+D GENES KO #

  KEGG Orthology (KO) - Thermosynechococcus sp. NK55

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:thn00010] D NK55_04120 glcK-1; glucokinase GlcK K00845 glk; glucokinase [EC:2.7.1.2] D NK55_10095 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NK55_03165 pfk; 6-phosphofructokinase Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NK55_11715 fbp; fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NK55_03565 fbaA; class II fructose-1,6-bisphosphate aldolase FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NK55_11410 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NK55_09295 gap1; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase Gap1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NK55_02785 gap2; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase Gap2 K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D NK55_07935 pgk; phosphoglycerate kinase PgK K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NK55_09975 gpm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Gpm K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NK55_01405 eno; 2-phosphopyruvate hydratase (enolase) Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NK55_02175 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_07970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_11590 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_11895 putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_10345 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_03480 pdhA; pyruvate dehydrogenase E1 component alpha subunit PdhA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NK55_01010 pdhB; pyruvate dehydrogenase E1 component beta subunit PdhB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NK55_03260 pdhC; pyruvate dehydrogenase dihydrolipoamide acetyltransferase E2 component PdhC K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:thn00020] D NK55_02200 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1] D NK55_01260 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NK55_00535 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_02345 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NK55_05430 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NK55_11460 hdrB; heterodisulfide reductase subunit B HdrB K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NK55_04295 fumC; fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NK55_03480 pdhA; pyruvate dehydrogenase E1 component alpha subunit PdhA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NK55_01010 pdhB; pyruvate dehydrogenase E1 component beta subunit PdhB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NK55_03260 pdhC; pyruvate dehydrogenase dihydrolipoamide acetyltransferase E2 component PdhC K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:thn00030] D NK55_10095 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NK55_11710 zwf; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NK55_01775 pgl; 6-phosphogluconolactonase Pgl K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D NK55_11860 gnd; 6-phosphogluconate dehydrogenase Gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NK55_08755 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NK55_06020 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NK55_07170 talB; transaldolase TalB K00616 TALDO1; transaldolase [EC:2.2.1.2] D NK55_03395 rpiA; ribose-5-phosphate isomerase A RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NK55_03705 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D NK55_01765 deoC; deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NK55_04365 prsA; ribose-phosphate pyrophosphokinase PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NK55_06360 eda-2; bifunctional 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NK55_03565 fbaA; class II fructose-1,6-bisphosphate aldolase FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NK55_11715 fbp; fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NK55_03165 pfk; 6-phosphofructokinase Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:thn00040] D NK55_01380 ugdH; UDP-glucose dehydrogenase UgdH K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NK55_08755 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NK55_02635 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D NK55_11430 gutB; NAD-dependent L-iditol 2-dehydrogenase GutB K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D NK55_03305 FGGY family carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:thn00051] D NK55_02580 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NK55_09405 rfbM; bifunctional mannose-1-phosphate guyanyltransferase / mannose-6-phosphate isomerase RfbM K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NK55_07005 bifunctional mannose-1-phosphate guanyltransferase/phosphomannomutase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D NK55_00035 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NK55_01530 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NK55_01535 wcaG; GDP-fucose synthetase WcaG K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D NK55_03165 pfk; 6-phosphofructokinase Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NK55_11715 fbp; fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NK55_02635 sorbitol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D NK55_11430 gutB; NAD-dependent L-iditol 2-dehydrogenase GutB K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D NK55_03565 fbaA; class II fructose-1,6-bisphosphate aldolase FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NK55_11410 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:thn00052] D NK55_07665 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NK55_04120 glcK-1; glucokinase GlcK K00845 glk; glucokinase [EC:2.7.1.2] D NK55_03165 pfk; 6-phosphofructokinase Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:thn00053] D NK55_01380 ugdH; UDP-glucose dehydrogenase UgdH K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NK55_03805 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:thn00500] D NK55_11890 sps; sucrose phosphate synthase Sps K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D NK55_01920 spsA; sucrose-phosphate synthase SpsA K00695 SUS; sucrose synthase [EC:2.4.1.13] D NK55_01940 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NK55_10625 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D NK55_03325 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NK55_10335 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NK55_11865 glgB; alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NK55_06565 amyC; alpha-amylase AmyC K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NK55_10415 glgP-3; glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NK55_08405 glgP-2; glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NK55_10055 malQ; 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NK55_04120 glcK-1; glucokinase GlcK K00845 glk; glucokinase [EC:2.7.1.2] D NK55_10095 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NK55_02580 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:thn00520] D NK55_08470 nagA; N-acetylglucosamine-6-phosphate deacetylase NagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D NK55_02580 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NK55_04000 glmS; glucosamine--fructose-6-phosphate aminotransferase isomerizing GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NK55_05520 glmM; phosphoglucosamine mutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D NK55_09025 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NK55_03495 murQ; N-acetylmuramic acid-6-phosphate etherase MurQ K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D NK55_02185 anmK; anhydro-N-acetylmuramic acid kinase AnmK K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D NK55_10400 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NK55_03535 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NK55_07895 nanE; N-acetylmannosamine-6-phosphate 2-epimerase NanE K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D NK55_08205 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NK55_01375 rfbB-1; dTDP-glucose 4-6-dehydratase RfbB K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D NK55_04120 glcK-1; glucokinase GlcK K00845 glk; glucokinase [EC:2.7.1.2] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NK55_01380 ugdH; UDP-glucose dehydrogenase UgdH K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NK55_09000 sqdB; UDP-sulfoquinovose synthase SqdB K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] D NK55_07665 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NK55_03805 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NK55_10095 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NK55_07005 bifunctional mannose-1-phosphate guanyltransferase/phosphomannomutase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8] D NK55_00035 mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NK55_09405 rfbM; bifunctional mannose-1-phosphate guyanyltransferase / mannose-6-phosphate isomerase RfbM K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NK55_01530 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NK55_01535 wcaG; GDP-fucose synthetase WcaG K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D NK55_10625 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D NK55_10630 rfbG; CDP-glucose 4,6-dehydratase RfbG K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D NK55_03325 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:thn00620] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NK55_03480 pdhA; pyruvate dehydrogenase E1 component alpha subunit PdhA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NK55_01010 pdhB; pyruvate dehydrogenase E1 component beta subunit PdhB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NK55_03260 pdhC; pyruvate dehydrogenase dihydrolipoamide acetyltransferase E2 component PdhC K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_11515 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NK55_08900 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D NK55_02175 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_07970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_11590 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_03195 accA; acetyl-CoA carboxylase carboxyltransferase alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NK55_03280 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NK55_05710 accC; acetyl-CoA carboxylase biotin carboxylase component AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NK55_04850 accD; acetyl-CoA carboxylase carboxyltransferase beta subunit AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NK55_10065 ldhA; fermentative lactate dehydrogenase LdhA K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D NK55_04830 gloB; hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NK55_02655 maeB; decarboxylating NADP-dependent malic enzyme MaeB K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D NK55_04295 fumC; fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NK55_06230 pepC; phosphoenolpyruvate carboxylase PepC K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NK55_11895 putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_10345 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_02435 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D NK55_10825 cimA; (R)-citramalate synthase CimA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:thn00630] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NK55_02200 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1] D NK55_01260 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NK55_04585 glcD; glycolate oxidase FAD-binding subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D NK55_04955 glcE; glycolate oxidase subunit FAD binding subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D NK55_04945 glcF; glycolate oxidase FeS subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D NK55_02805 putative haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NK55_04170 rbcL; ribulose bisophosphate carboxylase large subunit RbcL K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D NK55_04160 rbcS; ribulose bisphosphate carboxylase small subunit RbcS K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D NK55_02305 glsF; ferredoxin-dependent glutamate synthase GlsF K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D NK55_04785 glnA; glutamine synthetase type I GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NK55_07305 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NK55_04710 gcvP; glycine dehydrogenase [decarboxylating] GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NK55_10250 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_05025 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NK55_06360 eda-2; bifunctional 4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase Eda K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NK55_01115 purU; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:thn00640] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NK55_08900 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_11515 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D NK55_03195 accA; acetyl-CoA carboxylase carboxyltransferase alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NK55_03280 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NK55_05710 accC; acetyl-CoA carboxylase biotin carboxylase component AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NK55_04850 accD; acetyl-CoA carboxylase carboxyltransferase beta subunit AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NK55_06865 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D NK55_01260 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:thn00650] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NK55_02345 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NK55_05430 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NK55_11460 hdrB; heterodisulfide reductase subunit B HdrB K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NK55_00935 yneI; succinate-semialdehyde dehydrogenase (NADP+) YneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NK55_11515 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D NK55_03270 ilvB; acetolactate synthase catalytic subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_05790 kgd; TPP-dependent 2-oxoglutarate decarboxylase Kgd K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_10975 ilvH; acetolactate synthase regulatory subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:thn00660] D NK55_03270 ilvB; acetolactate synthase catalytic subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_05790 kgd; TPP-dependent 2-oxoglutarate decarboxylase Kgd K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_10975 ilvH; acetolactate synthase regulatory subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NK55_11120 leuC; 3-isopropylmalate dehydratase large subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NK55_03985 leuD; 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NK55_04725 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:thn00562] D NK55_04925 suhB; myo-inositol-1-phosphate phosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NK55_07265 histidinol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NK55_11410 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:thn00190] D NK55_01365 ndhA; proton-translocating NADH-quinone dehydrogenase subunit NdhA K05572 ndhA; NAD(P)H-quinone oxidoreductase subunit 1 [EC:7.1.1.2] D NK55_09280 ndhB; proton-translocating NADH-quinone dehydrogenase subunit B NdhB K05573 ndhB; NAD(P)H-quinone oxidoreductase subunit 2 [EC:7.1.1.2] D NK55_02590 ndhC; proton-translocating NADH-quinone dehydrogenase subunit 3 NdhC K05574 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 [EC:7.1.1.2] D NK55_05770 ndhD2; proton-translocating NADH-quinone dehydrogenase subunit D2 NdhD2 K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2] D NK55_07295 ndhD4; proton-translocating NADH-quinone dehydrogenase subunit D4 NdhD4 K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2] D NK55_11100 ndhD3; proton-translocating NADH-quinone dehydrogenase subunit D3 NdhD3 K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2] D NK55_10110 ndhD1; proton-translocating NADH-quinone dehydrogenase subunit D1 NdhD1 K05575 ndhD; NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2] D NK55_01350 ndhE; proton-translocating NADH-quinone dehydrogenase K subunit NdhE K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2] D NK55_07290 ndhF4; proton-translocating NADH-quinone dehydrogenase subunit F NdhF4 K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2] D NK55_11095 ndhF3; proton-translocating NADH-quinone dehydrogenase subunit 5 NdhF K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2] D NK55_10115 ndhF1; proton-translocating NADH-quinone dehydrogenase subunit F1 NdhF1 K05577 ndhF; NAD(P)H-quinone oxidoreductase subunit 5 [EC:7.1.1.2] D NK55_01355 ndhG; proton-translocating NADH-quinone dehydrogenase subunit 6 NdhG K05578 ndhG; NAD(P)H-quinone oxidoreductase subunit 6 [EC:7.1.1.2] D NK55_03320 ndhH; proton-translocating NADH-quinone dehydrogenase subunit H NdhH K05579 ndhH; NAD(P)H-quinone oxidoreductase subunit H [EC:7.1.1.2] D NK55_01360 ndhI; proton-translocating NADH-quinone dehydrogenase subunit NdhI K05580 ndhI; NAD(P)H-quinone oxidoreductase subunit I [EC:7.1.1.2] D NK55_02595 ndhJ; proton-translocating NADH-quinone dehydrogenase subunit J NdhJ K05581 ndhJ; NAD(P)H-quinone oxidoreductase subunit J [EC:7.1.1.2] D NK55_10035 ndhK; proton-translocating NADH-quinone dehydrogenase subunit B NadhK K05582 ndhK; NAD(P)H-quinone oxidoreductase subunit K [EC:7.1.1.2] D NK55_10040 ndhL; proton-translocating NADH-quinone dehydrogenase subunit NdhL K05583 ndhL; NAD(P)H-quinone oxidoreductase subunit L [EC:7.1.1.2] D NK55_07060 ndhM; proton-translocating NADH-quinone dehydrogenase subunit M NdhM K05584 ndhM; NAD(P)H-quinone oxidoreductase subunit M [EC:7.1.1.2] D NK55_00855 ndhN; proton-translocating NADH-quinone dehydrogenase subunit N NdhN K05585 ndhN; NAD(P)H-quinone oxidoreductase subunit N [EC:7.1.1.2] D NK55_02345 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NK55_05430 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NK55_11460 hdrB; heterodisulfide reductase subunit B HdrB K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NK55_06130 ctaB; heme O synthase protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D NK55_06730 ctaE; heme-copper quinol oxidase small subunit (subunit III) CtaE K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D NK55_06740 ctaD; heme-copper quinol oxidase large subunit (subunit I) CtaD K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D NK55_06745 ctaC; heme-copper quinol oxidase subunit II CtaC K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D NK55_06135 ctaA1; heme A synthase cytochrome oxidase biogenesis protein CtaA1 K02259 COX15; heme a synthase [EC:1.17.99.9] D NK55_04715 cydA; cytochrome d ubiquinol oxidase subunit I CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NK55_04720 cydB; cytochrome d ubiquinol oxidase subunit II CydB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NK55_07000 atpA; F1 ATP synthase complex alpha subunit AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NK55_11630 atpD; F1 ATP synthase complex beta subunit AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NK55_03610 F1 ATP synthase complex gamma subunit AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NK55_06995 atpH; F1 ATP synthase complex delta subunit AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NK55_11635 atpC; F1 ATP synthase complex epsilon subunit AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NK55_06975 atpB; F0 ATP synthase complex subunit A AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NK55_06985 atpG; F0 ATP synthase complex B' subunit AtpG K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NK55_06990 atpF; F0 ATP synthase complex B subunit AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NK55_06980 atpE; F0 ATP synthase complex subunit C AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NK55_06080 ppa; inorganic pyrophosphatase Ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D NK55_00965 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis [PATH:thn00195] D NK55_02840 psbA-1; photosystem II protein D1 PsbA K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9] D NK55_05895 psbA-2; photosystem II protein D1 PsbA K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9] D NK55_05900 psbA-3; photosystem II protein D1 PsbA K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9] D NK55_04280 psbB; photosystem II core light harvesting protein PsbB K02704 psbB; photosystem II CP47 chlorophyll apoprotein D NK55_04555 psbC; photosystem II 44 kDa subunit reaction center protein PsbC K02705 psbC; photosystem II CP43 chlorophyll apoprotein D NK55_04560 psbD-1; photosystem II reaction center D2 protein PsbD K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9] D NK55_07110 psbD-2; photosystem II reaction center D2 protein PsbD K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9] D NK55_04340 psbE; cytochrome b559 alpha subunit PsbE K02707 psbE; photosystem II cytochrome b559 subunit alpha D NK55_04345 psbF; cytochrome b559 beta subunit PsbF K02708 psbF; photosystem II cytochrome b559 subunit beta D NK55_02380 psbH; photosystem II reaction center phosphoprotein PsbH K02709 psbH; photosystem II PsbH protein D NK55_01790 psbI; photosystem II reaction center I protein PsbI K02710 psbI; photosystem II PsbI protein D NK55_04360 psbJ; photosystem II reaction center protein PsbJ K02711 psbJ; photosystem II PsbJ protein D NK55_01150 psbK; photosystem II reaction center protein PsbK K02712 psbK; photosystem II PsbK protein D NK55_04350 psbL; photosystem II reaction center protein PsbL K02713 psbL; photosystem II PsbL protein D NK55_08265 psbM; photosystem II assembly protein PsbM K02714 psbM; photosystem II PsbM protein D NK55_07040 psbO; photosystem II manganese-stabilizing protein PsbO K02716 psbO; photosystem II oxygen-evolving enhancer protein 1 D NK55_08380 psbP; photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2 D NK55_04285 psbT; photosystem II reaction center protein PsbT K02718 psbT; photosystem II PsbT protein D NK55_02130 psbU; photosystem II 12 kDa extrinsic protein PsbU K02719 psbU; photosystem II PsbU protein D NK55_03335 psbV; photosystem II cytochrome c550 PsbV K02720 psbV; photosystem II cytochrome c550 D NK55_03340 psbV2; photosystem II cytochrome c550 PsbV2 K02720 psbV; photosystem II cytochrome c550 D NK55_06755 psbX; photosystem II reaction center protein PsbX K02722 psbX; photosystem II PsbX protein D NK55_10755 psbY; photosystem II protein PsbY K02723 psbY; photosystem II PsbY protein D NK55_06535 psbZ; photosystem II reaction center protein PsbZ K02724 psbZ; photosystem II PsbZ protein D NK55_09175 psb27; photosystem II reaction center protein Psb27 K08902 psb27; photosystem II Psb27 protein D NK55_08620 psb28; photosystem II reaction center protein Psb28 K08903 psb28; photosystem II 13kDa protein D NK55_10145 psaA; photosystem I P700 chlorophyll a apoprotein A1 PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12] D NK55_10150 psaB; photosystem I P700 chlorophyll a apoprotein A2 PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12] D NK55_00120 psaC; photosystem I iron-sulfur center subunit VII PsaC K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12] D NK55_05265 psaD; photosystem I subunit II PsaD K02692 psaD; photosystem I subunit II D NK55_04475 psaE; photosystem I reaction center subunit IV PsaE K02693 psaE; photosystem I subunit IV D NK55_02120 psaF; photosystem I subunit III precursor, plastocyanin (cyt c553) docking protein PsaF K02694 psaF; photosystem I subunit III D NK55_02150 psaI; photosystem I reaction center subunit VIII PsaI K02696 psaI; photosystem I subunit VIII D NK55_02115 psaJ; photosystem I reaction centre subunit IX PsaJ K02697 psaJ; photosystem I subunit IX D NK55_07965 psaK2; alternative photosystem I reaction center subunit X PsaK2 K02698 psaK; photosystem I subunit X D NK55_02155 