+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Thalassovita gelatinovora

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D HFZ77_03490 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HFZ77_04375 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HFZ77_14215 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E HFZ77_13760 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D HFZ77_03025 fructose bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D HFZ77_13425 H-NS histone family protein K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D HFZ77_10865 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HFZ77_14400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D HFZ77_03690 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D HFZ77_15130 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D HFZ77_12035 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D HFZ77_10570 hspQ; heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D HFZ77_16020 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D HFZ77_02865 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D HFZ77_07035 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D HFZ77_05795 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HFZ77_06555 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HFZ77_13070 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HFZ77_13390 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HFZ77_17375 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D HFZ77_18465 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D HFZ77_13540 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D HFZ77_03735 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D HFZ77_03730 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B C Divisome proteins D HFZ77_05340 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D HFZ77_08500 ATP-binding cassette domain-containing protein K09812 ftsE; cell division transport system ATP-binding protein D HFZ77_18320 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HFZ77_10590 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HFZ77_18315 cell division protein FtsL K03586 ftsL; cell division protein FtsL D HFZ77_05345 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D HFZ77_05380 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D HFZ77_08495 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D HFZ77_05335 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HFZ77_02045 cell division protein ZapA K09888 zapA; cell division protein ZapA D HFZ77_09455 cell division protein ZapE K06916 zapE; cell division protein ZapE D HFZ77_03935 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HFZ77_15955 HlyD family efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D HFZ77_17575 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly C Other chromosome partitioning proteins D HFZ77_08515 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HFZ77_08520 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D HFZ77_08525 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D HFZ77_08535 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D HFZ77_08940 AAA family ATPase K03496 parA; chromosome partitioning protein D HFZ77_11545 ParA family protein K03496 parA; chromosome partitioning protein D HFZ77_19125 AAA family ATPase K03496 parA; chromosome partitioning protein D HFZ77_11550 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HFZ77_14435 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HFZ77_19130 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HFZ77_13310 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D HFZ77_17210 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D HFZ77_11535 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HFZ77_11540 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HFZ77_01755 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HFZ77_17150 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D HFZ77_02285 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D HFZ77_18295 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D HFZ77_15665 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024