+D GENES KO #

  KEGG Orthology (KO) - Thiomicrospira sp. S5

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:thio00010] D AYJ59_10655 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYJ59_10115 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYJ59_05430 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D AYJ59_05895 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYJ59_11900 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYJ59_09175 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYJ59_11915 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYJ59_11910 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AYJ59_02365 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AYJ59_06945 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYJ59_02940 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_11905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_03910 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_07350 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYJ59_08230 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYJ59_08225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_04725 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D AYJ59_04720 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYJ59_09715 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_01165 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] C 00020 Citrate cycle (TCA cycle) [PATH:thio00020] D AYJ59_11460 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AYJ59_07555 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AYJ59_07825 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_04725 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D AYJ59_04720 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D AYJ59_06465 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYJ59_06460 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYJ59_01860 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYJ59_01865 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYJ59_01850 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYJ59_01855 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYJ59_06405 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYJ59_02810 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYJ59_03780 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYJ59_08230 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYJ59_08225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:thio00030] D AYJ59_10115 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYJ59_07205 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYJ59_07210 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D AYJ59_07200 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AYJ59_11875 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AYJ59_11920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_04960 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_04965 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_05465 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_11320 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AYJ59_11900 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYJ59_05895 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYJ59_05430 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:thio00040] D AYJ59_05790 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_10110 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_10120 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYJ59_11875 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AYJ59_07040 hypothetical protein K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:thio00051] D AYJ59_03300 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_04270 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_08910 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05015 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AYJ59_05005 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AYJ59_09460 HAD family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D AYJ59_05430 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D AYJ59_05895 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYJ59_05930 carbohydrate kinase K00846 KHK; ketohexokinase [EC:2.7.1.3] D AYJ59_11900 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYJ59_09175 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYJ59_05010 epimerase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] C 00052 Galactose metabolism [PATH:thio00052] D AYJ59_10120 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_10655 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYJ59_05430 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:thio00053] D AYJ59_05790 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_10110 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_05795 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:thio00500] D AYJ59_03310 HAD family hydrolase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D AYJ59_04280 HAD family hydrolase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D AYJ59_04275 haloacid dehalogenase K07024 SPP; sucrose-6-phosphatase [EC:3.1.3.24] D AYJ59_03305 haloacid dehalogenase K07024 SPP; sucrose-6-phosphatase [EC:3.1.3.24] D AYJ59_03295 alpha-amylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D AYJ59_04265 alpha-amylase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D AYJ59_09450 alpha-amylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D AYJ59_10120 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYJ59_04945 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D AYJ59_10650 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D AYJ59_10630 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AYJ59_10635 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AYJ59_10625 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D AYJ59_10640 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_10655 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYJ59_10115 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYJ59_03300 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_04270 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_08910 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:thio00520] D AYJ59_06765 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AYJ59_03300 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_04270 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_08910 transcriptional regulator K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D AYJ59_04915 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYJ59_09180 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D AYJ59_00985 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AYJ59_11455 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D AYJ59_07335 haloacid dehalogenase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D AYJ59_05130 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D AYJ59_05135 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D AYJ59_08310 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AYJ59_06775 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AYJ59_06080 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AYJ59_06075 N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D AYJ59_06125 hypothetical protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82] D AYJ59_10655 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_10120 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYJ59_05790 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_10110 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_05795 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AYJ59_10115 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYJ59_05015 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AYJ59_05005 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AYJ59_05010 epimerase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D AYJ59_04970 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D AYJ59_06065 aminotransferase DegT K13010 per; perosamine synthetase [EC:2.6.1.102] D AYJ59_04945 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D AYJ59_04950 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D AYJ59_04955 lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D AYJ59_01765 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D AYJ59_04940 oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D AYJ59_10650 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:thio00620] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYJ59_04725 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D AYJ59_04720 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D AYJ59_08230 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYJ59_08225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYJ59_09715 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYJ59_12795 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D AYJ59_12790 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYJ59_02940 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_11905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_03910 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_06925 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYJ59_10980 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYJ59_10985 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYJ59_09225 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYJ59_05315 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D AYJ59_05655 glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AYJ59_11990 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D AYJ59_08710 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D AYJ59_02810 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYJ59_03780 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D AYJ59_06405 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYJ59_05725 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYJ59_07350 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYJ59_02785 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D AYJ59_03755 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D AYJ59_10100 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:thio00630] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYJ59_11460 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AYJ59_07555 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AYJ59_11870 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AYJ59_09840 haloacid dehalogenase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D AYJ59_04795 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D AYJ59_11040 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D AYJ59_11055 ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D AYJ59_04800 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D AYJ59_11035 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D AYJ59_02885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_04205 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_10505 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_06310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_02950 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYJ59_03920 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYJ59_09430 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AYJ59_02860 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYJ59_03830 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYJ59_01775 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:thio00640] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYJ59_12795 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D AYJ59_12790 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_06925 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYJ59_10980 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYJ59_10985 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYJ59_09225 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYJ59_06460 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYJ59_06465 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYJ59_11460 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D AYJ59_07555 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:thio00650] D AYJ59_01860 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYJ59_01865 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYJ59_01850 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYJ59_01855 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYJ59_12045 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_02725 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_03695 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_04725 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D AYJ59_04720 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D AYJ59_04640 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D AYJ59_01835 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_00290 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09970 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:thio00660] D AYJ59_01835 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_00290 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09970 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYJ59_06460 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYJ59_06465 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYJ59_09275 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AYJ59_09270 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AYJ59_09265 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:thio00562] D AYJ59_08265 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AYJ59_10085 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AYJ59_09175 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:thio00190] D AYJ59_09160 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D AYJ59_09155 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D AYJ59_09150 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D AYJ59_09145 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D AYJ59_09140 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D AYJ59_09135 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D AYJ59_09130 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D AYJ59_09125 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D AYJ59_09120 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D AYJ59_09115 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D AYJ59_09110 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D AYJ59_09105 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D AYJ59_09100 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D AYJ59_09095 NADH:ubiquinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D AYJ59_10555 hypothetical protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D AYJ59_01860 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYJ59_01865 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYJ59_01850 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYJ59_01855 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYJ59_08290 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AYJ59_08285 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AYJ59_08280 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AYJ59_02310 cytochrome oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYJ59_02315 cytochrome oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AYJ59_02325 cytochrome C oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AYJ59_00855 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AYJ59_00860 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AYJ59_10010 cytochrome C K08738 CYC; cytochrome c D AYJ59_00965 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AYJ59_00975 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AYJ59_00970 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AYJ59_00960 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AYJ59_00980 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AYJ59_00945 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AYJ59_00955 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AYJ59_00950 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AYJ59_08540 metal-transporting ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D AYJ59_05890 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D AYJ59_02700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYJ59_03670 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYJ59_03050 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYJ59_04020 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:thio00710] D AYJ59_04795 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D AYJ59_11040 rbcL; ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D AYJ59_11055 ribulose 1,5-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D AYJ59_04800 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D AYJ59_11035 ribulose 1,5-bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D AYJ59_11910 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AYJ59_11915 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYJ59_11900 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYJ59_05895 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYJ59_11920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_04960 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_04965 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_05465 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D AYJ59_00645 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D AYJ59_09175 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D AYJ59_11875 ribulose phosphate epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D AYJ59_05725 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] C 00720 Other carbon fixation pathways [PATH:thio00720] D AYJ59_07350 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYJ59_05725 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYJ59_06405 aspA; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D AYJ59_01860 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D AYJ59_01865 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D AYJ59_01850 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D AYJ59_01855 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D AYJ59_06465 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D AYJ59_06460 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D AYJ59_04725 2-oxoglutarate synthase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D AYJ59_04720 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D AYJ59_07825 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYJ59_07555 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D AYJ59_06925 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYJ59_10980 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYJ59_10985 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYJ59_09225 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYJ59_02905 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYJ59_03875 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYJ59_09735 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYJ59_04080 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AYJ59_03110 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AYJ59_12790 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYJ59_12795 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:thio00680] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYJ59_07635 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D AYJ59_06310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYJ59_06945 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYJ59_05725 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D AYJ59_11900 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D AYJ59_05895 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYJ59_05430 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D AYJ59_02890 amidophosphoribosyltransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D AYJ59_03860 amidophosphoribosyltransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D AYJ59_02895 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D AYJ59_03865 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D AYJ59_02900 glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D AYJ59_03870 glutamate synthase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D AYJ59_12795 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] D AYJ59_12790 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYJ59_07350 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D AYJ59_02365 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AYJ59_10020 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYJ59_07320 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYJ59_05255 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:thio00910] D AYJ59_01580 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AYJ59_01585 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AYJ59_01590 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AYJ59_02885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_04205 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_10505 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_02360 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AYJ59_02355 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AYJ59_00350 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D AYJ59_01595 cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D AYJ59_11075 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D AYJ59_05580 carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:thio00920] D AYJ59_01480 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AYJ59_01475 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYJ59_01490 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D AYJ59_10150 sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D AYJ59_10135 sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D AYJ59_10140 thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D AYJ59_10145 thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D AYJ59_09395 bifunctional metallophosphatase/5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D AYJ59_05560 bifunctional metallophosphatase/5'-nucleotidase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D AYJ59_12545 sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC D AYJ59_12540 hypothetical protein K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D AYJ59_02690 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AYJ59_03660 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AYJ59_01460 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D AYJ59_01465 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D AYJ59_07450 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D AYJ59_06425 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D AYJ59_04760 flavocytochrome c sulfide dehydrogenase flavin-binding protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D AYJ59_09300 hypothetical protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D AYJ59_04765 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase D AYJ59_08680 Zn-dependent hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D AYJ59_10075 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYJ59_03015 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AYJ59_03985 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AYJ59_09205 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:thio00061] D AYJ59_06925 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D AYJ59_10980 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D AYJ59_10985 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D AYJ59_09225 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D AYJ59_00520 acyl carrier protein K02078 acpP; acyl carrier protein D AYJ59_09800 acyl carrier protein K02078 acpP; acyl carrier protein D AYJ59_09810 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AYJ59_00585 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AYJ59_09815 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AYJ59_03420 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_00625 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_02450 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_09795 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYJ59_03275 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_04245 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_00610 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_09805 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_03415 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AYJ59_02445 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AYJ59_06875 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYJ59_00530 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYJ59_07375 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:thio00071] D AYJ59_00150 AMP-dependent synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D AYJ59_00365 rubredoxin K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:thio00074] D AYJ59_09645 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AYJ59_00520 acyl carrier protein K02078 acpP; acyl carrier protein D AYJ59_09800 acyl carrier protein K02078 acpP; acyl carrier protein D AYJ59_09810 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:thio00121] D AYJ59_05605 hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:thio00561] D AYJ59_09430 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AYJ59_09715 Zn-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D AYJ59_09820 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AYJ59_04135 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYJ59_03165 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYJ59_11425 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYJ59_07965 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AYJ59_05355 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AYJ59_05345 glycosyl transferase family 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:thio00564] D AYJ59_02385 