+D Transcription factors KO
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Transcription Factors - Tigriopus californicus (tidepool copepod)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
D 131890280 transcription factor JunB-like K04448 JUN; transcription factor AP-1
D 131891744 transcription factor JunD-like K04448 JUN; transcription factor AP-1
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
D 131887107 transcription factor Maf-like isoform X1 K09037 MAFF_G_K; transcription factor MAFF/G/K
D 131891451 transcription factor MafA-like K09037 MAFF_G_K; transcription factor MAFF/G/K
D 131891668 transcription factor MafA-like K09037 MAFF_G_K; transcription factor MAFF/G/K
D 131892045 transcription factor MafA-like K09037 MAFF_G_K; transcription factor MAFF/G/K
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
D 131888375 cyclic AMP-responsive element-binding protein 1-like K05870 CREB1; cyclic AMP-responsive element-binding protein 1
D 131881547 cyclic AMP-responsive element-binding protein-like K09053 ATF1; activating transcription factor 1
D 131888364 cyclic AMP-dependent transcription factor ATF-6 alpha-like isoform X1 K09054 ATF6A; cyclic AMP-dependent transcription factor ATF-6 alpha
C C/EBP-like factors
D 131885969 CCAAT/enhancer-binding protein homolog 2-like K10049 CEBPG; CCAAT/enhancer binding protein (C/EBP), gamma
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
D 131887948 protein daughterless-like K15603 TCF4_12; transcription factor 4/12
C Myogenic transcription factors
D 131877922 myogenic factor 6-like K18484 MYF5; myogenic factor 5
C Achaete-Scute
D 131878286 achaete-scute homolog 1-like K09067 ASCL; achaete-scute complex protein
D 131878377 helix-loop-helix protein 4-like K09067 ASCL; achaete-scute complex protein
D 131878427 achaete-scute complex protein T5-like K09067 ASCL; achaete-scute complex protein
C Tal/Twist/Atonal/Hen, Lymphoid factors
D 131877101 protein lyl-1-like K09068 TAL; T-cell acute lymphocytic leukemia protein
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
D 131888022 protein twist-like K09069 TWIST; twist
D 131888354 transcription factor 15-like K09070 TCF15; transcription factor 15
D 131877620 heart- and neural crest derivatives-expressed protein 2-like K18486 HAND2; heart-and neural crest derivatives-expressed protein 2
D 131882292 pancreas transcription factor 1 subunit alpha-like K09073 PTF1A; pancreas-specific transcription factor 1a
D 131893136 pancreas transcription factor 1 subunit alpha-like K22400 FERD3L; Fer3-like protein
C Tal/Twist/Atonal/Hen, HEN
D 131880419 basic helix-loop-helix transcription factor scleraxis-like K09075 NHLH; nescient helix-loop-helix protein
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
D 131892146 neurogenic differentiation factor 1-like K09081 NEUROG1; neurogenin 1
D 131879630 protein atonal-like K09083 ATOH1_7; atonal protein 1/7
D 131890770 protein atonal-like K09083 ATOH1_7; atonal protein 1/7
D 131891746 transcription factor atoh7-like K09083 ATOH1_7; atonal protein 1/7
D 131892012 transcription factor ATOH8-like K09084 ATOH8; atonal protein 8
D 131885972 neurogenic differentiation factor 4-like K08040 BHLHA15; class A basic helix-loop-helix protein 15
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
D 131882030 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate
D 131882031 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate
D 131882145 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate
D 131882470 enhancer of split mbeta protein-like K09090 HESN; hairy and enhancer of split, invertebrate
D 131882565 ABC transporter H family member 4-like K09090 HESN; hairy and enhancer of split, invertebrate
D 131879785 hairy/enhancer-of-split related with YRPW motif protein 1-like K09091 HEY; hairy and enhancer of split related with YRPW motif
C Hairy, Fungal regulators
C Factors with PAS domain
D 131888612 aryl hydrocarbon receptor nuclear translocator homolog K09097 ARNT; aryl hydrocarbon receptor nuclear translocator
