+D GENES KO
#
KEGG Orthology (KO) - Thermosipho ferrireducens
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tfe00010]
D JYK00_05960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JYK00_06700 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_06740 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D JYK00_09600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_03635 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_01920 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JYK00_05725 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JYK00_07000 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JYK00_07005 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JYK00_06635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JYK00_06135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JYK00_03960 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JYK00_06180 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D JYK00_08745 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_09570 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_07745 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_08740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_00545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_05430 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:tfe00020]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_08745 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_09570 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_07745 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_08740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_07750 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D JYK00_08735 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D JYK00_08750 ferredoxin family protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D JYK00_09575 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D JYK00_01695 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JYK00_01700 succinyl-CoA synthetase K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JYK00_05430 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:tfe00030]
D JYK00_06700 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JYK00_08415 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JYK00_07770 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JYK00_07990 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JYK00_01395 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JYK00_05010 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JYK00_05955 carbohydrate kinase family protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D JYK00_06810 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_06165 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JYK00_01155 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JYK00_05725 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JYK00_01920 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_06740 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D JYK00_09600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_03635 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tfe00040]
D JYK00_02880 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JYK00_08415 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JYK00_04800 Gfo/Idh/MocA family oxidoreductase K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
D JYK00_00925 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:tfe00051]
D JYK00_00675 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JYK00_08810 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JYK00_09535 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JYK00_02685 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JYK00_02845 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JYK00_02890 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JYK00_02850 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_02895 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_02955 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_00925 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_06740 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D JYK00_09600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_03635 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_01920 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JYK00_01760 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D JYK00_05725 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JYK00_01395 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tfe00052]
D JYK00_00720 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JYK00_09140 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JYK00_00715 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JYK00_06340 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JYK00_03380 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_05960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JYK00_00710 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_06740 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D JYK00_09600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_03635 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_08025 DUF5110 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D JYK00_02880 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:tfe00500]
D JYK00_00680 glycosyltransferase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D JYK00_08025 DUF5110 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JYK00_08705 M20/M25/M40 family metallo-hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JYK00_09335 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JYK00_05000 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JYK00_05005 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JYK00_09145 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JYK00_08330 DUF1957 domain-containing protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JYK00_08210 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JYK00_03910 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D JYK00_00605 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D JYK00_04765 alpha-amylase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JYK00_05605 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D JYK00_04250 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D JYK00_08650 glycosyltransferase K13057 treT; trehalose synthase [EC:2.4.1.245]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_05960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JYK00_06700 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JYK00_00675 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tfe00520]
D JYK00_04290 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JYK00_03135 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JYK00_00675 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JYK00_01645 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JYK00_04310 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JYK00_09060 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JYK00_06170 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JYK00_05795 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JYK00_08840 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JYK00_05820 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JYK00_01090 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JYK00_03495 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D JYK00_05960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_02880 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JYK00_00720 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JYK00_09140 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JYK00_00715 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JYK00_06340 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JYK00_03380 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JYK00_06700 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JYK00_08810 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JYK00_09535 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JYK00_02685 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JYK00_02845 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JYK00_02890 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JYK00_02850 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_02895 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_02955 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_05000 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JYK00_05005 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tfe00620]
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D JYK00_08745 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_09570 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_07745 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_08740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_05720 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JYK00_03310 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D JYK00_03960 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JYK00_00050 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JYK00_00545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JYK00_00910 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D JYK00_09580 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JYK00_05430 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JYK00_06180 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tfe00630]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_01040 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JYK00_01060 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JYK00_00930 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JYK00_03560 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D JYK00_08785 hydroxyacid dehydrogenase K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D JYK00_07215 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02170 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02325 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JYK00_04510 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JYK00_04505 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JYK00_04515 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_07935 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JYK00_01155 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:tfe00640]
D JYK00_05720 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JYK00_03310 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D JYK00_01040 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JYK00_01060 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JYK00_00930 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JYK00_01700 succinyl-CoA synthetase K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JYK00_01695 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JYK00_00545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JYK00_05110 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:tfe00650]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_06060 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_06055 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_08760 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D JYK00_08770 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D JYK00_09740 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D JYK00_08765 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D JYK00_09580 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JYK00_01055 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D JYK00_08745 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_09570 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_07745 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_08740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
C 00660 C5-Branched dibasic acid metabolism
D JYK00_01700 succinyl-CoA synthetase K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JYK00_01695 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:tfe00562]
D JYK00_01355 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tfe00190]
D JYK00_00480 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D JYK00_00485 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D JYK00_00490 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D JYK00_00820 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D JYK00_00835 NAD(P)H-dependent oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D JYK00_00815 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D JYK00_00825 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D JYK00_00475 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D JYK00_00465 Na+/H+ antiporter subunit D K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D JYK00_05310 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JYK00_05300 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JYK00_05305 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JYK00_05315 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JYK00_05295 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JYK00_05330 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JYK00_05320 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JYK00_05325 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tfe00710]
D JYK00_07005 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JYK00_07000 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JYK00_05725 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JYK00_01920 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JYK00_07770 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JYK00_01395 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JYK00_08415 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JYK00_07990 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JYK00_05430 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D JYK00_06180 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tfe00720]
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D JYK00_06180 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JYK00_01695 CoA-binding protein K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JYK00_01700 succinyl-CoA synthetase K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_08745 3-methyl-2-oxobutanoate dehydrogenase subunit VorB K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_09570 2-oxoacid:acceptor oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JYK00_07745 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_08740 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JYK00_07750 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D JYK00_08735 2-oxoacid:acceptor oxidoreductase family protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D JYK00_08750 ferredoxin family protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D JYK00_09575 4Fe-4S binding protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D JYK00_01040 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JYK00_00930 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JYK00_01060 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JYK00_05410 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JYK00_09625 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JYK00_07395 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D JYK00_03310 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D JYK00_05720 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:tfe00680]
D JYK00_02325 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JYK00_01155 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JYK00_06135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JYK00_05725 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JYK00_01920 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_06740 1-phosphofructokinase family hexose kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D JYK00_09600 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_03635 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JYK00_00370 NapC/NirT family cytochrome c K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D JYK00_05720 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D JYK00_06635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JYK00_03645 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:tfe00910]
D JYK00_07205 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D JYK00_04795 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D JYK00_05405 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_00725 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_07215 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02170 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_05945 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JYK00_00495 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JYK00_09735 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:tfe00920]
D JYK00_02550 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JYK00_02575 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JYK00_08850 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JYK00_02115 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JYK00_02110 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JYK00_07885 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tfe00061]
D JYK00_08800 acyl carrier protein K02078 acpP; acyl carrier protein
D JYK00_00730 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D JYK00_06945 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JYK00_06750 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JYK00_06965 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JYK00_06770 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JYK00_06960 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JYK00_06955 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tfe00071]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tfe00561]
D JYK00_01155 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JYK00_05650 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JYK00_01640 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JYK00_05830 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JYK00_00115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JYK00_07755 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JYK00_00710 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tfe00564]
