+D GENES KO
#
KEGG Orthology (KO) - Treponema denticola
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tde00010]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_2573 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_1550 phosphofructokinase, pyrophosphate-dependent K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_1236 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TDE_1488 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TDE_1715 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TDE_1697 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TDE_0949 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TDE_2535 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TDE_0844 pyruvate phosphate dikinase, putative K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_1501 ppdK; pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_0665 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_2198 pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_0351 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TDE_1357 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tde00020]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_1520 hydro-lyase, tartrate/fumarate family, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D TDE_1521 hydro-lyase, tartrate/fumarate family, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D TDE_0665 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_2198 pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:tde00030]
D TDE_2573 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TDE_2597 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TDE_1308 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TDE_1641 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TDE_0352 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D TDE_0448 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_2723 prs; phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TDE_0157 KHG/KDPG family aldolase/carbohydrate kinase, PfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_1550 phosphofructokinase, pyrophosphate-dependent K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tde00040]
D TDE_2597 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TDE_0075 sorbitol dehydrogenase, putative K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:tde00051]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_1550 phosphofructokinase, pyrophosphate-dependent K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D TDE_0075 sorbitol dehydrogenase, putative K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_1236 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TDE_0352 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tde00052]
D TDE_1357 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TDE_0455 kinase, GHMP family K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_2212 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_2298 galactokinase, putative K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_1753 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_1453 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_0107 alpha-amylase family protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:tde00500]
D TDE_1882 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D TDE_2035 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TDE_1582 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D TDE_1094 conserved hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TDE_2411 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TDE_0107 alpha-amylase family protein K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D TDE_2387 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D TDE_0101 alpha-amylase family protein K01214 ISA; isoamylase [EC:3.2.1.68]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_2573 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tde00520]
D TDE_0024 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TDE_1221 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TDE_0337 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_0641 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TDE_0093 UDP-N-acetylenolpyruvoylglucosamine reductase, putative K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_0455 kinase, GHMP family K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_2212 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_2298 galactokinase, putative K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_1753 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TDE_2573 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TDE_2035 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tde00620]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TDE_0665 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_2198 pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_0933 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TDE_0042 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TDE_2535 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TDE_0589 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TDE_0592 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TDE_0591 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TDE_0590 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TDE_0797 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TDE_0351 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TDE_1367 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D TDE_1716 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D TDE_2446 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TDE_1520 hydro-lyase, tartrate/fumarate family, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D TDE_1521 hydro-lyase, tartrate/fumarate family, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D TDE_0844 pyruvate phosphate dikinase, putative K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_1501 ppdK; pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_2403 metallo-beta-lactamase family protein
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tde00630]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TDE_2236 glmE; methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D TDE_1023 mamA; methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D TDE_2235 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D TDE_1616 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TDE_2716 HAD-superfamily hydrolase, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TDE_2668 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TDE_1625 gcvP1; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TDE_1624 gcvP2; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TDE_1627 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_1626 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TDE_0208 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:tde00640]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TDE_0933 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TDE_0042 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_0589 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TDE_0592 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TDE_0591 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TDE_0590 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TDE_0351 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:tde00650]
D TDE_0610 3-hydroxyacyl-CoA dehydrogenase, putative K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TDE_0597 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D TDE_1915 alcohol dehydrogenase, iron-containing K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D TDE_0665 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_2198 pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00660 C5-Branched dibasic acid metabolism [PATH:tde00660]
D TDE_2235 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D TDE_2236 glmE; methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D TDE_1023 mamA; methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
C 00562 Inositol phosphate metabolism
D TDE_1236 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tde00190]
D TDE_1593 Fe-hydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D TDE_1683 atpA; V-type ATPase, A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D TDE_1682 atpB; V-type ATPase, B subunit K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D TDE_1681 atpD; V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D TDE_1381 atpE; V-type ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D TDE_1679 atpK; V-type ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tde00710]
D TDE_1715 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TDE_1488 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_1308 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TDE_1641 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TDE_0352 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D TDE_1236 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TDE_2597 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TDE_0844 pyruvate phosphate dikinase, putative K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_1501 ppdK; pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tde00720]
D TDE_0665 pyruvate ferredoxin/flavodoxin oxidoreductase family protein K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_2198 pyruvate-ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D TDE_0844 pyruvate phosphate dikinase, putative K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_1501 ppdK; pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D TDE_1520 hydro-lyase, tartrate/fumarate family, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D TDE_1521 hydro-lyase, tartrate/fumarate family, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D TDE_0589 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TDE_0592 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TDE_0591 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TDE_0590 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TDE_0019 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D TDE_0013 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TDE_0046 formiminotransferase-cyclodeaminase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D TDE_0042 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TDE_0933 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tde00680]
D TDE_2668 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TDE_1616 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TDE_0949 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_0933 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D TDE_0042 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TDE_1697 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:tde00910]
D TDE_0997 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TDE_0407 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TDE_2476 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D TDE_0479 hybrid cluster protein
C 00920 Sulfur metabolism
D TDE_1479 DHH superfamily protein, subfamily 1 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tde00061]
D TDE_0589 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TDE_0592 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TDE_0591 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TDE_0590 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TDE_1026 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D TDE_0601 malonyl CoA-acyl carrier protein transacylase, putative K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TDE_0602 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TDE_0038 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TDE_0598 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TDE_0823 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TDE_0597 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D TDE_0942 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1742 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2186 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tde00071]
D TDE_0942 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1742 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2186 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tde00561]
D TDE_0208 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TDE_2360 dihydroxyacetone kinase family protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D TDE_2359 DAK2 domain protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D TDE_1916 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TDE_1989 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TDE_2034 glycosyl transferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D TDE_1453 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tde00564]
D TDE_2090 glycerol-3-phosphate dehydrogenase, NAD-dependent, putative K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TDE_0134 oxidoreductase, FAD-dependent K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D TDE_2643 oxidoreductase, FAD-dependent K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D TDE_1989 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TDE_0799 glycerophosphoryl diester phosphodiesterase, putative K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D TDE_0957 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D TDE_2343 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TDE_1366 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TDE_2572 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TDE_2669 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
D TDE_0138 alkyldihydroxyacetonephosphate synthase, putative K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:tde00600]
D TDE_0471 BNR domain protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D TDE_1453 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tde00230]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_2723 prs; phosphoribosyl pyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TDE_2407 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TDE_1267 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TDE_1897 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TDE_1279 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D TDE_1405 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TDE_1266 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TDE_0687 phosphoribosylaminoimidazole carboxylase, PurE protein K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TDE_0686 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TDE_1499 adenylosuccinate lyase, putative K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TDE_1896 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TDE_1684 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D TDE_0463 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TDE_2665 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TDE_2271 HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TDE_0267 HAM1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TDE_1718 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TDE_0341 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TDE_0335 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TDE_1331 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D TDE_0411 adenylate/guanylate cyclase catalytic domain protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TDE_0932 adenylate/guanylate cyclase catalytic domain protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TDE_1986 adenylate cyclase, putative K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TDE_0870 phosphatase/nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D TDE_0965 conserved hypothetical protein TIGR00282 K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D TDE_1112 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TDE_2476 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:tde00240]
D TDE_0129 pyrBI; PyrBI protein K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D TDE_2107 dihydroorotase, putative K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TDE_0982 dihydroorotate dehydrogenase/oxidoreductase, FAD-binding K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D TDE_1001 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TDE_2110 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TDE_2085 amino acid kinase family protein K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TDE_2348 maf; maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TDE_2692 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TDE_1087 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TDE_2289 phosphoribulokinase/uridine kinase family protein K00876 udk; uridine kinase [EC:2.7.1.48]
D TDE_1612 phosphoribosyl transferase domain protein K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D TDE_0870 phosphatase/nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D TDE_0965 conserved hypothetical protein TIGR00282 K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D TDE_2191 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D TDE_1931 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D TDE_1331 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D TDE_0341 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TDE_0335 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TDE_2193 deoxycytidylate deaminase, putative K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D TDE_2599 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D TDE_1042 dut; deoxyuridine 5'triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TDE_0311 thymidylate synthase-complementing family protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tde00250]
D TDE_1993 aspartate ammonia-lyase, putative K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D TDE_1499 adenylosuccinate lyase, putative K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TDE_0129 pyrBI; PyrBI protein K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D TDE_0407 gltA; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TDE_0997 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TDE_1405 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TDE_2407 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tde00260]
D TDE_2192 threonine synthase, putative K01733 thrC; threonine synthase [EC:4.2.3.1]
D TDE_2676 threonine synthase, putative K01733 thrC; threonine synthase [EC:4.2.3.1]
D TDE_0005 ltaE; L-threonine aldolase, low-specificity K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D TDE_2668 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TDE_1616 hprA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TDE_0208 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TDE_1697 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TDE_2194 8-amino-7-oxononanoate synthase, putative K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D TDE_1625 gcvP1; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TDE_1624 gcvP2; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TDE_1627 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_1626 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TDE_0080 gbsA; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D TDE_1506 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D TDE_1507 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:tde00270]