psaL; photosystem I reaction center subunit XI PsaL K02699 psaL; photosystem I subunit XI D NK55_01045 psaM; photosystem I reaction center subunit XII PsaM K02700 psaM; photosystem I subunit XII D NK55_10565 psaX; photosystem I 4.8K protein PsaX K02702 psaX; photosystem I 4.8kDa protein D NK55_11385 petA; cytochrome b6-f complex apocytochrome f subunit PetA K02634 petA; apocytochrome f D NK55_10485 petB; cytochrome b6-f complex subunit cytochrome b6 PetB K02635 petB; cytochrome b6 D NK55_11380 petC; cytochrome b6-f complex iron-sulfur subunit PetC K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D NK55_10490 petD; cytochrome b6-f complex subunit IV PetD K02637 petD; cytochrome b6-f complex subunit 4 D NK55_10960 petG; cytochrome b6-f complex subunit V PetG K02640 petG; cytochrome b6-f complex subunit 5 D NK55_02525 petM; cytochrome b6-f complex subunit VII PetM K02643 petM; cytochrome b6-f complex subunit 7 D NK55_10710 petN; cytochrome b6-f complex subunit VIII PetN K03689 petN; cytochrome b6-f complex subunit 8 D NK55_00100 petF; 2Fe-2S ferredoxin PetF K02639 petF; ferredoxin D NK55_03995 soluble [2Fe-2S] ferredoxin K02639 petF; ferredoxin D NK55_04915 2Fe-2S ferredoxin PetF-like protein K02639 petF; ferredoxin D NK55_08590 2Fe-2S ferredoxin PetF-like protein K02639 petF; ferredoxin D NK55_03860 petH; ferredoxin--NADP+ reductase PetH K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2] D NK55_03345 petJ1; cytochrome c6c (soluble cytochrome f) PetJ1 K08906 petJ; cytochrome c6 D NK55_11635 atpC; F1 ATP synthase complex epsilon subunit AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NK55_11630 atpD; F1 ATP synthase complex beta subunit AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NK55_03610 F1 ATP synthase complex gamma subunit AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NK55_07000 atpA; F1 ATP synthase complex alpha subunit AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NK55_06995 atpH; F1 ATP synthase complex delta subunit AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NK55_06985 atpG; F0 ATP synthase complex B' subunit AtpG K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NK55_06990 atpF; F0 ATP synthase complex B subunit AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NK55_06980 atpE; F0 ATP synthase complex subunit C AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NK55_06975 atpB; F0 ATP synthase complex subunit A AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a C 00196 Photosynthesis - antenna proteins [PATH:thn00196] D NK55_11370 apcA; allophycocyanin subunit alpha ApcA K02092 apcA; allophycocyanin alpha subunit D NK55_11365 apcB; allophycocyanin subunit beta ApcB K02093 apcB; allophycocyanin beta subunit D NK55_11360 apcC; phycobilisome small core linker polypeptide ApcC K02094 apcC; phycobilisome core linker protein D NK55_04390 apcD; allophycocyanin B alpha subunit ApcD K02095 apcD; allophycocyanin-B D NK55_08770 apcE; phycobilisome core-membrane linker phycobiliprotein ApcE K02096 apcE; phycobilisome core-membrane linker protein D NK55_08175 apcF; allophycocyanin beta chain ApcF K02097 apcF; phycobilisome core component D NK55_06485 cpcA; phycocyanin alpha subunit CpcA K02284 cpcA; phycocyanin alpha chain D NK55_06480 cpcB; phycocyanin beta subunit CpcB K02285 cpcB; phycocyanin beta chain D NK55_06490 cpcC; phycocyanin-associated rod linker protein CpcC K02286 cpcC; phycocyanin-associated rod linker protein D NK55_06495 cpcD; phycocyanin-associated rod-terminating linker protein CpcD K02287 cpcD; phycocyanin-associated, rod D NK55_06500 cpcE; phycocyanin alpha subunit phycocyanobilin lyase CpcE K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32] D NK55_06505 cpcF; phycocyanin alpha subunit phycocyanobilin lyase CpcF K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32] D NK55_06510 cpcG-1; phycobilisome rod-core linker protein cpcG K02290 cpcG; phycobilisome rod-core linker protein D NK55_06515 cpcG-2; phycobilisome rod-core linker protein cpcG K02290 cpcG; phycobilisome rod-core linker protein D NK55_06520 cpcG-3; phycobilisome rod-core linker protein cpcG K02290 cpcG; phycobilisome rod-core linker protein C 00710 Carbon fixation by Calvin cycle [PATH:thn00710] D NK55_04170 rbcL; ribulose bisophosphate carboxylase large subunit RbcL K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D NK55_04160 rbcS; ribulose bisphosphate carboxylase small subunit RbcS K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D NK55_07935 pgk; phosphoglycerate kinase PgK K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NK55_09295 gap1; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase Gap1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NK55_02785 gap2; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase Gap2 K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D NK55_03565 fbaA; class II fructose-1,6-bisphosphate aldolase FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NK55_11715 fbp; fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NK55_06020 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NK55_03395 rpiA; ribose-5-phosphate isomerase A RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NK55_06240 prk; phosphoribulokinase Prk K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D NK55_11410 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NK55_08755 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NK55_07170 talB; transaldolase TalB K00616 TALDO1; transaldolase [EC:2.2.1.2] D NK55_06230 pepC; phosphoenolpyruvate carboxylase PepC K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] C 00720 Other carbon fixation pathways [PATH:thn00720] D NK55_11895 putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_10345 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_06230 pepC; phosphoenolpyruvate carboxylase PepC K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NK55_04295 fumC; fumarate hydratase class II FumC K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NK55_02345 sdhA; succinate dehydrogenase flavoprotein subunit SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NK55_05430 sdhB; succinate dehydrogenase iron-sulfur subunit SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NK55_11460 hdrB; heterodisulfide reductase subunit B HdrB K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NK55_01260 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase, AcnB K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NK55_03195 accA; acetyl-CoA carboxylase carboxyltransferase alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NK55_03280 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NK55_05710 accC; acetyl-CoA carboxylase biotin carboxylase component AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NK55_04850 accD; acetyl-CoA carboxylase carboxyltransferase beta subunit AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NK55_09390 folD; bifunctional methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NK55_05510 metF; 5, 10-methylenetetrahydrofolate reductase MetF K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NK55_08900 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:thn00680] D NK55_07305 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NK55_01405 eno; 2-phosphopyruvate hydratase (enolase) Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NK55_06230 pepC; phosphoenolpyruvate carboxylase PepC K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NK55_03565 fbaA; class II fructose-1,6-bisphosphate aldolase FbaA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NK55_11715 fbp; fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NK55_03165 pfk; 6-phosphofructokinase Pfk K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NK55_08900 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NK55_11895 putative phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_10345 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NK55_09975 gpm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Gpm K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NK55_00440 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NK55_06840 comB; 2-phosphosulfolactate phosphatase ComB K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] D NK55_04740 cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2 CofH K11781 cofH; 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase [EC:2.5.1.147] D NK55_04200 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 CofG K11780 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase [EC:4.3.1.32] C 00910 Nitrogen metabolism [PATH:thn00910] D NK55_02225 nrtA; ABC-type nitrate/nitrite uptake system substrate-binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NK55_02230 nrtB; ABC-type nitrate/nitrite uptake system permease component NrtB K15577 nrtB; nitrate/nitrite transport system permease protein D NK55_02235 nrtC; ABC-type nitrate/nitrite uptake system ATPase component NrtC K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NK55_02240 nrtD; ABC-type nitrate/nitrite uptake system ATPase component NrtD K15579 nrtD; nitrate/nitrite transport system ATP-binding protein D NK55_02245 narB; assimilatory ferredoxin-nitrate reductase large subunit NarB K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2] D NK55_02220 nirA; assimilatory ferredoxin-nitrite reductase NirA K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1] D NK55_04785 glnA; glutamine synthetase type I GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NK55_02305 glsF; ferredoxin-dependent glutamate synthase GlsF K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] C 00920 Sulfur metabolism [PATH:thn00920] D NK55_00685 cysP; ABC-type sulfate/thiosulfate uptake system substrate-binding component CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D NK55_00680 cysT; ABC-type sulfate/thiosulfate uptake system permease component CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D NK55_00670 cysW; ABC-type sulfate/thiosulfate uptake system permease component CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D NK55_05085 cysA; sulfate/thiosulfate ABC uptake system ATPase component CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D NK55_01935 sat; dissimilatory sulfate adenylyltransferase Sat K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D NK55_04820 cysQ; 3'-5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NK55_11205 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NK55_01980 cysH; thioredoxin-dependent phosphoadenosine phosphosulfate reductase CysH K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D NK55_00370 sir; ferredoxin--sulfite reductase beta subunit Sir K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D NK55_00615 sqr; sulfide quinone reductase Sqr K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D NK55_04580 hydroxyacylglutathione hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D NK55_09005 thiosulfate sulfurtransferase (rhodanese-related) K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NK55_10835 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NK55_08680 cysK; cysteine synthase CysK K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:thn00061] D NK55_03195 accA; acetyl-CoA carboxylase carboxyltransferase alpha subunit AccA K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NK55_03280 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein AccB K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NK55_05710 accC; acetyl-CoA carboxylase biotin carboxylase component AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NK55_04850 accD; acetyl-CoA carboxylase carboxyltransferase beta subunit AccD K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NK55_06030 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein D NK55_09300 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NK55_10800 fabH; beta-ketoacyl-acyl carrier protein synthase III FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NK55_01575 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II FabB K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NK55_06025 fabF; 3-oxoacyl-(acyl carrier protein) synthase II FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NK55_04150 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NK55_05605 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NK55_05110 fabI; NADH-dependent enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NK55_03250 aas; long-chain-fatty-acid:[acyl-carrier protein] ligase (AMP-forming) Aas K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:thn00071] D NK55_03250 aas; long-chain-fatty-acid:[acyl-carrier protein] ligase (AMP-forming) Aas K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:thn00100] D NK55_01680 farnesyl-diphosphate farnesyltransferase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:thn00561] D NK55_10795 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NK55_01625 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NK55_09290 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NK55_04795 dgk; diacylglycerol kinase Dgk K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D NK55_05945 glycosyl transferase family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D NK55_09000 sqdB; UDP-sulfoquinovose synthase SqdB K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1] C 00564 Glycerophospholipid metabolism [PATH:thn00564] D NK55_07215 gpsA; NAD+ dependent glycerol-3-phosphate dehydrogenase GpsA K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NK55_01625 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NK55_09290 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NK55_04795 dgk; diacylglycerol kinase Dgk K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D NK55_07205 cdsA; phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NK55_03390 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:thn00600] D NK55_09535 hpnI; hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D NK55_01065 glycosyl hydrolase family 116 K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:thn00230] D NK55_06940 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NK55_04365 prsA; ribose-phosphate pyrophosphokinase PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NK55_05055 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NK55_05875 purD; phosphoribosylamine--glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NK55_08970 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NK55_07570 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D NK55_07580 purQ; phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NK55_05725 purM; phosphoribosylaminoimidazole synthetase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NK55_04075 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D NK55_11905 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NK55_04125 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NK55_05815 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NK55_04370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NK55_08910 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NK55_03400 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D NK55_05575 surE; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NK55_08130 yfiH; Zn-binding protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NK55_07590 guaB; inosine-5'-monophosphate dehydrogenase catalytic subunit GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NK55_00705 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NK55_05635 rdgB; non-canonical purine NTP pyrophosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NK55_02080 guaA; GMP synthase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NK55_09485 gmk; guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8] D NK55_03120 nrdJ; B12-dependent ribonucleotide reductase NrdJ K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2] D NK55_11900 bifunctional GTP pyrophosphokinase/guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NK55_05035 ppxA; exopolyphosphatase PpxA K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D NK55_02125 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D NK55_07995 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D NK55_09425 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D NK55_11660 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NK55_03980 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D NK55_09715 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D NK55_10375 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D NK55_01935 sat; dissimilatory sulfate adenylyltransferase Sat K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D NK55_09465 ureC; urease alpha subunit UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5] D NK55_00415 ureB; urease beta subunit UreB K01429 ureB; urease subunit beta [EC:3.5.1.5] D NK55_11465 ureA; urease gamma subunit UreA K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:thn00240] D NK55_08940 carB; carbamoyl phosphate synthase large subunit CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NK55_10320 carA; carbamoyl phosphate synthase small subunit CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NK55_04430 pyrB; aspartate carbamoyltransferase catalytic subunit PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NK55_01370 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NK55_04300 pyrC; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3] D NK55_11875 pyrD; FMN-dependent dihydroorotate dehydrogenase PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D NK55_05820 pyrE; orotate phosphoribosyltransferase PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NK55_09015 pyrF; orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NK55_09055 pyrH; uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NK55_00705 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NK55_03245 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NK55_10360 pyrG; CTP synthetase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2] D NK55_00740 panC; bifunctional pantoate beta-alanine ligase/cytidylate kinase PanC K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25] D NK55_03400 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D NK55_05575 surE; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NK55_05480 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D NK55_08165 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NK55_07130 codA; cytosine deaminase CodA K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D NK55_03120 nrdJ; B12-dependent ribonucleotide reductase NrdJ K00524 nrdJ; ribonucleotide reductase, class II [EC:1.17.4.2] D NK55_10685 dcd; deoxycytidine triphosphate deaminase Dcd K01494 dcd; dCTP deaminase [EC:3.5.4.13] D NK55_08285 tmk; thymidylate kinase Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:thn00250] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_02135 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NK55_01840 ansA2; L-asparaginase II (thermolabile) AnsA2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NK55_10030 ansA1; L-asparagine amidopeptidase AnsA1 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NK55_00870 asparagine synthetase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NK55_07200 ald; alanine dehydrogenase Ald K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NK55_10075 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NK55_00240 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NK55_11660 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NK55_05815 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NK55_04430 pyrB; aspartate carbamoyltransferase catalytic subunit PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NK55_00935 yneI; succinate-semialdehyde dehydrogenase (NADP+) YneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NK55_06905 putA; bifunctional proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NK55_04785 glnA; glutamine synthetase type I GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NK55_08940 carB; carbamoyl phosphate synthase large subunit CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NK55_10320 carA; carbamoyl phosphate synthase small subunit CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NK55_11980 glsA; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D NK55_07580 purQ; phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NK55_04000 glmS; glucosamine--fructose-6-phosphate aminotransferase isomerizing GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NK55_05055 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:thn00260] D NK55_05840 lysC; aspartate kinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D NK55_09560 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NK55_00675 thrA; homoserine dehydrogenase ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NK55_05485 thrB; homoserine kinase ThrB K00872 thrB; homoserine kinase [EC:2.7.1.39] D NK55_03925 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D NK55_11470 thrCII; threonine synthase ThrCII K01733 thrC; threonine synthase [EC:4.2.3.1] D NK55_07305 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NK55_09975 gpm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Gpm K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NK55_00440 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NK55_04710 gcvP; glycine dehydrogenase [decarboxylating] GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NK55_10250 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_05025 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NK55_07015 trpA; tryptophan synthase alpha subunit TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NK55_09230 trpB; tryptophan synthase beta subunit TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:thn00270] D NK55_10835 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NK55_08680 cysK; cysteine synthase CysK K01738 cysK; cysteine synthase [EC:2.5.1.47] D NK55_02020 metH; B12-dependent 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NK55_01715 metE; B12-independent 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NK55_11450 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NK55_03355 mtaP; 5'-methylthioadenosine phosphorylase MtaP K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D NK55_08130 yfiH; Zn-binding protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NK55_01850 mtnA; methylthioribose-1-phosphate isomerase MtnA K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D NK55_02215 ahcY; S-adenosyl-L-homocysteine hydrolase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NK55_05840 lysC; aspartate kinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D NK55_09560 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NK55_00675 thrA; homoserine dehydrogenase ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NK55_08785 protein of unknown function DUF39 K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D NK55_05650 ferredoxin K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D NK55_02760 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_08215 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_11115 gshB; glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_09005 thiosulfate sulfurtransferase (rhodanese-related) K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NK55_00440 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:thn00280] D NK55_02760 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_08215 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_06865 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:thn00290] D NK55_11120 leuC; 3-isopropylmalate dehydratase large subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NK55_03985 leuD; 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NK55_04725 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D NK55_03270 ilvB; acetolactate synthase catalytic subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_05790 kgd; TPP-dependent 2-oxoglutarate decarboxylase Kgd K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_10975 ilvH; acetolactate synthase regulatory subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NK55_07865 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NK55_01870 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NK55_02760 