+D GENES KO #

  KEGG Orthology (KO) - Thermococcus sp. AM4

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tha00010] D TAM4_2347 Glucose-6-phosphate isomerase archaeal K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D TAM4_738 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D TAM4_1728 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D TAM4_1624 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TAM4_1210 Fructose-1,6-bisphosphatase type V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D TAM4_1330 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D TAM4_1537 NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D TAM4_1988 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TAM4_869 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D TAM4_1197 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_204 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_1686 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TAM4_928 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D TAM4_2160 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_1882 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_2188 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1941 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TAM4_1967 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1034 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1433 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_531 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_583 Archaeal succinyl-CoA ligase beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_2077 Acetyl-CoA synthetase (ADP-forming) beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_1410 Glyceraldehyde-3-phosphate: ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] D TAM4_1562 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:tha00020] D TAM4_2160 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_1882 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_2188 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1941 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1911 2-oxoglutarate oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D TAM4_1869 2-oxoglutarate oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D TAM4_2091 2-oxoglutarate oxidoreductase delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D TAM4_1379 L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D TAM4_1288 L(+)-tartrate dehydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D TAM4_1788 Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D TAM4_1562 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:tha00030] D TAM4_2347 Glucose-6-phosphate isomerase archaeal K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D TAM4_133 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D TAM4_82 D-arabino-3-hexulose 6-phosphate formaldehyde lyase / 6-phospho-3-hexuloisomerase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D TAM4_1188 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D TAM4_903 Phosphomannomutase / Phosphoglucosamine mutase K22199 ppm; phosphopentomutase [EC:5.4.2.7] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_1362 Ribokinase K21056 E2.7.1.212; alpha-D-ribose-1-phosphate 5-kinase (ADP) [EC:2.7.1.212] D TAM4_1574 Ribose-1,5-bisphosphate isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D TAM4_93 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TAM4_573 Tungsten-containing ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D TAM4_178 Aldehyde ferredoxin oxidoreductase, domains 2 and 3 protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D TAM4_1594 Tungsten-containing aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D TAM4_501 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D TAM4_1624 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TAM4_1210 Fructose-1,6-bisphosphatase type V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D TAM4_738 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D TAM4_1728 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] C 00040 Pentose and glucuronate interconversions [PATH:tha00040] D TAM4_218 UDP-glucose-6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TAM4_151 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] C 00051 Fructose and mannose metabolism [PATH:tha00051] D TAM4_856 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_2212 Mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TAM4_860 Mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TAM4_785 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] D TAM4_517 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D TAM4_1624 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TAM4_1210 Fructose-1,6-bisphosphatase type V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D TAM4_1330 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:tha00052] D TAM4_665 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TAM4_1420 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TAM4_151 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_902 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D TAM4_535 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23] C 00053 Ascorbate and aldarate metabolism D TAM4_218 UDP-glucose-6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:tha00500] D TAM4_151 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TAM4_616 Glycogen synthase ADP-glucose transglucosylase K20812 glgA; glycogen synthase [EC:2.4.1.242] D TAM4_1516 glycoside hydrolase, family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D TAM4_1498 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D TAM4_1203 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D TAM4_475 Neopullulanase/cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D TAM4_1607 Maltodextrin glucosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D TAM4_15 Alpha-amylase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_2347 Glucose-6-phosphate isomerase archaeal K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tha00520] D TAM4_485 Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TAM4_986 Glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TAM4_134 Phosphomannomutase / Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D TAM4_697 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_151 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TAM4_218 UDP-glucose-6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TAM4_665 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TAM4_1420 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TAM4_2347 Glucose-6-phosphate isomerase archaeal K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D TAM4_2212 Mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TAM4_860 Mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TAM4_856 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:tha00620] D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D TAM4_2160 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_1882 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_2188 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1941 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1686 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TAM4_1231 Acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7] D TAM4_1967 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1034 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1433 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_531 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_583 Archaeal succinyl-CoA ligase beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_2077 Acetyl-CoA synthetase (ADP-forming) beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_2108 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D TAM4_1317 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D TAM4_214 Methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TAM4_1788 Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D TAM4_1379 L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D TAM4_1288 L(+)-tartrate dehydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D TAM4_1562 Phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D TAM4_928 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tha00630] D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_345 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D TAM4_240 Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D TAM4_1527 Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D TAM4_137 Glyoxylate reductase / Hydroxypyruvate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D TAM4_909 D-isomer specific 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D TAM4_1868 Phosphoglycolate phosphatase archaeal type K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D TAM4_1764 Ribulose-1,5-bisphosphate carboxylase Type III K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D TAM4_1390 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TAM4_1931 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TAM4_1744 Glycine dehydrogenase (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D TAM4_1701 Glycine dehydrogenase (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D TAM4_1339 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TAM4_835 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D TAM4_501 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D TAM4_1130 Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit C 00640 Propanoate metabolism [PATH:tha00640] D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TAM4_1967 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1034 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1433 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_531 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_583 Archaeal succinyl-CoA ligase beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_2077 Acetyl-CoA synthetase (ADP-forming) beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D TAM4_1269 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1225 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_345 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D TAM4_240 Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D TAM4_1527 Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] C 00650 Butanoate metabolism [PATH:tha00650] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_214 Methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TAM4_33 methylmalonyl-CoA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D TAM4_386 Methylmalonyl-CoA decarboxylase delta chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D TAM4_1581 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1] D TAM4_1269 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1225 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D TAM4_2160 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_1882 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_2188 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1941 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_592 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism [PATH:tha00562] D TAM4_1800 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D TAM4_329 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D TAM4_5 bifunctional sugar nucleotidyltransferase/CDP-alcohol phosphatidyltransferase synthase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34] D TAM4_1330 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tha00190] D TAM4_526 subunit MbxJ of membrane-bound oxidoreductase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D TAM4_979 subunit MbxK of membrane-bound oxidoreductase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D TAM4_489 subunit MbxL of membrane-bound oxidoreductase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D TAM4_7 putative NADPH-dependent sulfur oxidoreductase NsoABCD subunit A K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D TAM4_363 putative NADPH-dependent sulfur oxidoreductase NsoABCD subunit B K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D TAM4_2302 subunit MbxM of membrane-bound oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D TAM4_690 subunit MbxN of membrane-bound oxidoreductase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D TAM4_661 subunit MbxH' of membrane-bound oxidoreductase K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D TAM4_2000 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D TAM4_2186 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D TAM4_1338 sodium ion-dependent V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D TAM4_1370 sodium ion-dependent V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D TAM4_1347 sodium ion-dependent V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D TAM4_1168 sodium ion-dependent V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D TAM4_1195 sodium ion-dependent V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D TAM4_1328 sodium ion-dependent V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D TAM4_1363 sodium ion-dependent V-type ATP synthase subunit G K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D TAM4_1157 sodium ion-dependent V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D TAM4_1413 sodium ion-dependent V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D TAM4_691 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:tha00710] D TAM4_1764 Ribulose-1,5-bisphosphate carboxylase Type III K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D TAM4_1988 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TAM4_1537 NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D TAM4_1624 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TAM4_133 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D TAM4_1330 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00720 Other carbon fixation pathways [PATH:tha00720] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D TAM4_928 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TAM4_1788 Pyruvate carboxyl transferase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D TAM4_1379 L(+)-tartrate dehydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D TAM4_1288 L(+)-tartrate dehydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_2160 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_1882 2-oxoglutarate oxidoreductase alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D TAM4_2188 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1941 2-oxoglutarate oxidoreductase beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D TAM4_1911 2-oxoglutarate oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D TAM4_1869 2-oxoglutarate oxidoreductase gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D TAM4_2091 2-oxoglutarate oxidoreductase delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D TAM4_345 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D TAM4_1527 Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D TAM4_240 Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D TAM4_582 Carbon monoxide dehydrogenase CooS K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D TAM4_1067 Carbon monoxide dehydrogenase CooS K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D TAM4_766 4Fe-4S cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D TAM4_1054 4Fe-4S cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:tha00680] D TAM4_1130 Fe-S-cluster-containing hydrogenase components 1 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D TAM4_610 Formate dehydrogenase K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6] D TAM4_582 Carbon monoxide dehydrogenase CooS K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D TAM4_1067 Carbon monoxide dehydrogenase CooS K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D TAM4_766 4Fe-4S cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D TAM4_1054 4Fe-4S cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D TAM4_1931 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TAM4_501 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D TAM4_1197 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_204 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_1624 Fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D TAM4_1210 Fructose-1,6-bisphosphatase type V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D TAM4_738 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D TAM4_1728 ADP-dependent phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D TAM4_82 D-arabino-3-hexulose 6-phosphate formaldehyde lyase / 6-phospho-3-hexuloisomerase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D TAM4_928 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TAM4_869 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D TAM4_1348 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TAM4_704 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D TAM4_357 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism [PATH:tha00910] D TAM4_369 NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D TAM4_1390 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TAM4_594 FAD-dependent pyridine nucleotide-disulfideoxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_859 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_608 Glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_1090 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_1238 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:tha00920] D TAM4_1044 iron-sulfur protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D TAM4_506 Phosphoadenosine phosphosulfate reductase family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D TAM4_2197 putative dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D TAM4_114 Sulfhydrogenase II subunit gamma K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] D TAM4_858 Sulfhydrogenase I subunit gamma K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] D TAM4_307 Sulfhydrogenase II subunit beta K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] D TAM4_579 Sulfhydrogenase I subunit beta K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] D TAM4_99 Sulfhydrogenase II subunit alpha K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5] D TAM4_701 Sulfhydrogenase I subunit delta K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5] D TAM4_296 Sulfhydrogenase II subunit delta K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5] D TAM4_262 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tha00061] D TAM4_537 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TAM4_2165 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tha00071] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tha00561] D TAM4_501 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D TAM4_90 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] C 00564 Glycerophospholipid metabolism [PATH:tha00564] D TAM4_83 anaerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D TAM4_1793 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D