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D AYJ59_04135 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYJ59_03165 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYJ59_11425 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D AYJ59_07965 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AYJ59_05355 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D AYJ59_07640 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D AYJ59_10750 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AYJ59_00150 AMP-dependent synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D AYJ59_03285 ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D AYJ59_04255 ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D AYJ59_03290 hypothetical protein K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D AYJ59_04260 hypothetical protein K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D AYJ59_06850 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D AYJ59_10105 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AYJ59_08775 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D AYJ59_07535 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D AYJ59_08765 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D AYJ59_08655 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D AYJ59_12035 hypothetical protein K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase C 00565 Ether lipid metabolism [PATH:thio00565] D AYJ59_10750 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D AYJ59_07640 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism [PATH:thio00600] D AYJ59_00165 arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1] D AYJ59_06660 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00590 Arachidonic acid metabolism D AYJ59_10750 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D AYJ59_10750 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:thio00592] D AYJ59_10750 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 01040 Biosynthesis of unsaturated fatty acids D AYJ59_10435 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:thio00230] D AYJ59_06545 nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D AYJ59_04520 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_11320 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D AYJ59_09210 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AYJ59_11010 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D AYJ59_08045 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AYJ59_01180 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D AYJ59_05555 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D AYJ59_08040 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D AYJ59_04100 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AYJ59_03130 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D AYJ59_04095 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AYJ59_03125 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D AYJ59_11885 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D AYJ59_07680 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AYJ59_11005 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AYJ59_12855 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AYJ59_06960 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AYJ59_04515 HAD family hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D AYJ59_05665 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AYJ59_06485 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AYJ59_05275 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AYJ59_10060 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AYJ59_01730 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AYJ59_04860 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D AYJ59_05280 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AYJ59_01150 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D AYJ59_10885 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AYJ59_04480 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AYJ59_07925 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D AYJ59_01120 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AYJ59_02695 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AYJ59_03665 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D AYJ59_07215 (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D AYJ59_06720 CYTH domain protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D AYJ59_07860 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AYJ59_02760 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AYJ59_03730 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AYJ59_01695 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AYJ59_05105 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D AYJ59_01480 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AYJ59_01475 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:thio00240] D AYJ59_08940 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AYJ59_08945 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AYJ59_04040 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AYJ59_03070 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AYJ59_04035 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYJ59_02710 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYJ59_03680 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYJ59_03065 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D AYJ59_02395 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D AYJ59_04030 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D AYJ59_03060 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D AYJ59_02680 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AYJ59_03650 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D AYJ59_07275 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D AYJ59_06835 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D AYJ59_10060 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AYJ59_05805 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D AYJ59_06935 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D AYJ59_07295 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D AYJ59_06960 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AYJ59_05665 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D AYJ59_02760 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AYJ59_03730 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D AYJ59_08155 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D AYJ59_08055 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D AYJ59_10885 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AYJ59_04480 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D AYJ59_09775 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D AYJ59_02625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AYJ59_03595 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AYJ59_10295 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:thio00250] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_09690 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AYJ59_07065 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AYJ59_10180 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYJ59_08770 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AYJ59_12850 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYJ59_07860 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D AYJ59_07680 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D AYJ59_04040 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AYJ59_03070 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D AYJ59_12045 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_02725 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_03695 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_02360 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AYJ59_02355 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D AYJ59_02885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_04205 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_10505 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_08940 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AYJ59_08945 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AYJ59_04915 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYJ59_09210 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:thio00260] D AYJ59_05400 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_10585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_09250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYJ59_06990 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AYJ59_00335 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D AYJ59_07000 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D AYJ59_06310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYJ59_09430 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D AYJ59_02365 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D AYJ59_10020 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYJ59_07320 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYJ59_05255 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_02950 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYJ59_03920 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYJ59_10105 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D AYJ59_02875 aminomethyltransferase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D AYJ59_03845 aminomethyltransferase K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D AYJ59_02865 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D AYJ59_03835 sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D AYJ59_03850 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D AYJ59_02880 hypothetical protein K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D AYJ59_02870 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D AYJ59_03840 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D AYJ59_05490 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AYJ59_09230 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AYJ59_09235 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AYJ59_02105 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AYJ59_12055 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D AYJ59_10595 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D AYJ59_10600 diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D AYJ59_10590 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:thio00270] D AYJ59_10075 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D AYJ59_05600 aminotransferase class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYJ59_12420 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AYJ59_00810 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AYJ59_04085 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AYJ59_03115 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AYJ59_11845 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D AYJ59_11840 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AYJ59_04500 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D AYJ59_01190 5'-methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D AYJ59_06485 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D AYJ59_12170 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AYJ59_01195 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D AYJ59_05400 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_10585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_09250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYJ59_06990 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AYJ59_03015 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AYJ59_03985 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D AYJ59_05650 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D AYJ59_09205 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D AYJ59_08960 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_10515 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_04070 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AYJ59_03100 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AYJ59_04065 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYJ59_03095 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYJ59_05360 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_06715 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D AYJ59_10020 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYJ59_07320 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:thio00280] D AYJ59_08960 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_10515 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_04640 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:thio00290] D AYJ59_05490 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D AYJ59_09275 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D AYJ59_09270 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D AYJ59_09265 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D AYJ59_01835 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_00290 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09970 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYJ59_09960 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AYJ59_10160 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AYJ59_08960 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_10515 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_02785 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D AYJ59_03755 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D AYJ59_10100 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:thio00300] D AYJ59_06990 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D AYJ59_05400 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_10585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_09250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYJ59_05545 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYJ59_08995 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D AYJ59_06805 tetrahydrodipicolinate succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D AYJ59_10520 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYJ59_06795 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AYJ59_11155 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYJ59_02965 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AYJ59_03935 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AYJ59_10340 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AYJ59_10335 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:thio00310] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_12045 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_02725 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_03695 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_05170 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:thio00220] D AYJ59_10525 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D AYJ59_08770 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AYJ59_12850 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYJ59_03330 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D AYJ59_04300 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D AYJ59_03325 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D AYJ59_04295 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D AYJ59_02885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_04205 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_10505 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_08940 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D AYJ59_08945 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_10165 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D AYJ59_10205 argJ; ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D AYJ59_02660 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AYJ59_03630 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D AYJ59_11470 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D AYJ59_10520 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:thio00330] D AYJ59_03230 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D AYJ59_04200 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D AYJ59_08155 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D AYJ59_11835 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AYJ59_11840 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AYJ59_04500 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D AYJ59_11845 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D AYJ59_03025 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AYJ59_03995 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D AYJ59_11485 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AYJ59_10790 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D AYJ59_12485 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_05170 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:thio00340] D AYJ59_08305 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D AYJ59_07865 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D AYJ59_02285 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D AYJ59_12070 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D AYJ59_02295 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D AYJ59_02300 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AYJ59_06105 hypothetical protein K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D AYJ59_02290 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AYJ59_06100 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D AYJ59_02305 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D AYJ59_07310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_10200 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_08300 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:thio00350] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_07310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_10200 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D AYJ59_12045 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_02725 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_03695 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:thio00360] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_07310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_10200 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_05170 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00380 Tryptophan metabolism D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:thio00400] D AYJ59_06355 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYJ59_01160 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D AYJ59_10975 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D AYJ59_12560 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D AYJ59_01155 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D AYJ59_07300 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D AYJ59_05635 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D AYJ59_11865 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYJ59_11860 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AYJ59_11855 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D AYJ59_09240 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D AYJ59_11850 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D AYJ59_09230 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D AYJ59_09235 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AYJ59_02105 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D AYJ59_07315 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D AYJ59_07305 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_07310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_10200 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:thio00410] D AYJ59_05720 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D AYJ59_05705 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:thio00430] D AYJ59_04665 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYJ59_12790 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D AYJ59_12795 hypothetical protein K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:thio00450] D AYJ59_05600 aminotransferase class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYJ59_12420 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AYJ59_00810 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D AYJ59_10245 cysteine sulfinate desulfinase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D AYJ59_09520 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D AYJ59_01480 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AYJ59_01475 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYJ59_08085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:thio00460] D AYJ59_04665 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYJ59_07065 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D AYJ59_06310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:thio00470] D AYJ59_06540 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AYJ59_05170 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AYJ59_10230 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYJ59_00840 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AYJ59_10325 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AYJ59_11155 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D AYJ59_02965 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D AYJ59_03935 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:thio00480] D AYJ59_04665 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYJ59_04070 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AYJ59_03100 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D AYJ59_04065 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYJ59_03095 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYJ59_05360 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D AYJ59_04555 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AYJ59_05945 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AYJ59_06700 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYJ59_12655 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D AYJ59_07825 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D AYJ59_07200 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D AYJ59_07205 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYJ59_12660 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D AYJ59_11835 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AYJ59_11840 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D AYJ59_04500 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:thio00511] D AYJ59_06660 sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00540 Lipopolysaccharide biosynthesis [PATH:thio00540] D AYJ59_06880 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AYJ59_10215 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AYJ59_06870 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AYJ59_08745 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AYJ59_06885 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AYJ59_08465 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AYJ59_10675 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AYJ59_06940 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AYJ59_08365 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AYJ59_08455 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AYJ59_01135 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AYJ59_01130 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AYJ59_10680 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AYJ59_12300 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYJ59_05730 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYJ59_12395 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D AYJ59_10670 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AYJ59_01430 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AYJ59_10660 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AYJ59_10665 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AYJ59_11430 histidinol-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AYJ59_05745 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D AYJ59_05750 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AYJ59_07960 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D AYJ59_05780 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:thio00541] D AYJ59_10120 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D AYJ59_05790 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_10110 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D AYJ59_05795 protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D AYJ59_04920 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYJ59_04935 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AYJ59_04925 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AYJ59_04930 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D AYJ59_04945 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D AYJ59_04950 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D AYJ59_04955 lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1] D AYJ59_01765 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D AYJ59_04940 oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D AYJ59_05015 mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D AYJ59_05005 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D AYJ59_05010 epimerase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] D AYJ59_04970 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D AYJ59_06065 aminotransferase DegT K13010 per; perosamine synthetase [EC:2.6.1.102] D AYJ59_00985 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D AYJ59_06080 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:thio00550] D AYJ59_08310 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AYJ59_06775 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AYJ59_10235 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AYJ59_10325 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AYJ59_10340 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AYJ59_10230 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYJ59_10335 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AYJ59_06845 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AYJ59_04110 