT4H1; transcription elongation factor SPT4 
E        Tb927.2.5030 transcription initiation protein, putative	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        Tb927.2.1810 transcription activator, putative	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
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A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
D      TFE
D      TFS
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#Last updated: April 9, 2024