D JYK00_08280 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JYK00_05635 NAD(P)/FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JYK00_05830 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JYK00_00115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JYK00_07755 diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JYK00_08590 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JYK00_05770 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JYK00_00970 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tfe00600]
D JYK00_00710 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tfe00230]
D JYK00_02345 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_06165 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JYK00_01835 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JYK00_01815 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JYK00_01825 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JYK00_01840 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JYK00_01850 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JYK00_01845 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JYK00_01830 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JYK00_01860 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JYK00_01855 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JYK00_05465 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JYK00_09230 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JYK00_01820 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JYK00_06705 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JYK00_00085 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JYK00_02495 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JYK00_08855 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JYK00_03320 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JYK00_07525 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JYK00_02600 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JYK00_09305 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JYK00_07165 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JYK00_04730 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JYK00_06085 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JYK00_03665 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JYK00_08720 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JYK00_02070 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JYK00_01710 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JYK00_01790 deoxynucleoside kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D JYK00_04340 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JYK00_01235 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JYK00_00745 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JYK00_07895 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D JYK00_00420 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JYK00_04120 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JYK00_06875 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JYK00_02575 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D JYK00_02550 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JYK00_09735 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:tfe00240]
D JYK00_01865 bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D JYK00_01870 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JYK00_01880 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JYK00_01875 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D JYK00_01890 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JYK00_01885 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JYK00_01590 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JYK00_04730 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JYK00_06875 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JYK00_04865 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JYK00_02585 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JYK00_07975 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JYK00_06220 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JYK00_07730 nucleoside kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JYK00_09385 AAA family ATPase K00876 udk; uridine kinase [EC:2.7.1.48]
D JYK00_00085 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JYK00_02495 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JYK00_06560 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JYK00_00420 5'-nucleotidase C-terminal domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D JYK00_05440 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D JYK00_06715 thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D JYK00_00265 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JYK00_01710 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JYK00_02070 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JYK00_07740 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JYK00_03240 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JYK00_00415 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JYK00_09635 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D JYK00_08375 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tfe00250]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_03600 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JYK00_03740 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JYK00_06195 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JYK00_00745 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JYK00_05465 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JYK00_01865 bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D JYK00_05945 gltA; NADPH-dependent glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JYK00_00495 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JYK00_05405 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_00725 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_00015 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D JYK00_07215 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02170 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_01845 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JYK00_01645 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JYK00_04310 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JYK00_01835 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tfe00260]
D JYK00_07380 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04540 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04565 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JYK00_05505 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JYK00_02325 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JYK00_08785 hydroxyacid dehydrogenase K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D JYK00_01155 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D JYK00_06635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D JYK00_08780 alanine--glyoxylate aminotransferase family protein K13290 K13290; serine---pyruvate transaminase [EC:2.6.1.51]
D JYK00_06425 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JYK00_06420 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D JYK00_04510 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JYK00_04505 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JYK00_04515 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_07935 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JYK00_08115 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JYK00_08110 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D JYK00_08315 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JYK00_08320 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00270 Cysteine and methionine metabolism [PATH:tfe00270]
D JYK00_02115 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JYK00_02110 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JYK00_07885 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JYK00_08110 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D JYK00_01565 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JYK00_08115 pyridoxal-phosphate dependent enzyme K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JYK00_07405 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_07775 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_07695 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JYK00_09525 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JYK00_09520 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JYK00_01575 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JYK00_07525 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JYK00_02600 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JYK00_00180 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D JYK00_05070 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D JYK00_06475 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JYK00_08100 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JYK00_07380 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04540 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04565 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JYK00_07385 4Fe-4S binding protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D JYK00_01745 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_00545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JYK00_08315 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JYK00_08320 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:tfe00280]
D JYK00_01745 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_01040 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JYK00_01060 cobalamin B12-binding domain-containing protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JYK00_00930 methylmalonyl-CoA mutase family protein K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tfe00290]
D JYK00_01745 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:tfe00300]
D JYK00_07380 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04540 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04565 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JYK00_04555 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JYK00_04550 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JYK00_04545 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JYK00_04535 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JYK00_07475 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JYK00_04485 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JYK00_04560 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JYK00_03540 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JYK00_03535 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JYK00_08775 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D JYK00_05130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JYK00_02085 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tfe00310]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_06035 ablA; lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D JYK00_06015 lysine 5,6-aminomutase subunit alpha K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D JYK00_06010 cobalamin-dependent protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D JYK00_06040 L-erythro-3,5-diaminohexanoate dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11]
D JYK00_06045 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D JYK00_06050 3-aminobutyryl-CoA ammonia lyase K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14]
D JYK00_06060 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_06055 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_04200 NADP-binding protein K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
C 00220 Arginine biosynthesis [PATH:tfe00220]
D JYK00_08580 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JYK00_01845 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JYK00_07215 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02170 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_09735 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JYK00_05405 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_00725 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04535 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tfe00330]
D JYK00_05550 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D JYK00_09520 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D JYK00_09525 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D JYK00_08630 peptide amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JYK00_00015 pruA; L-glutamate gamma-semialdehyde dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04200 NADP-binding protein K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
C 00340 Histidine metabolism [PATH:tfe00340]
D JYK00_02590 PHP domain-containing protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D JYK00_07680 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JYK00_04480 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JYK00_04850 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JYK00_01350 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00360 Phenylalanine metabolism [PATH:tfe00360]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_08630 peptide amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:tfe00380]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_08630 peptide amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tfe00400]
D JYK00_02315 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tfe00410]
D JYK00_05270 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JYK00_08030 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JYK00_08375 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:tfe00430]
D JYK00_03310 phosphate propanoyltransferase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D JYK00_05720 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tfe00450]
D JYK00_01565 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JYK00_07405 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_07775 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_08110 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D JYK00_04275 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JYK00_02550 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JYK00_01425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tfe00460]
D JYK00_03600 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JYK00_02325 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tfe00470]
D JYK00_05230 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JYK00_09165 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_02095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_01845 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JYK00_06255 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JYK00_04965 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JYK00_08525 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D JYK00_04560 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JYK00_03540 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JYK00_06015 lysine 5,6-aminomutase subunit alpha K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D JYK00_06010 cobalamin-dependent protein K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D JYK00_04200 NADP-binding protein K21672 ord; 2,4-diaminopentanoate dehydrogenase [EC:1.4.1.12 1.4.1.26]
D JYK00_08860 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
D JYK00_04220 cobalamin-dependent protein K17898 oraE; D-ornithine 4,5-aminomutase subunit beta [EC:5.4.3.5]
D JYK00_04215 ornithine aminomutase subunit alpha K17899 oraS; D-ornithine 4,5-aminomutase subunit alpha [EC:5.4.3.5]
C 00480 Glutathione metabolism [PATH:tfe00480]
D JYK00_05550 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D JYK00_09520 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tfe00511]
D JYK00_08155 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D JYK00_09215 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis [PATH:tfe00540]
D JYK00_02915 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D JYK00_02910 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
C 00542 O-Antigen repeat unit biosynthesis [PATH:tfe00542]
D JYK00_05145 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tfe00541]
D JYK00_06340 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JYK00_03380 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JYK00_02880 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JYK00_03670 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03745 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03750 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JYK00_03755 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D JYK00_08810 class I mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JYK00_09535 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JYK00_02685 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JYK00_02845 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JYK00_02890 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D JYK00_02850 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_02895 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_02955 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D JYK00_06170 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JYK00_05820 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JYK00_01090 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D JYK00_03495 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
C 00550 Peptidoglycan biosynthesis [PATH:tfe00550]
D JYK00_05795 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JYK00_08840 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JYK00_03570 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JYK00_04965 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JYK00_05130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JYK00_09165 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_02095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_02085 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JYK00_05765 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JYK00_04845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JYK00_05140 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JYK00_03565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JYK00_01360 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JYK00_07865 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:tfe00552]