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_08215 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_05355 avtA; valine--pyruvate transaminase AvtA K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D NK55_02435 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D NK55_10825 cimA; (R)-citramalate synthase CimA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:thn00300] D NK55_00675 thrA; homoserine dehydrogenase ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NK55_05840 lysC; aspartate kinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D NK55_09560 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NK55_03900 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NK55_06625 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NK55_03115 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NK55_08065 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NK55_08525 dapL-2; LL-diaminopimelate aminotransferase DapL K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NK55_08255 dapL-1; LL-diaminopimelate aminotransferase DapL K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NK55_05465 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NK55_04010 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NK55_04400 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:thn00310] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_00935 yneI; succinate-semialdehyde dehydrogenase (NADP+) YneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:thn00220] D NK55_01630 argF; ornithine carbamoyltransferase ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D NK55_10075 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NK55_00240 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NK55_08695 arcA; L-arginine deiminase ArcA K27542 argZ; arginine dihydrolase [EC:3.5.3.27] D NK55_09465 ureC; urease alpha subunit UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5] D NK55_00415 ureB; urease beta subunit UreB K01429 ureB; urease subunit beta [EC:3.5.1.5] D NK55_11465 ureA; urease gamma subunit UreA K01430 ureA; urease subunit gamma [EC:3.5.1.5] D NK55_11980 glsA; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D NK55_07580 purQ; phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NK55_04785 glnA; glutamine synthetase type I GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NK55_08940 carB; carbamoyl phosphate synthase large subunit CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NK55_10320 carA; carbamoyl phosphate synthase small subunit CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_06225 argJ; bifunctional ornithine acetyltransferase / N-acetylglutamate synthase protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D NK55_02490 argB; acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D NK55_07720 argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D NK55_03115 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:thn00330] D NK55_02405 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D NK55_07130 codA; cytosine deaminase CodA K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D NK55_05705 speA; biosynthetic arginine decarboxylase SpeA K01585 speA; arginine decarboxylase [EC:4.1.1.19] D NK55_09770 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D NK55_09775 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D NK55_08695 arcA; L-arginine deiminase ArcA K27542 argZ; arginine dihydrolase [EC:3.5.3.27] D NK55_03890 proC; pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D NK55_06905 putA; bifunctional proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NK55_07260 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NK55_05195 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NK55_10340 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:thn00340] D NK55_01130 hisG; ATP phosphoribosyltransferase catalytic subunit HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D NK55_01125 hisZ; ATP phosphoribosyltransferase regulatory subunit HisZ K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D NK55_00885 hisIE; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D NK55_00960 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D NK55_04310 hisH; imidazole glycerol phosphate synthase amidotransferase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D NK55_09880 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D NK55_00645 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NK55_07855 hisD; histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D NK55_01810 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:thn00350] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_00645 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D NK55_00935 yneI; succinate-semialdehyde dehydrogenase (NADP+) YneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:thn00360] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_00645 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:thn00400] D NK55_04485 aroG; 3-deoxy-D-arabinoheptulosonate 7-phosphate (DAHP) synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NK55_00265 aroF; 3-deoxy-7-phosphoheptulonate synthase AroF K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NK55_10430 aroB; 3-dehydroquinate synthase AroB K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NK55_08635 aroQ; 3-dehydroquinate dehydratase II AroQ K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D NK55_10985 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D NK55_00345 aroA; 5-enolpyruvylshikimate-3-phosphate synthase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D NK55_07145 aroC; chorismate synthase AroC K01736 aroC; chorismate synthase [EC:4.2.3.5] D NK55_04995 trpE; anthranilate synthase alpha subunit TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NK55_02810 trpG; anthranilate synthase amidotransferase subunit TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NK55_05215 trpD; anthranilate phosphoribosyltransferase TrpD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D NK55_07950 trpF; N-(5'-phosphoribosyl)anthranilate isomerase TrpF K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D NK55_10015 trpC; indole-3-glycerol-phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D NK55_07015 trpA; tryptophan synthase alpha subunit TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NK55_09230 trpB; tryptophan synthase beta subunit TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NK55_05665 aroH-1; chorismate mutase II AroH K06208 aroH; chorismate mutase [EC:5.4.99.5] D NK55_05685 aroH-2; chorismate mutase II AroH K06208 aroH; chorismate mutase [EC:5.4.99.5] D NK55_00825 tyrA; prephenate dehydrogenase TyrA K15226 tyrAa; arogenate dehydrogenase (NADP+) [EC:1.3.1.78] D NK55_07195 pheA; prephenate dehydratase PheA K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_00645 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:thn00410] D NK55_00740 panC; bifunctional pantoate beta-alanine ligase/cytidylate kinase PanC K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25] D NK55_06865 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] C 00430 Taurine and hypotaurine metabolism [PATH:thn00430] D NK55_07285 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NK55_07200 ald; alanine dehydrogenase Ald K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NK55_08900 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:thn00450] D NK55_02020 metH; B12-dependent 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NK55_01715 metE; B12-independent 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NK55_08350 sufS; cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D NK55_06300 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NK55_01935 sat; dissimilatory sulfate adenylyltransferase Sat K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D NK55_10280 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:thn00460] D NK55_01940 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] D NK55_07285 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NK55_01840 ansA2; L-asparaginase II (thermolabile) AnsA2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NK55_10030 ansA1; L-asparagine amidopeptidase AnsA1 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NK55_07305 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:thn00470] D NK55_07135 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D NK55_11620 dldA; D-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NK55_11980 glsA; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D NK55_07580 purQ; phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D NK55_07140 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D NK55_09580 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NK55_08065 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NK55_05465 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:thn00480] D NK55_07285 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NK55_07510 hydrantoinase/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D NK55_11115 gshB; glutathione synthetase GshB K01920 gshB; glutathione synthase [EC:6.3.2.3] D NK55_05370 pepA; cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NK55_06670 ape2; alanine aminopeptidase Ape2 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NK55_01000 gst; glutathione S-transferase Gst K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NK55_04690 gor; glutathione reductase Gor K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D NK55_11860 gnd; 6-phosphogluconate dehydrogenase Gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NK55_11710 zwf; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NK55_10580 thioredoxin-dependent peroxidase PrxII family K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:thn00515] D NK55_00810 putative olichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:thn00514] D NK55_00810 putative olichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:thn00511] D NK55_00610 ams1; alpha-mannosidase Ams1 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D NK55_01065 glycosyl hydrolase family 116 K17108 GBA2; non-lysosomal glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:thn00540] D NK55_05610 lpxA-1; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NK55_07745 lpxA-2; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NK55_05600 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D NK55_09340 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NK55_00455 lpxB-1; lipid A disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NK55_05530 rfaE; bifunctional ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D NK55_07330 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D NK55_04760 rafE; glycerol-3-phosphate cytidylyltransferase RafE K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] C 00542 O-Antigen repeat unit biosynthesis [PATH:thn00542] D NK55_07310 tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:thn00541] D NK55_07665 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NK55_01380 ugdH; UDP-glucose dehydrogenase UgdH K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NK55_03805 NAD-dependent epimerase/dehydratase family protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NK55_07120 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NK55_07125 rfbB-2; dTDP-glucose 4,6-dehydratase RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NK55_10635 rfbC-2; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NK55_07115 rfbC-1; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NK55_11315 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NK55_10625 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D NK55_10630 rfbG; CDP-glucose 4,6-dehydratase RfbG K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D NK55_09405 rfbM; bifunctional mannose-1-phosphate guyanyltransferase / mannose-6-phosphate isomerase RfbM K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NK55_01530 gmd; GDP-mannose 4,6-dehydratase Gmd K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NK55_01535 wcaG; GDP-fucose synthetase WcaG K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D NK55_09025 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NK55_08205 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] C 00550 Peptidoglycan biosynthesis [PATH:thn00550] D NK55_10400 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NK55_03535 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NK55_03540 murC; UDP-N-acetylmuramate-L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NK55_09580 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NK55_04010 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NK55_11620 dldA; D-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NK55_04400 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NK55_05475 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NK55_10175 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NK55_11435 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NK55_05715 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NK55_03695 mrdA; cell elongation-specific transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NK55_08375 ftsI; cell division-specific transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NK55_02335 dacB-1; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NK55_11230 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00552 Teichoic acid biosynthesis [PATH:thn00552] D NK55_10175 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NK55_07310 tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D NK55_02620 rffM-1; UDP-N-acetyl-D-mannosaminuronic acid transferase RffM K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D NK55_07105 rffM-2; UDP-N-acetyl-D-mannosaminuronic acid transferase RffM K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D NK55_05450 cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D NK55_08830 cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:thn00543] D NK55_07310 tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D NK55_10835 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:thn00730] D NK55_00395 thiC; hydroxymethylpyrimidine phosphate synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D NK55_09790 iscS1; cysteine desulfurase IscS1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_11140 iscS2; cysteine desulfurase IscS2 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_08750 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D NK55_01580 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NK55_09540 thiG; thiazole synthase ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D NK55_06430 thiE; thiamin-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D NK55_08765 thiL; thiamine monophosphate kinase ThiL K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D NK55_11500 engC; ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NK55_09715 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:thn00740] D NK55_05280 ribAB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein RibAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NK55_07420 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NK55_09550 ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D NK55_05070 ribE; riboflavin synthase alpha subunit RibE K00793 ribE; riboflavin synthase [EC:2.5.1.9] D NK55_04420 ribF; bifunctional riboflavin kinase / FMN adenylyltransferase RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D NK55_06940 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NK55_02000 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:thn00750] D NK55_00410 pdxH; pyridoxamine 5'-phosphate oxidase PdxH K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NK55_10770 pdxJ; pyridoxine 5'-phosphate synthase PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D NK55_03925 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D NK55_11470 thrCII; threonine synthase ThrCII K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:thn00760] D NK55_02135 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NK55_00895 nadA; quinolinate synthetase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NK55_05210 nadC; quinolinate phosphoribosyltransferase (carboxylating) NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NK55_03510 pncB; nicotinate phosphoribosyltransferase PcnB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D NK55_03400 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D NK55_05575 surE; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NK55_03515 nadD; nicotinic acid mononucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NK55_03525 nadE; glutamine-dependent NAD(+) synthetase NadE K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NK55_10865 ppnK-2; NAD kinase (phosphorylating) PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NK55_08575 ppnK-1; NAD kinase (phosphorylating) PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NK55_09995 pntA; nicotinamide nucleotide transhydrogenase alpha chain part 1 PntA K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NK55_10000 pntC; nicotinamide nucleotide transhydrogenase alpha chain part 2 PntC K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NK55_10010 pntB; nicotinamide nucleotide transhydrogenase beta subunit PntB K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D NK55_00935 yneI; succinate-semialdehyde dehydrogenase (NADP+) YneI K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:thn00770] D NK55_03270 ilvB; acetolactate synthase catalytic subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_05790 kgd; TPP-dependent 2-oxoglutarate decarboxylase Kgd K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NK55_10975 ilvH; acetolactate synthase regulatory subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NK55_07865 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NK55_01870 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NK55_00660 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D NK55_00740 panC; bifunctional pantoate beta-alanine ligase/cytidylate kinase PanC K13799 panC-cmk; pantoate ligase / CMP/dCMP kinase [EC:6.3.2.1 2.7.4.25] D NK55_02930 coaX; pantothenate kinase type III CoaX K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NK55_09190 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NK55_03460 coaD; phosphopantetheine adenylyltransferase CoaD K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NK55_11070 coaE; dephospho-CoA kinase CoaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D NK55_05285 acpT; 4'-phosphopantetheinyl transferase AcpT K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D NK55_02760 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_08215 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:thn00780] D NK55_01575 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II FabB K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NK55_06025 fabF; 3-oxoacyl-(acyl carrier protein) synthase II FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NK55_04150 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NK55_05605 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NK55_05110 fabI; NADH-dependent enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NK55_03100 bioF; 8-amino-7-oxononanoate synthase BioF K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NK55_06370 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NK55_01005 bioD; dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D NK55_01395 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D NK55_01605 birA; bifunctional biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:thn00785] D NK55_10735 lipB; lipoate-protein ligase B (lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferase) LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D NK55_00045 lipA1; lipoyl synthase LipA1 K03644 lipA; lipoyl synthase [EC:2.8.1.8] D NK55_00910 lplA; lipoate-protein ligase A LplA K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_03480 pdhA; pyruvate dehydrogenase E1 component alpha subunit PdhA K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D NK55_01010 pdhB; pyruvate dehydrogenase E1 component beta subunit PdhB K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D NK55_03260 pdhC; pyruvate dehydrogenase dihydrolipoamide acetyltransferase E2 component PdhC K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NK55_04710 gcvP; glycine dehydrogenase [decarboxylating] GcvP K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NK55_10250 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NK55_05025 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:thn00790] D NK55_03205 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NK55_10260 folB; dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NK55_01145 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NK55_04240 folP; dihydropteroate synthase FolP K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NK55_01080 folC; bifunctional dihydrofolate synthase / folylpolyglutamate synthase FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D NK55_05280 ribAB; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein RibAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NK55_00625 pabB; aminodeoxychorismate synthase aminase subunit PabB K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D NK55_01685 queD; 6-pyruvoyl tetrahydrobiopterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NK55_05800 phhB; pterin-4a-carbinolamine dehydratase PhhB K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NK55_11050 queE; queuosine biosynthesis radical SAM protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NK55_05300 queC; queuosine biosynthesis ATPase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NK55_00950 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NK55_02280 moaA; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NK55_02275 moaC_MobA; bifunctional molybdenum cofactor biosynthesis protein MoaC / molybdopterin-guanine dinucleotide biosynthesis protein MobA K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NK55_02265 moaE; molybdenum converting factor subunit 2 MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NK55_02285 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:thn00670] D NK55_09390 folD; bifunctional methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NK55_07305 glyA; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NK55_08970 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NK55_04370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NK55_06040 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NK55_10250 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NK55_02020 metH; B12-dependent 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NK55_01115 purU; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D NK55_05510 metF; 5, 10-methylenetetrahydrofolate reductase MetF K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NK55_11455 ygfA; 5-formyltetrahydrofolate cyclo-ligase YgfA K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:thn00860] D NK55_08690 gltX; non-discriminating glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NK55_05330 hemA; glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D NK55_08555 hemL; glutamate-1-semialdehyde aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NK55_06930 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NK55_04865 hemC; porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D NK55_10230 hemE; uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D NK55_01295 hemF; oxygen-dependent coproporphyrinogen III oxidase HemF K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D NK55_05245 hemN; oxygen-independent coproporphyrinogen III oxidase HemN K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NK55_03555 hemY; protoporphyrinogen oxidase HemY K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D NK55_07705 hemH; ferrochelatase protoheme ferro-lyase HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NK55_07430 cysG_hemD; bifunctional uroporphyrin-III synthase / uroporphyrin-III methyltransferase CysGHemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D NK55_06130 ctaB; heme O synthase protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D NK55_06135 ctaA1; heme A synthase