TAM4_1752 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D TAM4_1506 Glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D TAM4_2030 (S)-3-O-geranylgeranylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D TAM4_1485 (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D TAM4_297 integral membrane protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D TAM4_1982 Digeranylgeranylglycerophospholipid reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism D TAM4_902 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tha00230] D TAM4_903 Phosphomannomutase / Phosphoglucosamine mutase K22199 ppm; phosphopentomutase [EC:5.4.2.7] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_93 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TAM4_621 Amidophosphoribosyltransferase, PurF-like protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D TAM4_774 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D TAM4_553 Phosphoribosylglycinamide formyltransferase 2, PurT-like protein K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D TAM4_973 Phosphoribosylformylglycinamidine synthase synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D TAM4_641 Phosphoribosylformylglycinamidine synthase PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D TAM4_978 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TAM4_888 Phosphoribosylformylglycinamidine cyclo-ligase, PurM-like protein K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D TAM4_632 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D TAM4_716 Phosphoribosylaminoimidazole-succinocarboxamide synthase, PurC-like protein K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D TAM4_1561 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D TAM4_813 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D TAM4_1003 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D TAM4_1948 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D TAM4_493 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D TAM4_303 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D TAM4_1385 Xanthosine/inosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D TAM4_445 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TAM4_993 GMP synthase amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TAM4_95 5'-methylthioadenosine phosphorylase K26211 K26211; guanosine phosphorylase [EC:2.4.2.15] D TAM4_1100 ribonucleoside-diphosphate reductase, coenzyme B12-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TAM4_1111 anaeobic ribonucleotide-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D TAM4_820 Adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D TAM4_1962 Adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D TAM4_496 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D TAM4_270 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D TAM4_927 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_148 Adenylate kinase archaeal type K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_144 conserved hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_1872 shikimate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D TAM4_1678 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D TAM4_658 hit family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D TAM4_325 bis(5'-adenosyl)-triphosphatase HIT family K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D TAM4_1238 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:tha00240] D TAM4_188 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D TAM4_2425 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D TAM4_1240 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D TAM4_1200 Dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D TAM4_1247 Dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D TAM4_384 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D TAM4_217 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D TAM4_1249 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D TAM4_303 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D TAM4_57 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D TAM4_1582 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D TAM4_366 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D TAM4_1948 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D TAM4_1819 Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D TAM4_1838 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D TAM4_1366 Ribokinase K21057 E2.7.1.213; cytidine kinase [EC:2.7.1.213] D TAM4_270 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D TAM4_1111 anaeobic ribonucleotide-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D TAM4_742 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D TAM4_1100 ribonucleoside-diphosphate reductase, coenzyme B12-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TAM4_2346 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D TAM4_1803 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D TAM4_772 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D TAM4_1954 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D TAM4_929 Aliphatic amidase amiE K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tha00250] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_544 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D TAM4_2057 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TAM4_1926 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TAM4_1473 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D TAM4_1476 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D TAM4_312 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D TAM4_1721 Aspartate/tyrosine/aromatic aminotransferase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12] D TAM4_424 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TAM4_496 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D TAM4_1561 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D TAM4_188 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D TAM4_2425 Aspartate carbamoyltransferase regulatory chain (PyrI) K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D TAM4_1269 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1225 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_594 FAD-dependent pyridine nucleotide-disulfideoxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_859 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_608 Glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_1090 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TAM4_369 NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D TAM4_1390 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TAM4_978 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TAM4_485 Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TAM4_986 Glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TAM4_621 Amidophosphoribosyltransferase, PurF-like protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tha00260] D TAM4_378 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D TAM4_156 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TAM4_1634 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TAM4_1931 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TAM4_501 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D TAM4_869 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D TAM4_1348 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TAM4_704 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D TAM4_365 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D TAM4_1945 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D TAM4_1744 Glycine dehydrogenase (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D TAM4_1701 Glycine dehydrogenase (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D TAM4_1339 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TAM4_835 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D TAM4_288 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:tha00270] D TAM4_2471 Archaeal S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D TAM4_1241 S-adenosylmethionine decarboxylase proenzyme prokaryotic class 1B K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D TAM4_795 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TAM4_1279 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D TAM4_634 Pyrimidine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D TAM4_1160 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D TAM4_1825 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D TAM4_1708 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D TAM4_1367 pyridoxal phosphate-dependent deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D TAM4_378 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D TAM4_2167 Ferredoxin K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_1721 Aspartate/tyrosine/aromatic aminotransferase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12] D TAM4_1348 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TAM4_25 putative chromosome partitioning protein ParB-like protein K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226] C 00280 Valine, leucine and isoleucine degradation [PATH:tha00280] D TAM4_1460 Ketoisovalerate oxidoreductase subunit VorA K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7] D TAM4_1398 Ketoisovalerate oxidoreductase subunit VorB K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1406 Ketoisovalerate oxidoreductase subunit VorD K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7] D TAM4_345 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D TAM4_240 Methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D TAM4_1527 Methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_592 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis D TAM4_424 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] C 00300 Lysine biosynthesis [PATH:tha00300] D TAM4_378 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D TAM4_437 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TAM4_1135 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TAM4_1880 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D TAM4_626 multiple substrate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] C 00310 Lysine degradation D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:tha00220] D TAM4_1861 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D TAM4_978 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TAM4_1390 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TAM4_1238 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D TAM4_369 NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_424 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TAM4_1545 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:tha00330] D TAM4_898 Creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D TAM4_904 Pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D TAM4_1831 arginase K01480 speB; agmatinase [EC:3.5.3.11] D TAM4_548 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D TAM4_795 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TAM4_1241 S-adenosylmethionine decarboxylase proenzyme prokaryotic class 1B K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D TAM4_1500 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:tha00340] D TAM4_1676 ATP phosphoribosyltransferase, catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D TAM4_1645 histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D TAM4_1775 Phosphoribosyl-AMP cyclohydrolase / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D TAM4_1848 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D TAM4_1776 Imidazole glycerol phosphate synthase, amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D TAM4_1710 Imidazole glycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D TAM4_1614 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D TAM4_1525 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_983 L-threonine 3-O-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_1682 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:tha00350] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_1525 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_983 L-threonine 3-O-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_357 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00360 Phenylalanine metabolism [PATH:tha00360] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_1525 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_983 L-threonine 3-O-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tha00400] D TAM4_288 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_1525 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_983 L-threonine 3-O-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tha00410] D TAM4_357 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D TAM4_1269 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1225 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1085 Phosphopantothenate synthetase archaeal K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D TAM4_929 Aliphatic amidase amiE K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D TAM4_2014 Metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:tha00450] D TAM4_2010 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D TAM4_1277 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D TAM4_1724 Methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tha00460] D TAM4_1473 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D TAM4_1476 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D TAM4_1931 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tha00470] D TAM4_978 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D TAM4_2057 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TAM4_1926 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TAM4_1880 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tha00480] D TAM4_1917 Lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D TAM4_795 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:tha00511] D TAM4_902 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis [PATH:tha00552] D TAM4_708 bacitracin resistance protein bacA-like protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tha00543] D TAM4_2151 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D TAM4_819 glucosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tha00730] D TAM4_1726 Thiamine biosynthesis protein ThiI-like protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TAM4_1529 Thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TAM4_510 Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D TAM4_1678 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D TAM4_927 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_148 Adenylate kinase archaeal type K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_144 conserved hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tha00740] D TAM4_2081 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D TAM4_1909 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D TAM4_2362 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D TAM4_1942 Riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D TAM4_500 transcriptional regulator, MarR family K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D TAM4_106 riboflavin kinase K14656 ribL; FAD synthetase [EC:2.7.7.2] D TAM4_2025 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tha00750] D TAM4_156 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TAM4_1634 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TAM4_735 Pyridoxine biosynthesis glutamine amidotransferase synthase subunit K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D TAM4_685 Pyridoxine biosynthesis glutamine amidotransferase glutaminase subunit K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:tha00760] D TAM4_544 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D TAM4_756 Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D TAM4_790 Quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D TAM4_1083 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D TAM4_1948 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D TAM4_2357 Nicotinamide-nucleotide adenylyltransferase NadM family K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D TAM4_1434 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D TAM4_2355 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D TAM4_2143 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D TAM4_1412 inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NADkinase) K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D TAM4_1581 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:tha00770] D TAM4_1533 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D TAM4_1233 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D TAM4_1508 Pantoate kinase archaeal K06982 pok; pantoate kinase [EC:2.7.1.169] D TAM4_1085 Phosphopantothenate synthetase archaeal K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D TAM4_1495 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D TAM4_1132 Phosphopantetheine adenylyltransferase type II K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D TAM4_34 Dephospho-CoA kinase archaeal predicted K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D TAM4_775 conserved hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D TAM4_929 Aliphatic amidase amiE K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D TAM4_357 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:tha00780] D TAM4_537 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TAM4_2165 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TAM4_1587 biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tha00785] D TAM4_1267 hypothetical protein K09711 lipS1; lipoyl synthase D TAM4_1759 Biotin synthase-related protein radical SAM superfamily K24689 lipS2; lipoyl synthase D TAM4_855 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D TAM4_1169 lipoate-protein ligase A, N-terminal domain protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D TAM4_1744 Glycine dehydrogenase (glycine cleavage system P1 protein) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D TAM4_1701 Glycine dehydrogenase (glycine cleavage system P2 protein) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D TAM4_1339 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TAM4_835 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tha00790] D TAM4_1536 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D TAM4_2081 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D TAM4_341 Queuosine biosynthesis QueD protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D TAM4_2072 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D TAM4_1276 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D TAM4_1572 GTP cyclohydrolase I type 2 K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D TAM4_77 beta-ribofuranosylaminobenzene 5'-phosphate synthase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D TAM4_1771 beta-ribofuranosylaminobenzene 5'-phosphate