D TDE_1669 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TDE_2410 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TDE_2470 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TDE_0105 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D TDE_0689 5-methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D TDE_1667 eIF-2B alpha/beta/delta-related uncharacterized protein K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D TDE_2200 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D TDE_0351 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TDE_1506 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D TDE_1507 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:tde00280]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_1000 3-hydroxyacid dehydrogenase family protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis [PATH:tde00300]
D TDE_0068 peptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D TDE_0825 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, putative K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TDE_1200 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tde00310]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_0069 conserved hypothetical protein TIGR00238 K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:tde00220]
D TDE_0929 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D TDE_0451 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D TDE_1405 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TDE_2476 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D TDE_0997 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
C 00330 Arginine and proline metabolism [PATH:tde00330]
D TDE_1109 decarboxylase, pyridoxal-dependent family K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TDE_0542 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D TDE_0808 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D TDE_2754 arcB; ornithine cyclodeaminase K01750 E4.3.1.12; ornithine cyclodeaminase [EC:4.3.1.12]
D TDE_2776 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:tde00340]
D TDE_0796 histidinol phosphate phosphatase HisJ family protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D TDE_0588 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D TDE_2606 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D TDE_0047 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D TDE_0296 formiminotransferase, putative K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
D TDE_1118 tpl; tyrosine phenol-lyase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism
D TDE_0610 3-hydroxyacyl-CoA dehydrogenase, putative K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TDE_2205 enoate reductase, putative K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:tde00380]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_0251 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tde00400]
D TDE_2569 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TDE_0104 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D TDE_1640 3-dehydroquinate dehydratase, type 1, putative/shikimate 5-dehydrogenase, putative K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D TDE_2447 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D TDE_1686 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D TDE_1132 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TDE_1502 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:tde00430]
D TDE_0042 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D TDE_0933 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:tde00440]
D TDE_1413 cytidylyltransferase/phosphoenolpyruvate phosphomutase, putative K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D TDE_1414 phosphonopyruvate decarboxylase, putative K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D TDE_1415 nucleotidyl transferase/aminotransferase, class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:tde00450]
D TDE_1669 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TDE_2410 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TDE_2200 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D TDE_2052 aminotransferase, class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D TDE_0743 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TDE_2461 selD; selenide, water dikinase (selenocysteine-containing) K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D TDE_2477 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D TDE_1063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tde00460]
D TDE_1882 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D TDE_2668 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tde00470]
D TDE_1095 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TDE_2385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TDE_1405 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TDE_1448 glutamate racemase, putative K01776 murI; glutamate racemase [EC:5.1.1.3]
D TDE_0370 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
C 00480 Glutathione metabolism [PATH:tde00480]
D TDE_0300 cytosol aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TDE_2228 aminoacyl-histidine dipeptidase, putative K01270 pepD; dipeptidase D [EC:3.4.13.-]
D TDE_1729 glutathione peroxidase (selenocysteine-containing) K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TDE_1109 decarboxylase, pyridoxal-dependent family K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tde00511]
D TDE_0471 BNR domain protein K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D TDE_0480 alpha-L-fucosidase family protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tde00542]
D TDE_2670 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tde00541]
D TDE_1753 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TDE_1440 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TDE_1441 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00550 Peptidoglycan biosynthesis [PATH:tde00550]
D TDE_0641 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TDE_0093 UDP-N-acetylenolpyruvoylglucosamine reductase, putative K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TDE_1085 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TDE_0370 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TDE_0825 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, putative K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TDE_2385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TDE_1200 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TDE_2344 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TDE_0172 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TDE_2249 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TDE_1974 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TDE_1741 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TDE_2143 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TDE_1352 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TDE_1314 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TDE_0979 penicillin binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TDE_2095 beta-lactamase, putative K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D TDE_0633 D-alanyl-D-alanine carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:tde00552]
D TDE_0172 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TDE_2670 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TDE_1876 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D TDE_2034 glycosyl transferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tde00543]
D TDE_2670 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tde00730]
D TDE_0103 aminotransferase, class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TDE_2568 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TDE_1910 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TDE_1449 yjeQ; GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TDE_2727 GTPase YjeQ, putative K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TDE_1112 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tde00740]
D TDE_0073 riboflavin biosynthesis protein RibF, putative K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TDE_1039 riboflavin biosynthesis protein, putative K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:tde00750]
D TDE_0693 thiD; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D TDE_2192 threonine synthase, putative K01733 thrC; threonine synthase [EC:4.2.3.1]
D TDE_2676 threonine synthase, putative K01733 thrC; threonine synthase [EC:4.2.3.1]
D TDE_0456 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tde00760]
D TDE_0174 nicotinate phosphoribosyltransferase, putative K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D TDE_0463 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TDE_1747 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TDE_1400 glutamine-dependent NAD+ synthetase, putative K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D TDE_1706 cinA; competence/damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D TDE_2277 transcriptional regulator, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D TDE_1591 inorganic polyphosphate/ATP-NAD kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D TDE_1188 pntB; NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:tde00770]
D TDE_0353 lipase/acylhydrolase, GDSL family K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D TDE_1375 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TDE_1638 dephospho-CoA kinase, putative K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TDE_1907 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:tde00780]
D TDE_0038 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TDE_0598 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TDE_0823 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TDE_0041 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tde00785]
D TDE_1575 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D TDE_1551 lipoyltransferase and lipoate-protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D TDE_2647 lipoyltransferase and lipoate-protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_1625 gcvP1; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TDE_1624 gcvP2; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TDE_1627 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TDE_1626 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tde00790]
D TDE_1084 folylpolyglutamate synthetase, putative K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:tde00670]
D TDE_0019 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D TDE_0013 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TDE_0046 formiminotransferase-cyclodeaminase family protein K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D TDE_2668 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TDE_1897 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TDE_1896 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TDE_0296 formiminotransferase, putative K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D TDE_1644 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TDE_1627 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TDE_0311 thymidylate synthase-complementing family protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D TDE_0992 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tde00860]
D TDE_0204 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TDE_2656 cbiK; cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D TDE_2657 precorrin-2 C20-methyltransferase, putative K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D TDE_0623 cobJ; precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D TDE_0614 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D TDE_0615 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D TDE_0624 precorrin-6X reductase, putative K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D TDE_1595 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D TDE_2374 precorrin-8W decarboxylase, putative K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D TDE_2373 precorrin-6Y C5,15-methyltransferase, putative K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D TDE_2555 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D TDE_2658 cobyrinic acid a,c-diamide synthase, putative K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D TDE_0749 cobalamin biosynthesis protein CobN, putative K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D TDE_0210 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TDE_2326 cobyric acid synthase CobQ, putative K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D TDE_2389 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D TDE_2382 cobU; cobinamide kinase/cobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D TDE_2383 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D TDE_0880 cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D TDE_2384 phosphoglycerate mutase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TDE_2687 L-threonine-O-3-phosphate decarboxylase, putative K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D TDE_0750 magnesium chelatase, subunit D/I family K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D TDE_0751 magnesium chelatase, subunit D/I family K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tde00900]
D TDE_1910 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TDE_2342 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TDE_2291 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TDE_1338 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TDE_2292 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TDE_1265 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TDE_1096 ispH; hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TDE_1537 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TDE_2344 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TDE_1308 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tde00523]
D TDE_1440 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TDE_1441 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D TDE_1441 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tde00946]
D TDE_1882 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tde00521]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_0864 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1998 phosphohexose mutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TDE_1440 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TDE_1441 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
C 00525 Acarbose and validamycin biosynthesis [PATH:tde00525]
D TDE_1440 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TDE_1441 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D TDE_0601 malonyl CoA-acyl carrier protein transacylase, putative K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TDE_0598 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:tde00998]
D TDE_1026 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D TDE_1413 cytidylyltransferase/phosphoenolpyruvate phosphomutase, putative K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D TDE_1414 phosphonopyruvate decarboxylase, putative K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tde00999]
D TDE_2470 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TDE_1640 3-dehydroquinate dehydratase, type 1, putative/shikimate 5-dehydrogenase, putative K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D TDE_1882 glycosyl hydrolase, family 1 K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D TDE_0610 3-hydroxyacyl-CoA dehydrogenase, putative K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00627 Aminobenzoate degradation
D TDE_0797 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tde00625]
D TDE_2512 aldehyde dehydrogenase (NADP) family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tde03020]
D TDE_2421 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TDE_2420 DNA-directed RNA polymerase, beta' subunit, putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TDE_0791 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TDE_0056 DNA-directed RNA polymerase, omega subunit, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D TDE_2721 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tde03010]
D TDE_2080 cytidylate kinase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TDE_2347 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TDE_0773 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TDE_1943 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TDE_0784 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TDE_1678 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TDE_1048 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TDE_0781 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TDE_0853 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TDE_0766 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TDE_0790 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TDE_1047 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TDE_0789 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TDE_0780 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TDE_1040 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TDE_0881 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TDE_0776 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TDE_1676 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TDE_0771 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TDE_1710 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TDE_2473 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TDE_2424 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TDE_0770 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TDE_0767 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TDE_0768 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D TDE_0779 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TDE_0782 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TDE_2422 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TDE_1675 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TDE_2423 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TDE_2425 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TDE_0852 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TDE_0777 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TDE_0786 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TDE_0774 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TDE_0792 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TDE_0783 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TDE_0885 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TDE_2154 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TDE_1751 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TDE_0772 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TDE_0769 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D TDE_0778 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TDE_1340 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D TDE_1749 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TDE_0991 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TDE_0775 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TDE_0785 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TDE_1504 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TDE_1025 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TDE_2428 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TDE_2400 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TDE_2155 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TDE_0788 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TDE_16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TDE_23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tde00970]