cytochrome oxidase biogenesis protein CtaA1 K02259 COX15; heme a synthase [EC:1.17.99.9] D NK55_02440 cbiK; sirohydrochlorin cobaltochelatase CbiK K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D NK55_02705 cbiL; cobalt-precorrin-2 C20-methyltransferase CbiL K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D NK55_03220 cbiGH; bifunctional cobalt-precorrin-3b C17-methyltransferase / cobalamin biosynthesis protein CbiGH K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D NK55_11795 cbiF; anaerobic cobalt-precorrin-4 C11-methyltransferase CbiF K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D NK55_01865 cbiJ; anaerobic cobalt precorrin-6x reductase CbiJ K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D NK55_10355 cbiD; anaerobic cobalt-precorrin-6 synthase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D NK55_01180 cbiET; bifunctional cobalt precorrin-6y C5-methyltransferase / C15-methyltransferase (decarboxylating) CbiET K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D NK55_04195 cobL; cobalt precorrin-6Y C15-methyltransferase (decarboxylating) CbiT K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D NK55_01830 cbiC2; precorrin isomerase precorrin-8X methylmutase CbiC2 K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D NK55_01170 cbiC1; anaerobic precorrin isomerase precorrin-8X methylmutase CbiC1 K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D NK55_05915 cbiA; cobyrinic acid ac-diamide synthase CbiA K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D NK55_11080 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D NK55_11155 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NK55_00715 btuR-1; cob(I)alamin adenosyltransferase BtuR K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NK55_07805 btuR-2; cob(I)alamin adenosyltransferase BtuR K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NK55_05225 cbiP; cobyric acid synthase CbiP K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D NK55_11570 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D NK55_01640 cobP; bifunctional adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase CobP K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D NK55_03075 cobS; adenosylcobinamide-GDP ribazoletransferase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D NK55_00690 chlH; Mg-protoporphyrin IX chelatase subunit H ChlH K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1] D NK55_04185 bchD-1; Mg-protoporphyrin IX chelatase ATPase subunit ChlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D NK55_07090 chlM; Mg-protoporphyrin O-methyltransferase ChlM K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] D NK55_02575 acsF1; oxygen-dependent Mg protoporphyrin IX monomethyl ester oxidative cyclase AcsF1 K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] D NK55_05260 acsF2; low oxygen-dependent Mg protoporphyrin IX monomethyl ester oxidative cyclase AcsF2 K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] D NK55_05905 cvrA; putative 38-divinyl(proto)chlorophyll(ide) CvrA K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13] D NK55_11855 por; light-dependent protochlorophyllide oxidoreductase Por K00218 por; protochlorophyllide reductase [EC:1.3.1.33] D NK55_08865 chlL; light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7] D NK55_02205 chlB; light-independent protochlorophyllide reductase subunit B ChlB K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7] D NK55_04330 chlG; chlorophyll a synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] D NK55_09970 chlP; geranylgeranyl hydrogenase ChlP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] D NK55_00245 hox1; heme oxygenase (decyclizing) Hox1 K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] D NK55_05250 hox2; heme oxygenase 2 Hox2 K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] D NK55_08135 pcyA; phycocyanobilin:ferredoxin oxidoreductase PcyA K05371 pcyA; phycocyanobilin:ferredoxin oxidoreductase [EC:1.3.7.5] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:thn00130] D NK55_04450 ycf21; protein of unknown function DUF98 YCF21 K03181 ubiC; chorismate lyase [EC:4.1.3.40] D NK55_06845 plqA; 4-hydroxybenzoate solanesyltransferase PlqA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NK55_07750 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D NK55_02000 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D NK55_08040 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase UbiH K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D NK55_03865 menF; isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D NK55_03505 menC; O-succinylbenzoate synthase MenC K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D NK55_03910 menE; O-succinylbenzoic acid--CoA ligase MenE K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D NK55_09105 menB; 1,4-dihydroxy-2-naphthoate synthase MenB K01661 menB; naphthoate synthase [EC:4.1.3.36] D NK55_08595 dncH; 1,4-dihydroxy-2-naphthoyl-CoA thioesterease DncH K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D NK55_07630 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase MenA K23094 ABC4; 2-carboxy-1,4-naphthoquinone phytyltransferase [EC:2.5.1.130] D NK55_02985 ndbB; type II NADH dehydrogenase B NdbB K17872 NDC1; demethylphylloquinone reductase [EC:1.6.5.12] D NK55_08730 menG; 2-heptaprenyl-1,4-naphthoquinone methyltransferase MenG K23095 MENG; demethylphylloquinol methyltransferase [EC:2.1.1.329] D NK55_05270 vte3; bifunctional 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase / 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase Vte3 K18534 K18534; MPBQ/MSBQ methyltransferase [EC:2.1.1.295] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:thn00900] D NK55_01580 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NK55_01960 ispC; 1-deoxy-D-xylulose 5-phosphate reductoisomerase IspC K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D NK55_00015 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D NK55_08655 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D NK55_08180 ispF; 2-C-methyl-D-erythritol 24-cyclodiphosphate synthase IspF K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D NK55_00215 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D NK55_01950 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D NK55_02000 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D NK55_02460 fni; FMN-dependent isopentenyl-diphosphate delta-isomerase Fni K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D NK55_09395 crtE; geranylgeranyl diphosphate synthase type II CrtE K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NK55_05445 sdsA; solanesyl diphosphate synthase SdsA K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85] D NK55_05475 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NK55_09970 chlP; geranylgeranyl hydrogenase ChlP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:thn00909] D NK55_01680 farnesyl-diphosphate farnesyltransferase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D NK55_08140 sqhC; squalene-hopene cyclase SqhC K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129] C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:thn00906] D NK55_04440 crtB; phytoene synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D NK55_04445 crtP; phytoene dehydrogenase CrtP K02293 PDS; 15-cis-phytoene desaturase [EC:1.3.5.5] D NK55_09945 nnrU; zeta-carotene isomerase nnrU K15744 Z-ISO; zeta-carotene isomerase [EC:5.2.1.12] D NK55_00380 crtQ; carotene 7,8-desaturase CrtQ K00514 ZDS; zeta-carotene desaturase [EC:1.3.5.6] D NK55_02970 cruA; lycopene cyclase CruA K14605 cruA; lycopene cyclase CruA [EC:5.5.1.19] D NK55_06170 crtR; beta-carotene oxygenase CrtR K02294 crtR; beta-carotene hydroxylase [EC:1.14.13.-] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NK55_06020 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:thn00523] D NK55_07120 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NK55_07125 rfbB-2; dTDP-glucose 4,6-dehydratase RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NK55_10635 rfbC-2; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NK55_07115 rfbC-1; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NK55_11315 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D NK55_03865 menF; isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D NK55_07125 rfbB-2; dTDP-glucose 4,6-dehydratase RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:thn00946] D NK55_01940 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D NK55_07240 pbpA; penicillin binidng protein PbpA K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:thn00332] D NK55_07260 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NK55_05195 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NK55_10340 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:thn00261] D NK55_01935 sat; dissimilatory sulfate adenylyltransferase Sat K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D NK55_05840 lysC; aspartate kinase LysC K00928 lysC; aspartate kinase [EC:2.7.2.4] D NK55_09560 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NK55_03900 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NK55_06625 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:thn00521] D NK55_04120 glcK-1; glucokinase GlcK K00845 glk; glucokinase [EC:2.7.1.2] D NK55_06580 pgm; phosphoglucomutase Pgm K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NK55_04925 suhB; myo-inositol-1-phosphate phosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NK55_07265 histidinol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NK55_07120 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NK55_07125 rfbB-2; dTDP-glucose 4,6-dehydratase RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NK55_10635 rfbC-2; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NK55_07115 rfbC-1; dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NK55_11315 rfbD; dTDP-6-deoxy-L-mannose-dehydrogenase RfbD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D NK55_04120 glcK-1; glucokinase GlcK K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:thn00525] D NK55_07120 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NK55_07125 rfbB-2; dTDP-glucose 4,6-dehydratase RfbB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:thn00401] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_00645 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D NK55_04995 trpE; anthranilate synthase alpha subunit TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NK55_02810 trpG; anthranilate synthase amidotransferase subunit TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NK55_09300 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NK55_04150 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NK55_05110 fabI; NADH-dependent enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NK55_06030 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:thn00999] D NK55_11450 metK; S-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NK55_01940 glycoside hydrolase family 3 K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D NK55_02000 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:thn00364] D NK55_02560 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:thn00625] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:thn00361] D NK55_02560 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:thn00623] D NK55_02560 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D NK55_09465 ureC; urease alpha subunit UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5] D NK55_00415 ureB; urease beta subunit UreB K01429 ureB; urease subunit beta [EC:3.5.1.5] D NK55_11465 ureA; urease gamma subunit UreA K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:thn00626] D NK55_00915 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:thn03020] D NK55_01485 rpoB; DNA-directed RNA polymerase beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NK55_01490 rpoC1; DNA-directed RNA polymerase gamma subunit RpoC1 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NK55_01495 rpoC2; DNA-directed RNA polymerase delta subunit RpoC2 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NK55_09740 rpoA; DNA-directed RNA polymerase alpha subunit RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NK55_07880 rpoZ; DNA-directed RNA polymerase omega subunit RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:thn03010] D NK55_08235 rpsA; 30S ribosomal protein S1 RpsA K02945 RP-S1; small subunit ribosomal protein S1 D NK55_05075 rpsB; 30S ribosomal protein S2 RpsB K02967 RP-S2; small subunit ribosomal protein S2 D NK55_09650 rpsC; 30S ribosomal protein S3 RpsC K02982 RP-S3; small subunit ribosomal protein S3 D NK55_09955 rpsD; 30S ribosomal protein S4 RpsD K02986 RP-S4; small subunit ribosomal protein S4 D NK55_09700 rpsE; 30S ribosomal protein S5 RpsE K02988 RP-S5; small subunit ribosomal protein S5 D NK55_03365 rpsF; 30S ribosomal protein S6 RpsF K02990 RP-S6; small subunit ribosomal protein S6 D NK55_05385 rpsG; 30S ribosomal protein S7 RpsG K02992 RP-S7; small subunit ribosomal protein S7 D NK55_09685 rpsH; 30S ribosomal protein S8 RpsH K02994 RP-S8; small subunit ribosomal protein S8 D NK55_09760 rpsI; 30S ribosomal protein S9 RpsI K02996 RP-S9; small subunit ribosomal protein S9 D NK55_05400 rpsJ; 30S ribosomal protein S10 RpsJ K02946 RP-S10; small subunit ribosomal protein S10 D NK55_09735 rpsK; 30S ribosomal protein S11 RpsK K02948 RP-S11; small subunit ribosomal protein S11 D NK55_09730 rpsM; 30S ribosomal protein S13 RpsM K02952 RP-S13; small subunit ribosomal protein S13 D NK55_05805 rpsN; 30S ribosomal protein S14 RpsN K02954 RP-S14; small subunit ribosomal protein S14 D NK55_03840 rpsO; 30S ribosomal protein S15 RpsO K02956 RP-S15; small subunit ribosomal protein S15 D NK55_09305 rpsP; 30S ribosomal protein S16 RpsP K02959 RP-S16; small subunit ribosomal protein S16 D NK55_09665 rpsQ; 30S ribosomal protein S17 RpsQ K02961 RP-S17; small subunit ribosomal protein S17 D NK55_08310 rpsR; 30S ribosomal protein S18 RpsR K02963 RP-S18; small subunit ribosomal protein S18 D NK55_09640 rpsS; 30S ribosomal protein S19 RpsS K02965 RP-S19; small subunit ribosomal protein S19 D NK55_03740 rpsT; 30S ribosomal protein S20 RpsT K02968 RP-S20; small subunit ribosomal protein S20 D NK55_09315 rpsU; 30S ribosomal protein S21 RpsU K02970 RP-S21; small subunit ribosomal protein S21 D NK55_00575 rplA; 50S ribosomal protein L1 RplA K02863 RP-L1; large subunit ribosomal protein L1 D NK55_09635 rplB; 50S ribosomal protein L2 RplB K02886 RP-L2; large subunit ribosomal protein L2 D NK55_09620 rplC; 50S ribosomal protein L3 RplC K02906 RP-L3; large subunit ribosomal protein L3 D NK55_09680 rplE; 50S ribosomal protein L5 RplE K02931 RP-L5; large subunit ribosomal protein L5 D NK55_09690 rplF; 50S ribosomal protein L6 RplF K02933 RP-L6; large subunit ribosomal protein L6 D NK55_00565 rplL; 50S ribosomal protein L7/L12 RplL K02935 RP-L7; large subunit ribosomal protein L7/L12 D NK55_02110 rplI; 50S ribosomal protein L9 RplI K02939 RP-L9; large subunit ribosomal protein L9 D NK55_00570 rplJ; 50S ribosomal protein L10 RplJ K02864 RP-L10; large subunit ribosomal protein L10 D NK55_00580 rplK; 50S ribosomal protein L11 RplK K02867 RP-L11; large subunit ribosomal protein L11 D NK55_09755 rplM; 50S ribosomal protein L13 RplM K02871 RP-L13; large subunit ribosomal protein L13 D NK55_09670 rplN; 50S ribosomal protein L14 RplN K02874 RP-L14; large subunit ribosomal protein L14 D NK55_09705 rplO; 50S ribosomal protein L15 RplO K02876 RP-L15; large subunit ribosomal protein L15 D NK55_09655 rplP; 50S ribosomal protein L16 RplP K02878 RP-L16; large subunit ribosomal protein L16 D NK55_09745 rplQ; 50S ribosomal protein L17 RplQ K02879 RP-L17; large subunit ribosomal protein L17 D NK55_09695 rplR; 50S ribosomal protein L18 RplR K02881 RP-L18; large subunit ribosomal protein L18 D NK55_03240 rplS; 50S ribosomal protein L19 RplS K02884 RP-L19; large subunit ribosomal protein L19 D NK55_07445 rplT; 50S ribosomal protein L20 RplT K02887 RP-L20; large subunit ribosomal protein L20 D NK55_01200 rplU; 50S ribosomal protein L21 RplU K02888 RP-L21; large subunit ribosomal protein L21 D NK55_09645 rplV; 50S ribosomal protein L22 RplV K02890 RP-L22; large subunit ribosomal protein L22 D NK55_09630 rplW; 50S ribosomal protein L23 RplW K02892 RP-L23; large subunit ribosomal protein L23 D NK55_09675 rplX; 50S ribosomal protein L24 RplX K02895 RP-L24; large subunit ribosomal protein L24 D NK55_11655 rplY; 50S ribosomal protein L25 RplY K02897 RP-L25; large subunit ribosomal protein L25 D NK55_01205 rpmA; 50S ribosomal protein L27 RpmA K02899 RP-L27; large subunit ribosomal protein L27 D NK55_09165 rpmB; 50S ribosomal protein L28 RpmB K02902 RP-L28; large subunit ribosomal protein L28 D NK55_09660 rpmC; 50S ribosomal protein L29 RpmC K02904 RP-L29; large subunit ribosomal protein L29 D NK55_09765 rpmE; 50S ribosomal protein L31 RpmE K02909 RP-L31; large subunit ribosomal protein L31 D NK55_06245 rpmF; 50S ribosomal protein L32 RpmF K02911 RP-L32; large subunit ribosomal protein L32 D NK55_08305 rpmG; 50S ribosomal protein L33 RpmG K02913 RP-L33; large subunit ribosomal protein L33 D NK55_11995 rpmH; 50S ribosomal protein L34 RpmH K02914 RP-L34; large subunit ribosomal protein L34 D NK55_07450 rpmI; 50S ribosomal protein L35 RpmI K02916 RP-L35; large subunit ribosomal protein L35 D NK55_09725 rpmJ; 50S ribosomal protein L36 RpmJ K02919 RP-L36; large subunit ribosomal protein L36 D NK55_07830 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NK55_07815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NK55_07810 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:thn00970] D NK55_07820 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NK55_08385 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NK55_04320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NK55_03310 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_03570 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_09060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_06720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_04405 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NK55_05870 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NK55_00365 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NK55_05090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NK55_08810 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NK55_09870 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NK55_05415 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NK55_00955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NK55_02745 tRNA-His K14226 tRNA-His; tRNA His D NK55_07825 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NK55_10265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_01720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_09155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_03580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_05100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NK55_00305 tRNA-Met K14230 tRNA-Met; tRNA Met D NK55_08515 tRNA-Met K14230 tRNA-Met; tRNA Met D NK55_09785 tRNA-OTHER K14230 tRNA-Met; tRNA Met D NK55_06575 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NK55_02415 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NK55_00530 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NK55_01890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NK55_01165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_01520 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_03795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_08155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_00840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NK55_06290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NK55_11665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NK55_03235 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NK55_08005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NK55_09020 tRNA-Val K14237 tRNA-Val; tRNA Val D NK55_00285 tRNA-Val K14237 tRNA-Val; tRNA Val D NK55_01705 tRNA-Val K14237 tRNA-Val; tRNA Val D NK55_08690 gltX; non-discriminating glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NK55_00070 gatA; aspartyl-tRNA / glutamyl-tRNA amidotransferase subunit A GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NK55_02190 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NK55_04250 gatC; bifunctional aspartyl/glutamyl-tRNA amidotransferase subunit C GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NK55_08530 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NK55_02955 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NK55_09225 asnC; asparaginyl-tRNA synthetase AsnC K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NK55_01985 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NK55_07605 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NK55_07645 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NK55_04395 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NK55_05810 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NK55_10280 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NK55_06040 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NK55_04155 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NK55_08500 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NK55_08950 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NK55_00975 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NK55_10700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NK55_10390 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NK55_06155 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NK55_01275 pheS; phenylalanyl-tRNA synthetase alpha subunit PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NK55_01390 pheT; phenylalanyl-tRNA synthetase beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NK55_09255 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:thn03060] D NK55_09710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NK55_00590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NK55_01660 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NK55_01020 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NK55_11985 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NK55_05930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NK55_06560 ffh; signal recognition particle subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NK55_11210 ftsY; signal recognition particle docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NK55_05890 arsA-1; arsenite-activated anion-transporting ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D NK55_02375 mttA; twin-arginine protein translocation system component MttA K03116 tatA; sec-independent protein translocase protein TatA D NK55_11350 tatC; twin-arginine protein translocation system component TatC K03118 tatC; sec-independent protein translocase protein TatC D NK55_05785 lepB2; signal peptidase I LepB2 K03100 lepB; signal peptidase I [EC:3.4.21.89] D NK55_06855 lepB1; thylakoid signal peptidase I LepB1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D NK55_02065 lspA; lipoprotein signal peptidase II LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:thn04122] D NK55_09790 iscS1; cysteine desulfurase IscS1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_11140 iscS2; cysteine desulfurase IscS2 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_09005 thiosulfate sulfurtransferase (rhodanese-related) K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NK55_07875 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NK55_02265 moaE; molybdenum converting factor subunit 2 MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NK55_02280 moaA; molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NK55_02270 moaD; molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein D NK55_11475 ThiS domain-containing protein K03636 moaD; sulfur-carrier protein D NK55_02160 thiF; sulfur carrier protein adenylyltransferase ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D NK55_02275 moaC_MobA; bifunctional molybdenum cofactor biosynthesis protein MoaC / molybdopterin-guanine dinucleotide biosynthesis protein MobA K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NK55_10555 