D 131890895 protein trachealess-like isoform X1 K09098 NPAS1_3; neuronal PAS domain-containing protein 1/3
D 131884632 circadian locomoter output cycles protein kaput-like K09026 NPAS2; neuronal PAS domain-containing protein 2
D 131890212 PAS domain-containing protein cky-1-like isoform X1 K26457 NPAS4; neuronal PAS domain-containing protein 4
D 131884237 protein cycle-like isoform X1 K02296 ARNTL; aryl hydrocarbon receptor nuclear translocator-like protein 1
D 131879966 single-minded homolog 1-like isoform X1 K09100 SIM; single-minded
C Yabby
C INO
C HLH domain only
D 131879978 transcription factor collier-like isoform X1 K09103 EBF; early B-cell factor
D 131879979 transcription factor unc-3-like isoform X1 K09103 EBF; early B-cell factor
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
D 131887722 upstream stimulatory factor 1-like K09106 USF; upstream stimulatory factor
D 131877653 sterol regulatory element-binding protein 1-like isoform X1 K07197 SREBP1; sterol regulatory element-binding transcription factor 1
D 131877532 helix-loop-helix protein 11-like K09108 TFAP4; transcription factor AP-4
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
D 131882673 protein max-like K04453 MAX; Max protein
D 131882977 max-like protein X K09113 MLX; MAX-like protein X
D 131883368 LOW QUALITY PROTEIN: max-like protein X K09113 MLX; MAX-like protein X
D 131880194 max-interacting protein 1-like K09114 MXD; MAX dimerization protein
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
D 131893681 nuclear factor 1 C-type-like isoform X1 K09169 NFIB; nuclear factor I/B
D 131893057 uncharacterized protein LOC131893057 isoform X1 K09172 NFIN; nuclear factor I, invertebrate
C RF-X
D 131892079 DNA-binding protein RFX2-like isoform X1 K09173 RFX1_2_3; regulatory factor X 1/2/3
D 131886841 transcription factor RFX3-like K09174 RFX4; regulatory factor X 4
C AP-2 (bHSH)
D 131885853 transcription factor AP-2-epsilon-like K09176 TFAP2A_B; transcription factor AP-2 alpha/beta
D 131884576 transcription factor AP-2-alpha-like isoform X1 K09177 TFAP2C; transcription factor AP-2 gamma
D 131885846 transcription factor AP-2-epsilon-like isoform X1 K09179 TFAP2E; transcription factor AP-2 epsilon
B Zinc finger
C Cys4 thyroid hormone receptor-like
D 131881171 thyroid hormone receptor beta-A-like K08362 THRB; thyroid hormone receptor beta
D 131882656 nuclear receptor subfamily 1 group I member 3-like isoform X1 K08536 NR1H3; liver X receptor alpha
D 131884821 ecdysone receptor-like K08536 NR1H3; liver X receptor alpha
D 131883504 vitamin D3 receptor-like K08539 VDR; vitamin D3 receptor
C Cys4 hepatocyte nuclear factor 4-like
D 131890596 hepatocyte nuclear factor 4-gamma-like isoform X1 K08542 NR2A3; hepatocyte nuclear factor 4-beta
D 131880059 retinoic acid receptor RXR-alpha-B-like K08526 RXRG; retinoid X receptor gamma
D 131881237 protein dissatisfaction-like K08544 NR2C2; testicular receptor 4
D 131886645 orphan steroid hormone receptor 2-like K08544 NR2C2; testicular receptor 4
D 131880477 nuclear receptor subfamily 2 group E member 1-like K08545 NR2E1; nuclear receptor subfamily 2 group E member 1
D 131879108 photoreceptor-specific nuclear receptor-like isoform X1 K08546 NR2E3; nuclear receptor subfamily 2 group E member 3
D 131879572 uncharacterized protein LOC131879572 K14032 NR2F3; nuclear receptor subfamily 2 group F member 3
C Cys4 estrogen receptor-like
D 131884312 steroid hormone receptor ERR1-like isoform X1 K08703 NR3BN; estrogen-related receptor ERR
C Cys4 nerve growth factor IB-like
D 131885450 nuclear receptor subfamily 4 group A member 2-like isoform X1 K08558 NR4A2; nuclear receptor subfamily 4 group A member 2
C Cys4 Fushi tarazu-F1-like
D 131888717 nuclear hormone receptor FTZ-F1-like isoform X1 K08027 NR5A2; nuclear receptor subfamily 5 group A member 2
C Cys4 germ cell nuclear factor
D 131888910 hormone receptor 4-like isoform X1 K09185 NR6AN; nuclear receptor subfamily 6 group A