D TDE_tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TDE_tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TDE_tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TDE_tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TDE_tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TDE_tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TDE_tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TDE_tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TDE_tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TDE_tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TDE_tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TDE_tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TDE_tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D TDE_tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TDE_tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TDE_tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TDE_tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D TDE_tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D TDE_tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D TDE_tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TDE_tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TDE_tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TDE_tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TDE_tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TDE_tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TDE_tRNA-Pseudo-1 pseudogene K14233 tRNA-Ser; tRNA Ser
D TDE_tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TDE_tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TDE_tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TDE_tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TDE_tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TDE_tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D TDE_tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D TDE_tRNA-SeC_p_-1 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D TDE_0204 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TDE_0576 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TDE_0575 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TDE_0577 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TDE_1659 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TDE_1587 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TDE_0980 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TDE_0020 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TDE_1090 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TDE_2307 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TDE_2477 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D TDE_0092 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TDE_1063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TDE_1644 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TDE_1364 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TDE_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TDE_2663 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TDE_2553 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D TDE_0971 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TDE_2220 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TDE_1442 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TDE_0109 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TDE_1927 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TDE_0861 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TDE_1588 tryptophanyl-tRNA synthetase, putative K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tde03060]
D TDE_0787 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TDE_2427 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TDE_1238 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TDE_0681 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TDE_0680 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TDE_0682 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TDE_2396 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TDE_1898 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TDE_2089 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TDE_2043 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TDE_1313 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TDE_1465 signal peptidase I, putative K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TDE_2219 membrane protein, putative K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TDE_2615 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tde04122]
D TDE_0103 aminotransferase, class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TDE_0690 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TDE_2568 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tde03018]
D TDE_0949 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TDE_1041 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TDE_2109 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TDE_0326 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TDE_0435 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TDE_1503 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TDE_0237 HDIG domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_0628 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TDE_1175 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TDE_1726 polyA polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tde03030]
D TDE_1999 DNA polymerase III domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TDE_2786 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TDE_1971 DNA polymerase III domain protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_2586 DNA polymerase III, gamma and tau subunits, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_0729 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TDE_0231 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TDE_1662 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TDE_1345 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TDE_1677 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TDE_2570 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TDE_1547 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TDE_1637 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TDE_1538 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tde03410]
D TDE_2534 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TDE_2491 DNA polymerase domain protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TDE_1734 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TDE_1637 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TDE_2190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TDE_1538 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tde03420]
D TDE_1287 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TDE_1010 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TDE_1369 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TDE_2478 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TDE_0903 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TDE_2335 ATP-dependent DNA helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TDE_1637 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TDE_1538 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TDE_2721 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:tde03430]
D TDE_2603 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TDE_1450 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D TDE_0903 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TDE_2335 ATP-dependent DNA helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TDE_1017 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TDE_2066 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TDE_2190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TDE_1677 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TDE_2786 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TDE_0231 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TDE_1971 DNA polymerase III domain protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_2586 DNA polymerase III, gamma and tau subunits, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_0729 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TDE_1999 DNA polymerase III domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TDE_1538 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tde03440]
D TDE_2190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TDE_1677 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TDE_0230 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TDE_0436 recO; Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D TDE_1549 recR; recombination protein RecR K06187 recR; recombination protein RecR
D TDE_0872 recA; recA protein K03553 recA; recombination protein RecA
D TDE_1637 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TDE_1863 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TDE_1914 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TDE_1864 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TDE_2579 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TDE_2786 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TDE_0231 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TDE_1971 DNA polymerase III domain protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_2586 DNA polymerase III, gamma and tau subunits, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_0729 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TDE_1999 DNA polymerase III domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TDE_2490 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tde02010]
D TDE_0386 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D TDE_0186 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D TDE_0376 ABC transporter, permease protein, putative K02011 afuB; iron(III) transport system permease protein
D TDE_0183 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D TDE_0375 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TDE_0182 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TDE_0143 thiamine ABC transporter, thiamine-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D TDE_0144 thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D TDE_0145 thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D TDE_1950 membrane lipoprotein TmpC, putative K07335 bmpA; basic membrane protein A and related proteins
D TDE_1948 ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D TDE_1947 ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D TDE_1949 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D TDE_2217 mglB; galactose/glucose-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D TDE_2215 galactoside ABC transporter, permease protein, putative K10541 mglC; methyl-galactoside transport system permease protein
D TDE_2216 mglA; galactoside ABC transporter, ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D TDE_1356 lipoprotein, putative K02044 phnD; phosphonate transport system substrate-binding protein
D TDE_0926 phosphonate ABC transporter, permease protein, putative K02042 phnE; phosphonate transport system permease protein
D TDE_0927 phosphonate ABC transporter, permease protein, putative K02042 phnE; phosphonate transport system permease protein
D TDE_0928 phosphonate ABC transporter, ATP-binding protein, putative K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D TDE_2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D TDE_2366 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D TDE_2365 high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D TDE_2364 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D TDE_2363 high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D TDE_2049 bacterial extracellular solute-binding proteins, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TDE_0639 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D TDE_0638 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D TDE_0637 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D TDE_0636 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_1067 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_0985 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein, putative K13893 yejA; microcin C transport system substrate-binding protein
D TDE_0988 oligopeptide/dipeptide ABC transporter, peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D TDE_0984 oligopeptide/dipeptide ABC transporter, permease protein, putative K13895 yejE; microcin C transport system permease protein
D TDE_2226 ABC transporter, substrate-binding protein, putative K09815 znuA; zinc transport system substrate-binding protein
D TDE_2562 cation ABC transporter, permease protein, putative K09816 znuB; zinc transport system permease protein
D TDE_2561 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TDE_1226 troA; zinc ABC transporter, periplasmic zinc-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D TDE_1224 troC; zinc ABC transporter, permease protein K11708 troC; manganese/zinc/iron transport system permease protein
D TDE_1223 troD; zinc ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D TDE_1225 troB; zinc ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D TDE_2131 cobalamin biosynthesis protein CbiM, putative K02007 cbiM; cobalt/nickel transport system permease protein
D TDE_2133 cobalt transport protein, putative K02008 cbiQ; cobalt/nickel transport system permease protein
D TDE_2132 cobalt ABC transporter, ATP-binding protein, putative K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D TDE_2061 conserved hypothetical protein K10094 cbiK; nickel transport protein
D TDE_2058 conserved hypothetical protein K10094 cbiK; nickel transport protein
D TDE_2130 hypothetical protein K16915 cbiL; nickel transport protein
D TDE_1651 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D TDE_1649 hypothetical protein K16783 bioN; biotin transport system permease protein
D TDE_1650 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D TDE_2623 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0242 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0905 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_2157 ABC transporter, permease protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0283 transporter, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_1597 transporter, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0256 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0899 ABC transporter, permease protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_1604 ABC transporter, permease protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0951 lipoprotein, putative K23510 rfuA; riboflavin transport system substrate-binding protein
D TDE_0953 branched-chain amino acid ABC transporter, permease protein K23511 rfuC; riboflavin transport system permease protein
D TDE_0954 branched-chain amino acid ABC transporter, permease protein K23512 rfuD; riboflavin transport system permease protein
D TDE_0952 ABC transporter, ATP-binding protein K23513 rfuB; riboflavin transport system ATP-binding protein
D TDE_1416 ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D TDE_1417 ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D TDE_2039 lipoprotein releasing system, permease protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein
D TDE_2041 lipoprotein releasing system, permease protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein
D TDE_2040 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TDE_1043 membrane protein, putative K07091 lptF; lipopolysaccharide export system permease protein
D TDE_1044 membrane protein, putative K11720 lptG; lipopolysaccharide export system permease protein
D TDE_0644 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TDE_0658 ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D TDE_0657 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D TDE_0245 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0274 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0819 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0896 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0908 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0924 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_1600 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_2007 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_2626 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0244 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0273 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0818 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0897 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0916 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0923 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_1599 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_2008 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_2625 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0360 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TDE_0359 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TDE_0425 bacteriocin ABC transporter, ATP-binding/permease, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_0719 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_2431 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_2510 ABC transporter, ATP-binding/permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D TDE_0044 ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:tde02060]
D TDE_0084 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D TDE_1294 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TDE_0062 PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TDE_1079 DNA-binding protein/PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tde03070]
D TDE_1556 conserved domain protein K02453 gspD; general secretion pathway protein D
D TDE_0681 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TDE_0680 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TDE_2427 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TDE_1238 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TDE_0787 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TDE_0682 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TDE_2396 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TDE_1898 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TDE_2043 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TDE_2089 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tde02020]
D TDE_1004 flagellar filament core protein K02406 fliC; flagellin
D TDE_1475 flagellar filament core protein K02406 fliC; flagellin
D TDE_1477 flagellar filament core protein K02406 fliC; flagellin
D TDE_2683 fliA; RNA polymerase sigma-27 factor K02405 fliA; RNA polymerase sigma factor FliA
D TDE_2766 motA; motility protein A K02556 motA; chemotaxis protein MotA
D TDE_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TDE_0658 ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D TDE_0657 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D TDE_0656 sensor histidine kinase, putative K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D TDE_0655 response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D TDE_0633 D-alanyl-D-alanine carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D TDE_0492 sensor histidine kinase/response regulator K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D TDE_1522 citC; citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D TDE_1633 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D TDE_1632 citE; citrate lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D TDE_1631 citF; citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D TDE_1523 citXG protein, putative K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D TDE_2446 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D TDE_2700 citrate carrier protein, CCS family K11616 maeN; malate:Na+ symporter