D JYK00_04845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JYK00_05145 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JYK00_05560 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tfe00543]
D JYK00_05145 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JYK00_02115 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tfe00730]
D JYK00_09430 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D JYK00_09425 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D JYK00_05395 SufS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JYK00_00120 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JYK00_08085 hydG; [FeFe] hydrogenase H-cluster radical SAM maturase HydG K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D JYK00_09435 radical SAM protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D JYK00_05060 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JYK00_09440 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D JYK00_00280 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JYK00_05670 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JYK00_07095 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D JYK00_04120 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tfe00740]
D JYK00_03845 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JYK00_02345 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:tfe00750]
D JYK00_05505 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JYK00_00935 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D JYK00_00940 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tfe00760]
D JYK00_01480 nadX; aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D JYK00_01475 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JYK00_01470 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JYK00_04520 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JYK00_08855 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JYK00_03320 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JYK00_00085 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D JYK00_02495 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JYK00_04695 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JYK00_06875 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JYK00_09190 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JYK00_06610 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D JYK00_09120 cysteine hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D JYK00_09655 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JYK00_06925 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JYK00_05500 (2Fe-2S)-binding protein K20446 ndhS; nicotinate dehydrogenase small FeS subunit [EC:1.17.1.5]
C 00770 Pantothenate and CoA biosynthesis [PATH:tfe00770]
D JYK00_04390 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JYK00_08030 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JYK00_06230 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D JYK00_04395 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JYK00_06875 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JYK00_03830 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JYK00_06690 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JYK00_01745 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JYK00_08375 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JYK00_05270 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tfe00780]
D JYK00_06965 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JYK00_06770 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JYK00_06960 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JYK00_08095 hydE; [FeFe] hydrogenase H-cluster radical SAM maturase HydE K01012 bioB; biotin synthase [EC:2.8.1.6]
D JYK00_08050 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tfe00785]
D JYK00_05255 lipoate--protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JYK00_05995 radical SAM protein K09711 lipS1; lipoyl synthase
D JYK00_07080 radical SAM protein K24689 lipS2; lipoyl synthase
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_04510 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D JYK00_04505 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D JYK00_04515 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JYK00_07935 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tfe00790]
D JYK00_00690 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D JYK00_05670 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JYK00_00915 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D JYK00_01930 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JYK00_02365 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JYK00_00170 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JYK00_01570 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D JYK00_00380 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D JYK00_02190 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JYK00_02185 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JYK00_02180 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JYK00_02210 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JYK00_06460 NTP transferase domain-containing protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:tfe00670]
D JYK00_02365 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JYK00_05410 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JYK00_09625 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JYK00_02325 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JYK00_01825 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JYK00_09230 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JYK00_01820 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JYK00_01350 ftcD; glutamate formimidoyltransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D JYK00_04975 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JYK00_03370 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JYK00_04515 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JYK00_07405 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_07775 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_09635 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D JYK00_07395 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
D JYK00_01365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D JYK00_07505 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tfe00900]
D JYK00_05060 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JYK00_07100 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JYK00_09725 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JYK00_01175 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JYK00_01545 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JYK00_07970 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_06210 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JYK00_07495 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JYK00_05765 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JYK00_02530 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JYK00_07770 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tfe00523]
D JYK00_03670 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03745 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03750 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D JYK00_03750 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:tfe00261]
D JYK00_02550 sat; sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D JYK00_07380 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04540 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JYK00_04565 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JYK00_04555 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JYK00_04550 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tfe00521]
D JYK00_05960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JYK00_02305 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JYK00_01355 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JYK00_03670 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03745 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03750 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JYK00_05960 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:tfe00525]
D JYK00_03670 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03745 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JYK00_03750 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D JYK00_06945 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JYK00_06770 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JYK00_08800 acyl carrier protein K02078 acpP; acyl carrier protein
D JYK00_00730 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D JYK00_07695 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D JYK00_08860 alanine/ornithine racemase family PLP-dependent enzyme K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tfe00362]
D JYK00_09580 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JYK00_01055 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:tfe00627]
D JYK00_08630 peptide amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JYK00_00050 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JYK00_06060 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_06055 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D JYK00_08345 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D JYK00_08350 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D JYK00_08335 2-oxoacid:acceptor oxidoreductase family protein K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D JYK00_08340 4Fe-4S binding protein K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:tfe00643]
D JYK00_08630 peptide amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tfe03020]
D JYK00_01900 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JYK00_01895 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JYK00_04155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JYK00_08715 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tfe03010]
D JYK00_07965 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D JYK00_03235 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JYK00_04045 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JYK00_04150 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JYK00_04100 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JYK00_02285 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JYK00_03995 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JYK00_04085 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JYK00_05205 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JYK00_04010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JYK00_04145 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JYK00_03990 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JYK00_04140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JYK00_04080 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JYK00_08875 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JYK00_08450 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JYK00_04060 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JYK00_02275 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JYK00_04035 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JYK00_07690 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JYK00_02235 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JYK00_04030 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JYK00_04015 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JYK00_04020 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JYK00_04075 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JYK00_04090 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JYK00_01905 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JYK00_09045 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JYK00_01910 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JYK00_02240 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JYK00_05200 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JYK00_04065 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JYK00_04110 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JYK00_04050 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JYK00_04160 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JYK00_04095 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JYK00_08475 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JYK00_03230 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JYK00_05180 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JYK00_04040 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JYK00_04025 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JYK00_04070 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JYK00_06160 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JYK00_05190 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JYK00_05225 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JYK00_04055 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JYK00_04105 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JYK00_00805 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JYK00_01635 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JYK00_02260 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JYK00_07255 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JYK00_03225 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JYK00_04135 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JYK00_02065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JYK00_02050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JYK00_02045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tfe00970]
D JYK00_02055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JYK00_08790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JYK00_05365 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JYK00_00065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_03210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_05665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_00075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_05350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_01105 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JYK00_00840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JYK00_02295 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JYK00_01210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JYK00_03985 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JYK00_08955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JYK00_03205 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JYK00_07150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JYK00_02230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JYK00_00060 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JYK00_00070 tRNA-His K14226 tRNA-His; tRNA His
D JYK00_02060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JYK00_05620 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_05555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_00620 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_02225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_07130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_02220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JYK00_03215 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JYK00_00615 tRNA-Met K14230 tRNA-Met; tRNA Met
D JYK00_02290 tRNA-Met K14230 tRNA-Met; tRNA Met
D JYK00_04810 tRNA-Met K14230 tRNA-Met; tRNA Met
D JYK00_08945 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JYK00_04335 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JYK00_03660 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JYK00_00055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JYK00_05660 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_06525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_01505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_06660 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_02270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JYK00_04685 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JYK00_03625 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JYK00_02255 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JYK00_02265 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JYK00_08950 tRNA-Val K14237 tRNA-Val; tRNA Val
D JYK00_00550 tRNA-Val K14237 tRNA-Val; tRNA Val
D JYK00_03980 tRNA-Val K14237 tRNA-Val; tRNA Val
D JYK00_01365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JYK00_09100 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JYK00_03445 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JYK00_03440 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JYK00_05025 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JYK00_05775 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JYK00_03455 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JYK00_07985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JYK00_05125 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JYK00_02405 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JYK00_02410 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JYK00_05520 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JYK00_05065 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JYK00_09095 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JYK00_01425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JYK00_04975 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JYK00_03370 hypothetical protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JYK00_00165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JYK00_05080 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JYK00_03920 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JYK00_06285 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JYK00_08915 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JYK00_09090 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JYK00_03685 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JYK00_03530 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JYK00_05850 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JYK00_06120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JYK00_01185 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tfe03060]