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:thn03018] D NK55_11970 rne; ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12] D NK55_01405 eno; 2-phosphopyruvate hydratase (enolase) Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NK55_07610 pnpA; polynucleotide phosphorylase/polyadenylase PnpA K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NK55_10505 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NK55_03905 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D NK55_07405 dnaK3; molecular chaperone DnaK3 K04043 dnaK; molecular chaperone DnaK D NK55_05305 dnaK2; molecular chaperone DnaK2 K04043 dnaK; molecular chaperone DnaK D NK55_10460 dnaK1; molecular chaperone DnaK1 K04043 dnaK; molecular chaperone DnaK D NK55_02510 groEL2; 60 kDa chaperonin protein GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_01105 groEL1; heat shock protein 60 family chaperone GroEL1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_08075 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NK55_00965 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] B B 09124 Replication and repair C 03030 DNA replication [PATH:thn03030] D NK55_08280 dnaEC; DNA polymerase III alpha subunit DnaEC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08345 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_00865 dnaX; DNA-directed DNA polymerase III gamma and tau subunits DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NK55_11600 holB; DNA polymerase III delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NK55_04510 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NK55_08860 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NK55_02105 dnaB; primary replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NK55_03160 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D NK55_04095 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D NK55_01385 rnhB; ribonuclease HII RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NK55_10860 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:thn03410] D NK55_04840 nth; endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NK55_01780 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NK55_07385 N-methylpurine-DNA glycosirase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D NK55_04465 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NK55_06470 uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NK55_05580 xth; exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NK55_04025 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NK55_10860 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:thn03420] D NK55_11345 mfd; transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NK55_01110 uvrA; excinuclease ABC subunit A UvrA K03701 uvrA; excinuclease ABC subunit A D NK55_08170 uvrB; excinuclease ABC subunit B UvrB K03702 uvrB; excinuclease ABC subunit B D NK55_05410 uvrC; excinuclease ABC subunit C UvrC K03703 uvrC; excinuclease ABC subunit C D NK55_00500 UvrD/REP helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NK55_09110 pcrA; ATP-dependent DNA helicase II PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NK55_10860 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:thn03430] D NK55_09180 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D NK55_00500 UvrD/REP helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NK55_09110 pcrA; ATP-dependent DNA helicase II PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NK55_04025 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NK55_04095 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D NK55_08280 dnaEC; DNA polymerase III alpha subunit DnaEC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08345 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08860 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NK55_00865 dnaX; DNA-directed DNA polymerase III gamma and tau subunits DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NK55_04510 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NK55_11600 holB; DNA polymerase III delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NK55_10860 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NK55_04530 type II restriction-modification system GATC-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:thn03440] D NK55_04025 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NK55_04095 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D NK55_00775 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF D NK55_07755 recO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NK55_07655 recR; recombination protein RecR K06187 recR; recombination protein RecR D NK55_08460 recA; recombinase A RecA K03553 recA; recombination protein RecA D NK55_11670 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NK55_07860 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NK55_02975 ruvC; Holliday junction resolvase RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NK55_10165 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NK55_08280 dnaEC; DNA polymerase III alpha subunit DnaEC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08345 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08860 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NK55_00865 dnaX; DNA-directed DNA polymerase III gamma and tau subunits DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NK55_04510 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NK55_11600 holB; DNA polymerase III delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NK55_06895 priA; primosome assembly protein N' PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:thn02010] D NK55_00685 cysP; ABC-type sulfate/thiosulfate uptake system substrate-binding component CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D NK55_00680 cysT; ABC-type sulfate/thiosulfate uptake system permease component CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D NK55_00670 cysW; ABC-type sulfate/thiosulfate uptake system permease component CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D NK55_05085 cysA; sulfate/thiosulfate ABC uptake system ATPase component CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D NK55_02225 nrtA; ABC-type nitrate/nitrite uptake system substrate-binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NK55_02230 nrtB; ABC-type nitrate/nitrite uptake system permease component NrtB K15577 nrtB; nitrate/nitrite transport system permease protein D NK55_02235 nrtC; ABC-type nitrate/nitrite uptake system ATPase component NrtC K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NK55_02240 nrtD; ABC-type nitrate/nitrite uptake system ATPase component NrtD K15579 nrtD; nitrate/nitrite transport system ATP-binding protein D NK55_06690 cmpA; high-affinity ABC-type bicarbonate uptake system substrate-binding component CmpA K11950 cmpA; bicarbonate transport system substrate-binding protein D NK55_06695 cmpB; high-affinity ABC-type bicarbonate uptake system permease component CmpB K11951 cmpB; bicarbonate transport system permease protein D NK55_06705 cmpD; high-affinity ABC-type bicarbonate uptake system ATPase component CmpD K11953 cmpD; bicarbonate transport system ATP-binding protein [EC:7.3.2.-] D NK55_11575 futA; ABC-type FeII uptake system substrate-binding component FutA K02012 afuA; iron(III) transport system substrate-binding protein D NK55_05205 futB; ABC-type FeII uptake system permease component FutB K02011 afuB; iron(III) transport system permease protein D NK55_04100 futC; ABC-type FeII uptake system ATPase component FutC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D NK55_01225 ABC-type sugar transport system ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NK55_05440 ABC-type sugar uptake system ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NK55_08245 ABC-type sugar uptake system substrate-binding component K17244 chiE; putative chitobiose transport system substrate-binding protein D NK55_10310 ABC-type sugar transport system permease component K17245 chiF; putative chitobiose transport system permease protein D NK55_02355 ABC-type sugar transport system permease component K17246 chiG; putative chitobiose transport system permease protein D NK55_02140 protein of unknown function mce family Ycf22 K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NK55_02680 ycf63; membrane protein of unknown function DUF140 Ycf63 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NK55_00425 ABC-type transport system ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NK55_00025 ABC-type transport system substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein D NK55_05950 ABC-type transport system substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein D NK55_07475 pstS; ABC-type phosphate uptake system substrate-binding component PstS K02040 pstS; phosphate transport system substrate-binding protein D NK55_07480 pstC; ABC-type phosphate uptake system permease component PstC K02037 pstC; phosphate transport system permease protein D NK55_07485 pstA; ABC-type phosphate uptake system permease component PstA K02038 pstA; phosphate transport system permease protein D NK55_07490 pstB; ABC-type phosphate uptake system ATPase component PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NK55_10965 ABC-type amino acid transport system substrate-binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D NK55_05030 livH; ABC-type branched-chain amino acid uptake system permease component LivH K01997 livH; branched-chain amino acid transport system permease protein D NK55_11740 livM; branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D NK55_07235 livG; ABC-type branched-chain amino acid uptake system ATPase component LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D NK55_06715 livF; ABC-type branched-chain amino acid transport system ATPase component LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D NK55_03150 natC; ABC-type netural amino acid transport system permease component NatC K11955 natC; neutral amino acid transport system permease protein D NK55_04765 natD; ABC-type netural amino acid transport system permease protein NatD K11956 natD; neutral amino acid transport system permease protein D NK55_03155 natA; ABC-type neutral amino acid transport system ATPase component NatA K11957 natA; neutral amino acid transport system ATP-binding protein D NK55_09490 natE; ABC-type neutral amino acid uptake sytem ATPase component NatE K11958 natE; neutral amino acid transport system ATP-binding protein D NK55_00205 urtA; ABC-type high affinity urea uptake system substrate-binding component UrtA K11959 urtA; urea transport system substrate-binding protein D NK55_00200 urtB; ABC-type high affinity urea uptake system permease component UrtB K11960 urtB; urea transport system permease protein D NK55_00195 urtC; ABC-type high affinity urea uptake system permease component UrtC K11961 urtC; urea transport system permease protein D NK55_00190 urtD; ABC-type high affinity urea uptake system ATPase component UrtD K11962 urtD; urea transport system ATP-binding protein D NK55_00185 urtE; ABC-type high affinity urea uptake system ATPase component UrtE K11963 urtE; urea transport system ATP-binding protein D NK55_10605 mntC; ABC-type Zn/Mn uptake system substrate-binding component MntC K11601 mntC; manganese transport system substrate-binding protein D NK55_11540 mtrB; ABC-type Zn/Mn uptake system permease component MntB K11602 mntB; manganese transport system permease protein D NK55_10595 mntA; ABC-type Zn/Mn uptake system ATPase component MntA K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D NK55_08315 zntA; ABC-type zinc uptake system substrate-binding component ZntA K09815 znuA; zinc transport system substrate-binding protein D NK55_08670 zntB; ABC-type zinc uptake system permease component ZntB K09816 znuB; zinc transport system permease protein D NK55_08325 zntC; ABC-type zinc uptake system ATPase component ZntC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NK55_02535 nikM; ECF-type nickel uptake system substrate-binding component NikM K02007 cbiM; cobalt/nickel transport system permease protein D NK55_00785 cbiM; ECF-type cobalt transport system substrate-binding component CbiM K02007 cbiM; cobalt/nickel transport system permease protein D NK55_00795 cbiQ; ECF-type cobalt transport system permease component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D NK55_06890 nikQ; ECF-type nickel uptake system permease component of energizing module NikQ K02008 cbiQ; cobalt/nickel transport system permease protein D NK55_00800 cbiO; ECF-type cobalt transport system ATPase component CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NK55_03265 nikO; ECF-type nickel uptake system ATPase component NikO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NK55_02540 nikL; ECF-type nickel uptake system accessory component NikL K16915 cbiL; nickel transport protein D NK55_11075 bioY; ECF-type transport system substrate-specific component BioY K03523 bioY; biotin transport system substrate-specific component D NK55_00635 ECF-type uptake system permease component K16785 ecfT; energy-coupling factor transport system permease protein D NK55_11885 ABC-type transport system ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NK55_00695 sfuC; ABC-type iron(III)-transport system ATPase component SfuC K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NK55_04490 lptG; ABC-type lipopolysaccharide export system permease component LptG K11720 lptG; lipopolysaccharide export system permease protein D NK55_09435 lptF; ABC-type lipopolysaccharide export system permease component LptF K11720 lptG; lipopolysaccharide export system permease protein D NK55_04495 lptB; ABC-type lipopolysaccharide export system ATPase component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NK55_07100 ftsE-2; ABC-type septal ring translocating system ATPase component FtsE K09812 ftsE; cell division transport system ATP-binding protein D NK55_01420 ABC-type transport system permease and ATPase component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D NK55_11770 ABC-type transport system ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D NK55_04885 ABC-type cyclic peptide export system ATPase component K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D NK55_00930 ABC-type transport system ATPase component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:thn03070] D NK55_01020 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NK55_00590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NK55_01660 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NK55_09710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NK55_11985 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NK55_05930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NK55_11210 ftsY; signal recognition particle docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NK55_06560 ffh; signal recognition particle subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NK55_02375 mttA; twin-arginine protein translocation system component MttA K03116 tatA; sec-independent protein translocase protein TatA D NK55_11350 tatC; twin-arginine protein translocation system component TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:thn02020] D NK55_11190 sphS; two component signal transduction system controlling phosphate regulon histidine kinase SphS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NK55_11930 sphR; inorganic phosphate-responsive two component signal transduction system response regulator of phosphate metabolism SphR K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NK55_00025 ABC-type transport system substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein D NK55_05950 ABC-type transport system substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein D NK55_07475 pstS; ABC-type phosphate uptake system substrate-binding component PstS K02040 pstS; phosphate transport system substrate-binding protein D NK55_09475 heat shock peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D NK55_06135 ctaA1; heme A synthase cytochrome oxidase biogenesis protein CtaA1 K02259 COX15; heme a synthase [EC:1.17.99.9] D NK55_00005 dnaA; chromosome replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein D NK55_08845 manS; Mn-responsive two component signal transduction system histidine kinase ManS K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3] D NK55_08505 manR; Mn-responsive two component signal transduction system response regulator ManR K11521 manR; two-component system, OmpR family, manganese sensing response regulator D NK55_10605 mntC; ABC-type Zn/Mn uptake system substrate-binding component MntC K11601 mntC; manganese transport system substrate-binding protein D NK55_10595 mntA; ABC-type Zn/Mn uptake system ATPase component MntA K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D NK55_11540 mtrB; ABC-type Zn/Mn uptake system permease component MntB K11602 mntB; manganese transport system permease protein D NK55_07010 nblS; low temperature/osmotic stress-responsive two component signal transduction system histidine kinase with PAS domain NblS K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3] D NK55_09065 two component signal transduction system response regulator OmpR family K11332 nblR; two-component system, OmpR family, response regulator NblR D NK55_09345 sasA; two component signal transduction system histidine kinase controlling circadian rhythm SasA K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3] D NK55_02050 rpaA; osmotic stress-responsive two component signal transduction system response regulator of energy transfer from phycobilisomes to photosystems RpaA K10697 rpaA; two-component system, OmpR family, response regulator RpaA D NK55_08775 rpaB; two component signal transduction system response regulator of photosystem I RpaB K11329 rpaB; two-component system, OmpR family, response regulator RpaB D NK55_11230 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D NK55_02655 maeB; decarboxylating NADP-dependent malic enzyme MaeB K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D NK55_11940 glnB; nitrogen regulatory protein P-II GlnB K04751 glnB; nitrogen regulatory protein P-II 1 D NK55_04785 glnA; glutamine synthetase type I GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NK55_00135 pilA-2; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_01305 pilA-3; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_00110 pilA-1; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_10225 cheR; chemotaxis signal transuction system protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NK55_10215 chemotaxis signal transuction system adapter protein CheW family K03408 cheW; purine-binding chemotaxis protein CheW D NK55_00325 pilI-1; pilin-protein PilI K03408 cheW; purine-binding chemotaxis protein CheW D NK55_10205 cheA-2; chemotaxis signal transduction system histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NK55_10195 cheB; chemotaxis signal transuction system response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NK55_00155 chemotaxis signal transduction system methyl-accepting receptor K02660 pilJ; twitching motility protein PilJ D NK55_00320 pilJ; pilin-mediated motility/competence modulating chemotaxis signal transduction system methyl-accepting protein K02660 pilJ; twitching motility protein PilJ D NK55_00160 cheW; chemotaxis adaptor protein CheW K02659 pilI; twitching motility protein PilI D NK55_00170 patA; chemotaxis signal transduction system response regulator PatA K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00335 pilG; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00805 two component signal transduction system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00330 pilH; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00165 cheY-1; chemotaxis signal transduction system response regulator CheY K02658 pilH; twitching motility two-component system response regulator PilH D NK55_11825 pixJ; blue light-responsive cyanobacteriochrome PixJ K11525 pixJ; methyl-accepting chemotaxis protein PixJ D NK55_11830 pixI1; blue light phototaxis adaptor protein PixI K11524 pixI; positive phototaxis protein PixI D NK55_11820 pixL; blue light phototaxis signal transduction system hybrid histidine kinase / response regulator PixL K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL D NK55_11835 pixH; blue light phototaxis signal transduction system response regulator PixH K11523 pixH; two-component system, chemotaxis family, response regulator PixH D NK55_07335 crp; cyclic 3',5'-AMP-responsive transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NK55_08645 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NK55_11980 glsA; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D NK55_11065 cikA; class II cyanobacteriochrome controlling circadium rythym CikA K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D NK55_04715 cydA; cytochrome d ubiquinol oxidase subunit I CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D NK55_04720 cydB; cytochrome d ubiquinol oxidase subunit II CydB K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D NK55_05500 polysaccharide secretin Wza family K01991 wza; polysaccharide biosynthesis/export protein D NK55_05720 low molecular weight phosphotyrosine protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D NK55_08205 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D NK55_07725 histine phosphotransfer domain protein K20976 hptB; histidine phosphotransfer protein HptB C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:thn02024] D NK55_08075 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NK55_04995 trpE; anthranilate synthase alpha subunit TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NK55_02810 trpG; anthranilate synthase amidotransferase subunit TrpG K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NK55_04485 aroG; 3-deoxy-D-arabinoheptulosonate 7-phosphate (DAHP) synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NK55_10085 potD; ABC-type spermidine/putrescine uptake system substrate-binding component PotD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D NK55_10965 ABC-type amino acid transport system substrate-binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D NK55_05030 livH; ABC-type branched-chain amino acid uptake system permease component LivH K01997 livH; branched-chain amino acid transport system permease protein D NK55_11740 livM; branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D NK55_07235 livG; ABC-type branched-chain amino acid uptake system ATPase component LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D NK55_06715 livF; ABC-type branched-chain amino acid transport system ATPase component LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D NK55_03250 aas; long-chain-fatty-acid:[acyl-carrier protein] ligase (AMP-forming) Aas K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NK55_07335 crp; cyclic 3',5'-AMP-responsive transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NK55_08645 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NK55_07420 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NK55_02740 gsiB; ABC-type glutathione uptake system substrate-binding component GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NK55_10545 ABC-type nickel/dipeptide/oligopeptide uptake system substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NK55_04090 oppB-2; ABC-type oligopeptide uptake system permease component OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D NK55_03785 oppB-1; ABC-type oligopeptide uptake system permease component OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D NK55_01635 ABC-type oligopeptide transport system permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NK55_02920 oppC; ABC-type oligopeptide transport system permease component OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NK55_11200 gsiA; ABC-type glutathione uptake system ATPase component GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D NK55_07035 ABC-type transport system ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D NK55_11985 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NK55_00590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NK55_01660 