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYJ59_03140 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYJ59_10330 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AYJ59_10315 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AYJ59_01705 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYJ59_05185 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYJ59_10345 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AYJ59_05175 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AYJ59_09285 peptidase S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:thio00552] D AYJ59_04110 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYJ59_03140 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:thio00543] D AYJ59_05025 UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D AYJ59_10075 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:thio00730] D AYJ59_12580 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D AYJ59_05905 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AYJ59_12585 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D AYJ59_12595 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D AYJ59_12600 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D AYJ59_06345 hypothetical protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D AYJ59_00375 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AYJ59_09990 GTP-binding protein EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AYJ59_01695 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:thio00740] D AYJ59_06330 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AYJ59_06320 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AYJ59_06335 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D AYJ59_06325 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D AYJ59_10715 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D AYJ59_06545 nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:thio00750] D AYJ59_11400 pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D AYJ59_10945 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D AYJ59_07320 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYJ59_05115 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D AYJ59_09650 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D AYJ59_07000 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:thio00760] D AYJ59_09690 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D AYJ59_08880 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D AYJ59_06495 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D AYJ59_06960 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D AYJ59_10780 nicotinate-nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D AYJ59_06470 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D AYJ59_05380 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D AYJ59_09020 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D AYJ59_12045 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_02725 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D AYJ59_03695 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:thio00770] D AYJ59_01835 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_00290 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09970 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D AYJ59_09965 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D AYJ59_09960 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D AYJ59_10160 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D AYJ59_05700 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D AYJ59_05705 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D AYJ59_03405 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D AYJ59_02435 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D AYJ59_03560 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AYJ59_02590 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D AYJ59_03485 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AYJ59_02515 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D AYJ59_10185 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D AYJ59_09645 ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D AYJ59_08960 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_10515 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_05720 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:thio00780] D AYJ59_02230 malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D AYJ59_03420 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_00625 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_02450 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_09795 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYJ59_03275 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_04245 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_00610 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_09805 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_06875 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYJ59_00530 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYJ59_07375 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AYJ59_02235 pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D AYJ59_02240 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AYJ59_11820 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AYJ59_11890 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D AYJ59_02245 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D AYJ59_03400 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AYJ59_02430 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:thio00785] D AYJ59_05160 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D AYJ59_05155 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_08230 aceE; pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D AYJ59_08225 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D AYJ59_02950 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D AYJ59_03920 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:thio00790] D AYJ59_02800 GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D AYJ59_03770 GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D AYJ59_04130 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AYJ59_03160 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D AYJ59_05695 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D AYJ59_09185 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D AYJ59_10290 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AYJ59_09220 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D AYJ59_06330 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D AYJ59_09790 aminodeoxychorismate synthase, component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D AYJ59_09785 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D AYJ59_02840 short-chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AYJ59_03810 short-chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AYJ59_06375 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AYJ59_09985 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AYJ59_04845 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AYJ59_09280 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AYJ59_08825 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AYJ59_00765 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AYJ59_04455 glutathione synthase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D AYJ59_12535 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AYJ59_12515 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AYJ59_12525 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AYJ59_05570 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D AYJ59_12520 molybdenum cofactor biosynthesis protein MoaA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:thio00670] D AYJ59_10290 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D AYJ59_02840 short-chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AYJ59_03810 short-chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D AYJ59_02905 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYJ59_03875 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYJ59_09735 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D AYJ59_06310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D AYJ59_08045 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D AYJ59_11005 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AYJ59_12245 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AYJ59_12420 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D AYJ59_10295 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D AYJ59_02860 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYJ59_03830 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYJ59_01775 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D AYJ59_04080 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AYJ59_03110 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D AYJ59_05495 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:thio00860] D AYJ59_07175 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYJ59_11335 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D AYJ59_05455 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AYJ59_12555 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AYJ59_12840 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D AYJ59_12835 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D AYJ59_12750 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D AYJ59_00510 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D AYJ59_10690 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D AYJ59_06655 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D AYJ59_02845 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AYJ59_03815 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D AYJ59_01470 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D AYJ59_08440 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D AYJ59_08435 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D AYJ59_12375 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D AYJ59_04840 ferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:thio00130] D AYJ59_01035 hypothetical protein K03181 ubiC; chorismate lyase [EC:4.1.3.40] D AYJ59_00995 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D AYJ59_05520 ubiquinone biosynthesis protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D AYJ59_07330 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D AYJ59_05515 ubiquinone biosynthesis protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D AYJ59_11170 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D AYJ59_06710 hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D AYJ59_08600 hypothetical protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:thio00900] D AYJ59_04640 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D AYJ59_04650 hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D AYJ59_04615 hypothetical protein K00869 MVK; mevalonate kinase [EC:2.7.1.36] D AYJ59_04620 hypothetical protein K00869 MVK; mevalonate kinase [EC:2.7.1.36] D AYJ59_04610 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D AYJ59_04645 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D AYJ59_06380 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AYJ59_11505 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AYJ59_06845 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AYJ59_09980 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D AYJ59_11920 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_04960 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D AYJ59_04965 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:thio00523] D AYJ59_04920 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYJ59_04935 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AYJ59_04925 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AYJ59_04930 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D AYJ59_04935 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:thio00332] D AYJ59_11485 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D AYJ59_10790 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:thio00261] D AYJ59_01480 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D AYJ59_01475 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D AYJ59_05400 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_10585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D AYJ59_09250 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D AYJ59_05545 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D AYJ59_08995 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:thio00521] D AYJ59_10655 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D AYJ59_01935 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D AYJ59_02630 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_03600 phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_05020 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D AYJ59_08265 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AYJ59_10085 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D AYJ59_04920 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYJ59_04935 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D AYJ59_04925 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D AYJ59_04930 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D AYJ59_10655 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:thio00525] D AYJ59_04920 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D AYJ59_04935 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:thio00401] D AYJ59_07305 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_07310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_10200 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D AYJ59_11865 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYJ59_11860 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D AYJ59_09810 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AYJ59_03275 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_04245 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_00610 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_09805 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_07375 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D AYJ59_00520 acyl carrier protein K02078 acpP; acyl carrier protein D AYJ59_09800 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:thio00999] D AYJ59_04085 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AYJ59_03115 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D AYJ59_12560 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D AYJ59_12450 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D AYJ59_09720 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:thio00625] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:thio00633] D AYJ59_08180 NAD(P)H-dependent oxidoreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D AYJ59_08200 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D AYJ59_01365 hydrogenase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D AYJ59_01370 uptake hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D AYJ59_01495 hypothetical protein K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D AYJ59_01500 HupU protein K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation [PATH:thio00791] D AYJ59_03325 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D AYJ59_04295 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D AYJ59_03330 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D AYJ59_04300 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:thio00626] D AYJ59_07630 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:thio03020] D AYJ59_11745 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AYJ59_11740 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AYJ59_11590 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AYJ59_01125 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:thio03010] D AYJ59_07290 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AYJ59_06825 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AYJ59_11680 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AYJ59_11595 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AYJ59_11625 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AYJ59_06515 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AYJ59_11730 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AYJ59_11640 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AYJ59_10890 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AYJ59_11715 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AYJ59_11600 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AYJ59_11735 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AYJ59_11605 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AYJ59_11645 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AYJ59_07710 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AYJ59_09900 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AYJ59_11665 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AYJ59_06520 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AYJ59_11690 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AYJ59_10725 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AYJ59_11760 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AYJ59_11695 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AYJ59_11710 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AYJ59_11705 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AYJ59_11650 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AYJ59_11635 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AYJ59_11750 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AYJ59_06530 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AYJ59_11755 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AYJ59_11765 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AYJ59_10895 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AYJ59_11660 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AYJ59_11615 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AYJ59_11675 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AYJ59_11585 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AYJ59_11630 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AYJ59_09885 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AYJ59_05070 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AYJ59_11500 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AYJ59_11685 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AYJ59_11700 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AYJ59_11655 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AYJ59_11315 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AYJ59_11495 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AYJ59_11670 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AYJ59_11620 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AYJ59_12740 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AYJ59_09825 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AYJ59_03540 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AYJ59_02570 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AYJ59_05065 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AYJ59_02425 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:thio00970] D AYJ59_07180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_02415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_03385 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_04355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_05835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_09745 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_02935 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_03905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_09485 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_10550 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AYJ59_07380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYJ59_07390 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYJ59_07525 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AYJ59_11325 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AYJ59_07185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYJ59_07195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYJ59_11795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYJ59_07190 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYJ59_07530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYJ59_09750 tRNA-His K14226 tRNA-His; tRNA His D AYJ59_02410 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_03380 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_04350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_05830 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_09165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_01275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_07520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_06575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_01270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_08815 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYJ59_08820 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYJ59_09080 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_03205 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_04175 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_11300 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_01280 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AYJ59_10420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYJ59_09740 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYJ59_09490 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYJ59_05410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYJ59_04630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYJ59_11790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYJ59_02440 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYJ59_03410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYJ59_11780 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AYJ59_11800 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AYJ59_06580 tRNA-Val K14237 tRNA-Val; tRNA Val D AYJ59_07385 tRNA-Val K14237 tRNA-Val; tRNA Val D AYJ59_07395 tRNA-Val K14237 tRNA-Val; tRNA Val D AYJ59_07175 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYJ59_05210 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYJ59_05215 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AYJ59_05205 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AYJ59_08730 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AYJ59_05395 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYJ59_08885 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYJ59_11440 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AYJ59_11435 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AYJ59_05055 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AYJ59_09495 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AYJ59_08725 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AYJ59_08085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AYJ59_12245 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D AYJ59_05855 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AYJ59_10805 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYJ59_10710 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AYJ59_09705 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AYJ59_12220 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYJ59_07950 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AYJ59_10045 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AYJ59_05075 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AYJ59_05080 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AYJ59_02400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYJ59_05685 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:thio03060] D AYJ59_11610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYJ59_11775 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYJ59_09170 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYJ59_06625 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AYJ59_06630 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AYJ59_06620 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYJ59_00730 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYJ59_10210 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYJ59_02380 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYJ59_08250 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AYJ59_03435 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02465 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02275 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D AYJ59_02270 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D AYJ59_02265 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D AYJ59_09670 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYJ59_10705 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:thio04122] D AYJ59_11445 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYJ59_10125 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYJ59_07835 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AYJ59_12525 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D AYJ59_12535 cyclic pyranopterin phosphate synthase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D AYJ59_12530 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D AYJ59_11350 molybdopterin-synthase adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D AYJ59_12515 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D AYJ59_05570 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D AYJ59_05905 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AYJ59_12590 hypothetical protein K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:thio03018] D AYJ59_08235 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AYJ59_09850 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AYJ59_06945 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYJ59_07705 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AYJ59_09360 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AYJ59_05920 