D JYK00_04115 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JYK00_02250 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JYK00_06115 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JYK00_09615 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JYK00_09610 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JYK00_09620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JYK00_07240 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JYK00_01025 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JYK00_08445 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JYK00_06490 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D JYK00_09280 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JYK00_08480 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tfe04122]
D JYK00_05395 SufS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JYK00_09300 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JYK00_02190 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JYK00_06185 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JYK00_09420 ThiF family adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D JYK00_02185 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JYK00_02180 MogA/MoaB family molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D JYK00_00120 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JYK00_09445 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:tfe03018]
D JYK00_06135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JYK00_08020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JYK00_06900 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JYK00_02485 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JYK00_06555 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JYK00_00990 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_05900 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JYK00_05375 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JYK00_07715 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tfe03030]
D JYK00_01610 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JYK00_08420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JYK00_05165 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JYK00_06575 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JYK00_09585 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JYK00_00945 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JYK00_00670 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JYK00_03835 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JYK00_05210 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JYK00_02280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JYK00_09640 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JYK00_09675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JYK00_00245 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tfe03410]
D JYK00_03850 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JYK00_06350 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JYK00_06600 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JYK00_09675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JYK00_05360 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JYK00_00245 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tfe03420]
D JYK00_00565 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JYK00_06145 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JYK00_06680 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JYK00_07925 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JYK00_02630 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JYK00_02735 PD-(D/E)XK nuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JYK00_09675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JYK00_00245 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tfe03430]
D JYK00_02150 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JYK00_06020 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D JYK00_09690 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JYK00_04760 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JYK00_02630 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JYK00_02735 PD-(D/E)XK nuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JYK00_09670 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JYK00_05360 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JYK00_02280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JYK00_08420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JYK00_05165 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JYK00_00670 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JYK00_06575 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JYK00_00945 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JYK00_09585 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JYK00_01610 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JYK00_00245 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tfe03440]
D JYK00_05360 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JYK00_02280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JYK00_00980 recA; recombinase RecA K03553 recA; recombination protein RecA
D JYK00_09675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JYK00_03485 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JYK00_06940 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JYK00_05170 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JYK00_07085 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JYK00_08420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JYK00_05165 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JYK00_00670 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JYK00_06575 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JYK00_00945 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JYK00_09585 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JYK00_01610 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JYK00_02385 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tfe02010]
D JYK00_02205 extracellular solute-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D JYK00_02195 ABC transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein
D JYK00_02200 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JYK00_08200 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D JYK00_08205 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D JYK00_01980 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JYK00_01975 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D JYK00_07435 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JYK00_00785 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JYK00_08645 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D JYK00_08640 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D JYK00_08635 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D JYK00_07955 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JYK00_00025 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JYK00_00035 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JYK00_00040 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JYK00_00030 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JYK00_01335 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D JYK00_01330 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D JYK00_01325 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D JYK00_06820 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D JYK00_06825 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JYK00_06830 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D JYK00_06835 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D JYK00_08605 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JYK00_08600 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JYK00_08595 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JYK00_08690 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D JYK00_08685 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JYK00_08680 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JYK00_08675 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JYK00_01655 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D JYK00_01660 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D JYK00_01665 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JYK00_01530 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JYK00_02020 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JYK00_06790 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_01525 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_02015 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_06795 alpha/beta fold hydrolase K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_01520 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_02010 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_06780 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_01515 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_02005 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_06785 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_01510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_02000 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_00765 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JYK00_00775 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JYK00_00770 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JYK00_06950 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JYK00_06735 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JYK00_07815 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JYK00_09590 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JYK00_02475 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JYK00_00090 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_06485 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_03145 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_03140 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
D JYK00_01760 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:tfe03070]
D JYK00_09615 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JYK00_09610 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JYK00_02250 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JYK00_06115 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JYK00_04115 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JYK00_09620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JYK00_07240 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JYK00_01025 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JYK00_09280 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JYK00_08445 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tfe02020]
D JYK00_06720 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JYK00_05670 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JYK00_08690 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D JYK00_08245 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D JYK00_07900 flagellin K02406 fliC; flagellin
D JYK00_03765 flagellin K02406 fliC; flagellin
D JYK00_03770 flagellin K02406 fliC; flagellin
D JYK00_08995 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JYK00_04445 motility protein A K02556 motA; chemotaxis protein MotA
D JYK00_00370 NapC/NirT family cytochrome c K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D JYK00_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JYK00_05030 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JYK00_07215 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02170 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_06060 atoD; acetate CoA-transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_06055 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_05445 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JYK00_04185 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JYK00_07180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08295 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_09555 CZB domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_00895 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_01195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_02615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_03325 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_02380 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JYK00_03265 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JYK00_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JYK00_03260 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JYK00_07760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JYK00_05820 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JYK00_08705 M20/M25/M40 family metallo-hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JYK00_09335 glycoside hydrolase family 5 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JYK00_01260 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D JYK00_05550 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tfe02024]
D JYK00_07715 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D JYK00_01530 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JYK00_02020 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JYK00_06790 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_01525 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_02015 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_06795 alpha/beta fold hydrolase K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_01520 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_02010 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_06780 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_01515 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_02005 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_06785 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_01510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_02000 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_06510 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_06670 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_07620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_00295 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_06515 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_07615 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_07920 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_00300 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_06520 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JYK00_07915 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JYK00_00305 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JYK00_06500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_07605 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_07910 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_00310 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_06505 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_07600 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_07905 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_00315 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_07240 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JYK00_02250 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JYK00_06115 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JYK00_04115 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JYK00_09620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JYK00_01025 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JYK00_09280 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JYK00_08445 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tfe02030]
D JYK00_07180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08295 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_09555 CZB domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_00895 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_01195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_02615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_03325 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_01980 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JYK00_06820 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D JYK00_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JYK00_02380 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JYK00_03265 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JYK00_03260 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JYK00_08985 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D JYK00_01580 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JYK00_07760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JYK00_08990 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D JYK00_04185 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JYK00_01615 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JYK00_04430 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JYK00_04425 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JYK00_04445 motility protein A K02556 motA; chemotaxis protein MotA
D JYK00_04440 OmpA family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tfe02040]
D JYK00_00995 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JYK00_01615 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JYK00_05715 flagellar export/assembly protein K02411 fliH; flagellar assembly protein FliH
D JYK00_05710 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JYK00_03585 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D JYK00_04435 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D JYK00_04430 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JYK00_04425 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JYK00_03255 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JYK00_03250 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JYK00_03245 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JYK00_03330 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JYK00_08960 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JYK00_03335 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JYK00_01730 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D JYK00_01005 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JYK00_01000 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JYK00_04460 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JYK00_04455 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D JYK00_03940 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D JYK00_03945 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JYK00_01725 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D JYK00_01720 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D JYK00_01250 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JYK00_01245 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JYK00_07900 flagellin K02406 fliC; flagellin