C Cys4 Knirps/DAX1-like
D 131880898 estrogen receptor-like K08706 NR0AN; nuclear receptor subfamily 0 group A
C Cys4 GATA-factors
D 131886088 GATA-binding factor 2-like isoform X1 K17894 GATA2; GATA-binding protein 2
D 131886780 trans-acting T-cell-specific transcription factor GATA-3-like isoform X1 K17894 GATA2; GATA-binding protein 2
D 131886949 transcription factor GATA-5-like isoform X1 K17894 GATA2; GATA-binding protein 2
D 131887112 transcription factor GATA-3-like isoform X1 K17894 GATA2; GATA-binding protein 2
D 131884091 transcription factor GATA-4-like isoform X1 K09183 GATA4; GATA-binding protein 4
D 131890085 uncharacterized protein LOC131890085 K23407 GATAD1; GATA zinc finger domain-containing protein 1
D 131879915 transcriptional repressor p66-beta-like K23194 GATAD2; transcriptional repressor p66
D 131877238 metastasis-associated protein MTA3-like K11660 MTA; metastasis-associated protein MTA
D 131888609 transcriptional regulator ATRX-like isoform X1 K10779 ATRX; transcriptional regulator ATRX
C Cys2His2 SP/KLF family and related proteins
D 131886206 Krueppel-like factor luna isoform X1 K17845 KLF2; krueppel-like factor 2
D 131886211 Kruppel-like factor 2 K17845 KLF2; krueppel-like factor 2
D 131886545 Kruppel-like factor 2 K17845 KLF2; krueppel-like factor 2
D 131877050 Krueppel-like factor 6 K15605 KLF3; krueppel-like factor 3
D 131891094 Krueppel-like factor luna K15605 KLF3; krueppel-like factor 3
D 131885283 Krueppel-like factor 12 K09206 KLF5; krueppel-like factor 5
D 131884627 Krueppel-like factor 6 K09207 KLF6_7; krueppel-like factor 6/7
D 131885247 Krueppel-like factor 6 K09207 KLF6_7; krueppel-like factor 6/7
D 131880617 pair-rule protein odd-paired-like K09208 KLF9S; krueppel-like factor 9/13/14/16
C Cys2His2 GLI-like
D 131879542 zinc finger protein ZIC 1-like K09224 ZIC1; zinc finger protein ZIC 1
D 131879416 zinc finger protein ZIC 4-like K09225 ZIC4; zinc finger protein ZIC 4
C Cys2His2 Snail
D 131885697 zinc finger protein SNAI2-like K05706 SNAI2; snail 2
D 131884451 zinc finger protein 362-like K09219 SCRT; scratch
D 131890894 insulinoma-associated protein 1a-like K25795 INSM; insulinoma-associated protein
C Cys2His2 BTB-ZF factors
D 131879821 protein tramtrack, beta isoform-like isoform X1 K09237 TTK; tramtrack
D 131876829 uncharacterized protein LOC131876829 K27896 K27896; TTK-type BTB protein
D 131878342 longitudinals lacking protein-like K27896 K27896; TTK-type BTB protein
D 131878415 protein tramtrack, alpha isoform-like isoform X1 K27896 K27896; TTK-type BTB protein
D 131880686 broad-complex core protein isoforms 1/2/3/4/5-like K27896 K27896; TTK-type BTB protein
D 131881236 uncharacterized protein LOC131881236 isoform X1 K27896 K27896; TTK-type BTB protein
D 131885310 protein abrupt-like isoform X1 K27896 K27896; TTK-type BTB protein
D 131885430 protein bric-a-brac 2-like isoform X1 K27896 K27896; TTK-type BTB protein
D 131885606 zinc finger protein chinmo-like isoform X1 K27896 K27896; TTK-type BTB protein
D 131885685 protein bric-a-brac 1-like isoform X1 K27896 K27896; TTK-type BTB protein
D 131885786 broad-complex core protein isoforms 1/2/3/4/5-like K27896 K27896; TTK-type BTB protein
D 131885896 protein tramtrack, beta isoform-like isoform X1 K27896 K27896; TTK-type BTB protein
D 131888119 protein abrupt-like K27896 K27896; TTK-type BTB protein
D 131893125 broad-complex core protein-like K27896 K27896; TTK-type BTB protein
C Cys2His2 BED
D 131876905 E3 SUMO-protein ligase ZBED1-like K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
D 131889014 zinc finger BED domain-containing protein 4-like K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
D 131889869 zinc finger BED domain-containing protein 4-like K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
D 131891103 zinc finger BED domain-containing protein 4-like K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
D 131891323 zinc finger BED domain-containing protein 4-like K24637 ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