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NK55_09710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NK55_05930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NK55_11210 ftsY; signal recognition particle docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NK55_06560 ffh; signal recognition particle subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:thn02030] D NK55_10205 cheA-2; chemotaxis signal transduction system histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NK55_10215 chemotaxis signal transuction system adapter protein CheW family K03408 cheW; purine-binding chemotaxis protein CheW D NK55_00325 pilI-1; pilin-protein PilI K03408 cheW; purine-binding chemotaxis protein CheW D NK55_10195 cheB; chemotaxis signal transuction system response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NK55_10225 cheR; chemotaxis signal transuction system protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] C 02040 Flagellar assembly D NK55_00065 sigA; group 1 RNA polymerase sigma-70 subunit SigA K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NK55_01405 eno; 2-phosphopyruvate hydratase (enolase) Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:thn04980] D NK55_11155 cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NK55_02020 metH; B12-dependent 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:thn01501] D NK55_10420 ampG; cell wall degradation product uptake proter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D NK55_07240 pbpA; penicillin binidng protein PbpA K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NK55_03695 mrdA; cell elongation-specific transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NK55_08375 ftsI; cell division-specific transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:thn01502] D NK55_11620 dldA; D-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NK55_07135 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D NK55_04400 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NK55_11435 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NK55_05715 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NK55_11230 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:thn01503] D NK55_03640 amiA; N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NK55_05525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NK55_09475 heat shock peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D NK55_05610 lpxA-1; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NK55_07745 lpxA-2; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:thn01000] C 01001 Protein kinases [BR:thn01001] D NK55_07050 spkA; serine/threonine protein kinase regulating cellular motility SpkA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D NK55_11745 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D NK55_03125 spkB; serine/threonine protein kinase regulator of Mn uptake SpkB K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D NK55_03800 wzc; bifunctional polysaccharide chain length determinant / protein tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D NK55_05495 chain length determinant protein-tyrosine kinase EpsG family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D NK55_11190 sphS; two component signal transduction system controlling phosphate regulon histidine kinase SphS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NK55_08845 manS; Mn-responsive two component signal transduction system histidine kinase ManS K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3] D NK55_07010 nblS; low temperature/osmotic stress-responsive two component signal transduction system histidine kinase with PAS domain NblS K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3] D NK55_09345 sasA; two component signal transduction system histidine kinase controlling circadian rhythm SasA K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3] D NK55_10205 cheA-2; chemotaxis signal transduction system histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NK55_11820 pixL; blue light phototaxis signal transduction system hybrid histidine kinase / response regulator PixL K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL D NK55_11065 cikA; class II cyanobacteriochrome controlling circadium rythym CikA K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D NK55_02300 two component signal transduction system hydrid histidine kinase / response regulator with GAF domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:thn01009] D NK55_02215 ahcY; S-adenosyl-L-homocysteine hydrolase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NK55_03755 htpG; heat shock protein 90 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NK55_07790 Mn++ or Mg++ dependent protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:thn01002] D NK55_02065 lspA; lipoprotein signal peptidase II LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] D NK55_02080 guaA; GMP synthase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NK55_05055 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NK55_02305 glsF; ferredoxin-dependent glutamate synthase GlsF K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1] D NK55_04000 glmS; glucosamine--fructose-6-phosphate aminotransferase isomerizing GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NK55_00870 asparagine synthetase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NK55_11790 pfpI; ATP-independent intracellular protease PfpI K05520 yhbO; deglycase [EC:3.5.1.124] D NK55_00990 intramembrane C-terminal tripeptide endopeptidase M79 family K07052 K07052; CAAX protease family protein D NK55_06120 intramembrane C-terminal tripeptide endopeptidase M79 family K07052 K07052; CAAX protease family protein D NK55_08585 intramembrane C-terminal tripeptide endopeptidase M79 family K07052 K07052; CAAX protease family protein D NK55_06670 ape2; alanine aminopeptidase Ape2 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NK55_03685 prlC; oligopeptidase A PrlC K01414 prlC; oligopeptidase A [EC:3.4.24.70] D NK55_11230 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D NK55_09250 Zn-dependent proteinase family M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D NK55_05370 pepA; cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NK55_06945 map; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NK55_07920 pepP; Xaa-Pro aminopeptidase PepP K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NK55_05835 ftsH1; ATP-dependent metalloprotease FtsH1 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NK55_09875 ftsH3; ATP-dependent metalloprotease FtsH3 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NK55_11645 ftsH-2; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NK55_09475 heat shock peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D NK55_02335 dacB-1; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NK55_01805 clpP3; ATP-dependent protease proteolytic subunit ClpP3 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NK55_08705 clpP2; ATP-dependent protease proteolytic subunit ClpP2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NK55_05455 clpR; ATP-dependent protease proteolytic subunit ClpR K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NK55_09160 uncharacterized protein, similar to the N-terminal domain of Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NK55_05785 lepB2; signal peptidase I LepB2 K03100 lepB; signal peptidase I [EC:3.4.21.89] D NK55_06855 lepB1; thylakoid signal peptidase I LepB1 K03100 lepB; signal peptidase I [EC:3.4.21.89] D NK55_11160 alpha/beta hydrolase fold protein K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-] D NK55_02480 ctpC; periplasmic carboxyl-terminal protease CtpC K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NK55_04685 ctpA; periplasmic carboxyl-terminal processing protease CtpA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NK55_08975 carboxyl-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NK55_05690 sppA2; signal peptide peptidase SppA2 K04773 sppA; protease IV [EC:3.4.21.-] D NK55_07500 cphB; cyanophycinase CphB K13282 cphB; cyanophycinase [EC:3.4.15.6] D NK55_09275 idcA; muramoyltetrapeptide carboxypeptidase IdcA K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D NK55_10030 ansA1; L-asparagine amidopeptidase AnsA1 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D NK55_07285 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NK55_01760 putative modulator of DNA gyrase PmbA family K03592 pmbA; PmbA protein D NK55_11650 tldD; modulator of DNA gyrase TldD K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:thn01003] D NK55_06785 cruG; 2'-O-glycosyltransferase CruG K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D NK55_00810 putative olichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D NK55_09535 hpnI; hopanoid biosynthesis associated glycosyl transferase protein HpnI K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80] D NK55_05945 glycosyl transferase family 2 K19003 mgdA; 1,2-diacylglycerol 3-beta-glucosyltransferase [EC:2.4.1.336] D NK55_10335 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NK55_02620 rffM-1; UDP-N-acetyl-D-mannosaminuronic acid transferase RffM K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D NK55_07105 rffM-2; UDP-N-acetyl-D-mannosaminuronic acid transferase RffM K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D NK55_07310 tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D NK55_03605 pgtA; UDP-glucose tetrahydrobiopterin glucosyltransferase PgtA K03867 BGLUT; UDP-glucose:tetrahydrobiopterin glucosyltransferase [EC:2.4.1.-] D NK55_01920 spsA; sucrose-phosphate synthase SpsA K00695 SUS; sucrose synthase [EC:2.4.1.13] C 01005 Lipopolysaccharide biosynthesis proteins [BR:thn01005] D NK55_05610 lpxA-1; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NK55_07745 lpxA-2; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase LpxA K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NK55_00455 lpxB-1; lipid A disaccharide synthase LpxB K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NK55_05600 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D NK55_09340 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NK55_05530 rfaE; bifunctional ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D NK55_04760 rafE; glycerol-3-phosphate cytidylyltransferase RafE K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D NK55_07330 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D NK55_07310 tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:thn01011] D NK55_10400 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NK55_03535 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NK55_03540 murC; UDP-N-acetylmuramate-L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NK55_09580 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NK55_04010 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NK55_11620 dldA; D-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NK55_07135 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D NK55_07140 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D NK55_09275 idcA; muramoyltetrapeptide carboxypeptidase IdcA K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D NK55_11435 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NK55_05715 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NK55_10175 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NK55_08850 murJ; peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NK55_03695 mrdA; cell elongation-specific transpeptidase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NK55_08375 ftsI; cell division-specific transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NK55_02335 dacB-1; D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NK55_11230 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D NK55_11235 slt; soluble lytic transglycosylase Slt K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NK55_11425 mltA; membrane-bound lytic transglycosylase A MltA K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D NK55_00400 RlpA family extracytoplasmic protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NK55_09040 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29] D NK55_03640 amiA; N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NK55_05525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:thn01004] D NK55_09300 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NK55_10800 fabH; beta-ketoacyl-acyl carrier protein synthase III FabH K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NK55_01575 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II FabB K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NK55_06025 fabF; 3-oxoacyl-(acyl carrier protein) synthase II FabF K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NK55_04150 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NK55_05605 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NK55_05110 fabI; NADH-dependent enoyl-[acyl-carrier-protein] reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NK55_11010 acsA; acetyl-CoA synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NK55_03250 aas; long-chain-fatty-acid:[acyl-carrier protein] ligase (AMP-forming) Aas K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NK55_10795 plsX; glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NK55_01625 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NK55_09290 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:thn01006] D NK55_09395 crtE; geranylgeranyl diphosphate synthase type II CrtE K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NK55_05445 sdsA; solanesyl diphosphate synthase SdsA K05356 SPS; all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85] D NK55_05475 uppS; undecaprenyl pyrophosphate synthetase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NK55_01680 farnesyl-diphosphate farnesyltransferase K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] D NK55_04440 crtB; phytoene synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D NK55_01450 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NK55_06845 plqA; 4-hydroxybenzoate solanesyltransferase PlqA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NK55_06130 ctaB; heme O synthase protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D NK55_04330 chlG; chlorophyll a synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] C 01007 Amino acid related enzymes [BR:thn01007] D NK55_08690 gltX; non-discriminating glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NK55_09255 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NK55_05810 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NK55_10700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NK55_10280 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NK55_08950 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NK55_04155 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NK55_08500 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NK55_00975 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NK55_02955 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NK55_09225 asnC; asparaginyl-tRNA synthetase AsnC K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NK55_06155 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NK55_01985 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NK55_07605 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NK55_04395 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NK55_10390 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NK55_07645 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NK55_08530 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NK55_01275 pheS; phenylalanyl-tRNA synthetase alpha subunit PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NK55_01390 pheT; phenylalanyl-tRNA synthetase beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NK55_08815 aspC; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NK55_05355 avtA; valine--pyruvate transaminase AvtA K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D NK55_08525 dapL-2; LL-diaminopimelate aminotransferase DapL K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NK55_08255 dapL-1; LL-diaminopimelate aminotransferase DapL K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D NK55_00645 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NK55_03100 bioF; 8-amino-7-oxononanoate synthase BioF K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NK55_06865 beta-alanine--pyruvate transaminase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D NK55_03115 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NK55_06370 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NK55_08555 hemL; glutamate-1-semialdehyde aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NK55_02760 ilvE; branched-chain amino acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NK55_08215 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:thn00194] D NK55_02840 psbA-1; photosystem II protein D1 PsbA K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9] D NK55_05895 psbA-2; photosystem II protein D1 PsbA K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9] D NK55_05900 psbA-3; photosystem II protein D1 PsbA K02703 psbA; photosystem II P680 reaction center D1 protein [EC:1.10.3.9] D NK55_04560 psbD-1; photosystem II reaction center D2 protein PsbD K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9] D NK55_07110 psbD-2; photosystem II reaction center D2 protein PsbD K02706 psbD; photosystem II P680 reaction center D2 protein [EC:1.10.3.9] D NK55_04555 psbC; photosystem II 44 kDa subunit reaction center protein PsbC K02705 psbC; photosystem II CP43 chlorophyll apoprotein D NK55_04280 psbB; photosystem II core light harvesting protein PsbB K02704 psbB; photosystem II CP47 chlorophyll apoprotein D NK55_04340 psbE; cytochrome b559 alpha subunit PsbE K02707 psbE; photosystem II cytochrome b559 subunit alpha D NK55_04345 psbF; cytochrome b559 beta subunit PsbF K02708 psbF; photosystem II cytochrome b559 subunit beta D NK55_04350 psbL; photosystem II reaction center protein PsbL K02713 psbL; photosystem II PsbL protein D NK55_04360 psbJ; photosystem II reaction center protein PsbJ K02711 psbJ; photosystem II PsbJ protein D NK55_02380 psbH; photosystem II reaction center phosphoprotein PsbH K02709 psbH; photosystem II PsbH protein D NK55_01790 psbI; photosystem II reaction center I protein PsbI K02710 psbI; photosystem II PsbI protein D NK55_01150 psbK; photosystem II reaction center protein PsbK K02712 psbK; photosystem II PsbK protein D NK55_08265 psbM; photosystem II assembly protein PsbM K02714 psbM; photosystem II PsbM protein D NK55_04285 psbT; photosystem II reaction center protein PsbT K02718 psbT; photosystem II PsbT protein D NK55_06535 psbZ; photosystem II reaction center protein PsbZ K02724 psbZ; photosystem II PsbZ protein D NK55_10755 psbY; photosystem II protein PsbY K02723 psbY; photosystem II PsbY protein D NK55_09175 psb27; photosystem II reaction center protein Psb27 K08902 psb27; photosystem II Psb27 protein D NK55_08620 psb28; photosystem II reaction center protein Psb28 K08903 psb28; photosystem II 13kDa protein D NK55_07040 psbO; photosystem II manganese-stabilizing protein PsbO K02716 psbO; photosystem II oxygen-evolving enhancer protein 1 D NK55_08380 psbP; photosystem II oxygen evolving complex protein PsbP K02717 psbP; photosystem II oxygen-evolving enhancer protein 2 D NK55_03335 psbV; photosystem II cytochrome c550 PsbV K02720 psbV; photosystem II cytochrome c550 D NK55_03340 psbV2; photosystem II cytochrome c550 PsbV2 K02720 psbV; photosystem II cytochrome c550 D NK55_02130 psbU; photosystem II 12 kDa extrinsic protein PsbU K02719 psbU; photosystem II PsbU protein D NK55_06755 psbX; photosystem II reaction center protein PsbX K02722 psbX; photosystem II PsbX protein D NK55_10145 psaA; photosystem I P700 chlorophyll a apoprotein A1 PsaA K02689 psaA; photosystem I P700 chlorophyll a apoprotein A1 [EC:1.97.1.12] D NK55_10150 psaB; photosystem I P700 chlorophyll a apoprotein A2 PsaB K02690 psaB; photosystem I P700 chlorophyll a apoprotein A2 [EC:1.97.1.12] D NK55_00120 psaC; photosystem I iron-sulfur center subunit VII PsaC K02691 psaC; photosystem I iron-sulfur center [EC:1.97.1.12] D NK55_05265 psaD; photosystem I subunit II PsaD K02692 psaD; photosystem I subunit II D NK55_04475 psaE; photosystem I reaction center subunit IV PsaE K02693 psaE; photosystem I subunit IV D NK55_02120 psaF; photosystem I subunit III precursor, plastocyanin (cyt c553) docking protein PsaF K02694 psaF; photosystem I subunit III D NK55_02150 psaI; photosystem I reaction center subunit VIII PsaI K02696 psaI; photosystem I subunit VIII D NK55_02115 psaJ; photosystem I reaction centre subunit IX PsaJ K02697 psaJ; photosystem I subunit IX D NK55_07965 psaK2; alternative photosystem I reaction center subunit X PsaK2 K02698 psaK; photosystem I subunit X D NK55_02155 psaL; photosystem I reaction center subunit XI PsaL K02699 psaL; photosystem I subunit XI D NK55_01045 psaM; photosystem I reaction center subunit XII PsaM K02700 psaM; photosystem I subunit XII D NK55_10565 psaX; photosystem I 4.8K protein PsaX K02702 psaX; photosystem I 4.8kDa protein D NK55_11385 petA; cytochrome b6-f complex apocytochrome f subunit PetA K02634 petA; apocytochrome f D NK55_10485 petB; cytochrome b6-f complex subunit cytochrome b6 PetB K02635 petB; cytochrome b6 D NK55_11380 petC; cytochrome b6-f complex iron-sulfur subunit PetC K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D NK55_10490 petD; cytochrome b6-f complex subunit IV PetD K02637 petD; cytochrome b6-f complex subunit 4 D NK55_10960 petG; cytochrome b6-f complex subunit V PetG K02640 petG; cytochrome b6-f complex subunit 5 D NK55_02525 petM; cytochrome b6-f complex subunit VII PetM K02643 petM; cytochrome b6-f complex subunit 7 D NK55_10710 petN; cytochrome b6-f complex subunit VIII PetN K03689 petN; cytochrome b6-f complex subunit 8 D NK55_00100 petF; 2Fe-2S ferredoxin PetF K02639 petF; ferredoxin D NK55_03995 soluble [2Fe-2S] ferredoxin K02639 petF; ferredoxin D NK55_04915 2Fe-2S ferredoxin PetF-like protein K02639 petF; ferredoxin D NK55_08590 2Fe-2S ferredoxin PetF-like protein K02639 petF; ferredoxin D NK55_03860 petH; ferredoxin--NADP+ reductase PetH K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2] D NK55_03345 petJ1; cytochrome c6c (soluble cytochrome f) PetJ1 K08906 petJ; cytochrome c6 D NK55_11635 atpC; F1 ATP synthase complex epsilon subunit AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NK55_11630 atpD; F1 ATP synthase complex beta subunit AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NK55_03610 F1 ATP synthase complex gamma subunit AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NK55_07000 atpA; F1 ATP synthase complex alpha subunit AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NK55_06995 atpH; F1 ATP synthase complex delta subunit AtpH K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NK55_06985 atpG; F0 ATP synthase complex B' subunit AtpG K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NK55_06990 atpF; F0 ATP synthase complex B subunit AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NK55_06980 atpE; F0 ATP synthase complex subunit C AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NK55_06975 atpB; F0 ATP synthase complex subunit A AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NK55_06970 atpI; F0 ATP synthase complex locus membrane protein AtpI K02116 atpI; ATP synthase protein I D NK55_11370 apcA; allophycocyanin subunit alpha ApcA K02092 apcA; allophycocyanin alpha subunit D NK55_11365 apcB; allophycocyanin subunit beta ApcB K02093 apcB; allophycocyanin beta subunit D NK55_11360 apcC; phycobilisome small core linker polypeptide ApcC K02094 apcC; phycobilisome core linker protein D NK55_04390 apcD; allophycocyanin B alpha subunit ApcD K02095 apcD; allophycocyanin-B D NK55_08770 apcE; phycobilisome core-membrane linker phycobiliprotein ApcE K02096 apcE; phycobilisome core-membrane linker protein D NK55_08175 apcF; allophycocyanin beta chain ApcF K02097 apcF; phycobilisome core component D NK55_06485 cpcA; phycocyanin alpha subunit CpcA K02284 cpcA; phycocyanin alpha chain D NK55_06480 cpcB; phycocyanin beta subunit CpcB K02285 cpcB; phycocyanin beta chain D NK55_06490 cpcC; phycocyanin-associated