synthase K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D TAM4_2119 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D TAM4_1611 7,8 dihydropteroate synthase (methanopterin) K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D TAM4_831 7,8 dihydropteroate synthase (methanopterin) K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D TAM4_2194 6-pyruvoyl-tetrahydropterin synthase K22102 E4.1.2.59; dihydroneopterin phosphate aldolase [EC:4.1.2.59] D TAM4_135 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D TAM4_591 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D TAM4_1214 molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D TAM4_1663 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D TAM4_1767 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D TAM4_250 Molybdopterin cofactor biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D TAM4_1391 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tha00670] D TAM4_1931 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TAM4_1339 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TAM4_1954 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tha00860] D TAM4_1822 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TAM4_2076 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D TAM4_2206 Ferrochelatase protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D TAM4_2088 Radical SAM domain heme biosynthesis protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D TAM4_1930 ATP:cob(I)alamin adenosyltransferase, PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TAM4_1246 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TAM4_683 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D TAM4_688 Adenosylcobinamide-phosphate synthase, CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D TAM4_743 Adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D TAM4_534 GTP:adenosylcobinamide-phosphate guanylyltransferase K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D TAM4_434 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tha00130] D TAM4_2363 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D TAM4_1993 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D TAM4_2025 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D TAM4_2017 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D TAM4_1741 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K18534 K18534; MPBQ/MSBQ methyltransferase [EC:2.1.1.295] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tha00900] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_592 Hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D TAM4_2137 Hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D TAM4_1835 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D TAM4_1700 Isopentenyl phosphate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D TAM4_2182 conserved hypothetical protein K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D TAM4_1938 Aconitate hydratase X predicted K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D TAM4_1818 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D TAM4_2025 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D TAM4_226 Isopentenyl-diphosphate delta-isomerase FMN-dependent K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D TAM4_318 Geranylgeranyl pyrophosphate synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D TAM4_2178 Geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D TAM4_934 Undecaprenyl pyrophosphate synthetase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tha00523] D TAM4_299 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TAM4_181 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TAM4_697 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D TAM4_102 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TAM4_26 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TAM4_308 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:tha01054] D TAM4_2057 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TAM4_1926 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D TAM4_102 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tha00521] D TAM4_546 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TAM4_329 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D TAM4_1800 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D TAM4_299 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TAM4_181 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TAM4_697 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D TAM4_102 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TAM4_26 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TAM4_308 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:tha00525] D TAM4_299 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TAM4_181 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TAM4_697 N-acetylglucosamine-1-phosphate uridyltransferase / Glucosamine-1-phosphate N-acetyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D TAM4_102 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tha00401] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_1525 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_983 L-threonine 3-O-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D TAM4_537 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TAM4_2165 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites D TAM4_2471 Archaeal S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:tha00362] D TAM4_214 Methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TAM4_33 methylmalonyl-CoA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D TAM4_386 Methylmalonyl-CoA decarboxylase delta chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:tha00627] D TAM4_1231 Acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7] D TAM4_2025 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D TAM4_588 hydrolase, 2-haloalkanoic acid dehalogenase family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D TAM4_588 hydrolase, 2-haloalkanoic acid dehalogenase family K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:tha00633] D TAM4_582 Carbon monoxide dehydrogenase CooS K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D TAM4_1067 Carbon monoxide dehydrogenase CooS K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D TAM4_766 4Fe-4S cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D TAM4_1054 4Fe-4S cluster-binding protein CooF K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit D TAM4_1335 Pyruvate:ferredoxin oxidoreductase alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D TAM4_1386 Pyruvate:ferredoxin oxidoreductase beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D TAM4_1107 Ketoisovalerate oxidoreductase subunit VorG K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D TAM4_1397 Pyruvate:ferredoxin oxidoreductase delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tha03020] D TAM4_1722 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D TAM4_1637 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D TAM4_1482 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D TAM4_300 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D TAM4_513 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D TAM4_1013 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D TAM4_823 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D TAM4_1695 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D TAM4_50 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D TAM4_231 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D TAM4_551 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:tha03022] D TAM4_724 Transcription initiation factor iiB K03124 TFIIB; transcription initiation factor TFIIB D TAM4_2370 Transcription initiation factor B K03124 TFIIB; transcription initiation factor TFIIB D TAM4_545 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D TAM4_1052 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D TAM4_1202 Archaeal transcription factor IIE K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D TAM4_942 DNA repair helicase Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tha03010] D TAM4_55 SSU ribosomal protein SAe (S2p) K02967 RP-S2; small subunit ribosomal protein S2 D TAM4_263 SSU ribosomal protein S3e (S3p) K02982 RP-S3; small subunit ribosomal protein S3 D TAM4_223 SSU ribosomal protein S9e (S4p) K02986 RP-S4; small subunit ribosomal protein S4 D TAM4_54 SSU ribosomal protein S2e (S5p) K02988 RP-S5; small subunit ribosomal protein S5 D TAM4_1514 SSU ribosomal protein S5e (S7p) K02992 RP-S7; small subunit ribosomal protein S7 D TAM4_32 SSU ribosomal protein S15Ae (S8p) K02994 RP-S8; small subunit ribosomal protein S8 D TAM4_272 LSU ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D TAM4_862 SSU ribosomal protein S20e (S10p) K02946 RP-S10; small subunit ribosomal protein S10 D TAM4_324 SSU ribosomal protein S14e (S11p) K02948 RP-S11; small subunit ribosomal protein S11 D TAM4_1725 SSU ribosomal protein S23e (S12p) K02950 RP-S12; small subunit ribosomal protein S12 D TAM4_256 SSU ribosomal protein S18e (S13p) K02952 RP-S13; small subunit ribosomal protein S13 D TAM4_53 SSU ribosomal protein S29e (S14p) K02954 RP-S14; small subunit ribosomal protein S14 D TAM4_556 SSU ribosomal protein S13e (S15p) K02956 RP-S15; small subunit ribosomal protein S15 D TAM4_347 SSU ribosomal protein S11e (S17p) K02961 RP-S17; small subunit ribosomal protein S17 D TAM4_254 SSU ribosomal protein S15e (S19p) K02965 RP-S19; small subunit ribosomal protein S19 D TAM4_529 SSU ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D TAM4_73 SSU ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D TAM4_1687 SSU ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D TAM4_538 SSU ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D TAM4_709 SSU ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D TAM4_2069 SSU ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D TAM4_568 SSU ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D TAM4_1551 SSU ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D TAM4_886 SSU ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D TAM4_89 SSU ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D TAM4_949 LSU ribosomal protein L10Ae (L1p) K02863 RP-L1; large subunit ribosomal protein L1 D TAM4_321 LSU ribosomal protein L8e (L2p) K02886 RP-L2; large subunit ribosomal protein L2 D TAM4_335 LSU ribosomal protein L3e (L3p) K02906 RP-L3; large subunit ribosomal protein L3 D TAM4_340 LSU ribosomal protein L11e (L5p) K02931 RP-L5; large subunit ribosomal protein L5 D TAM4_113 LSU ribosomal protein L9e (L6p) K02933 RP-L6; large subunit ribosomal protein L6 D TAM4_890 LSU ribosomal protein P0 (L10p) K02864 RP-L10; large subunit ribosomal protein L10 D TAM4_561 LSU ribosomal protein L12e (L11p) K02867 RP-L11; large subunit ribosomal protein L11 D TAM4_431 LSU ribosomal protein L12a (P1/P2) K02869 RP-L12; large subunit ribosomal protein L12 D TAM4_43 LSU ribosomal protein L13Ae (L13p) K02871 RP-L13; large subunit ribosomal protein L13 D TAM4_79 LSU ribosomal protein L23e (L14p) K02874 RP-L14; large subunit ribosomal protein L14 D TAM4_367 LSU ribosomal protein L27Ae (L15p) K02876 RP-L15; large subunit ribosomal protein L15 D TAM4_319 LSU ribosomal protein L5e (L18p) K02881 RP-L18; large subunit ribosomal protein L18 D TAM4_37 LSU ribosomal protein L17e (L22p) K02890 RP-L22; large subunit ribosomal protein L22 D TAM4_208 LSU ribosomal protein L23Ae (L23p) K02892 RP-L23; large subunit ribosomal protein L23 D TAM4_63 LSU ribosomal protein L26e (L24p) K02895 RP-L24; large subunit ribosomal protein L24 D TAM4_364 LSU ribosomal protein L35e (L29p) K02904 RP-L29; large subunit ribosomal protein L29 D TAM4_1 LSU ribosomal protein L7e (L30p) K02907 RP-L30; large subunit ribosomal protein L30 D TAM4_244 LSU ribosomal protein L1e (L4p) K02930 RP-L4e; large subunit ribosomal protein L4e D TAM4_91 LSU ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D TAM4_239 LSU ribosomal protein L10e (L16p) K02866 RP-L10e; large subunit ribosomal protein L10e D TAM4_2411 LSU ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D TAM4_45 LSU ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D TAM4_22 LSU ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D TAM4_283 LSU ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D TAM4_962 LSU ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D TAM4_52 LSU ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D TAM4_1627 LSU ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D TAM4_1591 LSU ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D TAM4_280 LSU ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D TAM4_132 LSU ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D TAM4_2003 LSU ribosomal protein L35Ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D TAM4_1599 LSU ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D TAM4_842 LSU ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D TAM4_1603 LSU ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D TAM4_184 LSU ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D TAM4_905 LSU ribosomal protein L41E K02928 RP-L41e; large subunit ribosomal protein L41e D TAM4_1718 LSU ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D TAM4_1575 LSU ribosomal protein L18Ae K02944 RP-LX; large subunit ribosomal protein LX D TAM4_2534 Small Subunit Ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TAM4_2532 Large Subunit Ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TAM4_2510 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TAM4_2549 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tha00970] D TAM4_2533 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TAM4_2530 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TAM4_2540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TAM4_2525 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2524 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2511 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2547 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2502 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2527 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TAM4_2550 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TAM4_2516 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D TAM4_2548 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TAM4_2538 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TAM4_2544 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TAM4_2503 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TAM4_2523 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TAM4_2541 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TAM4_2514 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TAM4_2536 tRNA-His K14226 tRNA-His; tRNA His D TAM4_2543 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D TAM4_2522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2531 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2513 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2518 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2501 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TAM4_2517 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TAM4_2509 tRNA-Met K14230 tRNA-Met; tRNA Met D TAM4_2507 tRNA-Met K14230 tRNA-Met; tRNA Met D TAM4_2526 tRNA-Met K14230 tRNA-Met; tRNA Met D TAM4_2542 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D TAM4_2521 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TAM4_2546 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TAM4_2512 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TAM4_2515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2519 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2504 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2506 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TAM4_2508 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TAM4_2528 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TAM4_2537 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D TAM4_2535 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D TAM4_2505 tRNA-Val K14237 tRNA-Val; tRNA Val D TAM4_2539 tRNA-Val K14237 tRNA-Val; tRNA Val D TAM4_2529 tRNA-Val K14237 tRNA-Val; tRNA Val D TAM4_1822 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TAM4_433 Glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D TAM4_791 Glutamyl-tRNA(Gln) amidotransferase, subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D TAM4_1389 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_1622 Alanyl-tRNA synthetase domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_2441 Alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_247 Alanyl-tRNA synthetase domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_289 Aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D TAM4_753 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TAM4_203 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TAM4_1790 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TAM4_713 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TAM4_20 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TAM4_1487 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TAM4_911 possible cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D TAM4_1724 Methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TAM4_923 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TAM4_153 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TAM4_732 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TAM4_101 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D TAM4_484 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TAM4_576 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TAM4_1318 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TAM4_1935 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TAM4_2117 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TAM4_2345 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TAM4_1178 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tha03060] D TAM4_183 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D TAM4_1192 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D TAM4_1149 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D TAM4_193 Signal recognition 54kDa protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TAM4_1762 Signal recognition particle receptor protein FtsY, alpha subunit K03110 ftsY; fused signal recognition particle receptor D TAM4_941 Preprotein translocase, subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D TAM4_562 SRP19 protein K03105 SRP19; signal recognition particle subunit SRP19 D TAM4_676 Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TAM4_94 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D TAM4_1403 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D TAM4_887 signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tha04122] D TAM4_1214 molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D TAM4_135 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D