D 131883015 fez family zinc finger protein erm-like K09215 OSR; odd-skipped
D 131883855 protein bowel-like K09215 OSR; odd-skipped
D 131887665 zinc finger protein 37-like K09223 GFI1; growth factor independent 1
D 131892398 transcriptional repressor CTCF-like K23195 CTCF; transcriptional repressor CTCF
D 131889303 zinc finger protein 782-like K09191 GTF3A; general transcription factor IIIA
D 131890623 transcriptional repressor protein YY1-like K09201 YY; transcription factor YY
D 131888934 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
D 131893209 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
D 131882837 zinc finger protein rotund-like isoform X1 K23480 ZNF362_384; zinc finger protein 362/384
D 131879042 zinc finger protein 154-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 131885212 zinc finger protein 845-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 131888605 zinc finger protein 112-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 131892955 zinc finger protein 718-like K09228 KRAB; KRAB domain-containing zinc finger protein
D 131886055 zinc finger protein 91-like K09230 SCAN; SCAN domain-containing zinc finger protein
D 131886539 zinc finger and SCAN domain-containing protein 21-like isoform X1 K24502 FEZF; Fez family zinc finger protein
D 131886832 histone H4 transcription factor-like K25794 HINFP; histone H4 transcription factor
D 131887758 uncharacterized protein LOC131887758 K27895 ATMIN; ATM interactor
D 131878180 protein krueppel-like K09231 KR; krueppel
C Cys2HisCys zinc factors
D 131892935 histone acetyltransferase KAT8-like K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48]
D 131886588 histone acetyltransferase KAT6B-like K11307 MYST2; histone acetyltransferase MYST2 [EC:2.3.1.48]
D 131887144 histone acetyltransferase KAT5-like K11304 TIP60; histone acetyltransferase HTATIP [EC:2.3.1.48]
D 131884709 lethal(3)malignant brain tumor-like protein 4 isoform X1 K24387 L3MBTL; lethal(3)malignant brain tumor-like protein
D 131888864 cell growth-regulating nucleolar protein-like K15263 LYER; cell growth-regulating nucleolar protein
C Cys3His zinc factors
D 131887710 uncharacterized protein LOC131887710 K15690 RC3H; RING finger and CCCH-type zinc finger domain-containing protein
D 131877261 transcription factor mef2A-like K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
C Cys2CysHis zinc factors
D 131882824 THAP domain-containing protein 1-like isoform X1 K23203 THAP1_3; THAP domain-containing protein 1/3
C CXXC CpG-binding proteins
D 131887070 CXXC-type zinc finger protein 1-like K14960 CXXC1; COMPASS component SPP1
D 131891511 methylcytosine dioxygenase TET-like isoform X1 K24309 TET2_3; methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
D 131878756 DNA (cytosine-5)-methyltransferase 1-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 131888008 DNA (cytosine-5)-methyltransferase PliMCI-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 131876865 jmjC domain-containing histone demethylation protein 1-like K10276 FBXL10_11; F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
D 131878294 PHD finger protein 1-like K11486 PHF19; PHD finger protein 19
D 131881828 protein shuttle craft-like isoform X1 K12236 NFX1; transcriptional repressor NF-X1
D 131893290 zinc finger C4H2 domain-containing protein-like isoform X1 K24369 ZC4H2; zinc finger C4H2 domain-contaning protein
B Helix-turn-helix
C Homeo domain ANTP: HOXL
D 131886716 homeobox protein Hox-B1a-like isoform X1 K09301 HOX_1; homeobox protein HoxA/B/D1
D 131879399 homeobox protein Hox-B4-like K09304 HOX_4; homeobox protein HoxA/B/C/D4
D 131879410 homeobox protein Hox-B5-like K09305 HOX_5; homeobox protein HoxA/B/C5
D 131877916 homeobox protein Hox-B4-like K09307 HOX_7; homeobox protein HoxA/B7
D 131878121 homeotic protein ultrabithorax-like K09307 HOX_7; homeobox protein HoxA/B7
D 131878007 homeotic protein caudal-like isoform X1 K09312 CDX1_4; homeobox protein CDX1/4