D JYK00_03765 flagellin K02406 fliC; flagellin
D JYK00_03770 flagellin K02406 fliC; flagellin
D JYK00_08890 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JYK00_02335 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JYK00_04445 motility protein A K02556 motA; chemotaxis protein MotA
D JYK00_04440 OmpA family protein K02557 motB; chemotaxis protein MotB
D JYK00_01260 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JYK00_05215 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JYK00_05445 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JYK00_08995 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JYK00_06135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:tfe04980]
D JYK00_01065 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D JYK00_07405 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JYK00_07775 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tfe01501]
D JYK00_04290 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JYK00_01360 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JYK00_07865 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tfe01502]
D JYK00_09165 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_02095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_05230 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JYK00_02085 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JYK00_05140 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JYK00_03565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D JYK00_08245 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tfe01000]
C 01001 Protein kinases [BR:tfe01001]
D JYK00_04355 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JYK00_02695 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D JYK00_06720 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JYK00_08660 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JYK00_08910 GHKL domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JYK00_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tfe01009]
D JYK00_08100 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:tfe01002]
D JYK00_08255 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JYK00_03665 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JYK00_01835 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JYK00_01645 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JYK00_04310 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JYK00_03740 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JYK00_07500 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JYK00_00375 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JYK00_01990 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JYK00_03390 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JYK00_06295 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JYK00_02700 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JYK00_07475 pepV; dipeptidase PepV K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JYK00_04485 M20 family metallo-hydrolase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JYK00_03535 amidohydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JYK00_04125 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JYK00_05345 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JYK00_06310 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D JYK00_00705 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D JYK00_04825 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JYK00_07645 M42 family metallopeptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D JYK00_02530 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D JYK00_01550 site-2 protease family protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JYK00_05915 site-2 protease family protein K16922 yydH; putative peptide zinc metalloprotease protein
D JYK00_09745 M55 family metallopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D JYK00_08245 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D JYK00_04170 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JYK00_08925 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D JYK00_01410 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JYK00_08480 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JYK00_04915 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D JYK00_03595 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D JYK00_04945 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D JYK00_08410 TldD/PmbA family protein K03592 pmbA; PmbA protein
D JYK00_08405 TldD/PmbA family protein K03568 tldD; TldD protein
D JYK00_07365 alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D JYK00_02430 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D JYK00_02425 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tfe01003]
D JYK00_09145 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D JYK00_05560 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D JYK00_05145 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JYK00_07440 glycosyltransferase family 4 protein K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tfe01005]
D JYK00_02915 gmhA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D JYK00_05145 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tfe01011]
D JYK00_05795 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JYK00_08840 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JYK00_03570 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JYK00_04965 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JYK00_05130 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JYK00_09165 ATP-grasp domain-containing protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_02095 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JYK00_05230 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JYK00_06255 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JYK00_05140 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JYK00_03565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JYK00_04845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JYK00_08045 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JYK00_01360 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D JYK00_07865 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01004 Lipid biosynthesis proteins [BR:tfe01004]
D JYK00_06945 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JYK00_06750 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JYK00_06965 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JYK00_06770 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JYK00_06960 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JYK00_06955 fabK; enoyl-[acyl-carrier-protein] reductase FabK K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D JYK00_01640 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JYK00_05830 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JYK00_00115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tfe01006]
D JYK00_06210 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JYK00_07495 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D JYK00_05765 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JYK00_06580 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JYK00_07505 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:tfe01007]
D JYK00_01365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JYK00_09100 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JYK00_06120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JYK00_01185 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JYK00_09095 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JYK00_08915 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JYK00_01425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JYK00_03920 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JYK00_00165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JYK00_05080 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JYK00_06285 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JYK00_07985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JYK00_05125 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JYK00_03685 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JYK00_02405 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JYK00_02410 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JYK00_05065 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JYK00_09090 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JYK00_05520 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JYK00_05775 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JYK00_03455 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JYK00_03530 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JYK00_05850 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JYK00_05460 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_04710 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JYK00_06425 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D JYK00_01565 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JYK00_04535 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JYK00_01745 aminotransferase class IV family protein K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JYK00_03755 rffA; dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tfe00194]
D JYK00_05295 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JYK00_05300 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JYK00_05305 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JYK00_05310 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JYK00_05315 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JYK00_05320 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JYK00_05325 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JYK00_05330 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tfe03000]
D JYK00_01295 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JYK00_06645 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JYK00_00760 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JYK00_03870 transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D JYK00_06445 helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D JYK00_07650 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JYK00_08050 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JYK00_00430 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D JYK00_03200 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D JYK00_00515 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D JYK00_05575 metal-sensing transcriptional repressor K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JYK00_05655 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D JYK00_09205 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JYK00_06275 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:tfe03021]
D JYK00_04155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JYK00_01900 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JYK00_01895 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JYK00_08715 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JYK00_05215 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JYK00_02640 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JYK00_07120 sigma-70 family RNA polymerase sigma factor K27000 sigH; RNA polymerase sigma-H factor
D JYK00_05445 RNA polymerase subunit sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D JYK00_08995 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JYK00_06650 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JYK00_02440 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JYK00_02245 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D JYK00_02455 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D JYK00_07980 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D JYK00_01405 STAS domain-containing protein K04749 rsbV; anti-sigma B factor antagonist
D JYK00_04355 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D JYK00_05045 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D JYK00_06280 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JYK00_06555 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tfe03019]
D JYK00_07735 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D JYK00_08060 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JYK00_00990 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JYK00_06900 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JYK00_05235 HD domain-containing protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D JYK00_02485 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JYK00_06135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JYK00_08020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JYK00_06555 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JYK00_07140 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JYK00_05900 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JYK00_05375 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JYK00_07715 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D JYK00_05030 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D JYK00_06260 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:tfe03011]
D JYK00_07965 S1 RNA-binding domain-containing protein K02945 RP-S1; small subunit ribosomal protein S1
D JYK00_03235 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JYK00_04045 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JYK00_04150 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JYK00_04100 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JYK00_02285 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JYK00_03995 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JYK00_04085 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JYK00_05205 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JYK00_04010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JYK00_04145 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JYK00_03990 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JYK00_04140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JYK00_04080 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JYK00_08875 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JYK00_08450 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JYK00_04060 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JYK00_02275 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JYK00_04035 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JYK00_07690 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JYK00_02235 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JYK00_04030 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JYK00_04015 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JYK00_04020 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JYK00_04075 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JYK00_04090 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JYK00_09045 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JYK00_01910 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JYK00_02240 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JYK00_01905 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JYK00_05200 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JYK00_04065 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JYK00_04110 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JYK00_04050 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JYK00_04160 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JYK00_04095 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JYK00_08475 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JYK00_03230 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JYK00_05180 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JYK00_04040 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JYK00_04025 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JYK00_04070 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JYK00_05190 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JYK00_05225 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JYK00_04055 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JYK00_04105 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JYK00_00805 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JYK00_01635 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JYK00_02260 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JYK00_07255 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JYK00_03225 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JYK00_04135 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JYK00_06160 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D JYK00_02045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JYK00_02065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JYK00_02050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tfe03009]
D JYK00_08060 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JYK00_05855 era; GTPase Era K03595 era; GTPase
D JYK00_04690 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JYK00_06650 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D JYK00_02440 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JYK00_02245 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D JYK00_01925 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JYK00_04980 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JYK00_06895 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JYK00_05085 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JYK00_05565 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JYK00_07875 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JYK00_05250 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JYK00_03280 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JYK00_06880 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JYK00_06080 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JYK00_04495 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D JYK00_07065 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JYK00_00290 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JYK00_06910 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JYK00_06975 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JYK00_03975 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D JYK00_04190 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JYK00_01715 rod-binding protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D JYK00_08460 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D JYK00_00965 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D JYK00_05925 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D JYK00_06070 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JYK00_07735 Rne/Rng family ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D JYK00_05355 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JYK00_08395 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D JYK00_02485 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JYK00_00280 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JYK00_07960 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D JYK00_01585 50S ribosome-binding GTPase K14540 rbgA; ribosome biogenesis GTPase A