TAM4_2437 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein D TAM4_368 Molybdopterin converting factor, small subunit K03636 moaD; sulfur-carrier protein D TAM4_1131 thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D TAM4_591 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D TAM4_1663 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D TAM4_1726 Thiamine biosynthesis protein ThiI-like protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TAM4_1529 Thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TAM4_580 TtuB K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:tha03050] D TAM4_1578 Proteasome-activating AAA-ATPase (PAN) archaeal K03420 psmR; proteasome regulatory subunit D TAM4_215 Proteasome subunit alpha archaeal K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D TAM4_221 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D TAM4_1486 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:tha03018] D TAM4_606 RNA-binding protein, containing S1 domain K07573 CSL4; exosome complex component CSL4 D TAM4_309 Probable exosome complex RNA-binding protein 1 K03679 RRP4; exosome complex component RRP4 D TAM4_195 exosome complex exonuclease RRP43 K12589 RRP42; exosome complex component RRP42 D TAM4_251 Exosome complex exonuclease 1 K11600 RRP41; exosome complex component RRP41 D TAM4_1197 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_204 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_8 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TAM4_243 hydrolase, metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] B B 09124 Replication and repair C 03030 DNA replication [PATH:tha03030] D TAM4_1737 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D TAM4_1895 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D TAM4_1747 DNA polymerase family B K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D TAM4_2440 Archaeal DNA polymerase II small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D TAM4_1407 Archaeal DNA polymerase II large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D TAM4_323 DNA replication helicase protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D TAM4_2455 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D TAM4_1114 DNA primase large subunit K18882 priL; DNA primase large subunit D TAM4_748 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D TAM4_294 Replication factor C small subunit K04801 rfcS; replication factor C small subunit D TAM4_70 Replication factor C large subunit K04800 rfcL; replication factor C large subunit D TAM4_2204 Flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D TAM4_1751 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:tha03410] D TAM4_2085 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D TAM4_748 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D TAM4_2204 Flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D TAM4_1751 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D TAM4_1883 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D TAM4_56 Uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D TAM4_731 Uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D TAM4_1660 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D TAM4_503 Single-stranded-DNA-specific exonuclease, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:tha03420] D TAM4_942 DNA repair helicase Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D TAM4_748 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D TAM4_1751 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:tha03430] D TAM4_872 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D TAM4_503 Single-stranded-DNA-specific exonuclease, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TAM4_748 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D TAM4_1751 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination [PATH:tha03440] D TAM4_503 Single-stranded-DNA-specific exonuclease, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TAM4_1010 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] C 03450 Non-homologous end-joining D TAM4_2204 Flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D TAM4_736 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D TAM4_645 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tha02010] D TAM4_1791 ABC-type molybdate transport system, periplasmic component K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D TAM4_1505 ABC-type molybdate transport system, permease component K15496 wtpB; molybdate/tungstate transport system permease protein D TAM4_1544 ABC-type molybdate transport system, ATPase component K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D TAM4_627 ABC transporter iron-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D TAM4_2001 ABC-type iron(III) transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D TAM4_778 Ferric iron ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein D TAM4_2118 ABC-type iron(III) transport system, permease component K02011 afuB; iron(III) transport system permease protein D TAM4_600 Putrescine transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TAM4_1958 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TAM4_1850 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein D TAM4_1694 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein D TAM4_1635 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D TAM4_696 Maltose/maltodextrin transport ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D TAM4_967 Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D TAM4_816 ABC-type maltodextrin transport system permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TAM4_647 Maltose/maltodextrin ABC transporter permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TAM4_1713 ABC-type transport system, probable periplasmic component K07335 bmpA; basic membrane protein A and related proteins D TAM4_1526 Ribose ABC transport system permease protein RbsC K23535 nupB; general nucleoside transport system permease protein D TAM4_1615 Ribose ABC transport system permease protein RbsC K23536 nupC; general nucleoside transport system permease protein D TAM4_1688 Ribose ABC transport system ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D TAM4_578 Substrate-specific component NikN of nickel ECF transporter K02009 cbiN; cobalt/nickel transport protein D TAM4_640 Substrate-specific component NikM of nickel ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein D TAM4_850 Transmembrane component NikQ of energizing module of nickel ECF transporter K02008 cbiQ; cobalt/nickel transport system permease protein D TAM4_614 ATPase component NikO of energizing module of nickel ECF transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:tha03070] D TAM4_1192 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D TAM4_1149 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D TAM4_183 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D TAM4_1762 Signal recognition particle receptor protein FtsY, alpha subunit K03110 ftsY; fused signal recognition particle receptor D TAM4_193 Signal recognition 54kDa protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:tha02020] D TAM4_2344 Triphosphoribosyl-dephospho-CoA synthetase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D TAM4_1317 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D TAM4_1390 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_1755 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TAM4_1512 chemotaxis response regulator protein-glutamate methylesterase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TAM4_2000 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D TAM4_2186 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tha02024] D TAM4_1079 pyrolysin related protein K20276 bapA; large repetitive protein D TAM4_1797 conserved hypothetical protein K20276 bapA; large repetitive protein D TAM4_1909 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D TAM4_662 Dipeptide-binding ABC transporter periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TAM4_1378 ABC-type dipeptide/oligopeptide transport system, probable periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TAM4_784 ABC-type Dipeptide transport system periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TAM4_487 Dipeptide transport system permease protein, DppB-like protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_1140 ABC-type oligopeptide transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_1186 ABC-type oligopeptide transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_1369 ABC-type dipeptide/oligopeptide transport system, probable permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_960 ABC-type Dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_558 Dipeptide transport system permease protein, DppC-like protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_1409 ABC-type oligopeptide transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_1263 ABC-type oligopeptide transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_1387 ABC-type oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_597 abc transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_572 Dipeptide transport ATP-binding protein, DppD-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TAM4_943 Mannoside ABC transport system ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein D TAM4_1126 ABC-type oligopeptide transport system, atp-binding protein AppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D TAM4_2472 Mannoside ABC transport system ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein D TAM4_1452 ABC-type oligopeptide transport system, ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D TAM4_442 Dipeptide transport ATP-binding protein, DppF-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D TAM4_183 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D TAM4_1762 Signal recognition particle receptor protein FtsY, alpha subunit K03110 ftsY; fused signal recognition particle receptor D TAM4_193 Signal recognition 54kDa protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tha02030] D TAM4_1755 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TAM4_1512 chemotaxis response regulator protein-glutamate methylesterase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TAM4_1662 hypothetical protein K03410 cheC; chemotaxis protein CheC C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D TAM4_1197 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_204 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:tha04980] D TAM4_1930 ATP:cob(I)alamin adenosyltransferase, PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TAM4_228 periplasmic protein kinase ArgK K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tha01503] D TAM4_2028 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tha01000] C 01001 Protein kinases [BR:tha01001] D TAM4_669 serine/threonine protein kinase, RIO1 family K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D TAM4_1631 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D TAM4_1706 putative RIO-type serine/threonine-protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D TAM4_2327 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_2334 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_1638 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_947 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_2331 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_720 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_499 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D TAM4_1755 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tha01009] D TAM4_266 translation initiation factor aIF-2, beta subunit K03238 EIF2S2; translation initiation factor 2 subunit 2 D TAM4_1708 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D TAM4_707 Protein serine/threonine phosphatase PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D TAM4_2126 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D TAM4_704 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:tha01002] D TAM4_883 archaeal signal peptidase, A24 family K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D TAM4_478 Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D TAM4_809 Hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D TAM4_1208 Hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D TAM4_1439 Pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D TAM4_445 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TAM4_993 GMP synthase amidotransferase subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TAM4_836 Gamma-glutamyl-GABA hydrolase K07010 K07010; putative glutamine amidotransferase D TAM4_621 Amidophosphoribosyltransferase, PurF-like protein K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D TAM4_485 Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TAM4_986 Glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TAM4_312 Asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D TAM4_416 ThiJ/PfpI family protein K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27] D TAM4_1229 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D TAM4_1538 conserved hypothetical protein K07052 K07052; CAAX protease family protein D TAM4_1305 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D TAM4_437 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TAM4_1135 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TAM4_975 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D TAM4_1125 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D TAM4_447 endoglucanase M K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D TAM4_550 Deblocking aminopeptidase K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D TAM4_441 peptidase, M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D TAM4_420 heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D TAM4_528 archemetzincin K06974 amzA; archaemetzincin [EC:3.4.-.-] D TAM4_1971 metallopeptidase-2 K06974 amzA; archaemetzincin [EC:3.4.-.-] D TAM4_565 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D TAM4_119 conserved hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D TAM4_1609 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D TAM4_1096 Alkaline serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-] D TAM4_611 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D TAM4_750 ATP-dependent protease, La Type II K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D TAM4_94 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D TAM4_1403 Signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D TAM4_887 signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D TAM4_1689 protease IV K04773 sppA; protease IV [EC:3.4.21.-] D TAM4_215 Proteasome subunit alpha archaeal K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D TAM4_221 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D TAM4_1486 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D TAM4_1476 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D TAM4_758 zinc-dependent protease, TldD/PmbA family K03592 pmbA; PmbA protein D TAM4_389 zinc-dependent protease, TldD/PmbA family K03592 pmbA; PmbA protein D TAM4_1956 zinc-dependent protease, TldD/PmbA family K03592 pmbA; PmbA protein D TAM4_2392 hypothetical protein K03592 pmbA; PmbA protein D TAM4_1878 zinc-dependent protease, TldD/PmbA family K03568 tldD; TldD protein D TAM4_1826 zinc-dependent protease, TldD/PmbA family K03568 tldD; TldD protein D TAM4_40 zinc-dependent protease, TldD/PmbA family K03568 tldD; TldD protein D TAM4_826 zinc-dependent protease, TldD/PmbA family K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:tha01003] D TAM4_1026 oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D TAM4_672 Oligosaccharyl transferase STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D TAM4_1503 Dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D TAM4_2151 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D TAM4_819 glucosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D TAM4_785 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] C 01005 Lipopolysaccharide biosynthesis proteins C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tha01011] D TAM4_708 bacitracin resistance protein bacA-like protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TAM4_2028 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tha01004] D TAM4_537 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TAM4_2165 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TAM4_1436 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TAM4_1967 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1034 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_1433 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_531 Acetyl-CoA synthetase (ADP-forming) alpha chain K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D TAM4_583 Archaeal succinyl-CoA ligase beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D TAM4_2077 Acetyl-CoA synthetase (ADP-forming) beta chain K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] C 01008 Polyketide biosynthesis proteins [BR:tha01008] D TAM4_2057 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D TAM4_1926 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:tha01006] D TAM4_318 Geranylgeranyl pyrophosphate synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D TAM4_2178 Geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D TAM4_2363 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:tha01007] D TAM4_101 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D TAM4_1822 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TAM4_2345 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TAM4_1178 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TAM4_1487 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TAM4_484 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TAM4_1724 Methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TAM4_732 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TAM4_923 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TAM4_153 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TAM4_289 Aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D TAM4_753 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TAM4_203 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TAM4_1318 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TAM4_1790 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TAM4_20 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TAM4_576 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TAM4_713 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TAM4_1389 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_1622 Alanyl-tRNA synthetase domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_2441 Alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_247 Alanyl-tRNA synthetase domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_1935 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TAM4_2117 