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AYJ59_01990 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AYJ59_02060 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYJ59_12730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AYJ59_09005 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYJ59_11475 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYJ59_07890 RNA-binding protein hfq K03666 hfq; host factor-I protein D AYJ59_02700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYJ59_03670 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYJ59_03050 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYJ59_04020 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYJ59_05690 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:thio03030] D AYJ59_07750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_12065 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_08690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04705 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_07775 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AYJ59_10540 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AYJ59_09770 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYJ59_10795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYJ59_04550 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYJ59_00705 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYJ59_06535 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AYJ59_03180 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AYJ59_04150 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AYJ59_11550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYJ59_08700 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AYJ59_06890 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AYJ59_00330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYJ59_07050 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:thio03410] D AYJ59_08120 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AYJ59_11405 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AYJ59_12770 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AYJ59_03525 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AYJ59_02555 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AYJ59_12465 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AYJ59_01770 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AYJ59_00330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYJ59_07005 phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYJ59_07050 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:thio03420] D AYJ59_07460 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AYJ59_11565 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AYJ59_04530 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AYJ59_07540 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AYJ59_12720 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AYJ59_00330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYJ59_07050 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:thio03430] D AYJ59_05375 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AYJ59_07900 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AYJ59_12720 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AYJ59_07230 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AYJ59_07235 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AYJ59_07005 phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYJ59_11550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYJ59_07775 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AYJ59_00705 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYJ59_10540 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AYJ59_10795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYJ59_09770 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYJ59_07750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_12065 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_08690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04705 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04550 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYJ59_07050 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:thio03440] D AYJ59_07005 phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYJ59_11550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYJ59_00700 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF D AYJ59_09655 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AYJ59_10530 recR; recombination protein RecR K06187 recR; recombination protein RecR D AYJ59_05385 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AYJ59_00330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYJ59_08870 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AYJ59_08860 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AYJ59_08875 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AYJ59_01040 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AYJ59_07775 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AYJ59_00705 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYJ59_10540 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AYJ59_10795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYJ59_09770 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYJ59_07750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_12065 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_08690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04705 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04550 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYJ59_02200 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:thio02010] D AYJ59_01580 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AYJ59_01585 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AYJ59_01590 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AYJ59_03500 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYJ59_02530 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYJ59_00110 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D AYJ59_03505 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AYJ59_02535 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AYJ59_03510 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AYJ59_02540 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AYJ59_10000 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYJ59_10005 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYJ59_09995 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AYJ59_03245 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AYJ59_04215 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AYJ59_03260 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AYJ59_04230 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AYJ59_03255 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AYJ59_04225 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AYJ59_03250 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AYJ59_04220 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AYJ59_08335 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D AYJ59_08340 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AYJ59_08345 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AYJ59_08330 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D AYJ59_08350 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AYJ59_10465 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYJ59_10500 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AYJ59_10495 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AYJ59_10490 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AYJ59_10270 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D AYJ59_10280 hypothetical protein K09816 znuB; zinc transport system permease protein D AYJ59_10275 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AYJ59_01095 manganese transporter K11707 troA; manganese/zinc/iron transport system substrate-binding protein D AYJ59_01105 zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D AYJ59_01110 iron ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein D AYJ59_01100 peptide transporter K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D AYJ59_07440 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D AYJ59_07435 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AYJ59_04560 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D AYJ59_04565 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AYJ59_08380 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AYJ59_05735 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AYJ59_12120 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:thio03070] D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein D AYJ59_06625 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AYJ59_06630 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AYJ59_11775 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYJ59_09170 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYJ59_11610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYJ59_06620 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYJ59_00730 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYJ59_10210 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYJ59_03435 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02465 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02380 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYJ59_08250 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AYJ59_02275 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D AYJ59_02270 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D AYJ59_02265 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:thio02020] D AYJ59_10475 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AYJ59_10480 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AYJ59_10465 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYJ59_09680 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYJ59_08405 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AYJ59_08400 two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D AYJ59_04400 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AYJ59_04405 cation transporter K07787 cusA; copper/silver efflux system protein D AYJ59_05860 flagellin-like protein K02406 fliC; flagellin D AYJ59_06140 flagellin K02406 fliC; flagellin D AYJ59_06150 flagellin K02406 fliC; flagellin D AYJ59_06160 flagellin K02406 fliC; flagellin D AYJ59_06165 flagellin K02406 fliC; flagellin D AYJ59_09600 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYJ59_06240 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_11360 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_05710 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_11420 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_00710 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AYJ59_07270 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AYJ59_08065 hypothetical protein K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3] D AYJ59_05405 carbon storage regulator K03563 csrA; carbon storage regulator D AYJ59_00900 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYJ59_01615 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D AYJ59_01620 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D AYJ59_01625 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE D AYJ59_01630 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AYJ59_01635 type II secretion system protein K12510 tadB; tight adherence protein B D AYJ59_01640 type II secretion system protein K12511 tadC; tight adherence protein C D AYJ59_06815 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D AYJ59_08795 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AYJ59_08790 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AYJ59_02885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_04205 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_10505 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_12260 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D AYJ59_12265 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D AYJ59_00390 hydrogenase K02584 nifA; Nif-specific regulatory protein D AYJ59_07250 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D AYJ59_00780 hypothetical protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AYJ59_00790 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AYJ59_01500 HupU protein K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D AYJ59_01495 hypothetical protein K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D AYJ59_01505 hypothetical protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D AYJ59_01420 two-component system response regulator K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D AYJ59_01370 uptake hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D AYJ59_01365 hydrogenase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D AYJ59_01360 Ni/Fe hydrogenase 1 b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D AYJ59_09550 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYJ59_00325 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_07220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06590 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_02670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03035 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03090 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03640 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_04005 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_04060 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_08985 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_00425 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09370 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10285 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10305 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10385 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10400 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01600 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06235 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01830 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01985 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_02040 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06350 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09755 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09560 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09580 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09695 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09585 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_05295 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_07855 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09565 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09595 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09905 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYJ59_05990 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_06895 response regulator receiver protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_09385 hypothetical protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D AYJ59_09390 hypothetical protein K14987 fixJ; two-component system, LuxR family, response regulator FixJ D AYJ59_06185 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYJ59_06190 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYJ59_06195 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYJ59_06785 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYJ59_07715 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYJ59_00175 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D AYJ59_00180 hypothetical protein K15012 regA; two-component system, response regulator RegA D AYJ59_08290 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D AYJ59_08285 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AYJ59_08280 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D AYJ59_10010 cytochrome C K08738 CYC; cytochrome c D AYJ59_02310 cytochrome oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D AYJ59_02315 cytochrome oxidase subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D AYJ59_02325 cytochrome C oxidase subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D AYJ59_00855 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D AYJ59_00860 ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein D AYJ59_09855 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D AYJ59_06080 hypothetical protein K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D AYJ59_00115 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D AYJ59_12500 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D AYJ59_08075 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D AYJ59_08080 anti-anti-sigma factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D AYJ59_06370 anti-anti-sigma factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D AYJ59_05980 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:thio04148] D AYJ59_11835 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D AYJ59_08290 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:thio02024] D AYJ59_01195 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D AYJ59_07890 RNA-binding protein hfq K03666 hfq; host factor-I protein D AYJ59_11865 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D AYJ59_11860 anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D AYJ59_06355 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D AYJ59_00780 hypothetical protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AYJ59_00790 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AYJ59_03215 MBL fold metallo-hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D AYJ59_04185 MBL fold metallo-hydrolase K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D AYJ59_12870 hypothetical protein K20276 bapA; large repetitive protein D AYJ59_05225 hypothetical protein K20276 bapA; large repetitive protein D AYJ59_06785 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYJ59_07715 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYJ59_01070 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AYJ59_06320 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D AYJ59_12005 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYJ59_00880 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYJ59_07370 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYJ59_06730 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYJ59_06750 glutathione ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYJ59_07365 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYJ59_07360 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYJ59_06755 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYJ59_07355 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYJ59_00730 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYJ59_11775 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYJ59_09170 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYJ59_11610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYJ59_06620 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYJ59_10210 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYJ59_03435 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02465 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02380 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYJ59_08250 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:thio02030] D AYJ59_00325 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_07220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06590 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_02670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03035 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03090 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03640 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_04005 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_04060 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_08985 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_00425 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09370 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10285 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10305 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10385 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10400 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01600 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06235 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01830 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01985 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_02040 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06350 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09755 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09585 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_05295 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_09560 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09580 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09695 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_07855 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09565 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09595 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09905 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09590 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AYJ59_09545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYJ59_05990 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_06895 response regulator receiver protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_05290 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D AYJ59_09550 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYJ59_06210 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AYJ59_06255 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AYJ59_06260 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AYJ59_06240 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_11360 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_05710 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_11420 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_05715 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_06245 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYJ59_11355 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_11410 hypothetical protein K02557 motB; chemotaxis protein MotB D AYJ59_11415 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:thio02040] D AYJ59_06200 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AYJ59_06205 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AYJ59_06210 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AYJ59_06215 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AYJ59_06220 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AYJ59_06225 hypothetical protein K02413 fliJ; flagellar protein FliJ D AYJ59_06230 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AYJ59_06250 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D AYJ59_06255 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AYJ59_06260 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AYJ59_09640 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D AYJ59_09635 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AYJ59_09630 EscS/YscS/HrcS family type III secretion system export apparatus protein K02420 fliQ; flagellar biosynthesis protein FliQ D AYJ59_09625 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AYJ59_09615 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AYJ59_09620 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AYJ59_05985 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AYJ59_06000 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AYJ59_06005 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AYJ59_06010 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AYJ59_06015 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AYJ59_06020 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AYJ59_06025 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AYJ59_06030 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D AYJ59_06035 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D AYJ59_06040 flagellar biosynthesis K02395 flgJ; peptidoglycan hydrolase FlgJ D AYJ59_06045 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AYJ59_06050 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D AYJ59_05960 hypothetical protein K09860 flgP; outer membrane protein FlgP D AYJ59_05860 flagellin-like protein K02406 fliC; flagellin D AYJ59_06140 flagellin K02406 fliC; flagellin D AYJ59_06150 flagellin K02406 fliC; flagellin D AYJ59_06160 flagellin K02406 fliC; flagellin D AYJ59_06165 flagellin K02406 fliC; flagellin D AYJ59_06170 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D AYJ59_06175 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS D AYJ59_01175 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AYJ59_06180 hypothetical protein K02423 fliT; flagellar protein FliT D AYJ59_06240 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_11360 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_05710 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_11420 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_05715 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_06245 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYJ59_11355 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_11410 hypothetical protein K02557 motB; chemotaxis protein MotB D AYJ59_11415 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_05980 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AYJ59_05975 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D AYJ59_03185 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AYJ59_04155 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AYJ59_06185 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYJ59_07250 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D AYJ59_06195 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYJ59_09600 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D AYJ59_06945 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D AYJ59_12420 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:thio01501] D AYJ59_06765 