rod linker protein CpcC K02286 cpcC; phycocyanin-associated rod linker protein D NK55_06495 cpcD; phycocyanin-associated rod-terminating linker protein CpcD K02287 cpcD; phycocyanin-associated, rod D NK55_06500 cpcE; phycocyanin alpha subunit phycocyanobilin lyase CpcE K02288 cpcE; phycocyanobilin lyase subunit alpha [EC:4.4.1.32] D NK55_06505 cpcF; phycocyanin alpha subunit phycocyanobilin lyase CpcF K02289 cpcF; phycocyanobilin lyase subunit beta [EC:4.4.1.32] D NK55_06510 cpcG-1; phycobilisome rod-core linker protein cpcG K02290 cpcG; phycobilisome rod-core linker protein D NK55_06515 cpcG-2; phycobilisome rod-core linker protein cpcG K02290 cpcG; phycobilisome rod-core linker protein D NK55_06520 cpcG-3; phycobilisome rod-core linker protein cpcG K02290 cpcG; phycobilisome rod-core linker protein B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:thn03000] D NK55_08190 ccmR; transcriptional regulator of carbon dixoide fixation CcmR K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D NK55_08610 sufR; iron-sulfur cluster redox status-responsive transcriptional repressor of iron-sulfur cluster biogenesis SufR K09012 sufR; DeoR family transcriptional regulator, suf operon transcriptional repressor D NK55_07255 GntR family transcriptional regulator controlling phycobilisome degradation K07978 plmA; GntR family transcriptional regulator D NK55_01070 zur; Zn2+-responsive transcriptional regulator of zinc homeostasis Zur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NK55_09265 fur; Fe2+-responsive transcriptional regulator of iron homeostasis Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NK55_09370 transcriptional regulator Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NK55_07335 crp; cyclic 3',5'-AMP-responsive transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NK55_08645 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NK55_04880 ntcA; 2-oxoglutarate-responsive transcriptional activator of nitrogen assimilation NtcA K21561 ntcA; CRP/FNR family transcriptional regulator, global nitrogen regulator D NK55_01190 iscR; transcriptional repressor of Fe-S cluster biogenesis system IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D NK55_08675 putative transcriptional regulator of cysteine synthase, Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor D NK55_07800 arsR; transcriptional regulator of arsenate resistance ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NK55_00140 smtB; Zn(II)-responsive transcriptional repressor of zinc resistance SmtB K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D NK55_06475 pex; circadian period extender Pex K26743 pex; PadR family transcriptional regulator, circadian period extender D NK55_01605 birA; bifunctional biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NK55_00225 sugar fermentation stimulation protein B K07729 K07729; putative transcriptional regulator D NK55_06905 putA; bifunctional proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NK55_04520 inrS; internal nickel-responsive sensor InrS K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D NK55_10325 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D NK55_08165 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NK55_05980 nrdR; deoxyribonucleotide-responsive transcriptional repressor of deoxyribonucleotide biosynthesis NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:thn03021] D NK55_09740 rpoA; DNA-directed RNA polymerase alpha subunit RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NK55_01485 rpoB; DNA-directed RNA polymerase beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NK55_01490 rpoC1; DNA-directed RNA polymerase gamma subunit RpoC1 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NK55_01495 rpoC2; DNA-directed RNA polymerase delta subunit RpoC2 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NK55_07880 rpoZ; DNA-directed RNA polymerase omega subunit RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NK55_00065 sigA; group 1 RNA polymerase sigma-70 subunit SigA K03086 rpoD; RNA polymerase primary sigma factor D NK55_00725 sigD; group 2 RNA polymerase sigma-70 subunit SigD K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D NK55_10730 sigB; group 2 RNA polymerase sigma-70 subunit SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D NK55_08660 sigE; group 2 RNA polymerase sigma-70 subunit SigE K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D NK55_10180 sigF; group 3 RNA polymerase sigma-70 subunit SigF K03090 sigB; RNA polymerase sigma-B factor D NK55_06385 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NK55_10435 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D NK55_00585 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NK55_07765 rsbU; serine phosphatase modulating sigma factor SibG RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D NK55_02915 two component signal transduction system response regulator with spoIIE domain K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D NK55_02890 rsbQ; hydrolase of unknown specificity RsbQ K19707 rsbQ; sigma-B regulation protein RsbQ D NK55_04480 rsbV; anti sigma b factor antagonist RsbV K04749 rsbV; anti-sigma B factor antagonist D NK55_11745 rsbW; anti-sigma B factor RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] C 03019 Messenger RNA biogenesis [BR:thn03019] D NK55_11970 rne; ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12] D NK55_03905 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-] D NK55_10505 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NK55_01405 eno; 2-phosphopyruvate hydratase (enolase) Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NK55_07610 pnpA; polynucleotide phosphorylase/polyadenylase PnpA K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NK55_07405 dnaK3; molecular chaperone DnaK3 K04043 dnaK; molecular chaperone DnaK D NK55_05305 dnaK2; molecular chaperone DnaK2 K04043 dnaK; molecular chaperone DnaK D NK55_10460 dnaK1; molecular chaperone DnaK1 K04043 dnaK; molecular chaperone DnaK D NK55_02510 groEL2; 60 kDa chaperonin protein GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_01105 groEL1; heat shock protein 60 family chaperone GroEL1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_08075 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NK55_00965 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 03041 Spliceosome C 03011 Ribosome [BR:thn03011] D NK55_08235 rpsA; 30S ribosomal protein S1 RpsA K02945 RP-S1; small subunit ribosomal protein S1 D NK55_05075 rpsB; 30S ribosomal protein S2 RpsB K02967 RP-S2; small subunit ribosomal protein S2 D NK55_09650 rpsC; 30S ribosomal protein S3 RpsC K02982 RP-S3; small subunit ribosomal protein S3 D NK55_09955 rpsD; 30S ribosomal protein S4 RpsD K02986 RP-S4; small subunit ribosomal protein S4 D NK55_09700 rpsE; 30S ribosomal protein S5 RpsE K02988 RP-S5; small subunit ribosomal protein S5 D NK55_03365 rpsF; 30S ribosomal protein S6 RpsF K02990 RP-S6; small subunit ribosomal protein S6 D NK55_05385 rpsG; 30S ribosomal protein S7 RpsG K02992 RP-S7; small subunit ribosomal protein S7 D NK55_09685 rpsH; 30S ribosomal protein S8 RpsH K02994 RP-S8; small subunit ribosomal protein S8 D NK55_09760 rpsI; 30S ribosomal protein S9 RpsI K02996 RP-S9; small subunit ribosomal protein S9 D NK55_05400 rpsJ; 30S ribosomal protein S10 RpsJ K02946 RP-S10; small subunit ribosomal protein S10 D NK55_09735 rpsK; 30S ribosomal protein S11 RpsK K02948 RP-S11; small subunit ribosomal protein S11 D NK55_09730 rpsM; 30S ribosomal protein S13 RpsM K02952 RP-S13; small subunit ribosomal protein S13 D NK55_05805 rpsN; 30S ribosomal protein S14 RpsN K02954 RP-S14; small subunit ribosomal protein S14 D NK55_03840 rpsO; 30S ribosomal protein S15 RpsO K02956 RP-S15; small subunit ribosomal protein S15 D NK55_09305 rpsP; 30S ribosomal protein S16 RpsP K02959 RP-S16; small subunit ribosomal protein S16 D NK55_09665 rpsQ; 30S ribosomal protein S17 RpsQ K02961 RP-S17; small subunit ribosomal protein S17 D NK55_08310 rpsR; 30S ribosomal protein S18 RpsR K02963 RP-S18; small subunit ribosomal protein S18 D NK55_09640 rpsS; 30S ribosomal protein S19 RpsS K02965 RP-S19; small subunit ribosomal protein S19 D NK55_03740 rpsT; 30S ribosomal protein S20 RpsT K02968 RP-S20; small subunit ribosomal protein S20 D NK55_09315 rpsU; 30S ribosomal protein S21 RpsU K02970 RP-S21; small subunit ribosomal protein S21 D NK55_00550 ycf65; 30S ribosomal component Ycf65 K19032 PSRP3; 30S ribosomal protein 3 D NK55_00575 rplA; 50S ribosomal protein L1 RplA K02863 RP-L1; large subunit ribosomal protein L1 D NK55_09635 rplB; 50S ribosomal protein L2 RplB K02886 RP-L2; large subunit ribosomal protein L2 D NK55_09620 rplC; 50S ribosomal protein L3 RplC K02906 RP-L3; large subunit ribosomal protein L3 D NK55_09680 rplE; 50S ribosomal protein L5 RplE K02931 RP-L5; large subunit ribosomal protein L5 D NK55_09690 rplF; 50S ribosomal protein L6 RplF K02933 RP-L6; large subunit ribosomal protein L6 D NK55_02110 rplI; 50S ribosomal protein L9 RplI K02939 RP-L9; large subunit ribosomal protein L9 D NK55_00570 rplJ; 50S ribosomal protein L10 RplJ K02864 RP-L10; large subunit ribosomal protein L10 D NK55_00580 rplK; 50S ribosomal protein L11 RplK K02867 RP-L11; large subunit ribosomal protein L11 D NK55_00565 rplL; 50S ribosomal protein L7/L12 RplL K02935 RP-L7; large subunit ribosomal protein L7/L12 D NK55_09755 rplM; 50S ribosomal protein L13 RplM K02871 RP-L13; large subunit ribosomal protein L13 D NK55_09670 rplN; 50S ribosomal protein L14 RplN K02874 RP-L14; large subunit ribosomal protein L14 D NK55_09705 rplO; 50S ribosomal protein L15 RplO K02876 RP-L15; large subunit ribosomal protein L15 D NK55_09655 rplP; 50S ribosomal protein L16 RplP K02878 RP-L16; large subunit ribosomal protein L16 D NK55_09745 rplQ; 50S ribosomal protein L17 RplQ K02879 RP-L17; large subunit ribosomal protein L17 D NK55_09695 rplR; 50S ribosomal protein L18 RplR K02881 RP-L18; large subunit ribosomal protein L18 D NK55_03240 rplS; 50S ribosomal protein L19 RplS K02884 RP-L19; large subunit ribosomal protein L19 D NK55_07445 rplT; 50S ribosomal protein L20 RplT K02887 RP-L20; large subunit ribosomal protein L20 D NK55_01200 rplU; 50S ribosomal protein L21 RplU K02888 RP-L21; large subunit ribosomal protein L21 D NK55_09645 rplV; 50S ribosomal protein L22 RplV K02890 RP-L22; large subunit ribosomal protein L22 D NK55_09630 rplW; 50S ribosomal protein L23 RplW K02892 RP-L23; large subunit ribosomal protein L23 D NK55_09675 rplX; 50S ribosomal protein L24 RplX K02895 RP-L24; large subunit ribosomal protein L24 D NK55_01205 rpmA; 50S ribosomal protein L27 RpmA K02899 RP-L27; large subunit ribosomal protein L27 D NK55_09165 rpmB; 50S ribosomal protein L28 RpmB K02902 RP-L28; large subunit ribosomal protein L28 D NK55_09660 rpmC; 50S ribosomal protein L29 RpmC K02904 RP-L29; large subunit ribosomal protein L29 D NK55_09765 rpmE; 50S ribosomal protein L31 RpmE K02909 RP-L31; large subunit ribosomal protein L31 D NK55_06245 rpmF; 50S ribosomal protein L32 RpmF K02911 RP-L32; large subunit ribosomal protein L32 D NK55_08305 rpmG; 50S ribosomal protein L33 RpmG K02913 RP-L33; large subunit ribosomal protein L33 D NK55_11995 rpmH; 50S ribosomal protein L34 RpmH K02914 RP-L34; large subunit ribosomal protein L34 D NK55_07450 rpmI; 50S ribosomal protein L35 RpmI K02916 RP-L35; large subunit ribosomal protein L35 D NK55_09725 rpmJ; 50S ribosomal protein L36 RpmJ K02919 RP-L36; large subunit ribosomal protein L36 D NK55_11655 rplY; 50S ribosomal protein L25 RplY K02897 RP-L25; large subunit ribosomal protein L25 D NK55_07810 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NK55_07830 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NK55_07815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:thn03009] D NK55_09500 era; GTP-binding protein Era K03595 era; GTPase D NK55_03300 GTPase with DUF697 domain K03595 era; GTPase D NK55_08835 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D NK55_06385 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NK55_10435 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D NK55_00585 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NK55_01410 rsuA; 16S rRNA pseudouridylate 516 synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D NK55_01400 rsmA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NK55_00985 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NK55_01885 rsmD; rRNA small subunit methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NK55_05165 rsmG; 16S rRNA (guanine527-N7)-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NK55_08365 rsmH; 16S rRNA (cytosine1402-N4)-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NK55_04205 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase RsmI K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NK55_02735 RNA binding methyltransferase FtsJ-like protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D NK55_01955 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NK55_02045 rlmN; ribosomal RNA large subunit methyltransferase N RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NK55_11275 rumA; 23S rRNA (uracil1939-C5)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NK55_04325 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NK55_01465 rluE; 23S rRNA pseudouridine2457 synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D NK55_07175 rimI; ribosomal-protein-alanine acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D NK55_01825 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D NK55_04460 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NK55_00435 prmA; 50S ribosomal protein L11 methyltransferase PrmA K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D NK55_11970 rne; ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12] D NK55_08955 yqgF; holliday junction resolvase-like protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NK55_06965 ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] D NK55_11500 engC; ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NK55_10970 engA; GTP-binding protein EngA K03977 engA; GTPase D NK55_04175 rbgA; 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A D NK55_07275 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NK55_11900 bifunctional GTP pyrophosphokinase/guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NK55_04570 rbfA; ribosome-binding factor A RbfA K02834 rbfA; ribosome-binding factor A D NK55_06390 DUF150 family protein clustered with NusA transcription elongation factor K09748 rimP; ribosome maturation factor RimP D NK55_03915 iojap-related protein K09710 ybeB; ribosome-associated protein D NK55_04800 ybeY; rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor D NK55_04790 ychF; GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase D NK55_09600 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:thn03016] D NK55_11145 rnz; ribonuclease Z RnZ K00784 rnz; ribonuclease Z [EC:3.1.26.11] D NK55_11605 tRNA nucleotidyltransferase A-adding K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D NK55_10090 pcnB; CC-adding tRNA nucleotidyltransferase PcnB K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D NK55_08690 gltX; non-discriminating glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NK55_10390 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NK55_08950 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NK55_08500 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NK55_10280 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NK55_10700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NK55_00975 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NK55_02955 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NK55_08530 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NK55_09225 asnC; asparaginyl-tRNA synthetase AsnC K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D NK55_07645 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NK55_04395 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NK55_05810 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NK55_04155 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NK55_06155 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NK55_01275 pheS; phenylalanyl-tRNA synthetase alpha subunit PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NK55_01390 pheT; phenylalanyl-tRNA synthetase beta subunit PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NK55_09255 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NK55_00210 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NK55_06600 trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NK55_09750 truA; tRNA pseudouridine38-40 synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NK55_04695 truB; tRNA pseudouridine 55 synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NK55_09790 iscS1; cysteine desulfurase IscS1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_11140 iscS2; cysteine desulfurase IscS2 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_07275 tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NK55_01450 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NK55_11390 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NK55_04820 cysQ; 3'-5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NK55_11205 3'-Phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NK55_11945 rph; ribonuclease PH Rph K00989 rph; ribonuclease PH [EC:2.7.7.56] D NK55_01435 rnb; ribonuclease II Rnb K01147 rnb; exoribonuclease II [EC:3.1.13.1] D NK55_01745 rnd; putative ribonuclease D Rnd K03684 rnd; ribonuclease D [EC:3.1.13.5] D NK55_01985 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NK55_07605 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NK55_01140 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NK55_11520 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NK55_03170 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NK55_07245 trmJ; tRNA (cytidine/uridine-2'-O-)methyltransferase TrmJ K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D NK55_07085 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D NK55_04660 trmD; tRNA (Guanine37-N1) -methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NK55_05615 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D NK55_06530 tRNA/rRNA methyltransferase TrmH family K03437 spoU; RNA methyltransferase, TrmH family D NK55_07875 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NK55_10910 sufA; putative redox sensory protein SufA K13628 iscA; iron-sulfur cluster assembly protein D NK55_06440 ygfZ; folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D NK55_08740 miaE; tRNA-(MS[2]IO[6]A)-hydroxylase MiaE K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D NK55_11180 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NK55_05300 queC; queuosine biosynthesis ATPase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NK55_01685 queD; 6-pyruvoyl tetrahydrobiopterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NK55_11050 queE; queuosine biosynthesis radical SAM protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NK55_00950 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NK55_09615 tgt; tRNA-guanine transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NK55_04630 tilS; tRNA(Ile) lysidine synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D NK55_09525 yeaZ; YgjD protease YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D NK55_08665 ygjD; essential endopeptidase YgiD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NK55_07080 yjeE; ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NK55_07610 pnpA; polynucleotide phosphorylase/polyadenylase PnpA K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:thn03012] D NK55_01820 infB; translation initiation factor IF-2 InfB K02519 infB; translation initiation factor IF-2 D NK55_04615 infC; translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3 D NK55_05065 tsf; elongation factor Tsf K02357 tsf; elongation factor Ts D NK55_05395 tufA; translation elongation factor Tu TufA K02358 tuf; elongation factor Tu D NK55_05390 fusA; translation elongation factor G FusA K02355 fusA; elongation factor G D NK55_08805 fus; elongation factor G Fus K02355 fusA; elongation factor G D NK55_09960 prfA; peptide chain release factor 1 PrfA K02835 prfA; peptide chain release factor 1 D NK55_09050 frr; ribosome recycling factor Frr K02838 frr; ribosome recycling factor D NK55_05860 prmC; SAM-dependent methyltransferase PrmC K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D NK55_02370 pth; peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NK55_09720 infA; translation initiation factor IF-1 InfA K02518 infA; translation initiation factor IF-1 D NK55_03285 efp; translation elongation factor P Efp K02356 efp; elongation factor P D NK55_07660 prfC; peptide chain release factor 3 PrfC K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:thn03110] D NK55_02395 clpB-1; ATP-dependent protease ATPase subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NK55_09080 clpB-2; ATP-dependent protease ATPase subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NK55_00510 clpC; ATP-dependent Clp protease ATPase subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D NK55_08710 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NK55_03755 htpG; heat shock protein 90 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NK55_07405 dnaK3; molecular chaperone DnaK3 K04043 dnaK; molecular chaperone DnaK D NK55_05305 dnaK2; molecular chaperone DnaK2 K04043 dnaK; molecular chaperone DnaK D NK55_10460 dnaK1; molecular chaperone DnaK1 K04043 dnaK; molecular chaperone DnaK D NK55_02510 groEL2; 60 kDa chaperonin protein GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_01105 groEL1; heat shock protein 60 family chaperone GroEL1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_10980 molecular chaperone DnaJ family K03686 dnaJ; molecular chaperone DnaJ D NK55_10455 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D NK55_00655 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein D NK55_07400 DnaJ-class molecular chaperone DnaJ family K05516 cbpA; curved DNA-binding protein D NK55_10540 hslO; Hsp33-like chaperonin HslO K04083 hslO; molecular chaperone Hsp33 D NK55_03175 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D NK55_10940 hspA; small heat shock protein HspA K13993 HSP20; HSP20 family protein D NK55_01100 groES; heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES D NK55_09475 heat shock peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D NK55_05835 ftsH1; ATP-dependent metalloprotease FtsH1 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NK55_09875 ftsH3; ATP-dependent metalloprotease FtsH3 K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NK55_11645 ftsH-2; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NK55_06975 atpB; F0 ATP synthase complex subunit A AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NK55_00460 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D NK55_09905 ppib; periplasmic peptidyl-prolyl cis-trans isomerase B cyclophilin type PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D NK55_08445 trxM; thioredoxin M TrxM K03671 TXN; thioredoxin D NK55_10560 trxA; m-type thioredoxin TrxA K03671 TXN; thioredoxin D NK55_11110 grxA; glutaredoxin 3 GrxA K03676 grxC; glutaredoxin 3 D NK55_10945 ycf64; monothiol glutaredoxin Grx4 family Ycf64 K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:thn04131] D NK55_00705 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NK55_03590 membrane protein UPF0016 family K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D NK55_05890 arsA-1; arsenite-activated anion-transporting ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D NK55_00610 ams1; alpha-mannosidase Ams1 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D NK55_09295 gap1; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase Gap1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NK55_02175 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_07970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_11590 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_03755 htpG; heat shock protein 90 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:thn04121] C 03051 Proteasome [BR:thn03051] D NK55_03755 htpG; heat shock