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TAM4_911 possible cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D TAM4_36 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TAM4_424 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TAM4_2005 Aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D TAM4_1525 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_983 L-threonine 3-O-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TAM4_365 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D TAM4_1269 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D TAM4_1225 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tha03000] D TAM4_545 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D TAM4_1052 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D TAM4_867 Transcriptional regulator AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D TAM4_127 HTH-type transcriptional regulator Ptr2 K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D TAM4_2213 FurR family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D TAM4_989 transcriptional regulator (ArsR family) K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D TAM4_1944 transcription regulator, ArsR family K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D TAM4_2127 sulfur response regulator SurR K07721 K07721; ArsR family transcriptional regulator D TAM4_554 transcriptional regulatory protein arsR family K07721 K07721; ArsR family transcriptional regulator D TAM4_328 Phosphomethylpyrimidine kinase K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator D TAM4_80 Transcriptional regulator PadR family K10947 K10947; PadR family transcriptional regulator D TAM4_1814 Transcriptional regulator PadR family K10947 K10947; PadR family transcriptional regulator D TAM4_763 Transcriptional regulator PadR family K10947 K10947; PadR family transcriptional regulator D TAM4_711 Iron-dependent repressor, IdeR/DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D TAM4_1587 biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D TAM4_1705 transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D TAM4_771 Transcriptional regulator TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D TAM4_2415 DNA-binding protein tfx K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator D TAM4_2082 transcriptional regulator, XRE family K07728 K07728; putative transcriptional regulator D TAM4_2078 hypothetical protein K07729 K07729; putative transcriptional regulator D TAM4_1049 HTH-domain protein K07731 K07731; putative transcriptional regulator D TAM4_1396 Nickel responsive regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D TAM4_418 transcription regulator, PspC family K03973 pspC; phage shock protein C C 03021 Transcription machinery [BR:tha03021] D TAM4_724 Transcription initiation factor iiB K03124 TFIIB; transcription initiation factor TFIIB D TAM4_2370 Transcription initiation factor B K03124 TFIIB; transcription initiation factor TFIIB D TAM4_545 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D TAM4_1052 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D TAM4_1202 Archaeal transcription factor IIE K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D TAM4_942 DNA repair helicase Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D TAM4_736 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D TAM4_645 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D TAM4_362 ATP/GTP binding protein K24104 GPN; GPN-loop GTPase D TAM4_1521 NusA protein-like protein, archaeal K02600 nusA; transcription termination/antitermination protein NusA D TAM4_1637 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D TAM4_1482 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D TAM4_1722 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D TAM4_300 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D TAM4_1013 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D TAM4_823 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D TAM4_1695 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D TAM4_50 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D TAM4_513 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D TAM4_231 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D TAM4_551 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D TAM4_877 Transcription factor S K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:tha03019] D TAM4_736 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D TAM4_645 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D TAM4_1739 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_1541 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_1860 hypothetical cell division protein K06965 PELO; protein pelota D TAM4_692 Eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D TAM4_769 Translation elongation factor EF-1 alpha subunit K03231 EEF1A; elongation factor 1-alpha D TAM4_606 RNA-binding protein, containing S1 domain K07573 CSL4; exosome complex component CSL4 D TAM4_309 Probable exosome complex RNA-binding protein 1 K03679 RRP4; exosome complex component RRP4 D TAM4_251 Exosome complex exonuclease 1 K11600 RRP41; exosome complex component RRP41 D TAM4_195 exosome complex exonuclease RRP43 K12589 RRP42; exosome complex component RRP42 D TAM4_243 hydrolase, metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D TAM4_8 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TAM4_1197 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_204 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_804 DEAD/DEAH box helicase domain protein K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-] C 03041 Spliceosome [BR:tha03041] D TAM4_174 Zn finger containing protein K06874 ZPR1; zinc finger protein ZPR1 C 03011 Ribosome [BR:tha03011] D TAM4_529 SSU ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D TAM4_73 SSU ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D TAM4_1687 SSU ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D TAM4_538 SSU ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D TAM4_709 SSU ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D TAM4_2069 SSU ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D TAM4_568 SSU ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D TAM4_1551 SSU ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D TAM4_886 SSU ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D TAM4_89 SSU ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D TAM4_244 LSU ribosomal protein L1e (L4p) K02930 RP-L4e; large subunit ribosomal protein L4e D TAM4_91 LSU ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D TAM4_239 LSU ribosomal protein L10e (L16p) K02866 RP-L10e; large subunit ribosomal protein L10e D TAM4_2411 LSU ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D TAM4_45 LSU ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D TAM4_22 LSU ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D TAM4_283 LSU ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D TAM4_962 LSU ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D TAM4_52 LSU ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D TAM4_1627 LSU ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D TAM4_1591 LSU ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D TAM4_280 LSU ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D TAM4_132 LSU ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e D TAM4_2003 LSU ribosomal protein L35Ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D TAM4_1599 LSU ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D TAM4_842 LSU ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D TAM4_1603 LSU ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D TAM4_184 LSU ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D TAM4_905 LSU ribosomal protein L41E K02928 RP-L41e; large subunit ribosomal protein L41e D TAM4_1718 LSU ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D TAM4_55 SSU ribosomal protein SAe (S2p) K02967 RP-S2; small subunit ribosomal protein S2 D TAM4_263 SSU ribosomal protein S3e (S3p) K02982 RP-S3; small subunit ribosomal protein S3 D TAM4_223 SSU ribosomal protein S9e (S4p) K02986 RP-S4; small subunit ribosomal protein S4 D TAM4_54 SSU ribosomal protein S2e (S5p) K02988 RP-S5; small subunit ribosomal protein S5 D TAM4_1514 SSU ribosomal protein S5e (S7p) K02992 RP-S7; small subunit ribosomal protein S7 D TAM4_32 SSU ribosomal protein S15Ae (S8p) K02994 RP-S8; small subunit ribosomal protein S8 D TAM4_272 LSU ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D TAM4_862 SSU ribosomal protein S20e (S10p) K02946 RP-S10; small subunit ribosomal protein S10 D TAM4_324 SSU ribosomal protein S14e (S11p) K02948 RP-S11; small subunit ribosomal protein S11 D TAM4_1725 SSU ribosomal protein S23e (S12p) K02950 RP-S12; small subunit ribosomal protein S12 D TAM4_256 SSU ribosomal protein S18e (S13p) K02952 RP-S13; small subunit ribosomal protein S13 D TAM4_53 SSU ribosomal protein S29e (S14p) K02954 RP-S14; small subunit ribosomal protein S14 D TAM4_556 SSU ribosomal protein S13e (S15p) K02956 RP-S15; small subunit ribosomal protein S15 D TAM4_347 SSU ribosomal protein S11e (S17p) K02961 RP-S17; small subunit ribosomal protein S17 D TAM4_254 SSU ribosomal protein S15e (S19p) K02965 RP-S19; small subunit ribosomal protein S19 D TAM4_949 LSU ribosomal protein L10Ae (L1p) K02863 RP-L1; large subunit ribosomal protein L1 D TAM4_321 LSU ribosomal protein L8e (L2p) K02886 RP-L2; large subunit ribosomal protein L2 D TAM4_335 LSU ribosomal protein L3e (L3p) K02906 RP-L3; large subunit ribosomal protein L3 D TAM4_340 LSU ribosomal protein L11e (L5p) K02931 RP-L5; large subunit ribosomal protein L5 D TAM4_113 LSU ribosomal protein L9e (L6p) K02933 RP-L6; large subunit ribosomal protein L6 D TAM4_890 LSU ribosomal protein P0 (L10p) K02864 RP-L10; large subunit ribosomal protein L10 D TAM4_561 LSU ribosomal protein L12e (L11p) K02867 RP-L11; large subunit ribosomal protein L11 D TAM4_43 LSU ribosomal protein L13Ae (L13p) K02871 RP-L13; large subunit ribosomal protein L13 D TAM4_79 LSU ribosomal protein L23e (L14p) K02874 RP-L14; large subunit ribosomal protein L14 D TAM4_367 LSU ribosomal protein L27Ae (L15p) K02876 RP-L15; large subunit ribosomal protein L15 D TAM4_319 LSU ribosomal protein L5e (L18p) K02881 RP-L18; large subunit ribosomal protein L18 D TAM4_37 LSU ribosomal protein L17e (L22p) K02890 RP-L22; large subunit ribosomal protein L22 D TAM4_208 LSU ribosomal protein L23Ae (L23p) K02892 RP-L23; large subunit ribosomal protein L23 D TAM4_63 LSU ribosomal protein L26e (L24p) K02895 RP-L24; large subunit ribosomal protein L24 D TAM4_364 LSU ribosomal protein L35e (L29p) K02904 RP-L29; large subunit ribosomal protein L29 D TAM4_1 LSU ribosomal protein L7e (L30p) K02907 RP-L30; large subunit ribosomal protein L30 D TAM4_431 LSU ribosomal protein L12a (P1/P2) K02869 RP-L12; large subunit ribosomal protein L12 D TAM4_1575 LSU ribosomal protein L18Ae K02944 RP-LX; large subunit ribosomal protein LX D TAM4_2510 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TAM4_2549 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TAM4_2534 Small Subunit Ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TAM4_2532 Large Subunit Ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tha03009] D TAM4_971 rRNA biogenesis protein Nop5/Nop56 K14564 NOP56; nucleolar protein 56 D TAM4_728 Ribosome biogenesis protein, Nop10 family K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D TAM4_1685 ribosome biogenesis protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D TAM4_1471 ribosome biogenesis protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D TAM4_1702 RNA-binding protein, containing KH domain K06961 KRR1; ribosomal RNA assembly protein D TAM4_1631 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D TAM4_1706 putative RIO-type serine/threonine-protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D TAM4_1872 shikimate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D TAM4_1873 RNase L inhibitor K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D TAM4_991 GTP-binding protein gtp1/obg family K06943 NOG1; nucleolar GTP-binding protein D TAM4_4 Ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D TAM4_651 Ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D TAM4_287 Ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D TAM4_1782 conserved hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D TAM4_1531 Eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D TAM4_857 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3 D TAM4_190 probable exome subunit, conserved hypothetical protein K14574 SDO1; ribosome maturation protein SDO1 D TAM4_1739 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_1541 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_1359 putative RNA-binding protein involved in ribosomal biogenesis contains PUA domain K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D TAM4_1664 GTP-binding protein Era K03595 era; GTPase D TAM4_717 rRNA 2'-O-methyltransferase fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D TAM4_91 LSU ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D TAM4_542 gar1 - like small nucleolar rnp K07569 gar1; RNA-binding protein D TAM4_1521 NusA protein-like protein, archaeal K02600 nusA; transcription termination/antitermination protein NusA D TAM4_2323 Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D TAM4_1548 tRNA/RNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D TAM4_956 tRNA/RNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D TAM4_122 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D TAM4_852 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D TAM4_339 23S rRNA (uracil-5-)-methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D TAM4_205 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D TAM4_8 Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TAM4_1115 GTP-binding protein HflX K03665 hflX; GTPase D TAM4_157 sua5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D TAM4_1984 conserved hypothetical protein K07574 yhbY; RNA-binding protein D TAM4_721 GTP-binding and nucleic acid-binding protein K06942 ychF; ribosome-binding ATPase D TAM4_49 RNA-binding protein FAU-1 K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] C 03016 Transfer RNA biogenesis [BR:tha03016] D TAM4_4 Ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D TAM4_651 Ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D TAM4_287 Ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D TAM4_1507 Ribonuclease P protein component 4 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D TAM4_2092 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D TAM4_1534 Protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D TAM4_1488 conserved hypothetical protein K24956 ZBTB8OS; protein archease D TAM4_769 Translation elongation factor EF-1 alpha subunit K03231 EEF1A; elongation factor 1-alpha D TAM4_1822 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TAM4_576 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TAM4_732 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TAM4_153 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TAM4_1724 Methionyl-tRNA synthetase, MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TAM4_484 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TAM4_289 Aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D TAM4_1389 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_1622 Alanyl-tRNA synthetase domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_2441 Alanyl-tRNA synthetase family protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_247 Alanyl-tRNA synthetase domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TAM4_753 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TAM4_203 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D TAM4_1790 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TAM4_713 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TAM4_20 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TAM4_1487 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TAM4_923 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TAM4_1318 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TAM4_1935 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TAM4_2117 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TAM4_2345 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TAM4_1178 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TAM4_723 conserved hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D TAM4_358 tRNA N6-threonylcarbamoyladenosine 2-methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D TAM4_2149 tRNA N2N2-dimethyl(Guanine2,6-N2)-methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D TAM4_1346 tRNA/RNA cytosine-C5-methylase K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-] D TAM4_706 tRNA (Guanine37-N1) -methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D TAM4_278 methyltransferase K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D TAM4_755 tRNA (adenine57/58-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D TAM4_452 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D TAM4_564 radical SAM family protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D TAM4_598 Met-10+ like protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D TAM4_1220 conserved hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D TAM4_1341 tRNA methylase K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D TAM4_206 tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D TAM4_112 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D TAM4_636 tRNA pseudouridine 55 synthase K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D TAM4_669 serine/threonine protein kinase, RIO1 family K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D TAM4_1151 O-sialoglycoprotein endopeptidase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D TAM4_1122 histone acetyltransferase ELP3 family K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D TAM4_157 sua5 superfamily-related protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D TAM4_854 RNA-binding protein containing THUMP domain K06963 TAN1; tRNA acetyltransferase TAN1 D TAM4_1459 tRNA acetyltransferase TAN1 K06963 TAN1; tRNA acetyltransferase TAN1 D TAM4_846 putative PIN domain protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D TAM4_1025 tRNA nucleotidyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D TAM4_257 tRNA-intron endonuclease K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D TAM4_1030 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D TAM4_1252 RNA:NAD 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D TAM4_101 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D TAM4_911 possible cysteinyl-tRNA synthetase K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D TAM4_1121 tRNA:Cm32/Um32 methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D TAM4_104 tRNA (Uracil54-C5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D TAM4_1784 conserved hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D