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D AYJ59_08580 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02030 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_05680 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02035 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AYJ59_05675 multidrug transporter K18138 acrB; multidrug efflux pump D AYJ59_08575 RND transporter K18138 acrB; multidrug efflux pump D AYJ59_00880 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein D AYJ59_01705 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYJ59_05185 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYJ59_10345 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:thio01502] D AYJ59_10230 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYJ59_06540 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AYJ59_10335 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D AYJ59_10330 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AYJ59_10315 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:thio01503] D AYJ59_07905 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYJ59_09680 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYJ59_00295 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AYJ59_08580 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02030 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_05680 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02035 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AYJ59_05675 multidrug transporter K18138 acrB; multidrug efflux pump D AYJ59_08575 RND transporter K18138 acrB; multidrug efflux pump D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein D AYJ59_06880 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:thio01000] C 01001 Protein kinases [BR:thio01001] D AYJ59_10475 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AYJ59_08405 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AYJ59_07270 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AYJ59_00900 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYJ59_08065 hypothetical protein K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3] D AYJ59_08795 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AYJ59_12260 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D AYJ59_00780 hypothetical protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AYJ59_01505 hypothetical protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D AYJ59_08070 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AYJ59_09585 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_05295 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_09385 hypothetical protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D AYJ59_06190 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYJ59_00175 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D AYJ59_00115 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:thio01009] D AYJ59_05310 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AYJ59_05255 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:thio01002] D AYJ59_10705 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D AYJ59_06365 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AYJ59_01375 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D AYJ59_05280 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D AYJ59_09210 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D AYJ59_02360 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D AYJ59_04915 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D AYJ59_10180 asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D AYJ59_04390 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D AYJ59_05605 hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24] D AYJ59_05945 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D AYJ59_00205 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D AYJ59_07700 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-] D AYJ59_03440 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AYJ59_03445 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AYJ59_02470 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AYJ59_02475 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D AYJ59_04555 aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D AYJ59_06795 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D AYJ59_06820 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D AYJ59_05510 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D AYJ59_09190 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AYJ59_09980 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D AYJ59_05220 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D AYJ59_10130 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D AYJ59_06855 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D AYJ59_01820 hypothetical protein K09933 mtfA; MtfA peptidase D AYJ59_09680 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYJ59_05175 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AYJ59_09285 peptidase S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYJ59_07415 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D AYJ59_07405 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AYJ59_05565 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D AYJ59_07070 repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D AYJ59_09055 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AYJ59_09670 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D AYJ59_12485 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D AYJ59_04385 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D AYJ59_07545 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-] D AYJ59_01980 hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-] D AYJ59_11115 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D AYJ59_04665 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D AYJ59_06685 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D AYJ59_07875 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D AYJ59_07880 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:thio01003] D AYJ59_05345 glycosyl transferase family 1 K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D AYJ59_10630 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D AYJ59_01705 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYJ59_09455 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:thio01005] D AYJ59_06880 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D AYJ59_06885 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D AYJ59_10215 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D AYJ59_06870 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D AYJ59_08745 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D AYJ59_08465 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D AYJ59_12300 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYJ59_05730 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D AYJ59_12395 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D AYJ59_01130 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AYJ59_10680 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D AYJ59_10670 hypothetical protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D AYJ59_01145 glutamine--scyllo-inositol aminotransferase K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109] D AYJ59_01140 alcohol dehydrogenase K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48] D AYJ59_06940 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D AYJ59_08455 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AYJ59_01135 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D AYJ59_08365 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D AYJ59_10675 arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D AYJ59_05750 ADP-heptose--LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D AYJ59_05780 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D AYJ59_07960 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D AYJ59_01430 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AYJ59_10660 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D AYJ59_11430 histidinol-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D AYJ59_10665 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D AYJ59_05745 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D AYJ59_05030 hypothetical protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:thio01011] D AYJ59_08310 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D AYJ59_06775 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D AYJ59_10235 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D AYJ59_10325 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D AYJ59_10340 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D AYJ59_10230 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D AYJ59_06540 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D AYJ59_00840 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D AYJ59_10330 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D AYJ59_10315 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D AYJ59_04110 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYJ59_03140 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D AYJ59_10720 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AYJ59_01705 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D AYJ59_05185 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D AYJ59_10345 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AYJ59_05175 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D AYJ59_09285 peptidase S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D AYJ59_08720 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D AYJ59_10700 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D AYJ59_06055 hypothetical protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D AYJ59_00090 lytic transglycosylase K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D AYJ59_08715 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D AYJ59_09780 BCR, YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D AYJ59_07905 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYJ59_06500 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:thio01004] D AYJ59_09810 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D AYJ59_00585 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AYJ59_09815 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D AYJ59_03420 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_00625 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_02450 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D AYJ59_09795 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D AYJ59_03275 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_04245 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_00610 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_09805 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D AYJ59_03415 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AYJ59_02445 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D AYJ59_06875 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYJ59_00530 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D AYJ59_07375 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D AYJ59_10435 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D AYJ59_07770 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D AYJ59_09820 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D AYJ59_04135 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYJ59_03165 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D AYJ59_11425 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:thio01006] D AYJ59_06380 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D AYJ59_11505 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D AYJ59_06845 UDP diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D AYJ59_07895 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AYJ59_06710 hypothetical protein K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D AYJ59_00995 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:thio01007] D AYJ59_07175 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYJ59_08730 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AYJ59_12415 hypothetical protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AYJ59_02400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYJ59_05685 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AYJ59_08725 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AYJ59_12220 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYJ59_08085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AYJ59_10710 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AYJ59_05855 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AYJ59_10805 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYJ59_09705 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AYJ59_08885 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYJ59_10045 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AYJ59_11440 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AYJ59_11435 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AYJ59_09495 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AYJ59_07950 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AYJ59_05055 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AYJ59_05395 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYJ59_05075 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AYJ59_05080 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AYJ59_04525 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D AYJ59_06985 alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D AYJ59_07310 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_10200 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D AYJ59_02240 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D AYJ59_05600 aminotransferase class I/II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D AYJ59_10520 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D AYJ59_12055 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D AYJ59_10595 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D AYJ59_11820 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D AYJ59_05455 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D AYJ59_05170 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D AYJ59_08960 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_10515 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D AYJ59_07320 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D AYJ59_04970 aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102] D AYJ59_06065 aminotransferase DegT K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:thio00194] D AYJ59_00980 ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D AYJ59_00975 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D AYJ59_00970 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D AYJ59_00965 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D AYJ59_00960 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D AYJ59_00955 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D AYJ59_00950 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D AYJ59_00945 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AYJ59_00935 hypothetical protein K02116 atpI; ATP synthase protein I D AYJ59_00940 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:thio03000] D AYJ59_12170 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AYJ59_01825 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator D AYJ59_00805 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D AYJ59_00275 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D AYJ59_01345 hypothetical protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D AYJ59_04870 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D AYJ59_11045 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D AYJ59_11050 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D AYJ59_03710 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator D AYJ59_02740 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator D AYJ59_06740 hypothetical protein K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D AYJ59_04780 hypothetical protein K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon D AYJ59_02790 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYJ59_03760 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYJ59_01215 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D AYJ59_06295 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D AYJ59_01070 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D AYJ59_06785 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYJ59_07715 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D AYJ59_05935 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D AYJ59_10070 [Fe-S]-binding protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D AYJ59_04680 BadM/Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D AYJ59_04700 BadM/Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D AYJ59_02815 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AYJ59_03785 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D AYJ59_08800 DNA-binding protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D AYJ59_03400 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AYJ59_02430 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D AYJ59_11000 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AYJ59_06185 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYJ59_01575 hypothetical protein K15836 fhlA; formate hydrogenlyase transcriptional activator D AYJ59_00390 hydrogenase K02584 nifA; Nif-specific regulatory protein D AYJ59_03495 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D AYJ59_10900 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D AYJ59_02525 ModE family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D AYJ59_08525 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator D AYJ59_01285 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator D AYJ59_01525 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator D AYJ59_03345 CopG family transcriptional regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D AYJ59_04315 CopG family transcriptional regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D AYJ59_10440 transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D AYJ59_00930 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AYJ59_09015 molecular chaperone GrpE K03705 hrcA; heat-inducible transcriptional repressor D AYJ59_11290 hypothetical protein K07733 alpA; prophage regulatory protein D AYJ59_04050 hypothetical protein K07735 algH; putative transcriptional regulator D AYJ59_03080 hypothetical protein K07735 algH; putative transcriptional regulator D AYJ59_07030 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYJ59_06315 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D AYJ59_10365 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:thio03021] D AYJ59_11590 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AYJ59_11745 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AYJ59_11740 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AYJ59_01125 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AYJ59_03185 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AYJ59_04155 RNA polymerase subunit sigma-70 K03086 rpoD; RNA polymerase primary sigma factor D AYJ59_01170 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D AYJ59_07250 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D AYJ59_09600 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYJ59_07740 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AYJ59_06340 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D AYJ59_11770 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AYJ59_04600 stringent starvation protein A K03599 sspA; stringent starvation protein A D AYJ59_04605 stringent starvation protein B K03600 sspB; stringent starvation protein B D AYJ59_09685 hypothetical protein K03803 rseC; sigma-E factor negative regulatory protein RseC D AYJ59_07030 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYJ59_08935 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D AYJ59_10615 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D AYJ59_12730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AYJ59_00395 hypothetical protein K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:thio03019] D AYJ59_09850 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AYJ59_05810 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AYJ59_09665 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AYJ59_05920 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AYJ59_09975 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AYJ59_09360 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D AYJ59_01990 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AYJ59_02060 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYJ59_06945 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYJ59_07705 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D AYJ59_12730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D AYJ59_09005 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYJ59_11475 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYJ59_07890 RNA-binding protein hfq K03666 hfq; host factor-I protein D AYJ59_02700 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYJ59_03670 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D AYJ59_03050 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYJ59_04020 polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D AYJ59_05690 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D AYJ59_08235 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D AYJ59_05405 carbon storage regulator K03563 csrA; carbon storage regulator D AYJ59_08515 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D AYJ59_10395 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:thio03011] D AYJ59_07290 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D AYJ59_06825 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D AYJ59_11680 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D AYJ59_11595 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D AYJ59_11625 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D AYJ59_06515 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D AYJ59_11730 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D AYJ59_11640 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D AYJ59_10890 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D AYJ59_11715 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D AYJ59_11600 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D AYJ59_11735 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D AYJ59_11605 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D AYJ59_11645 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D AYJ59_07710 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D AYJ59_09900 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D AYJ59_11665 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D AYJ59_06520 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D AYJ59_11690 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D AYJ59_10725 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D AYJ59_11760 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D AYJ59_11695 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D AYJ59_11710 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D AYJ59_11705 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D AYJ59_11650 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D AYJ59_11635 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D AYJ59_06530 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D AYJ59_11755 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D AYJ59_11765 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D AYJ59_11750 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D AYJ59_10895 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D AYJ59_11660 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D AYJ59_11615 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D AYJ59_11675 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D AYJ59_11585 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D AYJ59_11630 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D AYJ59_09885 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D AYJ59_05070 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D AYJ59_11500 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D AYJ59_11685 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D AYJ59_11700 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D AYJ59_11655 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D AYJ59_11495 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D AYJ59_11670 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D AYJ59_11620 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D AYJ59_12740 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D AYJ59_09825 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D AYJ59_03540 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AYJ59_02570 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D AYJ59_05065 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D AYJ59_11315 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D AYJ59_02425 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:thio03009] D AYJ59_09665 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AYJ59_09975 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D AYJ59_09660 GTPase Era K03595 era; GTPase D AYJ59_11490 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D AYJ59_07030 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D AYJ59_07740 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D AYJ59_06340 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D AYJ59_11770 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D AYJ59_05110 rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D AYJ59_12250 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D AYJ59_12090 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D AYJ59_03475 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AYJ59_02505 