D JYK00_07710 hflX; GTPase HflX K03665 hflX; GTPase
D JYK00_03305 50S ribosome-binding GTPase K06948 yqeH; 30S ribosome assembly GTPase
D JYK00_04950 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JYK00_04340 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JYK00_08900 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JYK00_06655 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JYK00_00175 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JYK00_01085 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JYK00_05280 HPF/RaiA family ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor
D JYK00_01630 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tfe03016]
D JYK00_09040 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JYK00_09030 CBS domain-containing protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JYK00_03825 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D JYK00_01415 archease K24956 ZBTB8OS; protein archease
D JYK00_01365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JYK00_09090 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JYK00_03920 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JYK00_05080 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JYK00_01425 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JYK00_08915 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JYK00_06285 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JYK00_07985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JYK00_05775 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JYK00_03455 alanyl-tRNA editing protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JYK00_05125 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JYK00_05520 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JYK00_05065 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JYK00_09095 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JYK00_00165 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JYK00_03685 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JYK00_03530 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JYK00_05850 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JYK00_06120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JYK00_01185 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JYK00_04345 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JYK00_00740 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JYK00_04920 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D JYK00_08275 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JYK00_03290 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JYK00_03525 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JYK00_05395 SufS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JYK00_04950 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JYK00_06580 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JYK00_05570 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JYK00_03955 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JYK00_07250 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JYK00_05730 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D JYK00_00975 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D JYK00_02405 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JYK00_02410 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JYK00_09100 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JYK00_04700 tRNA-dihydrouridine synthase family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D JYK00_09110 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JYK00_01750 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D JYK00_04970 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JYK00_08465 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JYK00_09300 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JYK00_08870 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JYK00_01570 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D JYK00_04350 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D JYK00_09070 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JYK00_00120 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JYK00_04830 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JYK00_02155 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JYK00_01805 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JYK00_08930 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JYK00_00560 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D JYK00_06900 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JYK00_08020 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tfe03012]
D JYK00_00905 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JYK00_03220 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JYK00_02510 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JYK00_02595 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D JYK00_04005 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JYK00_04000 fusA; elongation factor G K02355 fusA; elongation factor G
D JYK00_04475 fusA; elongation factor G K02355 fusA; elongation factor G
D JYK00_06565 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JYK00_05760 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JYK00_09050 peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JYK00_06155 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JYK00_04130 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JYK00_02450 efp; elongation factor P K02356 efp; elongation factor P
D JYK00_09250 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tfe03110]
D JYK00_00860 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JYK00_01985 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JYK00_02390 AAA family ATPase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JYK00_01800 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JYK00_08005 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D JYK00_05900 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JYK00_05375 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JYK00_09195 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JYK00_05420 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D JYK00_09200 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JYK00_05905 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D JYK00_05370 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JYK00_08245 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D JYK00_04825 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JYK00_05330 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JYK00_04270 glutaredoxin family protein K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:tfe04131]
D JYK00_04730 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JYK00_08155 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D JYK00_09215 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D JYK00_07000 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JYK00_03960 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JYK00_08235 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:tfe03032]
D JYK00_02310 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JYK00_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JYK00_03835 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JYK00_05210 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JYK00_02280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JYK00_08420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JYK00_05165 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JYK00_00670 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JYK00_00945 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JYK00_09585 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JYK00_01610 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JYK00_06575 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JYK00_09640 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JYK00_09675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JYK00_00245 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JYK00_01420 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JYK00_01735 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JYK00_05240 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tfe03036]
D JYK00_08060 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JYK00_02310 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JYK00_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JYK00_07715 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D JYK00_03575 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JYK00_04410 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JYK00_04415 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D JYK00_05740 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JYK00_07865 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JYK00_03425 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D JYK00_05745 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JYK00_01020 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JYK00_09255 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D JYK00_05780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JYK00_03935 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JYK00_02395 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D JYK00_03955 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JYK00_05565 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JYK00_04970 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JYK00_06140 tyrosine-type recombinase/integrase K04763 xerD; integrase/recombinase XerD
D JYK00_08865 hypothetical protein K04763 xerD; integrase/recombinase XerD
D JYK00_02505 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JYK00_08920 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D JYK00_06270 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tfe03400]
D JYK00_06465 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JYK00_03850 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JYK00_08430 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JYK00_06350 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JYK00_06600 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JYK00_09315 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D JYK00_05360 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JYK00_00245 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JYK00_09675 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JYK00_06145 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JYK00_06680 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JYK00_07925 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JYK00_02630 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JYK00_02735 PD-(D/E)XK nuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JYK00_01900 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JYK00_01895 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JYK00_04155 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JYK00_08715 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JYK00_00565 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JYK00_02150 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JYK00_06020 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D JYK00_09690 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JYK00_04760 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JYK00_09670 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JYK00_08420 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JYK00_05165 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JYK00_00670 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JYK00_00945 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JYK00_09585 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JYK00_01610 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JYK00_06575 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JYK00_02280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JYK00_00980 recA; recombinase RecA K03553 recA; recombination protein RecA
D JYK00_03485 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JYK00_06940 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JYK00_05170 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JYK00_02385 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JYK00_00855 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JYK00_07085 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JYK00_00260 AAA family ATPase K03631 recN; DNA repair protein RecN (Recombination protein N)
D JYK00_04640 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JYK00_01420 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JYK00_01735 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JYK00_05240 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JYK00_02310 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JYK00_01410 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JYK00_00985 RecX family transcriptional regulator K03565 recX; regulatory protein
D JYK00_02740 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D JYK00_02070 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JYK00_08850 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tfe03029]
D JYK00_00905 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JYK00_03220 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JYK00_02595 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D JYK00_04005 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JYK00_04000 fusA; elongation factor G K02355 fusA; elongation factor G
D JYK00_04475 fusA; elongation factor G K02355 fusA; elongation factor G
D JYK00_05855 era; GTPase Era K03595 era; GTPase
D JYK00_06120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JYK00_05080 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JYK00_07985 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JYK00_08915 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JYK00_03445 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JYK00_03440 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JYK00_05025 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JYK00_02280 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JYK00_05900 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JYK00_09200 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JYK00_05375 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JYK00_05370 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JYK00_09195 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JYK00_05395 SufS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JYK00_02505 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JYK00_07240 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tfe02000]
D JYK00_00090 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_06485 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_03145 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_03140 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JYK00_09415 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D JYK00_02200 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JYK00_02205 extracellular solute-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D JYK00_02195 ABC transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein
D JYK00_08200 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D JYK00_08205 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D JYK00_01980 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JYK00_01975 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D JYK00_07435 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JYK00_00785 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JYK00_01335 carbohydrate ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D JYK00_01330 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D JYK00_01325 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D JYK00_08645 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D JYK00_08640 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D JYK00_08635 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D JYK00_06820 rbsB; ribose ABC transporter substrate-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D JYK00_06825 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JYK00_06830 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D JYK00_08605 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D JYK00_08600 sugar ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D JYK00_08595 carbohydrate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D JYK00_07955 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JYK00_00025 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JYK00_00035 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JYK00_00040 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JYK00_00030 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JYK00_05590 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_07420 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_08185 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_01300 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_01535 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_01940 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_04295 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JYK00_05595 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_07425 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_08000 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_08175 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_01305 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_01945 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_04300 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D JYK00_05600 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JYK00_07430 ABC transporter permease subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JYK00_08170 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JYK00_01310 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JYK00_01950 ABC transporter permease subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JYK00_04305 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JYK00_08690 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D JYK00_08685 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JYK00_08680 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JYK00_08675 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JYK00_01655 basic amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D JYK00_01660 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D JYK00_01665 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JYK00_01530 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JYK00_02020 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JYK00_06790 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_01525 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_02015 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JYK00_06795 alpha/beta fold hydrolase K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_01520 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_02010 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JYK00_06780 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_01515 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_02005 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JYK00_06785 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_01510 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_02000 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JYK00_01785 HD-GYP domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JYK00_06510 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_06670 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_07620 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_00295 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JYK00_06515 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_07615 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_07920 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_00300 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JYK00_06520 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JYK00_07915 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JYK00_00305 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JYK00_06500 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_07605 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_07910 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_00310 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JYK00_06505 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_07600 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_07905 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_00315 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JYK00_07290 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D JYK00_07280 ABC transporter substrate-binding protein K25113 htsA; heme transport system substrate-binding protein
D JYK00_07285 iron ABC transporter permease K25114 htsB; heme transport system permease protein
D JYK00_04370 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JYK00_07105 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D JYK00_07110 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein
D JYK00_00765 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JYK00_00775 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JYK00_00770 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JYK00_06950 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JYK00_06735 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JYK00_07815 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JYK00_09590 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JYK00_02475 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D JYK00_00660 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D JYK00_00530 ABC transporter permease subunit K25147 berB; beta-exotoxin I transport system permease protein
D JYK00_00525 ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D JYK00_05890 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_06315 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_06325 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_00205 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_01490 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_01675 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_04315 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_04735 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_04775 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JYK00_05880 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_06320 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_00200 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_01485 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_01680 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_03690 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_04320 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_04780 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JYK00_05220 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JYK00_07090 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JYK00_05380 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JYK00_02560 SLC13/DASS family transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D JYK00_03110 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JYK00_06300 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JYK00_07595 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D JYK00_05175 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D JYK00_08235 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D JYK00_09505 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D JYK00_07225 potassium channel protein K10716 kch; voltage-gated potassium channel
D JYK00_01190 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D JYK00_04445 motility protein A K02556 motA; chemotaxis protein MotA
D JYK00_04440 OmpA family protein K02557 motB; chemotaxis protein MotB
D JYK00_07055 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D JYK00_06095 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D JYK00_03500 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D JYK00_01150 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D JYK00_07160 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D JYK00_06415 hypothetical protein K03312 gltS; glutamate:Na+ symporter, ESS family
D JYK00_07030 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D JYK00_07020 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JYK00_07025 NAD-binding protein K03499 trkA; trk/ktr system potassium uptake protein
D JYK00_03865 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JYK00_01440 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D JYK00_09660 chromate transporter K07240 chrA; chromate transporter
D JYK00_04230 chromate transporter K07240 chrA; chromate transporter
D JYK00_06620 cation:proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D JYK00_00455 cation:proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D JYK00_00460 NADH-quinone oxidoreductase subunit K K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D JYK00_03650 NADH-quinone oxidoreductase subunit K K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D JYK00_03640 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D JYK00_07625 hypothetical protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D JYK00_00435 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D JYK00_07630 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D JYK00_00440 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D JYK00_07635 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D JYK00_00445 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D JYK00_08045 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JYK00_08070 AEC family transporter K24180 mleP; malate permease and related proteins
D JYK00_05195 ECF transporter S component K23675 fmnP; riboflavin transporter
D JYK00_00845 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D JYK00_01265 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D JYK00_09225 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D JYK00_03425 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D JYK00_02605 FTR1 family protein K07243 FTR; high-affinity iron transporter
D JYK00_06730 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D JYK00_09605 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D JYK00_09580 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D JYK00_00910 pyruvate carboxylase subunit B K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D JYK00_01045 methylmalonyl-CoA carboxyltransferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D JYK00_01055 biotin/lipoyl-binding protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D JYK00_04260 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JYK00_00370 NapC/NirT family cytochrome c K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D JYK00_02695 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D JYK00_07945 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D JYK00_07940 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:tfe02044]
D JYK00_08255 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JYK00_05750 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JYK00_07820 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JYK00_06570 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JYK00_06930 YggT family protein K02221 yggT; YggT family protein
D JYK00_07860 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D JYK00_07740 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JYK00_06640 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D JYK00_09715 ComF family protein K02242 comFC; competence protein ComFC
D JYK00_08960 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JYK00_03335 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JYK00_09240 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D JYK00_05715 flagellar export/assembly protein K02411 fliH; flagellar assembly protein FliH
D JYK00_05710 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JYK00_04425 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JYK00_03255 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JYK00_03250 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JYK00_03245 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JYK00_03330 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JYK00_01025 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JYK00_09615 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JYK00_02250 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JYK00_09610 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JYK00_06115 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JYK00_04115 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JYK00_08445 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JYK00_09280 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JYK00_09620 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JYK00_07240 YidC/Oxa1 family membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tfe02042]
D JYK00_02705 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tfe02022]
D JYK00_06720 PAS domain-containing protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D JYK00_08660 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JYK00_08910 GHKL domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JYK00_06725 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JYK00_08665 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JYK00_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JYK00_03260 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JYK00_07760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JYK00_02460 response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:tfe02035]
D JYK00_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D JYK00_02380 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JYK00_03265 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D JYK00_01580 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D JYK00_08985 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D JYK00_08990 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D JYK00_04185 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D JYK00_07760 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JYK00_03260 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D JYK00_07180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08295 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_08575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_09555 CZB domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_00895 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_01195 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_02615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_03325 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D JYK00_05715 flagellar export/assembly protein K02411 fliH; flagellar assembly protein FliH
D JYK00_05710 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D JYK00_03585 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D JYK00_03255 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D JYK00_03250 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D JYK00_03245 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D JYK00_03330 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D JYK00_08960 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D JYK00_03335 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D JYK00_01615 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D JYK00_04430 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D JYK00_04425 fliY; flagellar motor switch phosphatase FliY K02417 fliN; flagellar motor switch protein FliN
D JYK00_01720 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D JYK00_01730 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D JYK00_01725 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D JYK00_04435 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D JYK00_00995 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D JYK00_01005 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D JYK00_01000 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D JYK00_04460 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D JYK00_03940 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D JYK00_03945 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D JYK00_04455 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D JYK00_01250 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D JYK00_01245 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D JYK00_07900 flagellin K02406 fliC; flagellin
D JYK00_03765 flagellin K02406 fliC; flagellin
D JYK00_03770 flagellin K02406 fliC; flagellin
D JYK00_08890 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D JYK00_02335 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D JYK00_08995 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D JYK00_04445 motility protein A K02556 motA; chemotaxis protein MotA
D JYK00_04440 OmpA family protein K02557 motB; chemotaxis protein MotB
D JYK00_05035 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D JYK00_01260 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D JYK00_08895 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D JYK00_04450 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D JYK00_08965 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D JYK00_08970 AAA family ATPase K04562 flhG; flagellar biosynthesis protein FlhG
D JYK00_06570 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D JYK00_05750 tadA; Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB
D JYK00_07820 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D JYK00_08255 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tfe04812]
D JYK00_07855 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D JYK00_05780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JYK00_03935 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JYK00_05745 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JYK00_05740 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JYK00_01020 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D JYK00_09255 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
C 04147 Exosome [BR:tfe04147]
D JYK00_06135 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JYK00_07000 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JYK00_07005 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JYK00_03960 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JYK00_03875 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D JYK00_05375 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JYK00_05900 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JYK00_06700 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JYK00_07165 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JYK00_04005 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JYK00_00740 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JYK00_00545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JYK00_06765 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JYK00_08100 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JYK00_04120 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JYK00_06705 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JYK00_08110 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D JYK00_08375 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JYK00_00720 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JYK00_05650 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JYK00_07215 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_02170 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JYK00_05670 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D JYK00_09230 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JYK00_01820 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JYK00_02530 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D JYK00_08515 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JYK00_00350 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JYK00_05405 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D JYK00_00725 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