D TDE_2355 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D TDE_2079 sigma-54 dependent transcriptional regulator, putative K02584 nifA; Nif-specific regulatory protein
D TDE_2404 RNA polymerase sigma-54 factor, putative K03092 rpoN; RNA polymerase sigma-54 factor
D TDE_0647 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TDE_0345 dmcB; methyl-accepting chemotaxis protein DmcB K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0346 prtB; protease PrtB K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0347 dmcA; methyl-accepting chemotaxis protein DmcA K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0072 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0169 methyl-accepting chemotaxis domain protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0178 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0181 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0484 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0619 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0640 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0850 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1009 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1054 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1284 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1386 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2142 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2496 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2549 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2783 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1492 cheW-1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TDE_1589 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D TDE_1491 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TDE_1494 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TDE_0648 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TDE_0201 conserved hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TDE_1109 decarboxylase, pyridoxal-dependent family K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tde02024]
D TDE_2569 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TDE_2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D TDE_2366 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D TDE_2365 high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D TDE_2364 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D TDE_2363 high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D TDE_0942 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1742 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2186 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2049 bacterial extracellular solute-binding proteins, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TDE_0639 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D TDE_0638 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D TDE_0637 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D TDE_0636 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_1067 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_0425 bacteriocin ABC transporter, ATP-binding/permease, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_0719 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_2431 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_0426 bacteriocin ABC transporter, bacteriocin-binding protein, putative K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D TDE_0720 bacteriocin ABC transporter, bacteriocin-binding protein, putative K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D TDE_2430 bacteriocin ABC transporter, bacteriocin-binding protein, putative K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D TDE_0398 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_1072 lipoprotein, putative K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_1273 oligopeptide/dipeptide ABC transporter, peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_2629 peptide ABC transporter, periplasmic peptide-binding protein, putative K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_2756 bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_0394 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_1070 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_1073 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_1275 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_2630 peptide ABC transporter, permease protein, putative K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_0395 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_1069 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_1074 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_1274 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_2631 peptide ABC transporter, permease protein, putative K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_0396 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_0986 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_1068 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_1075 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_1272 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_2632 peptide ABC transporter, ATP-binding protein, putative K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_0397 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_0987 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_1076 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_1271 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_2396 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TDE_2427 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TDE_1238 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TDE_0787 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TDE_0682 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TDE_1898 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TDE_2043 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TDE_2089 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tde02030]
D TDE_0345 dmcB; methyl-accepting chemotaxis protein DmcB K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0346 prtB; protease PrtB K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0347 dmcA; methyl-accepting chemotaxis protein DmcA K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0072 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0169 methyl-accepting chemotaxis domain protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0178 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0181 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0484 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0619 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0640 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0850 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1009 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1054 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1284 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1386 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2142 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2496 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2549 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2783 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2217 mglB; galactose/glucose-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D TDE_1491 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TDE_1492 cheW-1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TDE_1589 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D TDE_1494 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TDE_1493 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D TDE_0648 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TDE_0647 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TDE_1216 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TDE_1285 flagellar motor switch protein FliG, putative K02410 fliG; flagellar motor switch protein FliG
D TDE_2763 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TDE_2762 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D TDE_2766 motA; motility protein A K02556 motA; chemotaxis protein MotA
D TDE_2765 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tde02040]
D TDE_1214 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TDE_1215 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TDE_1216 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TDE_1285 flagellar motor switch protein FliG, putative K02410 fliG; flagellar motor switch protein FliG
D TDE_1217 flagellar assembly protein fliH, putative K02411 fliH; flagellar assembly protein FliH
D TDE_1218 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TDE_1219 flagellar protein FliJ, putative K02413 fliJ; flagellar protein FliJ
D TDE_2322 flagellar protein FliL-related protein K02415 fliL; flagellar protein FliL
D TDE_2764 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D TDE_2763 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TDE_2762 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D TDE_2761 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D TDE_2760 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TDE_0052 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TDE_0053 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TDE_0055 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TDE_0054 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TDE_1212 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TDE_1213 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TDE_2769 flgD; flagellar hook assembly scaffolding protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TDE_2768 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D TDE_1006 flgG-1; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D TDE_1007 flgG-2; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TDE_1008 flagellar protein, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D TDE_2352 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TDE_2353 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TDE_1004 flagellar filament core protein K02406 fliC; flagellin
D TDE_1475 flagellar filament core protein K02406 fliC; flagellin
D TDE_1477 flagellar filament core protein K02406 fliC; flagellin
D TDE_1472 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D TDE_0119 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D TDE_2766 motA; motility protein A K02556 motA; chemotaxis protein MotA
D TDE_2765 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
D TDE_0201 conserved hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D TDE_0070 RNA polymerase sigma-70 factor, region 2 family K03086 rpoD; RNA polymerase primary sigma factor
D TDE_0937 RNA polymerase sigma-70 factor family protein K03086 rpoD; RNA polymerase primary sigma factor
D TDE_1346 RNA polymerase sigma-70 factor family protein K03086 rpoD; RNA polymerase primary sigma factor
D TDE_2404 RNA polymerase sigma-54 factor, putative K03092 rpoN; RNA polymerase sigma-54 factor
D TDE_2683 fliA; RNA polymerase sigma-27 factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TDE_0949 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tde01501]
D TDE_0024 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TDE_1221 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TDE_2049 bacterial extracellular solute-binding proteins, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TDE_0639 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D TDE_0638 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D TDE_0637 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D TDE_0636 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_1067 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_1741 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TDE_1352 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TDE_1314 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tde01502]
D TDE_2385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TDE_1095 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TDE_1200 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TDE_2249 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TDE_1974 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TDE_0633 D-alanyl-D-alanine carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tde01503]
D TDE_1714 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tde01000]
C 01001 Protein kinases [BR:tde01001]
D TDE_0494 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TDE_0495 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TDE_0656 sensor histidine kinase, putative K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D TDE_0492 sensor histidine kinase/response regulator K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D TDE_1491 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tde01009]
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_2480 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:tde01002]
D TDE_2615 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TDE_0175 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D TDE_1718 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TDE_0444 glutamine amidotransferase class-I domain protein K07010 K07010; putative glutamine amidotransferase
D TDE_0425 bacteriocin ABC transporter, ATP-binding/permease, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_0719 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_2431 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_0941 NLP/P60 family protein K13695 nlpC; probable lipoprotein NlpC
D TDE_2407 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TDE_2500 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D TDE_2584 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D TDE_0275 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D TDE_1288 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D TDE_1871 membrane protein, putative K07052 K07052; CAAX protease family protein
D TDE_1873 membrane protein, putative K07052 K07052; CAAX protease family protein
D TDE_2639 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D TDE_0633 D-alanyl-D-alanine carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D TDE_1865 peptidase, M16 family K06972 PITRM1; presequence protease [EC:3.4.24.-]
D TDE_0300 cytosol aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TDE_0068 peptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D TDE_0450 peptidase, M20/M25/M40 family K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D TDE_0925 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D TDE_2228 aminoacyl-histidine dipeptidase, putative K01270 pepD; dipeptidase D [EC:3.4.13.-]
D TDE_1733 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TDE_1482 peptidase, M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TDE_2337 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D TDE_0470 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TDE_2439 conserved hypothetical protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D TDE_2341 membrane-associated zinc metalloprotease, putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TDE_1195 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D TDE_2140 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D TDE_0979 penicillin binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TDE_2095 beta-lactamase, putative K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D TDE_1672 clpP-1; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TDE_2388 clpP-2; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TDE_0670 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TDE_1313 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TDE_1465 signal peptidase I, putative K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TDE_2219 membrane protein, putative K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TDE_2776 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TDE_0306 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D TDE_0124 rhomboid family protein K07059 K07059; rhomboid family protein
D TDE_1210 hslV; heat shock protein HslVU, ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TDE_0071 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D TDE_2262 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D TDE_1293 TldD/PmbA family protein K03568 tldD; TldD protein
D TDE_2137 conserved hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D TDE_1333 hflC protein, putative K04087 hflC; modulator of FtsH protease HflC
D TDE_1332 hflK protein, putative K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tde01003]
D TDE_2034 glycosyl transferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D TDE_1582 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D TDE_2143 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TDE_1741 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TDE_1876 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D TDE_2670 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tde01005]
D TDE_2670 glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TDE_1439 epimerase/dehydratase, putative K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tde01011]
D TDE_0641 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TDE_0093 UDP-N-acetylenolpyruvoylglucosamine reductase, putative K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TDE_1085 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TDE_0370 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TDE_0825 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, putative K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TDE_2385 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TDE_1095 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TDE_1448 glutamate racemase, putative K01776 murI; glutamate racemase [EC:5.1.1.3]
D TDE_2249 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TDE_1974 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TDE_0172 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TDE_0342 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D TDE_1741 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TDE_2143 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TDE_1352 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TDE_1314 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TDE_0979 penicillin binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TDE_2095 beta-lactamase, putative K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D TDE_0633 D-alanyl-D-alanine carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D TDE_2280 transglycosylase, SLT family K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TDE_2149 transglycosylase, SLT family K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TDE_1543 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D TDE_2030 lipoprotein, RlpA family K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TDE_1714 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tde01004]
D TDE_0601 malonyl CoA-acyl carrier protein transacylase, putative K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TDE_0602 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TDE_0038 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TDE_0598 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TDE_0823 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TDE_0597 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D TDE_0040 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TDE_0942 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1742 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2186 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1989 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tde01006]