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D AYJ59_04075 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AYJ59_03105 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D AYJ59_00920 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AYJ59_10360 ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D AYJ59_04910 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D AYJ59_02100 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D AYJ59_05925 23S rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D AYJ59_09195 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D AYJ59_10770 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D AYJ59_02955 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AYJ59_03925 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D AYJ59_08005 rRNA methyltransferase K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D AYJ59_10695 50S rRNA methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D AYJ59_10055 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D AYJ59_06640 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYJ59_09860 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYJ59_04730 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYJ59_07100 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D AYJ59_09845 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D AYJ59_06480 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D AYJ59_07830 23S rRNA pseudouridylate synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D AYJ59_10090 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D AYJ59_01680 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D AYJ59_09895 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D AYJ59_06665 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D AYJ59_06920 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D AYJ59_10990 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D AYJ59_05575 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D AYJ59_07685 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D AYJ59_09850 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D AYJ59_05810 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D AYJ59_04045 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AYJ59_03075 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D AYJ59_01990 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D AYJ59_02755 DEAD/DEAH box helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D AYJ59_03725 DEAD/DEAH box helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D AYJ59_00375 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AYJ59_09990 GTP-binding protein EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D AYJ59_10030 ribosome biogenesis GTPase Der K03977 engA; GTPase D AYJ59_08000 ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D AYJ59_07885 GTPase HflX K03665 hflX; GTPase D AYJ59_00500 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AYJ59_01120 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D AYJ59_07730 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D AYJ59_07745 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D AYJ59_10775 ribosome-associated protein IOJAP K09710 ybeB; ribosome-associated protein D AYJ59_10825 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D AYJ59_09200 RNA-binding protein K07574 yhbY; RNA-binding protein D AYJ59_07055 hypothetical protein K09889 yjgA; ribosome-associated protein D AYJ59_08385 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D AYJ59_11305 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D AYJ59_09830 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:thio03016] D AYJ59_11950 cca; multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D AYJ59_07175 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYJ59_07950 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D AYJ59_10710 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D AYJ59_10805 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYJ59_08085 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D AYJ59_08730 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D AYJ59_12220 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYJ59_09705 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D AYJ59_08885 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYJ59_05395 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D AYJ59_05055 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D AYJ59_09495 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D AYJ59_08725 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D AYJ59_05855 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D AYJ59_10045 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D AYJ59_05075 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D AYJ59_05080 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D AYJ59_02400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYJ59_05685 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D AYJ59_12490 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D AYJ59_02280 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AYJ59_12775 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D AYJ59_09245 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D AYJ59_07725 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D AYJ59_12075 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D AYJ59_00500 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D AYJ59_07895 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D AYJ59_00740 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D AYJ59_00915 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AYJ59_00725 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D AYJ59_10370 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D AYJ59_10170 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D AYJ59_01725 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D AYJ59_05435 hypothetical protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D AYJ59_12295 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D AYJ59_06305 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D AYJ59_11440 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D AYJ59_11435 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D AYJ59_12415 hypothetical protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D AYJ59_05285 tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D AYJ59_07225 tRNA dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D AYJ59_10995 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D AYJ59_10835 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D AYJ59_00100 tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D AYJ59_00105 tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D AYJ59_00080 SmtA protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D AYJ59_12405 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D AYJ59_09890 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D AYJ59_10080 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D AYJ59_02390 tRNA (cytosine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D AYJ59_11815 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D AYJ59_06640 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYJ59_09860 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYJ59_04730 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D AYJ59_07835 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D AYJ59_12305 adenine nucleotide alpha hydrolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D AYJ59_11445 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYJ59_10125 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D AYJ59_10065 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D AYJ59_09700 glycine cleavage system protein T K06980 ygfZ; tRNA-modifying protein YgfZ D AYJ59_12705 FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D AYJ59_06610 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D AYJ59_08825 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D AYJ59_06375 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D AYJ59_09280 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D AYJ59_00765 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D AYJ59_07915 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D AYJ59_06615 tgt; tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D AYJ59_05905 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D AYJ59_06930 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D AYJ59_01795 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D AYJ59_06905 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D AYJ59_04140 N(6)-L-threonylcarbamoyladenine synthase TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AYJ59_03170 N(6)-L-threonylcarbamoyladenine synthase TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D AYJ59_07910 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D AYJ59_11575 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D AYJ59_05920 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D AYJ59_07705 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:thio03012] D AYJ59_07735 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AYJ59_05060 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AYJ59_07430 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D AYJ59_06830 elongation factor Ts K02357 tsf; elongation factor Ts D AYJ59_11720 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYJ59_11785 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYJ59_11725 fusA; elongation factor G K02355 fusA; elongation factor G D AYJ59_11340 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D AYJ59_06840 ribosome recycling factor K02838 frr; ribosome recycling factor D AYJ59_11345 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D AYJ59_11310 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D AYJ59_07785 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D AYJ59_09305 elongation factor P-like protein YeiP K02356 efp; elongation factor P D AYJ59_04590 elongation factor P K02356 efp; elongation factor P D AYJ59_04595 lysine--tRNA ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D AYJ59_04585 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D AYJ59_05450 ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D AYJ59_08395 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D AYJ59_08980 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:thio03110] D AYJ59_07790 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D AYJ59_11090 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D AYJ59_07410 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D AYJ59_11160 hslU; ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D AYJ59_05310 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AYJ59_09005 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYJ59_11475 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYJ59_09000 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AYJ59_07800 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein D AYJ59_01950 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein D AYJ59_05150 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D AYJ59_09010 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AYJ59_01905 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D AYJ59_00515 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D AYJ59_11480 co-chaperone GroES K04078 groES; chaperonin GroES D AYJ59_09680 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D AYJ59_09190 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D AYJ59_00945 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D AYJ59_02380 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYJ59_00185 hypothetical protein K09796 pccA; periplasmic copper chaperone A D AYJ59_05475 hypothetical protein K09796 pccA; periplasmic copper chaperone A D AYJ59_01410 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D AYJ59_01415 hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D AYJ59_08735 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D AYJ59_08740 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D AYJ59_07850 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D AYJ59_08150 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AYJ59_09525 hypothetical protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D AYJ59_06450 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D AYJ59_08685 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D AYJ59_06650 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D AYJ59_04655 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D AYJ59_05120 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D AYJ59_12725 thioredoxin K03671 TXN; thioredoxin D AYJ59_06400 thioredoxin K03671 TXN; thioredoxin D AYJ59_00020 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D AYJ59_05370 thioredoxin K05838 ybbN; putative thioredoxin D AYJ59_02375 glutaredoxin K03676 grxC; glutaredoxin 3 D AYJ59_10175 glutaredoxin K07390 grxD; monothiol glutaredoxin D AYJ59_00295 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D AYJ59_09875 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AYJ59_10970 cytochrome C biogenesis protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] C 04131 Membrane trafficking [BR:thio04131] D AYJ59_07640 hypothetical protein K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D AYJ59_10060 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D AYJ59_11915 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYJ59_02940 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_11905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_03910 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_05310 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:thio03051] D AYJ59_05310 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:thio03032] D AYJ59_08700 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D AYJ59_12170 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AYJ59_07400 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AYJ59_05085 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AYJ59_07285 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AYJ59_00710 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AYJ59_06535 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D AYJ59_03180 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AYJ59_04150 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D AYJ59_11550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYJ59_07775 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AYJ59_00705 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYJ59_04550 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYJ59_10795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYJ59_09770 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYJ59_07750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_12065 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_08690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04705 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_10540 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AYJ59_06890 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D AYJ59_00330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYJ59_07050 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYJ59_08030 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D AYJ59_07325 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AYJ59_00650 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AYJ59_11365 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AYJ59_11395 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AYJ59_12225 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:thio03036] D AYJ59_12170 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AYJ59_09665 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D AYJ59_07400 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AYJ59_05085 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AYJ59_07285 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AYJ59_07800 molecular chaperone DnaJ K05516 cbpA; curved DNA-binding protein D AYJ59_01950 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein D AYJ59_00710 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D AYJ59_08160 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D AYJ59_11000 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AYJ59_07890 RNA-binding protein hfq K03666 hfq; host factor-I protein D AYJ59_02790 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYJ59_03760 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D AYJ59_10220 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AYJ59_06950 septum formation initiator K05589 ftsB; cell division protein FtsB D AYJ59_10345 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D AYJ59_09515 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D AYJ59_10350 hypothetical protein K03586 ftsL; cell division protein FtsL D AYJ59_10225 hypothetical protein K03589 ftsQ; cell division protein FtsQ D AYJ59_10320 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AYJ59_10355 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AYJ59_07045 cell division-like protein K03528 zipA; cell division protein ZipA D AYJ59_07905 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D AYJ59_08580 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02030 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_05680 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_07485 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D AYJ59_07480 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D AYJ59_07475 cell division topological specificity factor K03608 minE; cell division topological specificity factor D AYJ59_05200 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AYJ59_05195 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D AYJ59_05190 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D AYJ59_05180 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D AYJ59_07590 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D AYJ59_00925 chromosome partitioning protein K03496 parA; chromosome partitioning protein D AYJ59_00930 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D AYJ59_11365 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AYJ59_11395 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AYJ59_00915 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D AYJ59_00920 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D AYJ59_11120 recombinase XerC K03733 xerC; integrase/recombinase XerC D AYJ59_09880 recombinase XerD K04763 xerD; integrase/recombinase XerD D AYJ59_08060 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AYJ59_00310 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:thio03400] D AYJ59_11995 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D AYJ59_01220 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D AYJ59_11405 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D AYJ59_12770 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D AYJ59_08120 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AYJ59_10195 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D AYJ59_02625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AYJ59_03595 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D AYJ59_12465 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D AYJ59_03525 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AYJ59_02555 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D AYJ59_01770 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D AYJ59_07005 phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D AYJ59_07050 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D AYJ59_00330 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D AYJ59_11565 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D AYJ59_04530 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D AYJ59_07540 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D AYJ59_12720 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D AYJ59_11745 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D AYJ59_11740 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D AYJ59_11590 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D AYJ59_01125 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D AYJ59_07460 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D AYJ59_05375 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D AYJ59_07900 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D AYJ59_07230 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D AYJ59_07235 exodeoxyribonuclease VII K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D AYJ59_07775 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D AYJ59_00705 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D AYJ59_04550 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D AYJ59_10795 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D AYJ59_09770 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D AYJ59_07750 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_12065 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_08690 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_04705 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D AYJ59_10540 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D AYJ59_11550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYJ59_05385 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D AYJ59_08870 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D AYJ59_08860 ruvB; ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D AYJ59_08875 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AYJ59_02200 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D AYJ59_08275 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D AYJ59_00700 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF D AYJ59_01040 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D AYJ59_09655 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D AYJ59_10530 recR; recombination protein RecR K06187 recR; recombination protein RecR D AYJ59_09025 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D AYJ59_04885 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D AYJ59_04880 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D AYJ59_07325 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D AYJ59_00650 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D AYJ59_12225 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D AYJ59_07400 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D AYJ59_11000 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D AYJ59_05085 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D AYJ59_07285 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D AYJ59_02060 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D AYJ59_09050 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D AYJ59_09055 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D AYJ59_07070 repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D AYJ59_05390 RecX family transcriptional regulator K03565 recX; regulatory protein D AYJ59_12095 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D AYJ59_06900 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D AYJ59_10885 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D AYJ59_04480 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:thio03029] D AYJ59_08285 cytochrome B K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D AYJ59_07735 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D AYJ59_05060 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D AYJ59_06830 elongation factor Ts K02357 tsf; elongation factor Ts D AYJ59_11720 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYJ59_11785 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYJ59_11725 fusA; elongation factor G K02355 fusA; elongation factor G D AYJ59_09660 GTPase Era K03595 era; GTPase D AYJ59_02400 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D AYJ59_10805 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D AYJ59_08885 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D AYJ59_12220 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D AYJ59_05210 glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D AYJ59_05215 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D AYJ59_05205 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D AYJ59_00085 DNA/RNA endonuclease K01173 ENDOG; endonuclease G, mitochondrial D AYJ59_11550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D AYJ59_06860 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AYJ59_09005 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYJ59_09010 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D AYJ59_11475 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYJ59_11480 co-chaperone GroES K04078 groES; chaperonin GroES D AYJ59_09000 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D AYJ59_08680 Zn-dependent hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D AYJ59_10175 glutaredoxin K07390 grxD; monothiol glutaredoxin D AYJ59_08060 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D AYJ59_00730 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYJ59_05480 electron transporter SenC K07152 SCO1; protein SCO1 D AYJ59_05310 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:thio02000] D AYJ59_05735 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D AYJ59_12120 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AYJ59_04490 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D AYJ59_03500 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYJ59_02530 molybdenum ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D AYJ59_00110 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein D AYJ59_03505 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AYJ59_02535 molybdenum ABC transporter permease K02018 modB; molybdate transport system permease protein D AYJ59_03510 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AYJ59_02540 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D AYJ59_01580 nitrate ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D AYJ59_01585 nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D