TAM4_1963 tRNA/RNA cytosine-C5-methylase K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D TAM4_954 tRNA m(1)G methyltransferase K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221] D TAM4_1322 Putative N6-adenine-specific RNA methylase containing THUMP domain K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D TAM4_1865 tRNA-(G10-N2) methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D TAM4_2086 tRNA cytosine methylase Pos56 K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D TAM4_1833 tRNA m5C48-49 methylase K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D TAM4_293 tRNA(U54)-2-thioribothymidine synthetase K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D TAM4_232 conserved hypothetical protein K09119 cgi121; KEOPS complex subunit Cgi121 D TAM4_1652 conserved hypothetical protein K09741 pcc1; KEOPS complex subunit Pcc1 D TAM4_1276 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D TAM4_341 Queuosine biosynthesis QueD protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D TAM4_2072 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D TAM4_2111 archaeosine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D TAM4_1726 Thiamine biosynthesis protein ThiI-like protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TAM4_1529 Thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TAM4_479 nucleic acid-binding protein, containing OB-fold domain K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D TAM4_2097 putative p-loop ATPase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:tha03012] D TAM4_1492 Translation initiation factor 1A K03236 EIF1A; translation initiation factor 1A D TAM4_277 Translation initiation factor SUI1-related protein K03113 EIF1; translation initiation factor 1 D TAM4_893 translation initiation factor 2 alpha subunit K03237 EIF2S1; translation initiation factor 2 subunit 1 D TAM4_266 translation initiation factor aIF-2, beta subunit K03238 EIF2S2; translation initiation factor 2 subunit 2 D TAM4_2209 Eukaryotic translation initiation factor 2 gamma subunit K03242 EIF2S3; translation initiation factor 2 subunit 3 D TAM4_1733 Translation initiation factor 2B, delta subunit K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D TAM4_780 Eukaryotic translation initiation factor eIF-5A K03263 EIF5A; translation initiation factor 5A D TAM4_138 Translation initiation factor aIF-2 K03243 EIF5B; translation initiation factor 5B D TAM4_1531 Eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D TAM4_769 Translation elongation factor EF-1 alpha subunit K03231 EEF1A; elongation factor 1-alpha D TAM4_1431 Translation elongation factor EF-1beta K03232 EEF1B; elongation factor 1-beta D TAM4_1859 Translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D TAM4_694 diphthine synthase, DPH2 subunit K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D TAM4_39 conserved hypothetical protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D TAM4_692 Eukaryotic peptide chain release factor subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D TAM4_668 methylase, putative K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D TAM4_351 Peptidyl-tRNA hydrolase archaeal type K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:tha03110] D TAM4_1352 Thermosome, alpha subunit K22447 cct; archaeal chaperonin D TAM4_436 Thermosome subunit alpha K22447 cct; archaeal chaperonin D TAM4_1650 small heat shock protein K13993 HSP20; HSP20 family protein D TAM4_733 Prefoldin alpha subunit (GimC alpha subunit) K04797 pfdA; prefoldin alpha subunit D TAM4_2134 prefoldin alpha subunit K04797 pfdA; prefoldin alpha subunit D TAM4_1753 Prefoldin beta subunit K04798 pfdB; prefoldin beta subunit D TAM4_1300 [NiFe] hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D TAM4_1659 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] C 04131 Membrane trafficking [BR:tha04131] D TAM4_303 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D TAM4_1739 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_1541 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_676 Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TAM4_941 Preprotein translocase, subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D TAM4_1686 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TAM4_769 Translation elongation factor EF-1 alpha subunit K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:tha04121] D TAM4_184 LSU ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D TAM4_886 SSU ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 03051 Proteasome [BR:tha03051] D TAM4_215 Proteasome subunit alpha archaeal K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D TAM4_221 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D TAM4_1486 Proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D TAM4_1578 Proteasome-activating AAA-ATPase (PAN) archaeal K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:tha03032] D TAM4_748 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D TAM4_2204 Flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D TAM4_1751 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D TAM4_728 Ribosome biogenesis protein, Nop10 family K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D TAM4_1737 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D TAM4_1154 Origin of replication recognition protein K10725 cdc6A; archaeal cell division control protein 6 D TAM4_323 DNA replication helicase protein MCM K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D TAM4_2455 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D TAM4_1114 DNA primase large subunit K18882 priL; DNA primase large subunit D TAM4_939 hypothetical protein K09723 ginS; DNA replication factor GINS D TAM4_2423 hypothetical protein K09723 ginS; DNA replication factor GINS D TAM4_1895 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D TAM4_1747 DNA polymerase family B K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D TAM4_1407 Archaeal DNA polymerase II large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D TAM4_2440 Archaeal DNA polymerase II small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D TAM4_70 Replication factor C large subunit K04800 rfcL; replication factor C large subunit D TAM4_294 Replication factor C small subunit K04801 rfcS; replication factor C small subunit D TAM4_1667 DNA topoisomerase VI subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D TAM4_1494 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D TAM4_1864 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D TAM4_1673 DNA reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:tha03036] D TAM4_74 methylase K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D TAM4_455 Archaeal histone K24450 hmf; DNA-binding protein D TAM4_1674 Archaeal histone K24450 hmf; DNA-binding protein D TAM4_1857 Chromosome partition protein SMC K03529 smc; chromosome segregation protein D TAM4_1915 conserved hypothetical protein K05896 scpA; segregation and condensation protein A D TAM4_1675 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D TAM4_536 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TAM4_370 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TAM4_2028 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D TAM4_222 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D TAM4_391 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D TAM4_13 Plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein D TAM4_1517 Phage integrase/recombinase K04763 xerD; integrase/recombinase XerD D TAM4_1401 Cytosolic Fe-S cluster assembling factor NBP35 K03593 mrp; ATP-binding protein involved in chromosome partitioning D TAM4_1244 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:tha03400] D TAM4_2453 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D TAM4_2085 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D TAM4_748 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen D TAM4_2204 Flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D TAM4_1751 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D TAM4_942 DNA repair helicase Rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D TAM4_333 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D TAM4_56 Uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D TAM4_731 Uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D TAM4_1883 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D TAM4_1660 Endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D TAM4_429 Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D TAM4_503 Single-stranded-DNA-specific exonuclease, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TAM4_872 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D TAM4_1567 DNA double-strand break repair rad50 ATPase K03546 sbcC; DNA repair protein SbcC/Rad50 D TAM4_1515 DNA double-strand break repair protein Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 D TAM4_1010 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TAM4_1903 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D TAM4_1211 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D TAM4_85 DNA repair and recombination protein RadB K04484 radB; DNA repair protein RadB D TAM4_584 archaeal type Holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D TAM4_1809 bipolar DNA helicase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D TAM4_1815 5'-3' nuclease K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] D TAM4_712 DEAD/DEAH box helicase domain protein K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D TAM4_1864 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D TAM4_1813 DEAD/H associated family protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D TAM4_972 Type III restriction enzyme, res subunit family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D TAM4_494 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D TAM4_1100 ribonucleoside-diphosphate reductase, coenzyme B12-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TAM4_336 conserved hypothetical protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:tha03029] D TAM4_4 Ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D TAM4_651 Ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D TAM4_287 Ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D TAM4_1664 GTP-binding protein Era K03595 era; GTPase D TAM4_2345 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TAM4_153 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TAM4_1790 Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D TAM4_484 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TAM4_1401 Cytosolic Fe-S cluster assembling factor NBP35 K03593 mrp; ATP-binding protein involved in chromosome partitioning D TAM4_1244 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tha02000] D TAM4_1791 ABC-type molybdate transport system, periplasmic component K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D TAM4_1505 ABC-type molybdate transport system, permease component K15496 wtpB; molybdate/tungstate transport system permease protein D TAM4_1544 ABC-type molybdate transport system, ATPase component K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D TAM4_627 ABC transporter iron-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D TAM4_2001 ABC-type iron(III) transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D TAM4_778 Ferric iron ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein D TAM4_2118 ABC-type iron(III) transport system, permease component K02011 afuB; iron(III) transport system permease protein D TAM4_600 Putrescine transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TAM4_1958 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D TAM4_1850 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein D TAM4_1694 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein D TAM4_1635 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D TAM4_2121 ABC transporter, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D TAM4_2132 ABC transporter, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D TAM4_2050 taurine transport ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D TAM4_696 Maltose/maltodextrin transport ATP-binding protein MalK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D TAM4_967 Maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D TAM4_816 ABC-type maltodextrin transport system permease component K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TAM4_647 Maltose/maltodextrin ABC transporter permease protein MalG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D TAM4_1713 ABC-type transport system, probable periplasmic component K07335 bmpA; basic membrane protein A and related proteins D TAM4_1526 Ribose ABC transport system permease protein RbsC K23535 nupB; general nucleoside transport system permease protein D TAM4_1615 Ribose ABC transport system permease protein RbsC K23536 nupC; general nucleoside transport system permease protein D TAM4_1688 Ribose ABC transport system ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein D TAM4_1123 Glutamine ABC transporter, periplasmic glutamine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TAM4_1237 glutamine ABC transporter, glutamine-binding periplasmic protein K02029 ABC.PA.P; polar amino acid transport system permease protein D TAM4_1455 polar amino acid ABC transporter, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein D TAM4_1155 glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D TAM4_662 Dipeptide-binding ABC transporter periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TAM4_1378 ABC-type dipeptide/oligopeptide transport system, probable periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TAM4_784 ABC-type Dipeptide transport system periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TAM4_487 Dipeptide transport system permease protein, DppB-like protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_1140 ABC-type oligopeptide transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_1186 ABC-type oligopeptide transport system, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_1369 ABC-type dipeptide/oligopeptide transport system, probable permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_960 ABC-type Dipeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TAM4_558 Dipeptide transport system permease protein, DppC-like protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_1409 ABC-type oligopeptide transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_1263 ABC-type oligopeptide transport system, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_1387 ABC-type oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_597 abc transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TAM4_572 Dipeptide transport ATP-binding protein, DppD-like protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TAM4_943 Mannoside ABC transport system ATP-binding protein 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein D TAM4_1126 ABC-type oligopeptide transport system, atp-binding protein AppD K02031 ddpD; peptide/nickel transport system ATP-binding protein D TAM4_2472 Mannoside ABC transport system ATP-binding protein 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein D TAM4_1452 ABC-type oligopeptide transport system, ATP-binding protein DppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D TAM4_442 Dipeptide transport ATP-binding protein, DppF-like protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D TAM4_1992 Vitamin B12 ABC transporter periplasmic B12-binding component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TAM4_687 ABC-type iron(III)-siderophore transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TAM4_2183 Vitamin B12 ABC transporter permease component K02015 ABC.FEV.P; iron complex transport system permease protein D TAM4_841 iron (III) ABC transporter permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D TAM4_786 ABC-type iron(III)-siderophore transport system ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TAM4_2070 hemin import ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D TAM4_686 Vitamin B12 ABC transporter B12-binding component BtuF K25034 btuF; cobalamin transport system substrate-binding protein D TAM4_61 iron(III) ABC transporter, permease component K25027 btuC; cobalamin transport system permease protein D TAM4_327 iron (III) ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D TAM4_578 Substrate-specific component NikN of nickel ECF transporter K02009 cbiN; cobalt/nickel transport protein D TAM4_850 Transmembrane component NikQ of energizing module of nickel ECF transporter K02008 cbiQ; cobalt/nickel transport system permease protein D TAM4_640 Substrate-specific component NikM of nickel ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein D TAM4_614 ATPase component NikO of energizing module of nickel ECF transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein D TAM4_1477 ABC-type manganese/zinc transporter, periplasmic binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D TAM4_2102 ABC-type manganese/zinc transport system, permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D TAM4_2063 sulfate/thiosulfate import ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D TAM4_2312 hypothetical membrane protein conserved K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_2314 hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_2192 ABC-type sodium efflux pump system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_1082 ABC-2 type transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_1654 putative ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_2012 ABC-2 type transporter family K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_1417 ABC-type multidrug transporter system K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_1817 ABC-type transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D TAM4_796 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_910 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_1062 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_1798 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_818 ABC transporter ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_2089 ABC-type multidrug transport system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_1316 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_1987 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_1569 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_330 ABC-type copper transport ATP-binding protein, putative K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_356 daunorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_992 ABC-tyoe transporter, ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TAM4_2191 molybdate ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TAM4_2383 ABC transporter, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TAM4_1669 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TAM4_1081 IronABC transporter ATP-binding