D TDE_1537 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TDE_2344 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TDE_0057 miaA-1; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TDE_1447 miaA-2; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:tde01007]
D TDE_2553 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D TDE_0204 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TDE_0861 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TDE_1588 tryptophanyl-tRNA synthetase, putative K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TDE_0092 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TDE_0971 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TDE_1063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TDE_2663 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TDE_1364 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TDE_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TDE_1587 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TDE_0980 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TDE_1442 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TDE_0020 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TDE_2307 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TDE_2220 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TDE_1090 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TDE_1659 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TDE_0109 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TDE_1927 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TDE_2194 8-amino-7-oxononanoate synthase, putative K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D TDE_1669 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TDE_2410 hemolysin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D TDE_1415 nucleotidyl transferase/aminotransferase, class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tde03000]
D TDE_0058 conserved domain protein K13653 K13653; AraC family transcriptional regulator
D TDE_1784 transcriptional activator, AraC family K13653 K13653; AraC family transcriptional regulator
D TDE_1382 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D TDE_1035 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D TDE_1858 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D TDE_1222 iron-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D TDE_0114 iron-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D TDE_0041 birA; birA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TDE_2309 sigma-54 dependent transcriptional regulator, putative K12146 hyfR; hydrogenase-4 transcriptional activator
D TDE_2079 sigma-54 dependent transcriptional regulator, putative K02584 nifA; Nif-specific regulatory protein
D TDE_1912 DNA-binding protein p25 K01926 rex; redox-sensing transcriptional repressor
D TDE_1115 DNA-binding protein, putative K07726 K07726; putative transcriptional regulator
D TDE_0606 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_1162 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_2187 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_2290 transcriptional regulator, putative K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D TDE_1330 conserved hypothetical protein TIGR00244 K07738 nrdR; transcriptional repressor NrdR
D TDE_1197 conserved hypothetical protein TIGR00242 K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tde03021]
D TDE_2721 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D TDE_0791 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TDE_2421 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TDE_2420 DNA-directed RNA polymerase, beta' subunit, putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TDE_0056 DNA-directed RNA polymerase, omega subunit, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TDE_0070 RNA polymerase sigma-70 factor, region 2 family K03086 rpoD; RNA polymerase primary sigma factor
D TDE_0937 RNA polymerase sigma-70 factor family protein K03086 rpoD; RNA polymerase primary sigma factor
D TDE_1346 RNA polymerase sigma-70 factor family protein K03086 rpoD; RNA polymerase primary sigma factor
D TDE_0091 RNA polymerase sigma-24 factor, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TDE_2320 RNA polymerase sigma-24 factor, putative K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TDE_2404 RNA polymerase sigma-54 factor, putative K03092 rpoN; RNA polymerase sigma-54 factor
D TDE_2683 fliA; RNA polymerase sigma-27 factor K02405 fliA; RNA polymerase sigma factor FliA
D TDE_1107 N utilization substance protein A, putative K02600 nusA; transcription termination/antitermination protein NusA
D TDE_1657 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D TDE_0713 transcription antitermination protein, NusG family K02601 nusG; transcription termination/antitermination protein NusG
D TDE_2426 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TDE_1123 sigma factor regulatory protein, putative K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D TDE_1122 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D TDE_1503 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tde03019]
D TDE_1027 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TDE_0237 HDIG domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TDE_2109 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TDE_0326 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TDE_0435 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TDE_0949 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TDE_1041 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TDE_1503 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TDE_0064 pfk; phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TDE_0628 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TDE_1175 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TDE_1726 polyA polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D TDE_2355 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:tde03011]
D TDE_2080 cytidylate kinase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TDE_2347 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TDE_0773 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TDE_1943 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TDE_0784 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TDE_1678 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TDE_1048 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TDE_0781 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TDE_0853 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TDE_0766 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TDE_0790 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TDE_1047 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TDE_0789 rpsM; ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TDE_0780 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TDE_1040 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TDE_0881 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TDE_0776 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TDE_1676 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TDE_0771 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TDE_1710 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TDE_2473 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TDE_2424 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TDE_0770 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TDE_0767 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TDE_0768 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D TDE_0779 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TDE_0782 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TDE_1675 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TDE_2423 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TDE_2425 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TDE_2422 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TDE_0852 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TDE_0777 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TDE_0786 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TDE_0774 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TDE_0792 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TDE_0783 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TDE_0885 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TDE_2154 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TDE_1751 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TDE_0772 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TDE_0769 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D TDE_0778 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TDE_1749 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TDE_0991 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TDE_0775 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TDE_0785 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TDE_1504 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TDE_1025 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TDE_2428 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TDE_2400 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TDE_2155 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TDE_0788 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TDE_1340 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D TDE_16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TDE_23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tde03009]
D TDE_1027 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TDE_1895 era; GTP-binding protein Era K03595 era; GTPase
D TDE_1748 GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D TDE_1107 N utilization substance protein A, putative K02600 nusA; transcription termination/antitermination protein NusA
D TDE_1657 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D TDE_0713 transcription antitermination protein, NusG family K02601 nusG; transcription termination/antitermination protein NusG
D TDE_2426 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TDE_0860 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D TDE_1080 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TDE_1877 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TDE_2720 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TDE_2513 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TDE_1198 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TDE_0200 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TDE_1443 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TDE_1968 ftsJ; cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D TDE_0292 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D TDE_1913 conserved hypothetical protein K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D TDE_2541 conserved domain protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D TDE_2074 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TDE_2619 RNA methyltransferase, TrmA family, putative K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TDE_0875 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D TDE_1387 RNA pseudouridylate synthase family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TDE_2576 RNA pseudouridylate synthase family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TDE_1082 ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TDE_1083 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TDE_2195 RNA pseudouridylate synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TDE_2713 RNA methyltransferase, TrmH family K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D TDE_0800 acetyltransferase, GNAT family K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D TDE_0883 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D TDE_2609 MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D TDE_2109 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TDE_1449 yjeQ; GTPase YjeQ K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TDE_2727 GTPase YjeQ, putative K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TDE_0083 engA; GTP-binding protein EngA K03977 engA; GTPase
D TDE_2750 GTP-binding protein HflX, truncation K03665 hflX; GTPase
D TDE_1462 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TDE_1105 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D TDE_1108 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D TDE_1745 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D TDE_1242 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D TDE_0305 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:tde03016]
D TDE_1951 metallo-beta-lactamase family protein K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D TDE_1033 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D TDE_0804 conserved hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D TDE_0204 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TDE_2220 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TDE_2663 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TDE_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TDE_1063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TDE_0971 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TDE_1587 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TDE_1659 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TDE_0980 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TDE_0020 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TDE_1090 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TDE_2307 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TDE_0092 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TDE_1364 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TDE_1442 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TDE_0109 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TDE_1927 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TDE_0861 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TDE_1588 tryptophanyl-tRNA synthetase, putative K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TDE_1130 methyltransferase, putative K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TDE_2275 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D TDE_1104 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TDE_0103 aminotransferase, class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TDE_1462 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TDE_0057 miaA-1; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TDE_1447 miaA-2; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TDE_2180 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TDE_0828 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TDE_2461 selD; selenide, water dikinase (selenocysteine-containing) K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D TDE_2399 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TDE_1371 RNB-like family protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D TDE_2553 lysS; lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D TDE_1576 miaB; tRNA-i(6)A37 modification enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TDE_1886 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D TDE_2084 RNA methyltransferase, TrmH family K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D TDE_0884 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TDE_2713 RNA methyltransferase, TrmH family K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D TDE_0050 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D TDE_0690 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TDE_2451 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TDE_2121 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D TDE_0438 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TDE_2568 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TDE_1341 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TDE_1468 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TDE_2504 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TDE_1469 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TDE_2248 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D TDE_1041 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TDE_2127 vapC protein, putative K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:tde03012]
D TDE_1106 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TDE_2156 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TDE_1403 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TDE_2346 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D TDE_0765 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D TDE_0285 fusA-1; translation elongation factor G K02355 fusA; elongation factor G
D TDE_0947 translation elongation factor G, putative K02355 fusA; elongation factor G
D TDE_1049 fusA-2; translation elongation factor G K02355 fusA; elongation factor G
D TDE_1963 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D TDE_2489 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TDE_2345 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D TDE_2488 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TDE_0643 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TDE_2087 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D TDE_0968 efp; translation elongation factor P K02356 efp; elongation factor P
D TDE_2282 tRNA synthetase, class II family protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
C 03110 Chaperones and folding catalysts [BR:tde03110]
D TDE_2124 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D TDE_2327 clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D TDE_2036 ATPase, AAA family K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D TDE_1673 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TDE_1211 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TDE_2480 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D TDE_0628 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TDE_1175 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TDE_0629 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TDE_2086 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D TDE_2554 chaperonin, 33 kDa family K04083 hslO; molecular chaperone Hsp33
D TDE_0627 grpE; co-chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D TDE_1029 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D TDE_0934 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D TDE_0470 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TDE_2166 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D TDE_2165 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D TDE_1925 peptidyl-prolyl cis-trans isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TDE_0238 trx; thioredoxin, selenocysteine-containing K03671 TXN; thioredoxin
D TDE_0744 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:tde04131]
D TDE_2469 hexokinase family protein K00844 HK; hexokinase [EC:2.7.1.1]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_1488 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TDE_1697 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TDE_2535 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TDE_2480 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:tde04121]
C 03051 Proteasome [BR:tde03051]
D TDE_2480 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tde03032]
D TDE_2570 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TDE_1709 DNA-binding protein, HU family K05788 ihfB; integration host factor subunit beta