AYJ59_01590 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D AYJ59_10000 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D AYJ59_10005 ABC transporter permease K02011 afuB; iron(III) transport system permease protein D AYJ59_09995 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D AYJ59_03245 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AYJ59_04215 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein D AYJ59_03260 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AYJ59_04230 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein D AYJ59_03255 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AYJ59_04225 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein D AYJ59_03250 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AYJ59_04220 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D AYJ59_03225 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AYJ59_12325 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AYJ59_04195 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AYJ59_00405 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AYJ59_01895 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D AYJ59_03355 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AYJ59_12335 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AYJ59_04325 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AYJ59_00400 nitrate ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D AYJ59_00410 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AYJ59_03350 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AYJ59_12340 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AYJ59_04320 ABC transporter K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D AYJ59_01915 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein D AYJ59_12715 ABC transporter K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D AYJ59_08340 outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D AYJ59_08345 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D AYJ59_08350 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D AYJ59_08335 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D AYJ59_08330 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D AYJ59_10465 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D AYJ59_10500 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D AYJ59_10495 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D AYJ59_10490 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D AYJ59_03195 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYJ59_04165 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D AYJ59_07370 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYJ59_06730 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D AYJ59_06750 glutathione ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYJ59_07365 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D AYJ59_07360 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYJ59_06755 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D AYJ59_07355 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D AYJ59_12360 hypothetical protein K25132 hmuT; heme transport system substrate-binding protein D AYJ59_12355 iron ABC transporter K25133 hmuU; heme transport system permease protein D AYJ59_12350 hypothetical protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D AYJ59_02140 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYJ59_11210 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYJ59_08445 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D AYJ59_02150 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AYJ59_11205 ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D AYJ59_02165 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AYJ59_11200 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D AYJ59_10270 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D AYJ59_10280 hypothetical protein K09816 znuB; zinc transport system permease protein D AYJ59_10275 zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D AYJ59_01095 manganese transporter K11707 troA; manganese/zinc/iron transport system substrate-binding protein D AYJ59_01105 zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D AYJ59_01110 iron ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein D AYJ59_01100 peptide transporter K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D AYJ59_04560 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D AYJ59_04565 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D AYJ59_08380 LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D AYJ59_00480 antibiotic ABC transporter permease K25180 ybhR; drug efflux transport system permease protein D AYJ59_00485 hypothetical protein K25181 ybhS; drug efflux transport system permease protein D AYJ59_00490 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D AYJ59_00495 hypothetical protein K25183 ybhG; membrane fusion protein YbhG D AYJ59_07440 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D AYJ59_07435 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D AYJ59_08320 metal-dependent hydrolase K01992 ABC-2.P; ABC-2 type transport system permease protein D AYJ59_00560 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AYJ59_00865 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D AYJ59_08325 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AYJ59_00555 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D AYJ59_09400 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D AYJ59_10425 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D AYJ59_01050 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D AYJ59_09405 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYJ59_10430 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYJ59_01055 methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D AYJ59_10255 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D AYJ59_00420 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D AYJ59_06555 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D AYJ59_05640 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D AYJ59_02835 MFS transporter permease K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D AYJ59_03805 MFS transporter permease K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D AYJ59_08955 Bcr/CflA subfamily drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AYJ59_04745 hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D AYJ59_08665 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D AYJ59_05525 Ion transport protein K10716 kch; voltage-gated potassium channel D AYJ59_10455 ion transporter K08714 VGSC; voltage-gated sodium channel D AYJ59_02920 ammonium transporter K03320 amt; ammonium transporter, Amt family D AYJ59_03890 ammonium transporter K03320 amt; ammonium transporter, Amt family D AYJ59_08485 ammonium transporter K03320 amt; ammonium transporter, Amt family D AYJ59_05870 ammonium transporter K03320 amt; ammonium transporter, Amt family D AYJ59_01085 ammonium transporter K03320 amt; ammonium transporter, Amt family D AYJ59_06700 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D AYJ59_04600 stringent starvation protein A K03599 sspA; stringent starvation protein A D AYJ59_00035 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYJ59_00040 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYJ59_00140 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D AYJ59_07580 hypothetical protein K03282 mscL; large conductance mechanosensitive channel D AYJ59_05425 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D AYJ59_06770 mechanosensitive ion channel protein MscS K16052 ynaI; MscS family membrane protein D AYJ59_08390 magnesium transporter K06213 mgtE; magnesium transporter D AYJ59_01685 magnesium transporter K06213 mgtE; magnesium transporter D AYJ59_06240 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_11360 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_05710 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_11420 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_05715 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_06245 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYJ59_11355 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_11410 hypothetical protein K02557 motB; chemotaxis protein MotB D AYJ59_11415 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_01790 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB D AYJ59_05245 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB D AYJ59_05240 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AYJ59_01785 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D AYJ59_08855 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D AYJ59_08850 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D AYJ59_08615 magnesium transporter CorA K16074 zntB; zinc transporter D AYJ59_09500 camphor resistance protein CrcB K06199 crcB; fluoride exporter D AYJ59_08260 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AYJ59_12105 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D AYJ59_12665 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D AYJ59_10955 aromatic hydrocarbon degradation protein K06076 fadL; long-chain fatty acid transport protein D AYJ59_08430 hypothetical protein K16092 btuB; vitamin B12 transporter D AYJ59_12330 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D AYJ59_12370 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D AYJ59_11215 ligand-gated channel protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D AYJ59_01945 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYJ59_02135 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYJ59_00195 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYJ59_05485 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYJ59_12635 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYJ59_01670 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D AYJ59_00680 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein D AYJ59_12135 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D AYJ59_00880 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYJ59_09415 hypothetical protein K18904 nodT; outer membrane protein, multidrug efflux system D AYJ59_06860 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D AYJ59_10035 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D AYJ59_05550 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D AYJ59_06475 competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD D AYJ59_06290 cell envelope protein SmpA K06186 bamE; outer membrane protein assembly factor BamE D AYJ59_08375 OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA D AYJ59_08370 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D AYJ59_05125 organic solvent tolerance protein K04744 lptD; LPS-assembly protein D AYJ59_10800 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D AYJ59_10820 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D AYJ59_02480 murein hydrolase transporter LrgA K06518 cidA; holin-like protein D AYJ59_03450 murein hydrolase transporter LrgA K06518 cidA; holin-like protein D AYJ59_11945 fieF; cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D AYJ59_02620 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D AYJ59_03590 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D AYJ59_00670 cytochrome-c peroxidase K15726 czcA; heavy metal efflux system protein D AYJ59_04405 cation transporter K07787 cusA; copper/silver efflux system protein D AYJ59_02035 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AYJ59_05675 multidrug transporter K18138 acrB; multidrug efflux pump D AYJ59_08575 RND transporter K18138 acrB; multidrug efflux pump D AYJ59_12005 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D AYJ59_02795 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AYJ59_03585 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AYJ59_03765 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AYJ59_02615 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D AYJ59_08675 hypothetical protein K03304 tehA; tellurite resistance protein D AYJ59_08360 calcium:proton antiporter K07301 yrbG; cation:H+ antiporter D AYJ59_06595 sodium:proline symporter K11928 putP; sodium/proline symporter D AYJ59_07760 actP; cation acetate symporter K14393 actP; cation/acetate symporter D AYJ59_06490 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter D AYJ59_12275 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D AYJ59_12270 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D AYJ59_11185 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D AYJ59_08660 chloride channel protein K03281 clcA; chloride channel protein, CIC family D AYJ59_04875 hypothetical protein K07240 chrA; chromate transporter D AYJ59_05670 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D AYJ59_00225 Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter D AYJ59_00230 cation:proton antiporter K05559 phaA; multicomponent K+:H+ antiporter subunit A D AYJ59_00235 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D AYJ59_00240 cation:proton antiporter K05561 phaD; multicomponent K+:H+ antiporter subunit D D AYJ59_00245 cation:proton antiporter K05562 phaE; multicomponent K+:H+ antiporter subunit E D AYJ59_00250 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D AYJ59_00255 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D AYJ59_10720 murein biosynthesis protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D AYJ59_00380 transporter K13936 mdcF; malonate transporter and related proteins D AYJ59_04635 hypothetical protein K24180 mleP; malate permease and related proteins D AYJ59_07955 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein D AYJ59_00450 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D AYJ59_01715 MarC family transcriptional regulator K05595 marC; multiple antibiotic resistance protein D AYJ59_10320 cell division protein FtsW K03588 ftsW; cell division protein FtsW D AYJ59_01445 hypothetical protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein D AYJ59_01780 hypothetical protein K03832 tonB; periplasmic protein TonB D AYJ59_05235 hypothetical protein K03832 tonB; periplasmic protein TonB D AYJ59_05940 cell envelope biogenesis protein OmpA K03640 pal; peptidoglycan-associated lipoprotein D AYJ59_08835 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein D AYJ59_08845 protein TolA K03646 tolA; colicin import membrane protein D AYJ59_08840 translocation protein TolB K03641 tolB; TolB protein D AYJ59_00675 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system D AYJ59_04400 efflux transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D AYJ59_12125 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system D AYJ59_08580 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02030 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_05680 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_01660 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D AYJ59_03000 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D AYJ59_03970 ferrous iron transporter B K04759 feoB; ferrous iron transport protein B D AYJ59_00635 MltA-interacting MipA K07274 mipA; MipA family protein C 02044 Secretion system [BR:thio02044] D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein D AYJ59_12120 ABC transporter K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D AYJ59_12125 hemolysin secretion protein D K12542 lapC; membrane fusion protein, adhesin transport system D AYJ59_12135 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D AYJ59_06365 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AYJ59_09935 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D AYJ59_09930 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D AYJ59_01615 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D AYJ59_01620 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D AYJ59_01625 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE D AYJ59_01630 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D AYJ59_01635 type II secretion system protein K12510 tadB; tight adherence protein B D AYJ59_01640 type II secretion system protein K12511 tadC; tight adherence protein C D AYJ59_09945 type II and III secretion system protein K12282 mshL; MSHA biogenesis protein MshL D AYJ59_09950 hypothetical protein K12283 mshM; MSHA biogenesis protein MshM D AYJ59_03020 hypothetical protein K02221 yggT; YggT family protein D AYJ59_03990 hypothetical protein K02221 yggT; YggT family protein D AYJ59_05035 competence protein ComEA K02237 comEA; competence protein ComEA D AYJ59_08470 hypothetical protein K02238 comEC; competence protein ComEC D AYJ59_09615 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AYJ59_09620 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AYJ59_09575 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein D AYJ59_06205 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AYJ59_06215 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AYJ59_06220 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AYJ59_06260 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AYJ59_09640 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D AYJ59_09635 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AYJ59_09630 EscS/YscS/HrcS family type III secretion system export apparatus protein K02420 fliQ; flagellar biosynthesis protein FliQ D AYJ59_09625 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AYJ59_09875 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D AYJ59_10210 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D AYJ59_02380 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D AYJ59_06625 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D AYJ59_11775 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D AYJ59_06630 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D AYJ59_09170 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D AYJ59_11610 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D AYJ59_08250 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D AYJ59_03435 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_02465 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D AYJ59_06620 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D AYJ59_00730 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D AYJ59_02275 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D AYJ59_02270 preprotein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D AYJ59_02265 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:thio02042] D AYJ59_08260 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D AYJ59_07945 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:thio02022] D AYJ59_10475 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D AYJ59_10480 two-component system response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D AYJ59_08405 histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D AYJ59_08400 two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D AYJ59_07270 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D AYJ59_07265 two component transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator D AYJ59_00900 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D AYJ59_08065 hypothetical protein K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3] D AYJ59_08795 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D AYJ59_08790 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D AYJ59_12260 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D AYJ59_12265 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D AYJ59_00780 hypothetical protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D AYJ59_00790 response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D AYJ59_01505 hypothetical protein K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D AYJ59_01420 two-component system response regulator K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D AYJ59_08070 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D AYJ59_09585 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_05295 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_07855 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09565 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09595 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09905 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYJ59_05990 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_06895 response regulator receiver protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_09385 hypothetical protein K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D AYJ59_09390 hypothetical protein K14987 fixJ; two-component system, LuxR family, response regulator FixJ D AYJ59_06190 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYJ59_06195 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYJ59_00175 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D AYJ59_00180 hypothetical protein K15012 regA; two-component system, response regulator RegA D AYJ59_00115 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D AYJ59_12500 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D AYJ59_08075 response regulator receiver protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D AYJ59_09475 hypothetical protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:thio02035] D AYJ59_09585 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_05295 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D AYJ59_09560 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09580 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_09695 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D AYJ59_05290 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D AYJ59_09550 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D AYJ59_09545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D AYJ59_07855 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09565 Fis family transcriptional regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09595 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09905 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D AYJ59_09590 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ D AYJ59_05990 chemotaxis protein CheW K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_06895 response regulator receiver protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D AYJ59_00325 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_07220 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06590 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_02670 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03035 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03090 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_03640 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_04005 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_04060 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_08985 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_00425 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09370 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10285 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10305 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10385 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_10400 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01600 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06235 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01830 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_01985 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_02040 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06350 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_09755 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D AYJ59_06215 hypothetical protein K02411 fliH; flagellar assembly protein FliH D AYJ59_06220 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D AYJ59_06225 hypothetical protein K02413 fliJ; flagellar protein FliJ D AYJ59_09640 flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D AYJ59_09635 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D AYJ59_09630 EscS/YscS/HrcS family type III secretion system export apparatus protein K02420 fliQ; flagellar biosynthesis protein FliQ D AYJ59_09625 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D AYJ59_09615 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D AYJ59_09620 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D AYJ59_06210 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D AYJ59_06255 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D AYJ59_06260 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D AYJ59_06205 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D AYJ59_06035 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D AYJ59_05985 flagellar biosynthesis protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D AYJ59_06030 flagellar biosynthesis protein FlgH K02393 flgH; flagellar L-ring protein FlgH D AYJ59_06250 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL D AYJ59_06200 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D AYJ59_06230 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D AYJ59_06000 flgB; flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D AYJ59_06005 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D AYJ59_06010 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D AYJ59_06020 flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D AYJ59_06025 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D AYJ59_06040 flagellar biosynthesis K02395 flgJ; peptidoglycan hydrolase FlgJ D AYJ59_06015 hypothetical protein K02390 flgE; flagellar hook protein FlgE D AYJ59_06045 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D AYJ59_06050 flagellin-like protein K02397 flgL; flagellar hook-associated protein 3 FlgL D AYJ59_05975 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D AYJ59_05960 hypothetical protein K09860 flgP; outer membrane protein FlgP D AYJ59_05860 flagellin-like protein K02406 fliC; flagellin D AYJ59_06140 flagellin K02406 fliC; flagellin D AYJ59_06150 flagellin K02406 fliC; flagellin D AYJ59_06160 flagellin K02406 fliC; flagellin D AYJ59_06165 flagellin K02406 fliC; flagellin D AYJ59_06170 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D AYJ59_06175 