protein, protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D TAM4_920 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D TAM4_745 sodium-driven multidrug efflux pump protein K26939 norM; MATE family, multidrug efflux pump D TAM4_532 sodium-driven multidrug efflux pump protein K26937 dinF; MATE family, multidrug efflux pump D TAM4_879 sodium-driven multidrug efflux pump protein K26937 dinF; MATE family, multidrug efflux pump D TAM4_1272 Calcium-gated potassium channel protein MthK K10716 kch; voltage-gated potassium channel D TAM4_2062 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D TAM4_604 Mg2+ transport protein (MgtE) K07244 K07244; mgtE-like transporter D TAM4_2037 mg2+ transport protein (mgte) K07244 K07244; mgtE-like transporter D TAM4_1633 CrcB protein-like protein K06199 crcB; fluoride exporter D TAM4_192 Antiholin-like protein LrgA K06518 cidA; holin-like protein D TAM4_1786 transporter K16211 malY; maltose/moltooligosaccharide transporter D TAM4_1355 cobalt/zinc/cadmium cation efflux pump protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D TAM4_963 Zinc transporter ZIP family K07238 TC.ZIP; zinc transporter, ZIP family D TAM4_360 hypothetical membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D TAM4_1543 Permease of the drug/metabolite transporter (DMT) superfamily K03298 TC.DME; drug/metabolite transporter, DME family D TAM4_1153 permease, DMT superfamily K03298 TC.DME; drug/metabolite transporter, DME family D TAM4_2139 putative K+-dependent Na+/Ca+ exchanger K07301 yrbG; cation:H+ antiporter D TAM4_876 NhaP type Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D TAM4_1451 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D TAM4_1308 NapA-type Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D TAM4_1805 NapA-type Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D TAM4_302 NapA-4 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter D TAM4_885 Trk-type pottasium transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein D TAM4_1113 Trk-type potassium transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D TAM4_824 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease D TAM4_2162 aromatic amino acid permease K03834 tyrP; tyrosine-specific transport protein D TAM4_467 voltage-gated chloride channel protein K03281 clcA; chloride channel protein, CIC family D TAM4_676 Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D TAM4_477 subunit Mbx(E+F)(fused) of membrane-bound oxidoreductase (Na+/H+ antiporter module subunit) K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D TAM4_2201 subunit of Na+/H+ antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D TAM4_1404 Subunit MbhF of membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D TAM4_1053 Subunit Mbh(E+F)(fused) of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D TAM4_1213 Subunit MbhG of membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D TAM4_918 subunit MbxG of membrane-bound oxidoreductase (Na+/H+ antiporter module subunit) K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D TAM4_2157 subunit of Na+/H+ antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D TAM4_1051 Subunit MbhG of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D TAM4_681 subunit MbxH of membrane-bound oxidoreductase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D TAM4_1957 subunit of Na+/H+ antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D TAM4_1177 Subunit MbhH of membrane-bound energy-converting [Ni,Fe]-hydrogenase K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D TAM4_1048 Subunit MbhH' of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D TAM4_474 subunit MbxA of membrane-bound oxidoreductase (Na+/H+ antiporter module subunit) K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D TAM4_2029 subunit of Na+/H+ antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D TAM4_1289 Subunit MbhA of membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D TAM4_1066 Subunit MbhA of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D TAM4_930 subunit MbxB of membrane-bound oxidoreductase (Na+/H+ antiporter module subunit) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D TAM4_1381 Subunit MbhB of membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D TAM4_1063 Subunit MbhB of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D TAM4_2038 subunit of Na+/H+ antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D TAM4_864 subunit MbxC of membrane-bound oxidoreductase (Na+/H+ antiporter module subunit) K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D TAM4_1977 subunit of Na+/H+ antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D TAM4_1384 Subunit MbhC of membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D TAM4_1028 Subunit MbhC of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D TAM4_2150 permease, auxin efflux carrier family K24180 mleP; malate permease and related proteins D TAM4_1522 integral membrane protein K22736 VIT; vacuolar iron transporter family protein D TAM4_1360 Rubrerythrin K22737 mbfA; erythrin-vacuolar iron transport family protein D TAM4_1236 conserved hypothetical protein K05595 marC; multiple antibiotic resistance protein D TAM4_214 Methylmalonyl-CoA decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TAM4_28 Methylmalonyl-CoA decarboxylase alpha chain K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D TAM4_33 methylmalonyl-CoA decarboxylase gamma chain K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D TAM4_386 Methylmalonyl-CoA decarboxylase delta chain K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D TAM4_1867 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein D TAM4_2136 iron(II) transport protein A K04758 feoA; ferrous iron transport protein A D TAM4_2101 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:tha02044] D TAM4_1585 Flagellin FlaB K07325 flaB; archaeal flagellin FlaB D TAM4_1595 Flagellin FlaB3 K07325 flaB; archaeal flagellin FlaB D TAM4_1683 Flagellin FlaB4 K07325 flaB; archaeal flagellin FlaB D TAM4_1841 Flagellin FlaB5 K07325 flaB; archaeal flagellin FlaB D TAM4_1623 Flagellin FlaC K07822 flaC; archaeal flagellar protein FlaC D TAM4_1709 Flagellin FlaD K07327 flaD; archaeal flagellar protein FlaD D TAM4_1564 Flagellin FlaF K07329 flaF; archaeal flagellar protein FlaF D TAM4_1731 Flagellin FlaG K07330 flaG; archaeal flagellar protein FlaG D TAM4_1636 Flagellin FlaH K07331 flaH; archaeal flagellar protein FlaH D TAM4_1333 Type II/IV secretion system protein kinase K07332 flaI; archaeal flagellar protein FlaI D TAM4_1745 Flagellin FlaI K07332 flaI; archaeal flagellar protein FlaI D TAM4_1137 Bacterial type II secretion system protein F domain protein K07333 flaJ; archaeal flagellar protein FlaJ D TAM4_1504 Flagella accessory protein FlaJ K07333 flaJ; archaeal flagellar protein FlaJ D TAM4_883 archaeal signal peptidase, A24 family K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D TAM4_2346 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D TAM4_1192 Protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D TAM4_1149 Protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D TAM4_1677 conserved hypothetical protein K22228 secG; preprotein translocase subunit SecG D TAM4_183 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY D TAM4_193 Signal recognition 54kDa protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TAM4_1762 Signal recognition particle receptor protein FtsY, alpha subunit K03110 ftsY; fused signal recognition particle receptor D TAM4_941 Preprotein translocase, subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D TAM4_562 SRP19 protein K03105 SRP19; signal recognition particle subunit SRP19 C 02042 Bacterial toxins C 02022 Two-component system [BR:tha02022] D TAM4_1755 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TAM4_1512 chemotaxis response regulator protein-glutamate methylesterase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY C 02035 Bacterial motility proteins [BR:tha02035] D TAM4_1755 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TAM4_1662 hypothetical protein K03410 cheC; chemotaxis protein CheC D TAM4_1512 chemotaxis response regulator protein-glutamate methylesterase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TAM4_1585 Flagellin FlaB K07325 flaB; archaeal flagellin FlaB D TAM4_1595 Flagellin FlaB3 K07325 flaB; archaeal flagellin FlaB D TAM4_1683 Flagellin FlaB4 K07325 flaB; archaeal flagellin FlaB D TAM4_1841 Flagellin FlaB5 K07325 flaB; archaeal flagellin FlaB D TAM4_1623 Flagellin FlaC K07822 flaC; archaeal flagellar protein FlaC D TAM4_1709 Flagellin FlaD K07327 flaD; archaeal flagellar protein FlaD D TAM4_1564 Flagellin FlaF K07329 flaF; archaeal flagellar protein FlaF D TAM4_1731 Flagellin FlaG K07330 flaG; archaeal flagellar protein FlaG D TAM4_1636 Flagellin FlaH K07331 flaH; archaeal flagellar protein FlaH D TAM4_1333 Type II/IV secretion system protein kinase K07332 flaI; archaeal flagellar protein FlaI D TAM4_1745 Flagellin FlaI K07332 flaI; archaeal flagellar protein FlaI D TAM4_1137 Bacterial type II secretion system protein F domain protein K07333 flaJ; archaeal flagellar protein FlaJ D TAM4_1504 Flagella accessory protein FlaJ K07333 flaJ; archaeal flagellar protein FlaJ D TAM4_883 archaeal signal peptidase, A24 family K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tha04812] D TAM4_987 hypothetical protein K07767 KATNA1; katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1] D TAM4_515 Cell division protein FtsH K07767 KATNA1; katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1] D TAM4_1845 phosphomevalonate decarboxylase K06990 MEMO1; MEMO1 family protein D TAM4_536 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TAM4_370 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TAM4_765 Cell division protein FtsZ K22222 cetZ; tubulin-like protein CetZ D TAM4_222 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D TAM4_391 Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D TAM4_13 Plasmid partitioning protein ParA K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:tha04147] D TAM4_1197 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_204 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TAM4_1988 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TAM4_1686 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D TAM4_1305 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D TAM4_2096 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D TAM4_769 Translation elongation factor EF-1 alpha subunit K03231 EEF1A; elongation factor 1-alpha D TAM4_1859 Translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D TAM4_2204 Flap structure-specific endonuclease K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D TAM4_493 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D TAM4_886 SSU ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D TAM4_1739 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_1541 Cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase D TAM4_466 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TAM4_1708 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D TAM4_927 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_148 Adenylate kinase archaeal type K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_144 conserved hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D TAM4_90 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D TAM4_1390 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TAM4_1348 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TAM4_369 NADP-specific glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D TAM4_1330 Triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tha02048] D TAM4_1903 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D TAM4_2056 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D TAM4_2175 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D TAM4_1969 CRISPR-associated negative autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2 D TAM4_2046 CRISPR-associated RecB family exonuclease Cas4a K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TAM4_596 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TAM4_2058 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TAM4_1939 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D TAM4_1621 CRISPR repeat RNA endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D TAM4_1890 CRISPR repeat RNA endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D TAM4_1568 Type I restriction-modification system restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D TAM4_1757 Type I restriction-modification system specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D TAM4_1847 Type I restriction-modification system DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TAM4_1128 transcriptional regulator, AbrB family protein K19156 prlF; antitoxin PrlF D TAM4_2054 transcriptional regulator AbrB family K19156 prlF; antitoxin PrlF D TAM4_2053 RelE/StbE replicon stabilization toxin K06218 relE; mRNA interferase RelE/StbE D TAM4_2444 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE D TAM4_1283 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE D TAM4_2148 addiction module toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE D TAM4_1916 plasmid stabilization system protein, RelE/ParE family K06218 relE; mRNA interferase RelE/StbE D TAM4_418 transcription regulator, PspC family K03973 pspC; phage shock protein C D TAM4_172 Ribbon-helix-helix protein, copG family K07746 parD1_3_4; antitoxin ParD1/3/4 D TAM4_536 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TAM4_370 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TAM4_1822 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TAM4_1856 ribosomal protein S15A isolog K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:tha01504] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tha00537] D TAM4_1305 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tha03100] D TAM4_2533 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TAM4_2530 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TAM4_2540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TAM4_2525 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2524 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2511 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2547 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2502 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TAM4_2527 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TAM4_2550 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TAM4_2516 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D TAM4_2548 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TAM4_2538 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TAM4_2544 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TAM4_2503 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TAM4_2523 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TAM4_2541 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TAM4_2514 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TAM4_2536 tRNA-His K14226 tRNA-His; tRNA His D TAM4_2543 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D TAM4_2522 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2531 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2513 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2518 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TAM4_2501 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TAM4_2517 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TAM4_2509 tRNA-Met K14230 tRNA-Met; tRNA Met D TAM4_2507 tRNA-Met K14230 tRNA-Met; tRNA Met D TAM4_2526 tRNA-Met K14230 tRNA-Met; tRNA Met D TAM4_2542 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D TAM4_2521 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TAM4_2546 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TAM4_2512 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TAM4_2515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2519 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2504 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2506 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TAM4_2545 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TAM4_2508 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TAM4_2528 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TAM4_2537 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D TAM4_2535 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D TAM4_2505 tRNA-Val K14237 tRNA-Val; tRNA Val D TAM4_2539 tRNA-Val K14237 tRNA-Val; tRNA Val D TAM4_2529 tRNA-Val K14237 tRNA-Val; tRNA Val D TAM4_2534 Small Subunit Ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TAM4_2532 Large Subunit Ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TAM4_2510 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TAM4_2549 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D TAM4_2144 Indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D TAM4_624 Indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D TAM4_233 Indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D TAM4_762 Indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D TAM4_1450 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3] D TAM4_984 Coenzyme A-dependent NAD(P)H sulfur oxidoreductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D TAM4_1920 Thiol peroxidase Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D TAM4_1377 Subunit MbhL of membrane-bound energy-converting [Ni,Fe]-hydrogenase (catalytic subunit) K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2] D TAM4_1143 Subunit MbhK of membrane-bound energy-converting [Ni,Fe]-hydrogenase K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2] D TAM4_1158 Subunit MbhJ of membrane-bound energy-converting [Ni,Fe]-hydrogenase K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D TAM4_1892 Superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2] D TAM4_1983 ferritin A K02217 ftnA; ferritin [EC:1.16.3.2] D TAM4_463 glutamate synthase, small subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D TAM4_2460 Dihydroorotate dehydrogenase electron transfer subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D TAM4_285 hypothetical protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D TAM4_924 radical SAM Pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D TAM4_1358 anaerobic ribonucleotide reductase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D TAM4_1046 Subunit MbhH of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D TAM4_1419 Subunit MbhH' of the mbhHH'M(K+L)NJX-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D TAM4_1894 subunit of Na+/H+ antiporter K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D TAM4_1922 subunit of Na+/H+ antiporter K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-] D TAM4_1239 Subunit MbhH of the mbhHH'M(K+L)NJX-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-] D TAM4_1729 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D TAM4_1375 Diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D TAM4_990 carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D TAM4_454 N-acetyltransferase GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D TAM4_660 Deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D TAM4_1077 conserved hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D TAM4_168 archaeosine tRNA-ribosyltransferase type 2 K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-] D TAM4_2103 hypothetical protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D TAM4_832 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182] D TAM4_889 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D TAM4_1949 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D TAM4_1422 chain A, The Macro Domain Is An Adp-Ribose binding module K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D TAM4_141 conserved hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D TAM4_1887 hypothetical deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D TAM4_275 thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D TAM4_1326 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D TAM4_1342 Protein of unknown function DUF91 K07503 nucS; endonuclease [EC:3.1.