D 131878104 homeotic protein caudal-like isoform X1 K09312 CDX1_4; homeobox protein CDX1/4
D 131878828 homeobox protein lin-39-like K09321 GBX; homeobox protein GBX
D 131888344 homeobox protein MOX-1-like K09322 MEOX; homeobox protein MOX
C Homeo domain ANTP: NKL
D 131880476 NK1 transcription factor-related protein 1-like K09309 NKX1; homeobox protein Nkx-1
D 131883239 homeobox protein Nkx-2.4-like isoform X1 K09342 NKX2-1; homeobox protein Nkx-2.1
D 131890968 homeobox protein Nkx-2.2a-like K08029 NKX2-2; homeobox protein Nkx-2.2
D 131881316 homeobox protein HMX3-like K09349 NKX5; homeobox protein Nkx-5
D 131881017 homeobox protein Nkx-6.3-like K09350 NKX6-2; homeobox protein Nkx-6.2
D 131881837 homeotic protein distal-less-like isoform X1 K18488 DLX2; homeobox protein DLX2
D 131880096 T-cell leukemia homeobox protein 3-like K15606 TLX2; T-cell leukemia homeobox protein 2
D 131881447 T-cell leukemia homeobox protein 3-like K15607 TLX3; T-cell leukemia homeobox protein 3
D 131890893 brain-specific homeobox protein homolog K09339 HLX1; homeobox protein HLX1
D 131880832 homeotic protein empty spiracles-like K09317 EMX; homeobox protein EMX
D 131882570 homeobox protein engrailed-1a-like K09319 EN; homeobox protein engrailed
D 131882580 homeobox protein engrailed-2-A-like K09319 EN; homeobox protein engrailed
D 131883740 segmentation polarity homeobox protein engrailed-like K09319 EN; homeobox protein engrailed
D 131880345 muscle segmentation homeobox-like K09341 MSX; homeobox protein MSX
D 131881049 homeobox protein GHOX-7-like K09341 MSX; homeobox protein MSX
D 131889045 barH-like 2 homeobox protein K09360 BARHL; BarH-like
D 131890301 brain-specific homeobox protein homolog K24874 BSX; brain-specific homeobox protein
D 131878349 homeobox protein Hox-B3-like K24875 DBX; homeobox protein DBX
C Homeo domain Paired-related
D 131879390 homeobox protein aristaless-like K09452 ARX; homeobox protein aristaless-related
D 131879490 homeobox protein ARX-like isoform X1 K09452 ARX; homeobox protein aristaless-related
D 131891074 homeobox protein OTX1-like isoform X1 K09326 OTX1; homeobox protein OTX1
D 131884388 homeobox protein prophet of Pit-1-like K09327 PROP1; homeobox protein prophet of Pit-1
D 131885093 uncharacterized protein LOC131885093 K09328 UNC4; homeobox protein Unc-4
D 131885117 homeobox protein unc-4-like K09328 UNC4; homeobox protein Unc-4
D 131877531 paired mesoderm homeobox protein 2A-like K09330 PHOX2; paired mesoderm homeobox protein 2
D 131892595 homeobox protein orthopedia-like K09331 SHOX; short stature homeobox protein
D 131879642 homeobox protein B-H1-like isoform X1 K09332 RAX; retina and anterior neural fold homeobox protein
D 131884387 visual system homeobox 2-like K09336 VSX2; visual system homeobox protein 2
D 131893179 pituitary homeobox x-like K09357 PITX3; paired-like homeodomain transcription factor 3
D 131892339 homeobox protein aristaless-like K24895 DRGX; dorsal root ganglia homeobox protein
D 131883014 paired box pox-meso protein-like K09382 PAX1_9; paired box protein 1/9
D 131891722 paired box protein Pax-5-like isoform X1 K15608 PAX2; paired box protein 2
D 131881567 protein gooseberry-like isoform X1 K09381 PAX3_7; paired box protein 3/7
D 131881680 protein gooseberry-like isoform X1 K09381 PAX3_7; paired box protein 3/7
D 131882348 protein gooseberry-like isoform X1 K09381 PAX3_7; paired box protein 3/7
D 131878348 paired box protein Pax-6-like K08031 PAX6; paired box protein 6
D 131878532 paired box protein Pax-6-like K08031 PAX6; paired box protein 6
C Homeo domain LIM
D 131888590 insulin gene enhancer protein ISL-1-like isoform X1 K18492 ISL2; insulin gene enhancer protein ISL-2
D 131888591 insulin gene enhancer protein ISL-3-like isoform X1 K18492 ISL2; insulin gene enhancer protein ISL-2
D 131889244 LIM homeobox transcription factor 1-alpha-like K09371 LMX1; LIM homeobox transcription factor 1
D 131886383 protein lin-11-like K09372 LHX1; LIM homeobox protein 1