D TDE_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TDE_1662 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TDE_1345 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TDE_1677 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TDE_2786 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TDE_0231 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TDE_0729 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TDE_1999 DNA polymerase III domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TDE_1971 DNA polymerase III domain protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_2586 DNA polymerase III, gamma and tau subunits, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_1547 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TDE_1637 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TDE_1538 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TDE_0295 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TDE_0002 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TDE_2118 topoisomerase IV, A subunit, putative K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TDE_2245 topoisomerase IV, B subunit, putative K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TDE_1208 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tde03036]
D TDE_1027 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_1709 DNA-binding protein, HU family K05788 ihfB; integration host factor subunit beta
D TDE_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TDE_1496 chromosome partition protein SmC, putative K03529 smc; chromosome segregation protein
D TDE_0873 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D TDE_0874 transcriptional regulator, putative K06024 scpB; segregation and condensation protein B
D TDE_1203 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TDE_1314 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TDE_0173 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TDE_1199 cell division protein FtsL, putative K03586 ftsL; cell division protein FtsL
D TDE_1202 cell division protein FtsQ, putative K03589 ftsQ; cell division protein FtsQ
D TDE_1201 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D TDE_1204 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TDE_2152 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D TDE_1714 N-acetylmuramoyl-L-alanine amidase, family 3 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TDE_1349 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TDE_1350 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D TDE_1351 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D TDE_1353 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D TDE_0607 ParA family ATPase K03496 parA; chromosome partitioning protein
D TDE_0606 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_1162 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_2187 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_2118 topoisomerase IV, A subunit, putative K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TDE_2245 topoisomerase IV, B subunit, putative K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TDE_0828 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TDE_2513 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TDE_1209 site-specific recombinase, phage integrase family K03733 xerC; integrase/recombinase XerC
D TDE_1205 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D TDE_0233 fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D TDE_2641 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D TDE_2574 conserved hypothetical protein TIGR00650 K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tde03400]
D TDE_0217 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TDE_2534 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TDE_2721 helicase domain protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D TDE_0299 mutT; mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TDE_1042 dut; deoxyuridine 5'triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TDE_2491 DNA polymerase domain protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TDE_1734 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TDE_2190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TDE_1538 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TDE_1637 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TDE_1010 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TDE_1369 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TDE_2478 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TDE_0903 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TDE_2335 ATP-dependent DNA helicase, UvrD/Rep family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TDE_2421 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TDE_2420 DNA-directed RNA polymerase, beta' subunit, putative K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TDE_0791 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TDE_0056 DNA-directed RNA polymerase, omega subunit, putative K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TDE_1287 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TDE_2603 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TDE_1450 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D TDE_1017 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TDE_2066 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TDE_2786 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TDE_0231 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TDE_0729 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TDE_1999 DNA polymerase III domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TDE_1971 DNA polymerase III domain protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_2586 DNA polymerase III, gamma and tau subunits, putative K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TDE_1677 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TDE_0872 recA; recA protein K03553 recA; recombination protein RecA
D TDE_1863 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TDE_1914 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TDE_1864 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TDE_2490 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TDE_0171 nuclease SbcCD, C subunit, putative K03546 sbcC; DNA repair protein SbcC/Rad50
D TDE_0170 nuclease SbcCD, D subunit, putative K03547 sbcD; DNA repair protein SbcD/Mre11
D TDE_2517 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TDE_0230 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TDE_2579 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TDE_0436 recO; Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D TDE_1549 recR; recombination protein RecR K06187 recR; recombination protein RecR
D TDE_1301 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D TDE_1312 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D TDE_0295 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TDE_0002 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TDE_1208 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TDE_1709 DNA-binding protein, HU family K05788 ihfB; integration host factor subunit beta
D TDE_0326 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TDE_0435 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TDE_0963 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D TDE_0854 recX; regulatory protein RecX K03565 recX; regulatory protein
D TDE_1990 ATP-dependent helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TDE_0341 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TDE_0335 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TDE_1479 DHH superfamily protein, subfamily 1 K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tde03029]
D TDE_1106 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TDE_2156 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TDE_2346 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D TDE_0765 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D TDE_0285 fusA-1; translation elongation factor G K02355 fusA; elongation factor G
D TDE_0947 translation elongation factor G, putative K02355 fusA; elongation factor G
D TDE_1049 fusA-2; translation elongation factor G K02355 fusA; elongation factor G
D TDE_1895 era; GTP-binding protein Era K03595 era; GTPase
D TDE_0861 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TDE_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TDE_1587 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TDE_0020 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TDE_0971 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TDE_0576 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TDE_0575 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TDE_0577 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TDE_1677 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TDE_2601 surface antigen, putative K07277 SAM50; outer membrane protein insertion porin family
D TDE_0628 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TDE_0627 grpE; co-chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D TDE_1175 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TDE_0934 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D TDE_0629 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TDE_2086 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D TDE_0103 aminotransferase, class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TDE_2396 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TDE_2480 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tde02000]
D TDE_0245 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0274 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0819 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0896 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0908 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0924 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_1600 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_2007 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_2626 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D TDE_0244 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0273 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0818 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0897 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0916 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0923 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_1599 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_2008 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_2625 ABC transporter, ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D TDE_0360 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TDE_0359 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TDE_0316 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_0028 ABC transporter, ATP-binding protein, HlyB family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_0029 ABC transporter, ATP-binding protein, HlyB family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_0184 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_0921 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_0922 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_1061 ABC transporter, ATP-binding/permease protein, HlyB family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_1062 ABC transporter, ATP-binding protein, HlyB family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2000 ABC transporter, ATP-binding/permease protein, HlyB family K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2264 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2511 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2522 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2524 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2552 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2558 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2559 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2781 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_2782 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TDE_0425 bacteriocin ABC transporter, ATP-binding/permease, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_0719 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_2431 bacteriocin ABC transporter, ATP-binding/permease protein, putative K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D TDE_2510 ABC transporter, ATP-binding/permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D TDE_0044 ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D TDE_0386 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D TDE_0186 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D TDE_0376 ABC transporter, permease protein, putative K02011 afuB; iron(III) transport system permease protein
D TDE_0183 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D TDE_0375 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TDE_0182 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TDE_0143 thiamine ABC transporter, thiamine-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D TDE_0144 thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D TDE_0145 thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D TDE_0212 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TDE_0211 ABC transporter, permease protein, cysTW family K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D TDE_2646 ABC transporter, ATP-binding protein, putative K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D TDE_2217 mglB; galactose/glucose-binding lipoprotein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D TDE_2215 galactoside ABC transporter, permease protein, putative K10541 mglC; methyl-galactoside transport system permease protein
D TDE_2216 mglA; galactoside ABC transporter, ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D TDE_1950 membrane lipoprotein TmpC, putative K07335 bmpA; basic membrane protein A and related proteins
D TDE_1948 ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D TDE_1947 ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D TDE_1949 ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D TDE_0951 lipoprotein, putative K23510 rfuA; riboflavin transport system substrate-binding protein
D TDE_0953 branched-chain amino acid ABC transporter, permease protein K23511 rfuC; riboflavin transport system permease protein
D TDE_0954 branched-chain amino acid ABC transporter, permease protein K23512 rfuD; riboflavin transport system permease protein
D TDE_0952 ABC transporter, ATP-binding protein K23513 rfuB; riboflavin transport system ATP-binding protein
D TDE_1283 extracellular solute-binding lipoprotein, putative K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TDE_2076 hypothetical protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D TDE_1356 lipoprotein, putative K02044 phnD; phosphonate transport system substrate-binding protein
D TDE_0926 phosphonate ABC transporter, permease protein, putative K02042 phnE; phosphonate transport system permease protein
D TDE_0927 phosphonate ABC transporter, permease protein, putative K02042 phnE; phosphonate transport system permease protein
D TDE_0928 phosphonate ABC transporter, ATP-binding protein, putative K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D TDE_2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D TDE_2366 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D TDE_2365 high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D TDE_2364 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D TDE_2363 high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D TDE_2091 amino acid ABC transporter, amino acid-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TDE_2092 amino acid ABC transporter, amino acid-binding protein, putative K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TDE_2049 bacterial extracellular solute-binding proteins, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D TDE_0639 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D TDE_0638 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D TDE_0637 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D TDE_0636 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_1067 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D TDE_0398 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_1072 lipoprotein, putative K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_1273 oligopeptide/dipeptide ABC transporter, peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_2629 peptide ABC transporter, periplasmic peptide-binding protein, putative K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_2756 bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TDE_0394 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_1070 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_1073 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_1275 oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_2630 peptide ABC transporter, permease protein, putative K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TDE_0395 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_1069 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_1074 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_1274 oligopeptide/dipeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_2631 peptide ABC transporter, permease protein, putative K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TDE_0396 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_0986 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_1068 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_1075 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_1272 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_2632 peptide ABC transporter, ATP-binding protein, putative K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TDE_0397 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_0987 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_1076 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_1271 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D TDE_0985 oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein, putative K13893 yejA; microcin C transport system substrate-binding protein
D TDE_0988 oligopeptide/dipeptide ABC transporter, peptide-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D TDE_0984 oligopeptide/dipeptide ABC transporter, permease protein, putative K13895 yejE; microcin C transport system permease protein
D TDE_1180 iron compound ABC transporter, periplasmic iron compound-binding protein K25113 htsA; heme transport system substrate-binding protein
D TDE_2356 iron compound ABC transporter, periplasmic iron compound-binding protein, putative K25113 htsA; heme transport system substrate-binding protein
D TDE_1179 iron compound ABC transporter, permease protein K25114 htsB; heme transport system permease protein
D TDE_2357 iron compound ABC transporter, permease protein K25114 htsB; heme transport system permease protein
D TDE_1178 iron compound ABC transporter, ATP-binding protein K25115 htsC; heme transport system ATP-binding protein [EC:7.6.2.5]
D TDE_0758 iron compound ABC transporter, periplasmic iron compound-binding protein, putative K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TDE_0757 iron compound ABC transporter, permease protein, putative K02015 ABC.FEV.P; iron complex transport system permease protein
D TDE_0625 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TDE_0756 iron compound ABC transporter, ATP-binding protein, putative K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TDE_1183 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TDE_0748 iron compound ABC transporter, periplasmic iron compound-binding protein, putative K25034 btuF; cobalamin transport system substrate-binding protein