-.-] D TAM4_462 N-acetylchitobiose deacetylase K22408 dac; N,N'-diacetylchitobiose non-reducing end deacetylase [EC:3.5.1.136] D TAM4_548 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D TAM4_874 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D TAM4_1795 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TAM4_1127 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TAM4_1913 conserved hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D TAM4_1449 YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D TAM4_1523 8-oxoguanine DNA glycosylase, archaeal type K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18] D TAM4_6 RNA 3'-terminal phosphate cyclase K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5] D TAM4_882 Cyclic 2,3-diphosphoglycerate synthase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9] D TAM4_12 conserved hypothetical protein K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] C 99981 Carbohydrate metabolism D TAM4_937 Sugar/maltose fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D TAM4_1091 Ferredoxin K05337 fer; ferredoxin D TAM4_1104 Subunit MbhN of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase K12143 hyfH; hydrogenase-4 component H D TAM4_1139 Subunit MbhM of the mbhHH'M(K+L)NJX-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase K15829 hycD; formate hydrogenlyase subunit 4 D TAM4_1255 Subunit MbhN of membrane-bound energy-converting [Ni,Fe]-hydrogenase K15831 hycF; formate hydrogenlyase subunit 6 D TAM4_1134 Subunit MbhJ of the mbhHH'M(K+L)NJX-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase K15832 hycG; formate hydrogenlyase subunit 7 D TAM4_2458 Subunit MbhD of mbhHM(K+L)NJBCD(E+F)GAH'-encoded membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K14113 ehbD; energy-converting hydrogenase B subunit D D TAM4_2073 subunit of Na+/H+ antiporter K14113 ehbD; energy-converting hydrogenase B subunit D D TAM4_1376 Subunit MbhD of membrane-bound energy-converting [Ni,Fe]-hydrogenase (Na+/H+ antiporter module subunit) K14113 ehbD; energy-converting hydrogenase B subunit D D TAM4_873 subunit MbxD of membrane-bound oxidoreductase (Na+/H+ antiporter module subunit) K14113 ehbD; energy-converting hydrogenase B subunit D C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D TAM4_472 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein D TAM4_1265 hypothetical membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D TAM4_350 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D TAM4_828 transcription regulator K03627 MBF1; putative transcription factor D TAM4_1802 DNA/RNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D TAM4_1789 hypothetical snRNP Sm-like protein K04796 RUXX; small nuclear ribonucleoprotein D TAM4_443 hypothetical protein K07743 K07743; transcriptional regulator D TAM4_1144 conserved hypothetical protein K07745 K07745; transcriptional regulator C 99974 Translation D TAM4_577 Predicted RNA-binding protein K07572 K07572; putative nucleotide binding protein D TAM4_1735 conserved hypothetical protein K07577 K07577; putative mRNA 3-end processing factor D TAM4_456 methyltransferase K07579 K07579; putative methylase D TAM4_1334 conserved hypothetical protein K07580 K07580; Zn-ribbon RNA-binding protein D TAM4_375 conserved hypothetical protein K07581 K07581; RNA-binding protein D TAM4_2371 ATPase of the PP-loop superfamily K07585 K07585; tRNA methyltransferase C 99975 Protein processing D TAM4_1273 HupF/HypC family protein K04653 hypC; hydrogenase expression/formation protein HypC D TAM4_1161 [NiFe] hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D TAM4_1331 [NiFe] hydrogenase metallocenter assembly protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D TAM4_1133 [NiFe] hydrogenase metallocenter assembly protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D TAM4_2163 Hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D TAM4_2039 Thiamine-monophosphate kinase K04655 hypE; hydrogenase expression/formation protein HypE D TAM4_1253 [NiFe] hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF D TAM4_827 OsmC/Ohr family protein K07397 yhfA; putative redox protein D TAM4_169 hypothetical membrane-bound ClpP-class protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D TAM4_2048 integrase/resolvase K07450 K07450; putative resolvase D TAM4_1651 hypothetical protein K07463 K07463; archaea-specific RecJ-like exonuclease D TAM4_1834 TIP49 C-terminal domain family protein K07472 TIP49; TBP-interacting protein D TAM4_589 translin K07477 K07477; translin D TAM4_1996 Putative transposase K07496 K07496; putative transposase D TAM4_2499 transposase, IS607 family K07496 K07496; putative transposase D TAM4_387 Transposase, IS200/IS605 family K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D TAM4_871 Type I restriction enzyme R protein N terminal domain protein K07504 K07504; predicted type IV restriction endonuclease B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D TAM4_2153 low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D TAM4_1264 Probable low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D TAM4_2446 Probable low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D TAM4_1159 D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D TAM4_754 Carbon monoxide dehydrogenase accessory nickel-insertion protein CooC K07321 cooC; CO dehydrogenase maturation factor D TAM4_1059 Carbon monoxide dehydrogenase accessory nickel-insertion protein CooC K07321 cooC; CO dehydrogenase maturation factor D TAM4_1296 Carbon monoxide dehydrogenase accessory nickel-insertion protein CooC K07321 cooC; CO dehydrogenase maturation factor D TAM4_1936 Allophanate hydrolase 2 subunit 1 K06351 kipI; inhibitor of KinA D TAM4_563 hypothetical protein K06384 spoIIM; stage II sporulation protein M C 99993 Cell motility D TAM4_1539 conserved hypothetical protein K09156 cheF; taxis protein CheF C 99995 Signaling proteins D TAM4_981 Carbon starvation protein A K06200 cstA; carbon starvation protein D TAM4_1312 conserved hypothetical protein K07176 K07176; putative serine/threonine protein kinase D TAM4_2193 DNA-binding protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D TAM4_1234 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D TAM4_177 phosphohydrolase, PHP family K04477 ycdX; putative hydrolase D TAM4_245 twitching mobility (PilT) related protein K06865 K06865; ATPase D TAM4_279 hydrolase, HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily D TAM4_1924 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily D TAM4_41 hydrolase, HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily D TAM4_1690 hydrolase, HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily D TAM4_574 Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D TAM4_69 hypothetical protein K07038 K07038; inner membrane protein D TAM4_1421 conserved hypothetical protein K07038 K07038; inner membrane protein D TAM4_180 hydrolase, TatD family K07049 K07049; TatD-related deoxyribonuclease D TAM4_1577 hypothetical protein K07143 K07143; UPF0148 protein D TAM4_834 integral membrane protein K08971 K08971; putative membrane protein D TAM4_1602 hypothetical protein K08975 K08975; putative membrane protein C 99997 Function unknown D TAM4_1262 conserved hypothetical protein K06869 K06869; uncharacterized protein D TAM4_17 archeal serine protease K06870 K06870; uncharacterized protein D TAM4_2021 Deoxyguanosinetriphosphate triphosphohydrolase K06885 K06885; uncharacterized protein D TAM4_1885 Deoxyguanosinetriphosphate triphosphohydrolase K06885 K06885; uncharacterized protein D TAM4_1768 hydrolase, alpha/beta superfamily K06889 K06889; uncharacterized protein D TAM4_1226 archeal ATPase K06921 K06921; uncharacterized protein D TAM4_946 archeal ATPase K06921 K06921; uncharacterized protein D TAM4_2133 Archeal ATPase K06921 K06921; uncharacterized protein D TAM4_1550 Archeal ATPase family protein K06921 K06921; uncharacterized protein D TAM4_197 ATPase K06921 K06921; uncharacterized protein D TAM4_2169 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_1912 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_1656 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_1524 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_47 archaeal ATPase, fused to C-terminal DUF234 domain protein K06921 K06921; uncharacterized protein D TAM4_160 archaeal ATPase, fused to C-terminal DUF234 domain protein K06921 K06921; uncharacterized protein D TAM4_140 archaeal ATPase, fused to C-terminal DUF234 domain protein K06921 K06921; uncharacterized protein D TAM4_274 archeal ATPase family protein K06921 K06921; uncharacterized protein D TAM4_161 archaeal ATPase, fused to C-terminal DUF234 domain protein K06921 K06921; uncharacterized protein D TAM4_48 archaeal ATPase, fused to C-terminal DUF234 domain protein K06921 K06921; uncharacterized protein D TAM4_176 archaeal ATPase, fused to C-terminal DUF234 domain protein K06921 K06921; uncharacterized protein D TAM4_1383 archeal ATPase K06921 K06921; uncharacterized protein D TAM4_1306 archeal ATPase family protein K06921 K06921; uncharacterized protein D TAM4_760 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_2301 motifATP/GTP-binding site motif A (P-loop) K06921 K06921; uncharacterized protein D TAM4_906 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_439 dexx-box ATPase K06921 K06921; uncharacterized protein D TAM4_807 hypothetical protein K06929 K06929; uncharacterized protein D TAM4_2470 hypothetical protein K06933 K06933; uncharacterized protein D TAM4_2409 hypothetical protein K06934 K06934; uncharacterized protein D TAM4_722 Radical SAM domain protein K06935 K06935; uncharacterized protein D TAM4_189 conserved hypothetical protein K06940 K06940; uncharacterized protein D TAM4_1336 conserved hypothetical protein K06940 K06940; uncharacterized protein D TAM4_258 metal-dependent phosphohydrolase, HD superfamily K06950 K06950; uncharacterized protein D TAM4_998 hypothetical protein K06953 K06953; uncharacterized protein D TAM4_734 metallophosphoesterase, calcineurin superfamily K06953 K06953; uncharacterized protein D TAM4_260 conserved hypothetical protein K06971 K06971; uncharacterized protein D TAM4_1357 hypothetical protein K06983 K06983; uncharacterized protein D TAM4_1099 hypothetical protein K07013 K07013; uncharacterized protein D TAM4_1084 hypothetical protein K07022 K07022; uncharacterized protein D TAM4_1772 RNA-metabolising metallo-beta-lactamase family K07041 K07041; uncharacterized protein D TAM4_657 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_552 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_11 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_76 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_1284 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_2398 hypothetical protein K07064 K07064; uncharacterized protein D TAM4_1570 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_353 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_997 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_1804 PilT protein domain protein K07064 K07064; uncharacterized protein D TAM4_1862 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_2380 5'-nucleotidase surE K07064 K07064; uncharacterized protein D TAM4_1668 PilT protein domain protein K07064 K07064; uncharacterized protein D TAM4_486 putative PIN domain protein K07064 K07064; uncharacterized protein D TAM4_895 putative PIN domain protein K07065 K07065; uncharacterized protein D TAM4_782 hypothetical protein, conserved protein associated with acetyl-CoA C-acyltransferase K07068 K07068; uncharacterized protein D TAM4_342 conserved hypothetical protein K07069 K07069; uncharacterized protein D TAM4_191 nucleotidyltransferase K07073 K07073; uncharacterized protein D TAM4_311 nucleotidyltransferase K07075 K07075; uncharacterized protein D TAM4_173 TRAP-type transporter, periplasmic component K07080 K07080; uncharacterized protein D TAM4_936 hypothetical protein K07090 K07090; uncharacterized protein D TAM4_729 conserved hypothetical protein K07090 K07090; uncharacterized protein D TAM4_521 conserved hypothetical protein K07090 K07090; uncharacterized protein D TAM4_314 Phosphodiesterase K07095 K07095; uncharacterized protein D TAM4_444 phosphodiesterase K07095 K07095; uncharacterized protein D TAM4_797 metallophosphoesterase, calcineurin superfamily K07096 K07096; uncharacterized protein D TAM4_1036 Xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein D TAM4_1779 Xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein D TAM4_631 amino acid binding protein K07103 K07103; uncharacterized protein D TAM4_1176 conserved hypothetical protein K07103 K07103; uncharacterized protein D TAM4_2155 conserved hypothetical protein K07108 K07108; uncharacterized protein D TAM4_376 Short-chain alcohol dehydrogenase K07124 K07124; uncharacterized protein D TAM4_2033 Methionine ABC transporter ATP-binding protein K07128 K07128; uncharacterized protein D TAM4_571 Fe-S protein, radical SAM family K07129 K07129; uncharacterized protein D TAM4_1964 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein D TAM4_448 ATPase, AAA superfamily K07133 K07133; uncharacterized protein D TAM4_999 ATPase, AAA superfamily K07133 K07133; uncharacterized protein D TAM4_519 hypothetical protein K07133 K07133; uncharacterized protein D TAM4_1886 dexx-box ATPase K07133 K07133; uncharacterized protein D TAM4_1136 universally conserved protein K07133 K07133; uncharacterized protein D TAM4_1907 dexx-box ATPase K07133 K07133; uncharacterized protein D TAM4_1596 ATPase K07133 K07133; uncharacterized protein D TAM4_1715 ATPase K07133 K07133; uncharacterized protein D TAM4_1681 ATPase K07133 K07133; uncharacterized protein D TAM4_159 ATPase, AAA superfamily K07133 K07133; uncharacterized protein D TAM4_770 ATPase, AAA superfamily K07133 K07133; uncharacterized protein D TAM4_1198 ATPase, AAA superfamily K07133 K07133; uncharacterized protein D TAM4_948 dexx-box ATPase K07133 K07133; uncharacterized protein D TAM4_1089 N-type ATP pyrophosphatase K07134 K07134; uncharacterized protein D TAM4_1655 Putative tRNA binding domain protein K07135 K07135; uncharacterized protein D TAM4_1399 oxidoreductase K07137 K07137; uncharacterized protein D TAM4_1896 conserved hypothetical protein K07158 K07158; uncharacterized protein D TAM4_451 hypothetical protein K07159 K07159; uncharacterized protein D TAM4_187 conserved hypothetical protein K09003 K09003; uncharacterized protein D TAM4_1976 hypothetical protein K09005 K09005; uncharacterized protein D TAM4_458 hypothetical protein K09010 K09010; uncharacterized protein D TAM4_1351 conserved hypothetical protein K09120 K09120; uncharacterized protein D TAM4_1973 conserved hypothetical protein K09122 K09122; uncharacterized protein D TAM4_1402 conserved hypothetical protein K09129 K09129; uncharacterized protein D TAM4_803 conserved hypothetical protein K09130 K09130; uncharacterized protein D TAM4_1794 conserved hypothetical protein K09131 K09131; uncharacterized protein D TAM4_1425 hypothetical protein K09132 K09132; uncharacterized protein D TAM4_654 hypothetical protein K09132 K09132; uncharacterized protein D TAM4_1893 hypothetical protein K09132 K09132; uncharacterized protein D TAM4_1580 hypothetical protein K09132 K09132; uncharacterized protein D TAM4_1313 conserved hypothetical protein K09135 K09135; uncharacterized protein D TAM4_1763 conserved hypothetical protein K09137 K09137; uncharacterized protein D TAM4_884 conserved hypothetical protein K09138 K09138; uncharacterized protein D TAM4_186 Archaeosine cluster protein X K09139 K09139; uncharacterized protein D TAM4_1600 conserved hypothetical protein K09141 K09141; uncharacterized protein D TAM4_1780 conserved hypothetical protein K09145 K09145; uncharacterized protein D TAM4_1004 hypothetical protein K09148 K09148; uncharacterized protein D TAM4_522 hypothetical protein K09149 K09149; uncharacterized protein D TAM4_1204 conserved hypothetical protein K09150 K09150; uncharacterized protein D TAM4_225 conserved hypothetical protein K09152 K09152; uncharacterized protein D TAM4_2349 hypothetical protein K09154 K09154; uncharacterized protein D TAM4_2100 sensory box protein K09155 K09155; uncharacterized protein D TAM4_1999 conserved hypothetical protein K09163 K09163; uncharacterized protein D TAM4_523 conserved hypothetical protein K09713 K09713; uncharacterized protein D TAM4_2368 hypothetical protein K09715 K09715; uncharacterized protein D TAM4_1478 conserved hypothetical protein K09719 K09719; uncharacterized protein D TAM4_1183 conserved hypothetical protein K09721 K09721; uncharacterized protein D TAM4_1592 conserved hypothetical protein K09724 K09724; uncharacterized protein D TAM4_1250 Uncharacterized protein conserved in archaea (DUF531) K09725 K09725; uncharacterized protein D TAM4_851 hypothetical protein K09727 K09727; uncharacterized protein D TAM4_1978 conserved hypothetical protein K09728 K09728; uncharacterized protein D TAM4_1556 conserved hypothetical protein K09730 K09730; uncharacterized protein D TAM4_2181 conserved hypothetical protein K09731 K09731; uncharacterized protein D TAM4_1441 conserved hypothetical protein K09732 K09732; uncharacterized protein D TAM4_533 hypothetical protein K09736 K09736; uncharacterized protein D TAM4_1418 conserved hypothetical protein K09737 K09737; uncharacterized protein D TAM4_2463 hypothetical protein K09738 K09738; uncharacterized protein D TAM4_2337 hypothetical protein K09742 K09742; uncharacterized protein D TAM4_1552 replication factor A complex, RPA32 subunit K09746 K09746; uncharacterized protein D TAM4_1353 Phosphate transport regulator K07220 K07220; uncharacterized protein D TAM4_1345 Phosphate transport regulator K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024