D 131886757 LIM/homeobox protein Lhx1-like K09372 LHX1; LIM homeobox protein 1
D 131886759 LIM/homeobox protein Lhx5-like K09372 LHX1; LIM homeobox protein 1
D 131889429 LIM/homeobox protein Lhx2-like isoform X1 K09373 LHX2_9; LIM homeobox protein 2/9
D 131889430 LIM/homeobox protein Lhx2-like K09373 LHX2_9; LIM homeobox protein 2/9
D 131888914 LIM/homeobox protein Lhx3-like K09374 LHX3_4; LIM homeobox protein 3/4
D 131877527 cysteine and glycine-rich protein 1-like isoform X1 K09377 CSRP; cysteine and glycine-rich protein
D 131877586 muscle LIM protein 1-like K09377 CSRP; cysteine and glycine-rich protein
C Homeo domain POU
D 131890969 protein nubbin-like K09364 POU2F; POU domain transcription factor, class 2
D 131880969 silk gland factor 3-like isoform X1 K09365 POU3F; POU domain transcription factor, class 3
D 131878025 POU domain, class 4, transcription factor 3-like K09366 POU4F; POU domain transcription factor, class 4
D 131877260 POU domain, class 6, transcription factor 1-like K09368 POU6F; POU domain transcription factor, class 6
C Homeo domain SINE
D 131883978 homeobox protein six1b-like isoform X1 K15614 SIX1; homeobox protein SIX1
D 131890127 homeobox protein SIX6-like K19473 SIX3_6; homeobox protein SIX3/6
D 131883480 homeobox protein six1b-like K15615 SIX4; homeobox protein SIX4
C Homeo domain ZF
C Homeo domain CUT
D 131880569 protein CASP-like K09313 CUTL; homeobox protein cut-like
C Homeo domain PROS
C Homeo domain TALE
D 131877047 pre-B-cell leukemia transcription factor 1-like K09355 PBX1; pre-B-cell leukemia transcription factor 1
D 131889105 pre-B-cell leukemia transcription factor 1-like isoform X1 K09355 PBX1; pre-B-cell leukemia transcription factor 1
D 131889638 homeobox protein extradenticle-like isoform X1 K09355 PBX1; pre-B-cell leukemia transcription factor 1
D 131884673 homeobox protein araucan-like isoform X1 K24889 IRX; iroquois-class homeodomain protein IRX
D 131885714 uncharacterized protein LOC131885714 K24890 MKX; homeobox protein Mohawk
D 131889798 homeobox protein unc-62-like isoform X1 K24891 PKNOX; homeobox protein PKNOX
D 131889846 homeobox protein homothorax-like K16672 HTH; homeobox protein homothorax
C Homeo domain other
D 131880172 homeobox protein rough-like K09362 K09362; homeo domain only family, other
C Fork head/winged helix developmental regulators
D 131884329 silk gland factor 1-like K08035 FOXA2; forkhead box protein A2, hepatocyte nuclear factor 3-beta
D 131885570 fork head domain-containing protein crocodile-like K09396 FOXC; forkhead box protein C
D 131890951 fork head domain transcription factor slp1-like K09385 FOXG; forkhead box protein G
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
D 131883275 transcription factor E2F3-like isoform X1 K06620 E2F3; transcription factor E2F3
D 131885455 transcription factor E2F5-like K04682 E2F4_5; transcription factor E2F4/5
D 131878600 transcription factor E2F7-like K09391 E2F7_8; transcription factor E2F7/8
C Fork head/winged helix cell cycle-controlling factors, DP
D 131879362 transcription factor Dp-1-like K09392 TFDP2; transcription factor Dp-2
C Fork head/winged helix other regulators
D 131885505 forkhead box protein D3-B-like K09397 FOXD; forkhead box protein D
D 131889729 forkhead box protein K1-like isoform X1 K09404 FOXK; forkhead box protein K
D 131876951 forkhead box protein D1-like isoform X1 K09405 FOXL; forkhead box protein L
D 131885295 forkhead box protein L1-like K09405 FOXL; forkhead box protein L
D 131886643 forkhead box protein P1-like K23582 FOXP1; forkhead box protein P1
D 131878940 fork head domain-containing protein FD4-like K09411 FOXX; forkhead box protein, other
C Stork head/winged helix factors
D 131878937 uncharacterized protein LOC131878937 K28389 STOX; storkhead-box protein
C Heat shock factors
D 131889000 heat shock factor protein-like K09414 HSF1; heat shock transcription factor 1
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