hypothetical protein K02422 fliS; flagellar secretion chaperone FliS D AYJ59_01175 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D AYJ59_06180 hypothetical protein K02423 fliT; flagellar protein FliT D AYJ59_09600 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D AYJ59_06240 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_11360 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_05710 biopolymer transporter ExbB K02556 motA; chemotaxis protein MotA D AYJ59_11420 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D AYJ59_05715 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_06245 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D AYJ59_11355 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_11410 hypothetical protein K02557 motB; chemotaxis protein MotB D AYJ59_11415 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB D AYJ59_06185 hypothetical protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D AYJ59_06190 PAS domain-containing sensor histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D AYJ59_06195 Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D AYJ59_05980 flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D AYJ59_06145 hypothetical protein K06603 flaG; flagellar protein FlaG D AYJ59_09610 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D AYJ59_09605 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D AYJ59_09935 secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D AYJ59_09930 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D AYJ59_06365 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D AYJ59_01615 Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D AYJ59_01620 type II and III secretion system protein K02280 cpaC; pilus assembly protein CpaC D AYJ59_01625 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE D AYJ59_01630 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:thio04812] D AYJ59_05200 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AYJ59_10355 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AYJ59_10220 cell division protein FtsA K03590 ftsA; cell division protein FtsA D AYJ59_07485 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D AYJ59_07480 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D AYJ59_07475 cell division topological specificity factor K03608 minE; cell division topological specificity factor D AYJ59_07590 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D AYJ59_00925 chromosome partitioning protein K03496 parA; chromosome partitioning protein D AYJ59_00930 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:thio04147] D AYJ59_05310 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D AYJ59_06945 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D AYJ59_11915 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D AYJ59_11910 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D AYJ59_02940 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_11905 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_03910 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D AYJ59_06385 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D AYJ59_06670 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D AYJ59_11475 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D AYJ59_09005 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D AYJ59_10115 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D AYJ59_05275 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D AYJ59_11720 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYJ59_11785 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D AYJ59_02280 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D AYJ59_01695 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D AYJ59_12855 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D AYJ59_12850 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D AYJ59_08770 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D AYJ59_05895 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D AYJ59_10635 glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D AYJ59_02885 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03235 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_03855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_04205 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_10505 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D AYJ59_12555 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D AYJ59_05930 carbohydrate kinase K00846 KHK; ketohexokinase [EC:2.7.1.3] D AYJ59_09985 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AYJ59_04845 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D AYJ59_10020 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D AYJ59_11005 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D AYJ59_09980 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D AYJ59_08220 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_05915 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D AYJ59_07205 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D AYJ59_09175 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:thio02048] D AYJ59_07515 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D AYJ59_11245 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D AYJ59_07505 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D AYJ59_11260 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D AYJ59_07510 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D AYJ59_01340 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D AYJ59_11265 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D AYJ59_12170 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D AYJ59_10355 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AYJ59_05200 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AYJ59_11365 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AYJ59_11395 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AYJ59_07175 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D AYJ59_01870 hypothetical protein K09159 cptB; antitoxin CptB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:thio01504] D AYJ59_08580 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02030 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_05680 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D AYJ59_02035 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D AYJ59_05675 multidrug transporter K18138 acrB; multidrug efflux pump D AYJ59_08575 RND transporter K18138 acrB; multidrug efflux pump D AYJ59_00880 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D AYJ59_06740 hypothetical protein K18294 nfxB; TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor D AYJ59_06725 type I secretion protein TolC K12340 tolC; outer membrane protein D AYJ59_04410 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:thio03100] D AYJ59_07180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_02415 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_03385 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_04355 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_05835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D AYJ59_09745 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_02935 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_03905 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_09485 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D AYJ59_10550 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D AYJ59_07380 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYJ59_07390 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D AYJ59_07525 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D AYJ59_11325 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D AYJ59_07185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYJ59_07195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D AYJ59_11795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYJ59_07190 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYJ59_07530 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D AYJ59_09750 tRNA-His K14226 tRNA-His; tRNA His D AYJ59_02410 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_03380 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_04350 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_05830 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D AYJ59_09165 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_01275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_07520 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_06575 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_01270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D AYJ59_08815 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYJ59_08820 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D AYJ59_09080 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_03205 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_04175 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_11300 tRNA-Met K14230 tRNA-Met; tRNA Met D AYJ59_01280 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D AYJ59_10420 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYJ59_09740 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D AYJ59_09490 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYJ59_05410 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYJ59_04630 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D AYJ59_11790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYJ59_02440 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYJ59_03410 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D AYJ59_11780 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D AYJ59_11800 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D AYJ59_06580 tRNA-Val K14237 tRNA-Val; tRNA Val D AYJ59_07385 tRNA-Val K14237 tRNA-Val; tRNA Val D AYJ59_07395 tRNA-Val K14237 tRNA-Val; tRNA Val D AYJ59_02425 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D AYJ59_10370 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D AYJ59_12020 dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D AYJ59_00170 anaerobic sulfatase maturase K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7] D AYJ59_02830 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D AYJ59_03800 glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D AYJ59_01690 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D AYJ59_09335 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D AYJ59_09330 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AYJ59_05540 alkyl hydroperoxide reductase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D AYJ59_02020 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D AYJ59_04685 flavohemoglobin K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D AYJ59_12380 hypothetical protein K02217 ftnA; ferritin [EC:1.16.3.2] D AYJ59_07240 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D AYJ59_05045 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AYJ59_06965 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D AYJ59_12610 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AYJ59_01235 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D AYJ59_12280 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D AYJ59_10815 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D AYJ59_08975 histone acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-] D AYJ59_07780 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D AYJ59_02160 hypothetical protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D AYJ59_00440 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D AYJ59_10300 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D AYJ59_04055 lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D AYJ59_03085 lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D AYJ59_02075 hypothetical protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D AYJ59_05885 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D AYJ59_11140 hypothetical protein K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D AYJ59_01920 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D AYJ59_03555 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AYJ59_02585 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AYJ59_05630 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D AYJ59_07085 histidinol phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D AYJ59_02675 phosphoglycolate phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D AYJ59_03645 phosphoglycolate phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D AYJ59_03575 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AYJ59_09070 phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AYJ59_00905 response regulator receiver protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AYJ59_02605 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D AYJ59_11580 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AYJ59_09765 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D AYJ59_01885 hypothetical protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D AYJ59_12240 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D AYJ59_09835 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D AYJ59_00055 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AYJ59_00120 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D AYJ59_03135 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D AYJ59_04105 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D AYJ59_05440 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D AYJ59_05040 ATP-dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D AYJ59_08105 electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D AYJ59_08095 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D AYJ59_08555 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D AYJ59_02340 ATPase P K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D AYJ59_03515 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D AYJ59_02545 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D AYJ59_12440 hypothetical protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D AYJ59_08110 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D AYJ59_08115 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D AYJ59_08090 electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D AYJ59_11025 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D AYJ59_11065 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D AYJ59_11030 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein D AYJ59_11060 AAA family ATPase K04748 norQ; nitric oxide reductase NorQ protein D AYJ59_06510 flavodoxin FldA K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D AYJ59_03700 hypothetical protein K06203 cysZ; CysZ protein D AYJ59_02730 hypothetical protein K06203 cysZ; CysZ protein D AYJ59_06810 glyoxalase K08234 yaeR; glyoxylase I family protein D AYJ59_04545 peptidase M14 K14054 mpaA; murein peptide amidase A D AYJ59_03045 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein D AYJ59_04015 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D AYJ59_07280 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D AYJ59_04575 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D AYJ59_12825 heme biosynthesis protein HemY K02498 hemY; HemY protein D AYJ59_11180 ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D AYJ59_11175 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D AYJ59_12205 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others D AYJ59_02975 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D AYJ59_03945 carboxylesterase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D AYJ59_02855 cold-shock protein K03704 cspA; cold shock protein D AYJ59_07980 cold-shock protein K03704 cspA; cold shock protein D AYJ59_03825 cold-shock protein K03704 cspA; cold shock protein D AYJ59_02925 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D AYJ59_03895 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D AYJ59_08780 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D AYJ59_05875 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D AYJ59_00870 multidrug ABC transporter ATP-binding protein K13926 rbbA; ribosome-dependent ATPase D AYJ59_00460 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D AYJ59_07795 clpS; ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D AYJ59_07420 trigger factor K03545 tig; trigger factor D AYJ59_06275 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D AYJ59_01380 hypothetical protein K04653 hypC; hydrogenase expression/formation protein HypC D AYJ59_01425 hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC D AYJ59_01435 hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D AYJ59_01440 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D AYJ59_01510 hypothetical protein K04656 hypF; hydrogenase maturation protein HypF D AYJ59_00345 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D AYJ59_11830 peroxiredoxin K07397 yhfA; putative redox protein D AYJ59_00305 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D AYJ59_08550 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D AYJ59_03550 hypothetical protein K03630 radC; DNA repair protein RadC D AYJ59_02580 hypothetical protein K03630 radC; DNA repair protein RadC D AYJ59_09910 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D AYJ59_04900 hypothetical protein K07460 yraN; putative endonuclease D AYJ59_04670 excinuclease ABC subunit C K07461 K07461; putative endonuclease D AYJ59_12235 DNA processing protein DprA K04096 smf; DNA processing protein D AYJ59_09505 recombination factor protein RarA K07478 ycaJ; putative ATPase D AYJ59_02190 hypothetical protein K07484 K07484; transposase D AYJ59_07125 transposase K07491 rayT; REP-associated tyrosine transposase D AYJ59_01540 hypothetical protein K07493 K07493; putative transposase D AYJ59_12155 hypothetical protein K07497 K07497; putative transposase D AYJ59_01290 integrase K14059 int; integrase D AYJ59_01535 hypothetical protein K14059 int; integrase C 99979 Viral proteins C 99998 Others D AYJ59_08760 sulfurtransferase K03972 pspE; phage shock protein E D AYJ59_10535 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D AYJ59_01260 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D AYJ59_10470 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D AYJ59_06780 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D AYJ59_07150 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D AYJ59_07080 septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility D AYJ59_07650 transcriptional regulator K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D AYJ59_12480 GTP-binding protein TypA K06207 typA; GTP-binding protein D AYJ59_03490 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D AYJ59_04690 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D AYJ59_02520 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D AYJ59_10830 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D AYJ59_05535 phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase D AYJ59_07755 hypothetical protein K07182 K07182; CBS domain-containing protein D AYJ59_02645 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein D AYJ59_03615 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D AYJ59_09510 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D AYJ59_00270 ABC transporter K04754 mlaA; phospholipid-binding lipoprotein MlaA D AYJ59_06865 molecular chaperone Skp K06142 hlpA; outer membrane protein D AYJ59_06975 hypothetical protein K12943 ygeR; lipoprotein YgeR D AYJ59_05420 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D AYJ59_12780 hypothetical protein K07289 asmA; AsmA protein D AYJ59_00875 hemolysin D K01993 ABC-2.TX; HlyD family secretion protein D AYJ59_09410 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein D AYJ59_11935 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D AYJ59_10485 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein D AYJ59_10410 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D AYJ59_12365 hypothetical protein K07225 hmuS; putative hemin transport protein D AYJ59_01550 copper resistance protein CopB K07233 pcoB; copper resistance protein B D AYJ59_12345 hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO D AYJ59_00885 hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D AYJ59_01200 hypothetical protein K03796 bax; Bax protein D AYJ59_10755 serine protease K07001 K07001; NTE family protein D AYJ59_08900 hypothetical protein K07001 K07001; NTE family protein D AYJ59_08170 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D AYJ59_11465 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D AYJ59_10260 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D AYJ59_10250 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD D AYJ59_04435 hypothetical protein K07058 K07058; membrane protein D AYJ59_10965 FxsA protein K07113 fxsA; UPF0716 protein FxsA D AYJ59_05230 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE D AYJ59_01455 Fe-S metabolism protein SufE K02426 sufE; cysteine desulfuration protein SufE D AYJ59_07840 High frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein D AYJ59_07160 SlyX protein K03745 slyX; SlyX protein D AYJ59_09215 hypothetical protein K03749 dedD; DedD protein D AYJ59_06570 hypothetical protein K03112 damX; DamX protein D AYJ59_01565 electron transporter RnfE K08982 K08982; putative membrane protein D AYJ59_06735 hypothetical protein K08984 yjdF; putative membrane protein D AYJ59_06560 hypothetical protein K09858 K09858; SEC-C motif domain protein D AYJ59_01390 hypothetical protein K03618 hyaF; hydrogenase-1 operon protein HyaF D AYJ59_01385 hypothetical protein K03619 hyaE; hydrogenase-1 operon protein HyaE D AYJ59_11880 phosphate-starvation-inducible E K13256 psiE; protein PsiE D AYJ59_07805 PhnA domain protein K06193 phnA; protein PhnA C 99997 Function unknown D AYJ59_02260 hypothetical protein K06888 K06888; uncharacterized protein D AYJ59_04660 ATPase K06923 K06923; uncharacterized protein D AYJ59_06455 hypothetical protein K06950 K06950; uncharacterized protein D AYJ59_01245 NAD/FAD-binding protein K06954 K06954; uncharacterized protein D AYJ59_02255 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein D AYJ59_01675 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D AYJ59_07845 cupin K06995 K06995; uncharacterized protein D AYJ59_07010 hypothetical protein K07000 K07000; uncharacterized protein D AYJ59_10940 hypothetical protein K07018 K07018; uncharacterized protein D AYJ59_07025 hypothetical protein K07028 K07028; uncharacterized protein D AYJ59_09340 hypothetical protein K07071 K07071; uncharacterized protein D AYJ59_02820 permease K07089 K07089; uncharacterized protein D AYJ59_03790 permease K07089 K07089; uncharacterized protein D AYJ59_02050 permease K07089 K07089; uncharacterized protein D AYJ59_02665 permease K07090 K07090; uncharacterized protein D AYJ59_03635 permease K07090 K07090; uncharacterized protein D AYJ59_12400 permease K07090 K07090; uncharacterized protein D AYJ59_00720 hypothetical protein K07090 K07090; uncharacterized protein D AYJ59_09035 hypothetical protein K07093 K07093; uncharacterized protein D AYJ59_12470 hypothetical protein K07112 K07112; uncharacterized protein D AYJ59_12475 hypothetical protein K07112 K07112; uncharacterized protein D AYJ59_01350 hypothetical protein K07112 K07112; uncharacterized protein D AYJ59_11080 YeeE/YedE K07112 K07112; uncharacterized protein D AYJ59_04905 hypothetical protein K07121 K07121; uncharacterized protein D AYJ59_02705 membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D AYJ59_03675 membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D AYJ59_02010 hypothetical protein K09004 K09004; uncharacterized protein D AYJ59_10445 hypothetical protein K09004 K09004; uncharacterized protein D AYJ59_01015 hypothetical protein K09004 K09004; uncharacterized protein D AYJ59_01020 hypothetical protein K09004 K09004; uncharacterized protein D AYJ59_08990 hypothetical protein K09004 K09004; uncharacterized protein D AYJ59_04145 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D AYJ59_03175 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D AYJ59_05165 hypothetical protein K09158 K09158; uncharacterized protein D AYJ59_06645 hypothetical protein K09160 K09160; uncharacterized protein D AYJ59_01240 hypothetical protein K09701 K09701; uncharacterized protein D AYJ59_02085 hypothetical protein K09768 K09768; uncharacterized protein D AYJ59_07075 hypothetical protein K09780 K09780; uncharacterized protein D AYJ59_08460 tetraacyldisaccharide 4'-kinase K09791 K09791; uncharacterized protein D AYJ59_12140 hypothetical protein K09792 K09792; uncharacterized protein D AYJ59_07695 hypothetical protein K09797 K09797; uncharacterized protein D AYJ59_06285 RnfH family protein K09801 K09801; uncharacterized protein D AYJ59_00890 hypothetical protein K09822 K09822; uncharacterized protein D AYJ59_05145 hypothetical protein K09861 K09861; uncharacterized protein D AYJ59_05505 hypothetical protein K09895 K09895; uncharacterized protein D AYJ59_11960 hypothetical protein K09902 K09902; uncharacterized protein D AYJ59_07560 hypothetical protein K09919 K09919; uncharacterized protein D AYJ59_11150 hypothetical protein K09921 K09921; uncharacterized protein D AYJ59_02125 hypothetical protein K09924 K09924; uncharacterized protein D AYJ59_08475 ATP-binding protein K09928 K09928; uncharacterized protein D AYJ59_10375 hypothetical protein K09928 K09928; uncharacterized protein D AYJ59_04425 hypothetical protein K09929 K09929; uncharacterized protein D AYJ59_04420 hypothetical protein K09930 K09930; uncharacterized protein D AYJ59_07870 hypothetical protein K09937 K09937; uncharacterized protein D AYJ59_08035 hypothetical protein K09938 K09938; uncharacterized protein D AYJ59_01045 hypothetical protein K09950 K09950; uncharacterized protein D AYJ59_08210 hypothetical protein K09954 K09954; uncharacterized protein D AYJ59_03335 urea carboxylase K09967 K09967; uncharacterized protein D AYJ59_03340 urea carboxylase K09967 K09967; uncharacterized protein D AYJ59_04305 urea carboxylase K09967 K09967; uncharacterized protein D AYJ59_04310 urea carboxylase K09967 K09967; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 22, 2024