C 02048 Prokaryotic defense system [BR:tfe02048]
D JYK00_04640 cas1b; type I-B CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D JYK00_09460 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JYK00_04635 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JYK00_04645 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D JYK00_09475 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D JYK00_09470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D JYK00_09495 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D JYK00_04575 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D JYK00_09490 TIGR02556 family CRISPR-associated protein K19114 csh1; CRISPR-associated protein Csh1
D JYK00_09485 cas7b; type I-B CRISPR-associated protein Cas7/Csh2 K19115 csh2; CRISPR-associated protein Csh2
D JYK00_09480 cas5b; type I-B CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D JYK00_04605 cas10; type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1
D JYK00_04600 csm2; type III-A CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2
D JYK00_04595 csm3; type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3
D JYK00_04590 csm4; type III-A CRISPR-associated RAMP protein Csm4 K19139 csm4; CRISPR-associated protein Csm4
D JYK00_04585 csm5; type III-A CRISPR-associated RAMP protein Csm5 K19140 csm5; CRISPR-associated protein Csm5
D JYK00_01110 cmr1; type III-B CRISPR module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D JYK00_01115 hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2
D JYK00_01125 hypothetical protein K09000 cmr4; CRISPR-associated protein Cmr4
D JYK00_04610 TIGR01897 family CRISPR-associated protein K19143 csx1; CRISPR-associated protein Csx1
D JYK00_07555 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D JYK00_05745 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JYK00_05780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JYK00_03935 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D JYK00_01365 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JYK00_05395 SufS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tfe01504]
D JYK00_01715 rod-binding protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tfe00537]
D JYK00_05670 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tfe03100]
D JYK00_02055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JYK00_08790 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JYK00_05365 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JYK00_00065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_03210 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_05665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_00075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_05350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JYK00_01105 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JYK00_00840 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JYK00_02295 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JYK00_01210 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JYK00_03985 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JYK00_08955 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JYK00_03205 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JYK00_07150 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JYK00_02230 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JYK00_00060 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JYK00_00070 tRNA-His K14226 tRNA-His; tRNA His
D JYK00_02060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JYK00_05620 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_05555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_00620 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_02225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_07130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JYK00_02220 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JYK00_03215 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JYK00_00615 tRNA-Met K14230 tRNA-Met; tRNA Met
D JYK00_02290 tRNA-Met K14230 tRNA-Met; tRNA Met
D JYK00_04810 tRNA-Met K14230 tRNA-Met; tRNA Met
D JYK00_08945 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JYK00_04335 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JYK00_03660 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JYK00_00055 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JYK00_05660 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_06525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_01505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_06660 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JYK00_02270 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JYK00_04685 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JYK00_03625 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JYK00_02255 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JYK00_02265 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JYK00_08950 tRNA-Val K14237 tRNA-Val; tRNA Val
D JYK00_00550 tRNA-Val K14237 tRNA-Val; tRNA Val
D JYK00_03980 tRNA-Val K14237 tRNA-Val; tRNA Val
D JYK00_02065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JYK00_02050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JYK00_02045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JYK00_06490 ffs; signal recognition particle sRNA large type K01983 ffs; SRP RNA
D JYK00_05730 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D JYK00_07125 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JYK00_05485 2Fe-2S iron-sulfur cluster binding domain-containing protein K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D JYK00_09175 NAD/NADP octopine/nopaline dehydrogenase family protein K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D JYK00_00345 NAD(P)/FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D JYK00_01100 peroxiredoxin K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D JYK00_00830 (2Fe-2S) ferredoxin domain-containing protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D JYK00_08075 iron hydrogenase small subunit K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D JYK00_03195 iron hydrogenase small subunit K17997 hydA; iron-hydrogenase subunit alpha [EC:1.12.1.4]
D JYK00_03190 NADH-quinone oxidoreductase subunit NuoF K17998 hydB; iron-hydrogenase subunit beta [EC:1.12.1.4]
D JYK00_03185 nuoE; NADH-quinone oxidoreductase subunit NuoE K17999 hydC; iron-hydrogenase subunit gamma [EC:1.12.1.4]
D JYK00_02420 class II SORL domain-containing protein K05919 dfx; superoxide reductase [EC:1.15.1.2]
D JYK00_00570 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D JYK00_03880 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D JYK00_05950 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JYK00_05685 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JYK00_01705 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JYK00_06000 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JYK00_06105 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JYK00_04205 2-amino-4-ketopentanoate thiolase K21399 ortA; 2-amino-4-ketopentanoate thiolase alpha subunit [EC:2.3.1.263]
D JYK00_04210 PLP-dependent lyase/thiolase K21400 ortB; 2-amino-4-ketopentanoate thiolase beta subunit [EC:2.3.1.263]
D JYK00_04525 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JYK00_05610 glycoside hydrolase family 65 protein K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D JYK00_01955 glycosyltransferase K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D JYK00_08165 glycoside hydrolase family 130 protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D JYK00_01315 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D JYK00_06630 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JYK00_05690 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JYK00_05050 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JYK00_00575 disA; DNA integrity scanning diadenylate cyclase DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D JYK00_01935 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D JYK00_05885 alpha/beta fold hydrolase K24085 estD; esterase [EC:3.1.1.1]
D JYK00_02690 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JYK00_02570 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JYK00_06530 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D JYK00_08805 DUF89 family protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D JYK00_01080 HDIG domain-containing protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D JYK00_03490 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JYK00_08495 N-glycosylase/DNA lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D JYK00_02490 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JYK00_07880 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D JYK00_02355 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D JYK00_03415 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JYK00_09595 SAM-dependent chlorinase/fluorinase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D JYK00_08265 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JYK00_00150 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D JYK00_00155 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D JYK00_01995 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D JYK00_06440 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D JYK00_08440 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D JYK00_04405 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D JYK00_00010 ferredoxin K05337 fer; ferredoxin
D JYK00_00145 RnfABCDGE type electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D JYK00_00140 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D JYK00_00135 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D JYK00_05400 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JYK00_00355 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D JYK00_00340 ferredoxin family protein K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D JYK00_05290 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D JYK00_00850 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D JYK00_06935 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D JYK00_04895 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D JYK00_09720 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JYK00_01460 cold shock domain-containing protein K03704 cspA; cold shock protein
D JYK00_08725 DUF370 domain-containing protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D JYK00_00810 S1 RNA-binding domain-containing protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D JYK00_04165 trigger factor K03545 tig; trigger factor
D JYK00_05015 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JYK00_06870 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D JYK00_04255 OsmC family protein K07397 yhfA; putative redox protein
D JYK00_00365 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D JYK00_02520 reverse transcriptase-like protein K06993 K06993; ribonuclease H-related protein
D JYK00_04870 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D JYK00_07480 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D JYK00_02350 endonuclease K07457 K07457; endonuclease III related protein
D JYK00_03040 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D JYK00_05020 YraN family protein K07460 yraN; putative endonuclease
D JYK00_02745 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JYK00_02760 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JYK00_08035 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D JYK00_06335 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D JYK00_07325 IS256 family transposase K07493 K07493; putative transposase
D JYK00_02935 IS256 family transposase K07493 K07493; putative transposase
D JYK00_02975 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JYK00_05695 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JYK00_08615 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JYK00_09185 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JYK00_09700 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JYK00_06855 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JYK00_07640 DUF4040 domain-containing protein K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
D JYK00_01690 hypothetical protein K07085 K07085; putative transport protein
C 99978 Cell growth
D JYK00_07235 protein jag K06346 jag; spoIIIJ-associated protein
D JYK00_00080 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D JYK00_05160 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D JYK00_01075 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D JYK00_01605 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D JYK00_02480 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
C 99994 Others
D JYK00_06920 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
D JYK00_08670 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JYK00_01095 glucosaminidase domain-containing protein K03796 bax; Bax protein
D JYK00_06595 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D JYK00_08625 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D JYK00_01810 HAD family phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D JYK00_03340 YjjG family noncanonical pyrimidine nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D JYK00_05385 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JYK00_09085 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D JYK00_07490 DUF981 family protein K08980 K08980; putative membrane protein
D JYK00_06430 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D JYK00_06435 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D JYK00_07785 SHOCT domain-containing protein K08982 K08982; putative membrane protein
D JYK00_00320 SHOCT domain-containing protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D JYK00_00215 radical SAM protein K06871 K06871; uncharacterized protein
D JYK00_00220 radical SAM protein K06871 K06871; uncharacterized protein
D JYK00_06225 HD domain-containing protein K06885 K06885; uncharacterized protein
D JYK00_02710 AAA family ATPase K06921 K06921; uncharacterized protein
D JYK00_03115 AAA family ATPase K06921 K06921; uncharacterized protein
D JYK00_03555 ATP-binding protein K06921 K06921; uncharacterized protein
D JYK00_02780 ATP-binding protein K06921 K06921; uncharacterized protein
D JYK00_02675 CoA-binding protein K06929 K06929; uncharacterized protein
D JYK00_08540 DUF296 domain-containing protein K06934 K06934; uncharacterized protein
D JYK00_09340 hypothetical protein K06950 K06950; uncharacterized protein
D JYK00_03545 HD domain-containing protein K06950 K06950; uncharacterized protein
D JYK00_08455 KH domain-containing protein K06960 K06960; uncharacterized protein
D JYK00_06890 zinc metallopeptidase K06973 K06973; uncharacterized protein
D JYK00_09080 cupin domain-containing protein K06995 K06995; uncharacterized protein
D JYK00_08135 MMPL family transporter K07003 K07003; uncharacterized protein
D JYK00_08795 MMPL family transporter K07003 K07003; uncharacterized protein
D JYK00_00950 RND family transporter K07003 K07003; uncharacterized protein
D JYK00_02790 PIN domain-containing protein K07065 K07065; uncharacterized protein
D JYK00_07590 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D JYK00_01340 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D JYK00_01435 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D JYK00_01450 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D JYK00_02100 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D JYK00_02370 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D JYK00_06990 permease K07089 K07089; uncharacterized protein
D JYK00_08885 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JYK00_05450 yfcE; phosphodiesterase K07095 K07095; uncharacterized protein
D JYK00_07045 metallophosphoesterase K07095 K07095; uncharacterized protein
D JYK00_04770 metallophosphoesterase family protein K07095 K07095; uncharacterized protein
D JYK00_02525 metallophosphoesterase K07096 K07096; uncharacterized protein
D JYK00_09510 transcription repressor NadR K07105 K07105; uncharacterized protein
D JYK00_00870 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D JYK00_07540 ATP-binding protein K07133 K07133; uncharacterized protein
D JYK00_02765 ATP-binding protein K07133 K07133; uncharacterized protein
D JYK00_02770 ATP-binding protein K07133 K07133; uncharacterized protein
D JYK00_02775 ATP-binding protein K07133 K07133; uncharacterized protein
D JYK00_02800 ATP-binding protein K07133 K07133; uncharacterized protein
D JYK00_00185 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D JYK00_09545 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D JYK00_07245 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JYK00_00110 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D JYK00_06075 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D JYK00_01385 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D JYK00_06100 DUF190 domain-containing protein K09137 K09137; uncharacterized protein
D JYK00_02140 amrA; AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein
D JYK00_07200 DUF438 domain-containing protein K09155 K09155; uncharacterized protein
D JYK00_07390 UPF0280 family protein K09740 K09740; uncharacterized protein
D JYK00_08360 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D JYK00_08815 DUF342 domain-containing protein K09749 K09749; uncharacterized protein
D JYK00_04940 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D JYK00_09285 DUF2225 domain-containing protein K09766 K09766; uncharacterized protein
D JYK00_02500 YaaR family protein K09770 K09770; uncharacterized protein
D JYK00_04360 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D JYK00_07355 DUF1175 family protein K09934 K09934; uncharacterized protein
D JYK00_08325 DUF4912 domain-containing protein K09942 K09942; uncharacterized protein
D JYK00_05185 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D JYK00_08610 TIGR00153 family protein K07220 K07220; uncharacterized protein
D JYK00_09705 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 22, 2024