D 131888404 mesoderm induction early response protein 1-like K28169 MIER1; mesoderm induction early response protein 1
C Tryptophan clusters Ets-type
D 131877443 ets DNA-binding protein pokkuri-like isoform X1 K03211 ETV6_7; ETS translocation variant 6/7
D 131883641 ETS-like protein pointed K02678 ETS1; C-ets-1
D 131877537 protein C-ets-1-like isoform X1 K21932 ETS2; C-ets-2
D 131890818 Friend leukemia integration 1 transcription factor-like K09435 ERG; transcriptional regulator ERG
D 131890020 LOW QUALITY PROTEIN: transcriptional regulator ERG homolog K09437 FEV; ETS oncogene family protein FEV
D 131889535 DNA-binding protein Ets97D-like K09441 GABPA; GA-binding protein transcription factor, alpha
C Tryptophan clusters interferon-regulating factors
C TEA domain
D 131878387 transcriptional enhancer factor TEF-3-like isoform X1 K09448 TEAD; transcriptional enhancer factor
C ARID
D 131879130 protein dead ringer homolog K25856 ARID3; AT-rich interactive domain-containing protein 3
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
D 131891034 transcription factor p65-like K09254 REL; c-Rel proto-oncogene protein
C RHR (Rel homology region) Ankyrin only
D 131887966 NF-kappa-B inhibitor cactus-like K04734 NFKBIA; NF-kappa-B inhibitor alpha
D 131887815 tonsoku-like protein K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
D 131888501 GA-binding protein subunit beta-2-like K09454 GABPB; GA-binding protein transcription factor, beta
C RHR (Rel homology region) NF-AT
C STAT
D 131886801 signal transducer and activator of transcription 5B-like isoform X1 K11224 STAT5B; signal transducer and activator of transcription 5B
D 131889088 signal transducer and activator of transcription 5B-like isoform X1 K11224 STAT5B; signal transducer and activator of transcription 5B
C p53
D 131884647 cellular tumor antigen p53-like K04451 TP53; tumor protein p53
D 131885789 cellular tumor antigen p53-like isoform X1 K04451 TP53; tumor protein p53
D 131886087 cellular tumor antigen p53-like isoform X1 K10149 TP63; tumor protein p63
C MADS-box regulators of differentiation, MEF-2
D 131878939 myocyte-specific enhancer factor 2C-like isoform X1 K09262 MEF2D; MADS-box transcription enhancer factor 2D
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
D 131890917 serum response factor homolog isoform X1 K04378 SRF; serum response factor
C SAND domain-containing proteins
C TATA-binding proteins
D 131883937 LOW QUALITY PROTEIN: uncharacterized protein LOC131883937 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C HMG SOX
D 131878818 transcription factor Sox-2-like K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B)
D 131878819 transcription factor sox-3-like K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B)
D 131879038 transcription factor Sox-21-A-like K09267 SOX1S; transcription factor SOX1/3/14/21 (SOX group B)
D 131879049 transcription factor Sox-2-like isoform X1 K16796 SOX2; transcription factor SOX2 (SOX group B)
D 131884958 transcription factor sem-2-like K23581 SOX4; transcription factor SOX4 (SOX group C)
D 131885171 transcription factor SOX-8-like K23581 SOX4; transcription factor SOX4 (SOX group C)
D 131884606 transcription factor SOX-8-like isoform X1 K09270 SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)
C HMG TCF-1
D 131887804 protein pangolin, isoforms A/H/I/S-like isoform X1 K04491 TCF7L2; transcription factor 7-like 2
D 131888978 protein pangolin, isoforms A/H/I/S-like isoform X1 K04491 TCF7L2; transcription factor 7-like 2
C HMG TOX
D 131889406 TOX high mobility group box family member 4-like K28489 TOX; thymocyte selection-associated high mobility group box protein
D 131889756 thymocyte selection-associated high mobility group box protein TOX-like isoform X1 K28489 TOX; thymocyte selection-associated high mobility group box protein
D 131889775 hybrid signal transduction histidine kinase A-like K28489 TOX; thymocyte selection-associated high mobility group box protein
D 131889484 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