D TDE_2234 iron compound ABC transporter, periplasmic iron compound-binding protein, putative K25034 btuF; cobalamin transport system substrate-binding protein
D TDE_0747 iron compound ABC transporter, permease protein, putative K25027 btuC; cobalamin transport system permease protein
D TDE_2233 iron compound ABC transporter, permease protein, putative K25027 btuC; cobalamin transport system permease protein
D TDE_0746 iron compound ABC transporter, ATP-binding protein, putative K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D TDE_2232 iron compound ABC transporter, ATP-binding protein, putative K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D TDE_2226 ABC transporter, substrate-binding protein, putative K09815 znuA; zinc transport system substrate-binding protein
D TDE_2562 cation ABC transporter, permease protein, putative K09816 znuB; zinc transport system permease protein
D TDE_2561 ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TDE_1226 troA; zinc ABC transporter, periplasmic zinc-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D TDE_1224 troC; zinc ABC transporter, permease protein K11708 troC; manganese/zinc/iron transport system permease protein
D TDE_1223 troD; zinc ABC transporter, permease protein K11709 troD; manganese/zinc/iron transport system permease protein
D TDE_1225 troB; zinc ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D TDE_2133 cobalt transport protein, putative K02008 cbiQ; cobalt/nickel transport system permease protein
D TDE_2131 cobalamin biosynthesis protein CbiM, putative K02007 cbiM; cobalt/nickel transport system permease protein
D TDE_2132 cobalt ABC transporter, ATP-binding protein, putative K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D TDE_2061 conserved hypothetical protein K10094 cbiK; nickel transport protein
D TDE_2058 conserved hypothetical protein K10094 cbiK; nickel transport protein
D TDE_2130 hypothetical protein K16915 cbiL; nickel transport protein
D TDE_1651 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D TDE_1649 hypothetical protein K16783 bioN; biotin transport system permease protein
D TDE_1650 ABC transporter, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D TDE_0241 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_0257 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_0284 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_1605 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_0898 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_0907 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_1596 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_2159 membrane protein, putative K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_2624 conserved hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D TDE_2623 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0242 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0905 membrane protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_2157 ABC transporter, permease protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0283 transporter, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_1597 transporter, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0256 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0899 ABC transporter, permease protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_1604 ABC transporter, permease protein, putative K16785 ecfT; energy-coupling factor transport system permease protein
D TDE_0243 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_0255 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_0282 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_0900 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_0906 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_1598 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_1603 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_2158 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_2622 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D TDE_1416 ABC transporter, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D TDE_1417 ABC transporter, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D TDE_1043 membrane protein, putative K07091 lptF; lipopolysaccharide export system permease protein
D TDE_1044 membrane protein, putative K11720 lptG; lipopolysaccharide export system permease protein
D TDE_0644 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TDE_2113 membrane protein, putative K25151 gldF; gliding motility-associated transport system permease protein
D TDE_2114 ABC transporter, ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D TDE_2112 conserved hypothetical protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D TDE_0696 membrane protein, putative K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D TDE_2380 membrane protein, putative K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D TDE_0695 membrane protein, putative K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D TDE_2379 membrane protein, putative K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D TDE_0694 ABC transporter, ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D TDE_2378 ABC transporter, ATP-binding protein, putative K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D TDE_0658 ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D TDE_0657 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D TDE_2039 lipoprotein releasing system, permease protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein
D TDE_2041 lipoprotein releasing system, permease protein, putative K09808 lolC_E; lipoprotein-releasing system permease protein
D TDE_2040 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TDE_0485 membrane protein, putative K25154 evrC; viologen exporter family transport system permease protein
D TDE_0892 ABC transporter, permease protein K25154 evrC; viologen exporter family transport system permease protein
D TDE_2653 membrane protein, putative K25154 evrC; viologen exporter family transport system permease protein
D TDE_0486 membrane protein, putative K25155 evrB; viologen exporter family transport system permease protein
D TDE_0894 membrane protein, putative K25155 evrB; viologen exporter family transport system permease protein
D TDE_2652 membrane protein, putative K25155 evrB; viologen exporter family transport system permease protein
D TDE_0487 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D TDE_0893 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D TDE_2651 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D TDE_0701 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D TDE_1688 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D TDE_1903 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D TDE_0167 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TDE_0702 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TDE_1689 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TDE_1901 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TDE_2649 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TDE_1514 permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TDE_1515 permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TDE_1518 permease, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D TDE_1850 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D TDE_2283 permease, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D TDE_0535 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TDE_1509 lipoprotein releasing system, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TDE_1516 ABC transporter, ATP-binding protein, putative K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TDE_1852 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TDE_0666 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D TDE_0811 efflux protein, putative K26937 dinF; MATE family, multidrug efflux pump
D TDE_0293 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_0621 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_0931 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_1055 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_0350 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_0333 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_2475 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_2710 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D TDE_0084 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D TDE_1294 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TDE_0062 PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TDE_1079 DNA-binding protein/PTS system, IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TDE_2438 conserved hypothetical protein K10716 kch; voltage-gated potassium channel
D TDE_1250 batA protein, putative K07114 yfbK; Ca-activated chloride channel homolog
D TDE_1251 batB protein, putative K07114 yfbK; Ca-activated chloride channel homolog
D TDE_0999 formate/nitrite transporter K21993 fdhC; formate transporter
D TDE_2323 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D TDE_2718 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D TDE_2766 motA; motility protein A K02556 motA; chemotaxis protein MotA
D TDE_2765 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
D TDE_1034 magnesium and cobalt transporter, putative K03284 corA; magnesium transporter
D TDE_0321 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TDE_0320 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TDE_2601 surface antigen, putative K07277 SAM50; outer membrane protein insertion porin family
D TDE_0645 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D TDE_1243 tlyC; hemolysin C K06189 corC; hemolysin (HlyC) family protein
D TDE_2706 membrane protein, putative K16210 togT; oligogalacturonide transporter
D TDE_2739 membrane protein, putative K08978 TC.BAT1; bacterial/archaeal transporter family protein
D TDE_2204 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D TDE_0207 permease, GntP family K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D TDE_0361 transporter, putative K03312 gltS; glutamate:Na+ symporter, ESS family
D TDE_1965 sodium/hydrogen exchanger family protein K26730 napA; Na+:H+ antiporter
D TDE_0312 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D TDE_0088 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D TDE_0313 TrkA domain protein K03499 trkA; trk/ktr system potassium uptake protein
D TDE_0087 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D TDE_0294 TrkA domain protein K03499 trkA; trk/ktr system potassium uptake protein
D TDE_2251 uraA; uracil permease K02824 uraA; uracil permease
D TDE_1360 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D TDE_2179 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family
D TDE_1743 chromate transport protein K07240 chrA; chromate transporter
D TDE_1744 chromate transport protein K07240 chrA; chromate transporter
D TDE_1964 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D TDE_0342 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D TDE_0849 membrane protein, putative K09125 yhhQ; queuosine precursor transporter
D TDE_1201 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D TDE_1510 membrane protein, putative K07243 FTR; high-affinity iron transporter
D TDE_1511 pathogen-specific surface antigen, putative K07230 p19; periplasmic iron binding protein
D TDE_0116 membrane protein, putative K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D TDE_0426 bacteriocin ABC transporter, bacteriocin-binding protein, putative K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D TDE_0720 bacteriocin ABC transporter, bacteriocin-binding protein, putative K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D TDE_2430 bacteriocin ABC transporter, bacteriocin-binding protein, putative K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D TDE_2064 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D TDE_2065 FeoA family protein K04758 feoA; ferrous iron transport protein A
D TDE_2063 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D TDE_0863 MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:tde02044]
D TDE_1556 conserved domain protein K02453 gspD; general secretion pathway protein D
D TDE_2785 membrane protein, putative K02221 yggT; YggT family protein
D TDE_2193 deoxycytidylate deaminase, putative K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D TDE_1406 hypothetical protein K02241 comFB; competence protein ComFB
D TDE_0055 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TDE_0054 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TDE_2301 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein
D TDE_1215 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TDE_1217 flagellar assembly protein fliH, putative K02411 fliH; flagellar assembly protein FliH
D TDE_1218 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TDE_2762 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D TDE_2761 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D TDE_2760 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TDE_0052 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TDE_0053 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TDE_1898 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TDE_0681 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TDE_2427 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TDE_0680 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TDE_1238 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TDE_0787 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TDE_2089 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TDE_2043 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TDE_0682 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TDE_2396 inner membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tde02042]
D TDE_0321 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TDE_0320 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TDE_2317 hlyIII; hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tde02022]
D TDE_0656 sensor histidine kinase, putative K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D TDE_0655 response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D TDE_0492 sensor histidine kinase/response regulator K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D TDE_1491 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TDE_1494 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TDE_0648 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:tde02035]
D TDE_1491 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TDE_1492 cheW-1; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TDE_1589 cheW-2; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D TDE_1493 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D TDE_0647 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TDE_0648 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TDE_1494 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TDE_0345 dmcB; methyl-accepting chemotaxis protein DmcB K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0346 prtB; protease PrtB K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0347 dmcA; methyl-accepting chemotaxis protein DmcA K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0072 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0169 methyl-accepting chemotaxis domain protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0178 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0181 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0484 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0619 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0640 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_0850 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1009 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1054 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1284 methyl-accepting chemotaxis protein, putative K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1386 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2142 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2270 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2496 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2549 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_2783 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D TDE_1217 flagellar assembly protein fliH, putative K02411 fliH; flagellar assembly protein FliH
D TDE_1218 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TDE_1219 flagellar protein FliJ, putative K02413 fliJ; flagellar protein FliJ
D TDE_2761 conserved hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D TDE_2760 fliP; flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TDE_0052 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TDE_0053 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TDE_0055 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TDE_0054 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TDE_1216 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TDE_1285 flagellar motor switch protein FliG, putative K02410 fliG; flagellar motor switch protein FliG
D TDE_2763 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TDE_2762 fliY; flagellar motor switch protein FliY K02417 fliN; flagellar motor switch protein FliN
D TDE_1215 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TDE_2322 flagellar protein FliL-related protein K02415 fliL; flagellar protein FliL
D TDE_2764 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D TDE_1214 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TDE_1212 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TDE_1213 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TDE_2769 flgD; flagellar hook assembly scaffolding protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TDE_1006 flgG-1; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D TDE_1007 flgG-2; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TDE_1008 flagellar protein, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D TDE_2768 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D TDE_2352 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TDE_2353 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TDE_1004 flagellar filament core protein K02406 fliC; flagellin
D TDE_1475 flagellar filament core protein K02406 fliC; flagellin
D TDE_1477 flagellar filament core protein K02406 fliC; flagellin
D TDE_1472 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D TDE_0119 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D TDE_2683 fliA; RNA polymerase sigma-27 factor K02405 fliA; RNA polymerase sigma factor FliA
D TDE_2766 motA; motility protein A K02556 motA; chemotaxis protein MotA
D TDE_2765 motB; flagellar motor rotation protein B K02557 motB; chemotaxis protein MotB
D TDE_2354 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D TDE_0201 conserved hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D TDE_1473 flagellin FlaG, putative K06603 flaG; flagellar protein FlaG
D TDE_1334 conserved hypothetical protein K02383 flbB; flagellar protein FlbB
D TDE_2767 flagellar protein-related protein K02385 flbD; flagellar protein FlbD
D TDE_2686 flhF; flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D TDE_1397 flagellar synthesis regulator FleN, putative K04562 flhG; flagellar biosynthesis protein FlhG
D TDE_2685 fleN; flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tde04812]
D TDE_2539 conserved domain protein K06990 MEMO1; MEMO1 family protein
