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Transcription Machinery - Thermogladius calderae
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
E TCELL_0060 Transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
E TCELL_0138 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E TCELL_1412 transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIE
E TCELL_0274 Transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E TCELL_0549 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
E TCELL_0385 50S ribosomal protein L24 K15172 SUPT5H; transcription elongation factor SPT5
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
E TCELL_0068 GTPase K24104 GPN; GPN-loop GTPase
E TCELL_1415 GTPase-like protein K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
E TCELL_1412 transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
E TCELL_1412 transcription factor K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
E TCELL_0549 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
E TCELL_0385 50S ribosomal protein L24 K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
E TCELL_0521 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
E TCELL_0518 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
E TCELL_0519 DNA-directed RNA polymerase subunit A' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
E TCELL_0517 DNA-directed RNA polymerase subunit B' K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
E TCELL_0530 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
E TCELL_0548 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
E TCELL_0283 hypothetical protein K03052 rpoG; DNA-directed RNA polymerase subunit G [EC:2.7.7.6]
E TCELL_0516 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
E TCELL_0044 DNA-directed RNA polymerase, subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
E TCELL_0455 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
E TCELL_0534 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
E TCELL_0140 hypothetical protein K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
E TCELL_0303 hypothetical protein K00960 rpo13; DNA-directed RNA polymerase subunit 13 [EC:2.7.7.6]
C Basal transcription factors
D TFB
E TCELL_0060 Transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
E TCELL_0138 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E TCELL_0274 Transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
E TCELL_0457 transcription factor S K03057 tfs; transcription factor S
E TCELL_0266 hypothetical protein K03057 tfs; transcription factor S
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024