D 131889545 high mobility group protein 20A-like K24660 HMG20A; high mobility group protein 20A
C HMG2-related
D 131887440 FACT complex subunit Ssrp1-like K09272 SSRP1; FACT complex subunit SSRP1/POB3
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
D 131884693 nuclear transcription factor Y subunit alpha-like K08064 NFYA; nuclear transcription factor Y, alpha
D 131877004 uncharacterized protein LOC131877004 K08065 NFYB; nuclear transcription Y subunit beta
D 131889275 nuclear transcription factor Y subunit gamma-like K08066 NFYC; nuclear transcription factor Y, gamma
C Grainyhead
D 131877245 uncharacterized protein LOC131877245 K09275 TFCP2; transcription factor CP2 and related proteins
D 131884010 grainyhead-like protein 1 homolog K09275 TFCP2; transcription factor CP2 and related proteins
D 131891881 uncharacterized protein LOC131891881 isoform X1 K09275 TFCP2; transcription factor CP2 and related proteins
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
D 131881570 Y-box factor homolog K09276 YBX1; Y-box-binding protein 1
C Cold-shock domain factors, FRG Y2-like
C Runt
D 131886920 protein lozenge-like K20213 RUN; RUNX transcription factor Runt
C MYRF
D 131891292 uncharacterized protein LOC131891292 K24768 MYRF; myelin regulatory factor [EC:3.4.-.-]
B Other transcription factors
C HMGI(Y)
C NUPR
C Pocket domain Rb
D 131884510 retinoblastoma-like protein 1 K04681 RBL1; retinoblastoma-like protein 1
C Pocket domain CBP
D 131877348 histone acetyltransferase p300-like K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48]
C T-box
D 131881354 T-box transcription factor T-A-like K10172 BRA; brachyury protein
D 131879248 T-box transcription factor TBX1-A-like isoform X1 K10175 TBX1; T-box protein 1
D 131886392 T-box transcription factor TBX3-like isoform X1 K10176 TBX2; T-box protein 2
D 131886850 optomotor-blind protein-like isoform X1 K10176 TBX2; T-box protein 2
D 131877357 T-box transcription factor TBX20-like isoform X1 K10183 TBX18; T-box protein 18
D 131885304 T-box protein H15-like K10185 TBX20; T-box protein 20
D 131885305 T-box transcription factor TBX22-like K10185 TBX20; T-box protein 20
D 131885522 T-box protein 12-like K10185 TBX20; T-box protein 20
C DMRT
D 131885436 doublesex- and mab-3-related transcription factor A1-like K19491 DMRT4_5; doublesex- and mab-3-related transcription factor 4/5
C LRRFIP
D 131881847 myosin-6-like isoform X1 K26434 LRRFIP; leucine-rich repeat flightless-interacting protein
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C NAC
C Copper-fist proteins fungal regulators
C Others
D 131883030 transmembrane protein 18-like K22145 TMEM18; transmembrane protein 18
D 131879143 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like K22758 CHCHD2; coiled-coil-helix-coiled-coil-helix domain-containing protein 2
D 131886035 recombining binding protein suppressor of hairless-like K06053 RBPSUH; recombining binding protein suppressor of hairless
D 131891743 GON-4-like protein K23804 GON4L; GON-4-like protein
D 131887998 transcriptional activator protein Pur-alpha-like K21772 PURA; transcriptional activator protein Pur-alpha
D 131878879 myelin expression factor 2-like K24992 MYEF2; myelin expression factor 2
D 131889623 cell division cycle-associated protein 7-like K23408 CDCA7; cell division cycle-associated protein 7
D 131890515 NF-kappa-B-repressing factor-like K26458 NKRF; NF-kappa-B-repressing factor
D 131893671 protein ecdysoneless homolog K28083 ECD; protein ecdysoneless
D 131877886 dachshund homolog 1-like isoform X1 K28157 DACH; dachshund
#
AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
C DeoR family
C LacI family
C GntR family
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
C MerR family
C Fur family
C IclR family
C CRP/FNR family
C Rrf2 family
C ArsR family
C XRE family
C PadR family
C Other families
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: October 1, 2025
#
Classification taken and modified from TRANSFAC 7.0