D TDE_1349 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TDE_1204 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TDE_1203 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TDE_0607 ParA family ATPase K03496 parA; chromosome partitioning protein
D TDE_0606 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_1162 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TDE_2187 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tde04147]
D TDE_2480 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D TDE_0340 fructose-bisphosphate aldolase, class-I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TDE_0949 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TDE_1488 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TDE_1715 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TDE_2535 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TDE_0011 alkyl hydroperoxide reductase/peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D TDE_1175 groEL; chaperonin, 60 kDa K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TDE_0628 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TDE_2573 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TDE_2665 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TDE_0765 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D TDE_0351 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D TDE_0942 long-chain-fatty-acid--CoA ligase, putative K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1742 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_2186 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TDE_1112 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TDE_1684 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D TDE_0480 alpha-L-fucosidase family protein K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D TDE_0455 kinase, GHMP family K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_2212 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_2298 galactokinase, putative K00849 galK; galactokinase [EC:2.7.1.6]
D TDE_1916 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TDE_1896 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TDE_1629 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TDE_0997 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TDE_1236 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TDE_1697 gpm; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:tde02048]
D TDE_0329 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D TDE_2047 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D TDE_0327 CRISPR-associated protein, SAG0894 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D TDE_0330 CRISPR-associated protein, SAG0897 family K19137 csn2; CRISPR-associated protein Csn2
D TDE_0366 hsdR-1; type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TDE_2747 hsdR-2; type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TDE_0368 type I restriction-modification system, S subunit, putative K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TDE_2740 type I restriction-modification system, S subunit, truncation K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TDE_2743 type I restriction-modification system, S subunit, truncation K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TDE_2744 hsdS; type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TDE_0369 hsdM-1; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TDE_2746 hsdM-2; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TDE_0706 adenine-specific DNA modification methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D TDE_0099 adenine-specific DNA modification methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D TDE_2247 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D TDE_2564 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D TDE_2246 conserved hypothetical protein K07172 mazE; antitoxin MazE
D TDE_0735 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D TDE_1978 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D TDE_0303 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D TDE_0505 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D TDE_0302 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D TDE_0506 DNA-damage-inducible protein J, putative K07473 dinJ; DNA-damage-inducible protein J
D TDE_0663 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D TDE_0738 conserved hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D TDE_1573 DNA-damage-inducible protein J, putative K07473 dinJ; DNA-damage-inducible protein J
D TDE_0662 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D TDE_0737 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D TDE_0494 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TDE_0495 conserved hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D TDE_1610 DNA-binding protein K21498 higA-1; antitoxin HigA-1
D TDE_2127 vapC protein, putative K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TDE_1204 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TDE_1349 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TDE_2118 topoisomerase IV, A subunit, putative K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TDE_2245 topoisomerase IV, B subunit, putative K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TDE_0204 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TDE_0103 aminotransferase, class-V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:tde04090]
C 01504 Antimicrobial resistance genes [BR:tde01504]
D TDE_0044 ABC transporter, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D TDE_0633 D-alanyl-D-alanine carboxypeptidase, putative K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tde03100]
D TDE_tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TDE_tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TDE_tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TDE_tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TDE_tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TDE_tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TDE_tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TDE_tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TDE_tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TDE_tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TDE_tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TDE_tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TDE_tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TDE_tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D TDE_tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TDE_tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TDE_tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TDE_tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TDE_tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D TDE_tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D TDE_tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D TDE_tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TDE_tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TDE_tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TDE_tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TDE_tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TDE_tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TDE_tRNA-Pseudo-1 pseudogene K14233 tRNA-Ser; tRNA Ser
D TDE_tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TDE_tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TDE_tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TDE_tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TDE_tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TDE_tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D TDE_tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D TDE_tRNA-SeC_p_-1 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D TDE_16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TDE_23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TDE_0727 iron-sulfur cluster-binding protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D TDE_0709 msrA; peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D TDE_1754 desulfoferrodoxin/neelaredoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D TDE_0449 ferritin, putative K02217 ftnA; ferritin [EC:1.16.3.2]
D TDE_0408 oxidoreductase, NAD-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TDE_0745 grdA; glycine reductase complex selenoprotein GrdA K10670 grdA; glycine/sarcosine/betaine reductase complex component A [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D TDE_2120 grdE-2; glycine reductase complex proprotein GrdE2 K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D TDE_0078 grdB-1; glycine reductase complex selenoprotein GrdB1 K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D TDE_2119 grdB-2; glycine reductase complex selenoprotein GrdB2 K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D TDE_0239 grdD; glycine reductase complex protein GrdD K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D TDE_0240 grdC; glycine reductase complex protein GrdC K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D TDE_1856 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TDE_2402 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TDE_2506 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D TDE_0938 conserved hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D TDE_1708 cutE-1; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TDE_2299 cutE-2; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TDE_2125 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D TDE_0030 prolipoprotein diacylglyceryl transferase, putative K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TDE_1399 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TDE_2614 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TDE_1909 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D TDE_0121 conserved domain protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D TDE_0349 phosphoenolpyruvate synthase, putative K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D TDE_2037 ATP:guanido phosphotransferase domain protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D TDE_0187 carboxylesterase, putative K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D TDE_0232 appr-1-p processing enzyme domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D TDE_0521 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D TDE_2225 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TDE_2618 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D TDE_1241 HD domain protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D TDE_0966 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TDE_2029 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TDE_2730 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TDE_1645 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TDE_2069 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D TDE_0319 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TDE_0582 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TDE_1370 YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TDE_2287 peptidyl-prolyl cis-trans isomerase, FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D TDE_2391 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D TDE_0837 nqrB; Na(+)-translocating NADH-quinone reductase, B subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D TDE_0838 nqrA; Na(+)-translocating NADH-quinone reductase, A subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D TDE_1894 iron-sulfur cluster-binding protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D TDE_1384 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D TDE_0836 nqrC; Na(+)-translocating NADH-quinone reductase, C subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D TDE_0835 nqrD; Na(+)-translocating NADH-quinone reductase, D subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D TDE_0834 nqrE; Na(+)-translocating NADH-quinone reductase, E subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D TDE_2053 NifU domain protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D TDE_2371 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TDE_2315 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D TDE_2328 mtrF; efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TDE_1012 tex protein, putative K06959 tex; protein Tex
C 99974 Translation
D TDE_1444 metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D TDE_2123 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D TDE_2038 UVR domain protein K19411 mcsA; protein arginine kinase activator
D TDE_1671 tig; trigger factor K03545 tig; trigger factor
D TDE_1464 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D TDE_1995 magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
D TDE_1727 conserved hypothetical protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D TDE_0973 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D TDE_1621 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D TDE_2303 conserved hypothetical protein K07460 yraN; putative endonuclease
D TDE_1207 DNA processing protein DprA, putative K04096 smf; DNA processing protein
D TDE_1158 phage terminase, small subunit, putative K07474 xtmA; phage terminase small subunit
D TDE_0016 ATPase, AAA family K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
D TDE_1548 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TDE_0074 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TDE_1668 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TDE_1261 choline/carnitine/betaine transporter family protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D TDE_0250 sodium-dependent transporter, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D TDE_1259 amino acid carrier family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D TDE_1889 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D TDE_2395 Jag protein, putative K06346 jag; spoIIIJ-associated protein
D TDE_1339 stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D TDE_1240 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D TDE_2243 CutC family protein K06201 cutC; copper homeostasis protein
D TDE_1013 hemerythrin-related protein K07216 hr; hemerythrin
D TDE_1302 hemerythrin family protein K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TDE_1973 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D TDE_0958 patatin family protein K07001 K07001; NTE family protein
D TDE_2294 hydrolase, haloacid dehalogenase-like family K07025 K07025; putative hydrolase of the HAD superfamily
D TDE_0667 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D TDE_0668 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D TDE_0150 ribonuclease BN-like family protein K07058 K07058; membrane protein
D TDE_0955 LemA family protein K03744 lemA; LemA protein
D TDE_2333 sanA protein, putative K03748 sanA; SanA protein
D TDE_2250 membrane protein, putative K08974 K08974; putative membrane protein
D TDE_0583 conserved hypothetical protein K08986 ycgQ; putative membrane protein
D TDE_2528 conserved hypothetical protein K08988 K08988; putative membrane protein
C 99997 Function unknown
D TDE_2450 ankyrin repeat protein K06867 K06867; uncharacterized protein
D TDE_2693 ankyrin repeat protein K06867 K06867; uncharacterized protein
D TDE_0956 conserved hypothetical protein K06872 K06872; uncharacterized protein
D TDE_2483 conserved hypothetical protein K06872 K06872; uncharacterized protein
D TDE_2527 conserved hypothetical protein K06872 K06872; uncharacterized protein
D TDE_0358 cinI; cinnamoyl ester hydrolase K06889 K06889; uncharacterized protein
D TDE_0192 conserved hypothetical protein K06889 K06889; uncharacterized protein
D TDE_0877 conserved hypothetical protein K06889 K06889; uncharacterized protein
D TDE_2620 conserved hypothetical protein K06889 K06889; uncharacterized protein
D TDE_0847 conserved hypothetical protein K06940 K06940; uncharacterized protein
D TDE_1540 conserved hypothetical protein K06940 K06940; uncharacterized protein
D TDE_1760 HD domain protein K06950 K06950; uncharacterized protein
D TDE_0130 sodium/dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D TDE_0882 conserved hypothetical protein K06960 K06960; uncharacterized protein
D TDE_2163 conserved hypothetical protein K06973 K06973; uncharacterized protein
D TDE_0023 acetyltransferase, GNAT family K06976 K06976; uncharacterized protein
D TDE_0469 membrane protein, putative K07003 K07003; uncharacterized protein
D TDE_2006 membrane protein, putative K07003 K07003; uncharacterized protein
D TDE_2704 membrane protein, putative K07003 K07003; uncharacterized protein
D TDE_2417 nitroimidazole resistance protein, putative K07005 K07005; uncharacterized protein
D TDE_0650 membrane protein, putative K07035 K07035; uncharacterized protein
D TDE_1961 PIN domain protein K07065 K07065; uncharacterized protein
D TDE_1854 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D TDE_2757 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D TDE_0584 permease, putative K07089 K07089; uncharacterized protein
D TDE_0189 membrane protein, putative K07090 K07090; uncharacterized protein
D TDE_1578 phosphoesterase, putative K07095 K07095; uncharacterized protein
D TDE_2514 serine/threonine protein phosphatase family protein K07096 K07096; uncharacterized protein
D TDE_1545 phosphoribosyl transferase domain protein K07101 K07101; uncharacterized protein
D TDE_0151 integral membrane protein, YeeE/YedE family K07112 K07112; uncharacterized protein
D TDE_2467 conserved domain protein K07112 K07112; uncharacterized protein
D TDE_0802 conserved hypothetical protein K07118 K07118; uncharacterized protein
D TDE_1171 conserved hypothetical protein K07126 K07126; uncharacterized protein
D TDE_1402 conserved hypothetical protein K07133 K07133; uncharacterized protein
D TDE_1347 conserved hypothetical protein K07164 K07164; uncharacterized protein
D TDE_2398 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D TDE_0065 conserved hypothetical protein K09005 K09005; uncharacterized protein
D TDE_2682 conserved hypothetical protein K09749 K09749; uncharacterized protein
D TDE_2274 conserved hypothetical protein K09766 K09766; uncharacterized protein
D TDE_2151 conserved hypothetical protein K09768 K09768; uncharacterized protein
D TDE_0112 conserved hypothetical protein K09770 K09770; uncharacterized protein
D TDE_1388 conserved hypothetical protein K09775 K09775; uncharacterized protein
D TDE_1045 conserved hypothetical protein K09790 K09790; uncharacterized protein
D TDE_1336 conserved hypothetical protein K09795 K09795; uncharacterized protein
D TDE_1796 conserved hypothetical protein K09797 K09797; uncharacterized protein
D TDE_1832 conserved hypothetical protein K09797 K09797; uncharacterized protein
D TDE_2503 conserved domain protein K09798 K09798; uncharacterized protein
D TDE_1635 conserved hypothetical protein K09803 K09803; uncharacterized protein
D TDE_1807 conserved hypothetical protein K09803 K09803; uncharacterized protein
D TDE_2051 conserved hypothetical protein K09803 K09803; uncharacterized protein
D TDE_2106 conserved hypothetical protein K09803 K09803; uncharacterized protein
D TDE_1623 conserved hypothetical protein K09805 K09805; uncharacterized protein
D TDE_1584 lipoprotein, putative K09807 K09807; uncharacterized protein
D TDE_0826 conserved hypothetical protein K09946 K09946; uncharacterized protein
D TDE_0939 lipoprotein, putative K09973 K09973; uncharacterized protein
D TDE_2675 conserved hypothetical protein K01163 K01163; uncharacterized protein
D TDE_1750 conserved hypothetical protein K07584 ysxB; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 11, 2024