protein 90 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:thn03032] D NK55_07930 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D NK55_00005 dnaA; chromosome replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein D NK55_02105 dnaB; primary replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NK55_03160 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D NK55_04095 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D NK55_08280 dnaEC; DNA polymerase III alpha subunit DnaEC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08345 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08860 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NK55_04510 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NK55_11600 holB; DNA polymerase III delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NK55_00865 dnaX; DNA-directed DNA polymerase III gamma and tau subunits DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NK55_01385 rnhB; ribonuclease HII RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NK55_10860 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NK55_04530 type II restriction-modification system GATC-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NK55_02310 gyrA-1; DNA gyrase subunit A GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NK55_04635 gyrA-2; DNA gyrase alpha subunit GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NK55_06075 topA; DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:thn03036] D NK55_07930 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D NK55_00655 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein D NK55_07400 DnaJ-class molecular chaperone DnaJ family K05516 cbpA; curved DNA-binding protein D NK55_00005 dnaA; chromosome replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein D NK55_09200 Dps family DNA-binding stress response protein K04047 dps; starvation-inducible DNA-binding protein D NK55_00050 dpsA; starvation induced DNA binding protein DpsA K04047 dps; starvation-inducible DNA-binding protein D NK55_08075 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NK55_06305 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D NK55_04920 scpA; segregation and condensation protein A ScpA K05896 scpA; segregation and condensation protein A D NK55_10810 scpB; segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B D NK55_07100 ftsE-2; ABC-type septal ring translocating system ATPase component FtsE K09812 ftsE; cell division transport system ATP-binding protein D NK55_08375 ftsI; cell division-specific transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NK55_09895 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D NK55_07030 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D NK55_11545 ftsZ; cell division tubulin protein FtsZ K03531 ftsZ; cell division protein FtsZ D NK55_03640 amiA; N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NK55_05525 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NK55_06770 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D NK55_06775 minD-1; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D NK55_06780 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D NK55_00780 ycf50; protein of unknown function DUF552 Ycf50 K09772 sepF; cell division inhibitor SepF D NK55_03885 cdv2; cell division protein SepF K09772 sepF; cell division inhibitor SepF D NK55_11250 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D NK55_11255 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D NK55_04810 rodA; rod shape determining protein RodA K05837 rodA; rod shape determining protein RodA D NK55_05165 rsmG; 16S rRNA (guanine527-N7)-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NK55_07085 trmFO; Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D NK55_02075 cytosolic Fe-S cluster assembling factor MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:thn03400] D NK55_06950 phrA; FAD-dependent deoxyribopyrimidine photolyase PhrA K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NK55_11750 putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NK55_07385 N-methylpurine-DNA glycosirase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D NK55_01780 mutY; A/G-specific adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NK55_04840 nth; endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NK55_02700 Nudix hydrolase family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NK55_08320 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NK55_06470 uracil-DNA glycosylase family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D NK55_04465 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NK55_05580 xth; exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NK55_04025 recJ-2; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NK55_10860 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NK55_01110 uvrA; excinuclease ABC subunit A UvrA K03701 uvrA; excinuclease ABC subunit A D NK55_08170 uvrB; excinuclease ABC subunit B UvrB K03702 uvrB; excinuclease ABC subunit B D NK55_05410 uvrC; excinuclease ABC subunit C UvrC K03703 uvrC; excinuclease ABC subunit C D NK55_00500 UvrD/REP helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NK55_09110 pcrA; ATP-dependent DNA helicase II PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NK55_01485 rpoB; DNA-directed RNA polymerase beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NK55_01490 rpoC1; DNA-directed RNA polymerase gamma subunit RpoC1 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NK55_01495 rpoC2; DNA-directed RNA polymerase delta subunit RpoC2 K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NK55_09740 rpoA; DNA-directed RNA polymerase alpha subunit RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NK55_07880 rpoZ; DNA-directed RNA polymerase omega subunit RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NK55_11345 mfd; transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NK55_09180 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D NK55_08280 dnaEC; DNA polymerase III alpha subunit DnaEC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08345 dnaE; DNA polymerase III alpha subunit DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NK55_08860 dnaN; DNA polymerase III beta subunit DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NK55_04510 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NK55_11600 holB; DNA polymerase III delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NK55_00865 dnaX; DNA-directed DNA polymerase III gamma and tau subunits DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NK55_04095 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D NK55_04530 type II restriction-modification system GATC-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NK55_08460 recA; recombinase A RecA K03553 recA; recombination protein RecA D NK55_11670 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NK55_07860 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NK55_02975 ruvC; Holliday junction resolvase RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NK55_06895 priA; primosome assembly protein N' PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NK55_07520 sbcC-1; nuclease SbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 D NK55_06585 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11 D NK55_09510 putative DNA repair protein RAD32 K03547 sbcD; DNA repair protein SbcD/Mre11 D NK55_01645 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NK55_00775 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF D NK55_10165 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NK55_07755 recO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NK55_07655 recR; recombination protein RecR K06187 recR; recombination protein RecR D NK55_06165 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D NK55_03965 cas1_cas4; type I CRISPR immunity system MYXAN subtype bifunctional metal-dependent deoxyribonuclease Cas1 / recB-like nuclease Cas4 K15342 cas1; CRISP-associated protein Cas1 D NK55_02310 gyrA-1; DNA gyrase subunit A GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NK55_04635 gyrA-2; DNA gyrase alpha subunit GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NK55_06075 topA; DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NK55_07930 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D NK55_10505 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NK55_04020 Rad3-related DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C 03029 Mitochondrial biogenesis [BR:thn03029] D NK55_01820 infB; translation initiation factor IF-2 InfB K02519 infB; translation initiation factor IF-2 D NK55_04615 infC; translation initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3 D NK55_05065 tsf; elongation factor Tsf K02357 tsf; elongation factor Ts D NK55_05395 tufA; translation elongation factor Tu TufA K02358 tuf; elongation factor Tu D NK55_05390 fusA; translation elongation factor G FusA K02355 fusA; elongation factor G D NK55_08805 fus; elongation factor G Fus K02355 fusA; elongation factor G D NK55_09500 era; GTP-binding protein Era K03595 era; GTPase D NK55_03300 GTPase with DUF697 domain K03595 era; GTPase D NK55_09255 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NK55_08500 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NK55_02955 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NK55_10700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NK55_00070 gatA; aspartyl-tRNA / glutamyl-tRNA amidotransferase subunit A GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NK55_02190 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NK55_04250 gatC; bifunctional aspartyl/glutamyl-tRNA amidotransferase subunit C GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NK55_04095 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein D NK55_05595 bamA; beta barrel protein translocation component BamA K07277 SAM50; outer membrane protein insertion porin family D NK55_07405 dnaK3; molecular chaperone DnaK3 K04043 dnaK; molecular chaperone DnaK D NK55_05305 dnaK2; molecular chaperone DnaK2 K04043 dnaK; molecular chaperone DnaK D NK55_10460 dnaK1; molecular chaperone DnaK1 K04043 dnaK; molecular chaperone DnaK D NK55_03175 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE D NK55_02510 groEL2; 60 kDa chaperonin protein GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_01105 groEL1; heat shock protein 60 family chaperone GroEL1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_01100 groES; heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES D NK55_10980 molecular chaperone DnaJ family K03686 dnaJ; molecular chaperone DnaJ D NK55_10455 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D NK55_04580 hydroxyacylglutathione hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D NK55_09790 iscS1; cysteine desulfurase IscS1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_11140 iscS2; cysteine desulfurase IscS2 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_10945 ycf64; monothiol glutaredoxin Grx4 family Ycf64 K07390 grxD; monothiol glutaredoxin D NK55_02075 cytosolic Fe-S cluster assembling factor MRP-like protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NK55_06130 ctaB; heme O synthase protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D NK55_06135 ctaA1; heme A synthase cytochrome oxidase biogenesis protein CtaA1 K02259 COX15; heme a synthase [EC:1.17.99.9] D NK55_11985 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NK55_03755 htpG; heat shock protein 90 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:thn02000] D NK55_01420 ABC-type transport system permease and ATPase component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D NK55_11770 ABC-type transport system ATPase and permease components K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D NK55_00970 ABC-type phospholipid-lipopolysaccharide transport system ATPase component K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D NK55_09985 ABC-type transport system ATPase component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NK55_11395 ABC-type phospholipid-lipopolysaccharide transport system ATPase and permease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NK55_11870 ABC-type multi-drug export system permease and ATPase component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NK55_04885 ABC-type cyclic peptide export system ATPase component K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein D NK55_00930 ABC-type transport system ATPase component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D NK55_04060 ABC-type transport system ATPase component K21397 K21397; ABC transport system ATP-binding/permease protein D NK55_03110 ABC-type transport system ATPase component K21397 K21397; ABC transport system ATP-binding/permease protein D NK55_03055 ABC-type transport system ATPase component K21397 K21397; ABC transport system ATP-binding/permease protein D NK55_00685 cysP; ABC-type sulfate/thiosulfate uptake system substrate-binding component CysP K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D NK55_00680 cysT; ABC-type sulfate/thiosulfate uptake system permease component CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D NK55_00670 cysW; ABC-type sulfate/thiosulfate uptake system permease component CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D NK55_05085 cysA; sulfate/thiosulfate ABC uptake system ATPase component CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D NK55_02225 nrtA; ABC-type nitrate/nitrite uptake system substrate-binding protein NrtA K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NK55_02230 nrtB; ABC-type nitrate/nitrite uptake system permease component NrtB K15577 nrtB; nitrate/nitrite transport system permease protein D NK55_02235 nrtC; ABC-type nitrate/nitrite uptake system ATPase component NrtC K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NK55_02240 nrtD; ABC-type nitrate/nitrite uptake system ATPase component NrtD K15579 nrtD; nitrate/nitrite transport system ATP-binding protein D NK55_06690 cmpA; high-affinity ABC-type bicarbonate uptake system substrate-binding component CmpA K11950 cmpA; bicarbonate transport system substrate-binding protein D NK55_06695 cmpB; high-affinity ABC-type bicarbonate uptake system permease component CmpB K11951 cmpB; bicarbonate transport system permease protein D NK55_06705 cmpD; high-affinity ABC-type bicarbonate uptake system ATPase component CmpD K11953 cmpD; bicarbonate transport system ATP-binding protein [EC:7.3.2.-] D NK55_11575 futA; ABC-type FeII uptake system substrate-binding component FutA K02012 afuA; iron(III) transport system substrate-binding protein D NK55_05205 futB; ABC-type FeII uptake system permease component FutB K02011 afuB; iron(III) transport system permease protein D NK55_04100 futC; ABC-type FeII uptake system ATPase component FutC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D NK55_10085 potD; ABC-type spermidine/putrescine uptake system substrate-binding component PotD K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D NK55_02180 ABC-type transport system permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D NK55_11035 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NK55_01225 ABC-type sugar transport system ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NK55_05440 ABC-type sugar uptake system ATPase component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NK55_08245 ABC-type sugar uptake system substrate-binding component K17244 chiE; putative chitobiose transport system substrate-binding protein D NK55_10310 ABC-type sugar transport system permease component K17245 chiF; putative chitobiose transport system permease protein D NK55_02355 ABC-type sugar transport system permease component K17246 chiG; putative chitobiose transport system permease protein D NK55_02140 protein of unknown function mce family Ycf22 K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NK55_02680 ycf63; membrane protein of unknown function DUF140 Ycf63 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NK55_00425 ABC-type transport system ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NK55_11960 ABC-type sugar uptake system substrate-binding component K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D NK55_04355 ABC-type sugar uptake system permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D NK55_01095 ABC-type sugar transport system permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein D NK55_00025 ABC-type transport system substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein D NK55_05950 ABC-type transport system substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein D NK55_07475 pstS; ABC-type phosphate uptake system substrate-binding component PstS K02040 pstS; phosphate transport system substrate-binding protein D NK55_07480 pstC; ABC-type phosphate uptake system permease component PstC K02037 pstC; phosphate transport system permease protein D NK55_07485 pstA; ABC-type phosphate uptake system permease component PstA K02038 pstA; phosphate transport system permease protein D NK55_07490 pstB; ABC-type phosphate uptake system ATPase component PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NK55_10965 ABC-type amino acid transport system substrate-binding component K01999 livK; branched-chain amino acid transport system substrate-binding protein D NK55_05030 livH; ABC-type branched-chain amino acid uptake system permease component LivH K01997 livH; branched-chain amino acid transport system permease protein D NK55_11740 livM; branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein D NK55_07235 livG; ABC-type branched-chain amino acid uptake system ATPase component LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D NK55_06715 livF; ABC-type branched-chain amino acid transport system ATPase component LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein D NK55_03150 natC; ABC-type netural amino acid transport system permease component NatC K11955 natC; neutral amino acid transport system permease protein D NK55_04765 natD; ABC-type netural amino acid transport system permease protein NatD K11956 natD; neutral amino acid transport system permease protein D NK55_03155 natA; ABC-type neutral amino acid transport system ATPase component NatA K11957 natA; neutral amino acid transport system ATP-binding protein D NK55_09490 natE; ABC-type neutral amino acid uptake sytem ATPase component NatE K11958 natE; neutral amino acid transport system ATP-binding protein D NK55_00205 urtA; ABC-type high affinity urea uptake system substrate-binding component UrtA K11959 urtA; urea transport system substrate-binding protein D NK55_00200 urtB; ABC-type high affinity urea uptake system permease component UrtB K11960 urtB; urea transport system permease protein D NK55_00195 urtC; ABC-type high affinity urea uptake system permease component UrtC K11961 urtC; urea transport system permease protein D NK55_00190 urtD; ABC-type high affinity urea uptake system ATPase component UrtD K11962 urtD; urea transport system ATP-binding protein D NK55_00185 urtE; ABC-type high affinity urea uptake system ATPase component UrtE K11963 urtE; urea transport system ATP-binding protein D NK55_02740 gsiB; ABC-type glutathione uptake system substrate-binding component GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NK55_10545 ABC-type nickel/dipeptide/oligopeptide uptake system substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NK55_04090 oppB-2; ABC-type oligopeptide uptake system permease component OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D NK55_03785 oppB-1; ABC-type oligopeptide uptake system permease component OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D NK55_01635 ABC-type oligopeptide transport system permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NK55_02920 oppC; ABC-type oligopeptide transport system permease component OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NK55_11200 gsiA; ABC-type glutathione uptake system ATPase component GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D NK55_07035 ABC-type transport system ATPase component K02031 ddpD; peptide/nickel transport system ATP-binding protein D NK55_06570 ABC-type metal transport system substrate-binding component BtuF family K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NK55_10605 mntC; ABC-type Zn/Mn uptake system substrate-binding component MntC K11601 mntC; manganese transport system substrate-binding protein D NK55_11540 mtrB; ABC-type Zn/Mn uptake system permease component MntB K11602 mntB; manganese transport system permease protein D NK55_10595 mntA; ABC-type Zn/Mn uptake system ATPase component MntA K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D NK55_08315 zntA; ABC-type zinc uptake system substrate-binding component ZntA K09815 znuA; zinc transport system substrate-binding protein D NK55_08670 zntB; ABC-type zinc uptake system permease component ZntB K09816 znuB; zinc transport system permease protein D NK55_08325 zntC; ABC-type zinc uptake system ATPase component ZntC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NK55_00795 cbiQ; ECF-type cobalt transport system permease component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D NK55_06890 nikQ; ECF-type nickel uptake system permease component of energizing module NikQ K02008 cbiQ; cobalt/nickel transport system permease protein D NK55_02535 nikM; ECF-type nickel uptake system substrate-binding component NikM K02007 cbiM; cobalt/nickel transport system permease protein D NK55_00785 cbiM; ECF-type cobalt transport system substrate-binding component CbiM K02007 cbiM; cobalt/nickel transport system permease protein D NK55_00800 cbiO; ECF-type cobalt transport system ATPase component CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NK55_03265 nikO; ECF-type nickel uptake system ATPase component NikO K02006 cbiO; cobalt/nickel transport system ATP-binding protein D NK55_02540 nikL; ECF-type nickel uptake system accessory component NikL K16915 cbiL; nickel transport protein D NK55_11075 bioY; ECF-type transport system substrate-specific component BioY K03523 bioY; biotin transport system substrate-specific component D NK55_00635 ECF-type uptake system permease component K16785 ecfT; energy-coupling factor transport system permease protein D NK55_11885 ABC-type transport system ATPase component K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NK55_00695 sfuC; ABC-type iron(III)-transport system ATPase component SfuC K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D NK55_04490 lptG; ABC-type lipopolysaccharide export system permease component LptG K11720 lptG; lipopolysaccharide export system permease protein D NK55_09435 lptF; ABC-type lipopolysaccharide export system permease component LptF K11720 lptG; lipopolysaccharide export system permease protein D NK55_04495 lptB; ABC-type lipopolysaccharide export system ATPase component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NK55_02825 gldF; ABC-type transport system for gliding motility permease component K25151 gldF; gliding motility-associated transport system permease protein D NK55_02820 ABC-type transport system for gliding motility ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein D NK55_02830 gldG; ABC-type transport system for gliding motility auxiliary component GldG K25153 gldG; gliding motility-associatede transport system auxiliary component D NK55_01475 devC; ABC-type glycolipid export system permease component DevC K25169 devC; heterocyst specific transport system permease protein D NK55_07100 ftsE-2; ABC-type septal ring translocating system ATPase component FtsE K09812 ftsE; cell division transport system ATP-binding protein D NK55_03140 ycf38; ABC type tranport system permease component YCF38 K01992 ABC-2.P; ABC-2 type transport system permease protein D NK55_06175 ABC-type transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NK55_09445 ABC-type export system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NK55_02365 rnd4b; RND type transport system permease component FtsX family Rnd4b K02004 ABC.CD.P; putative ABC transport system permease protein D NK55_01590 ABC-type transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein D NK55_01480 devA; ABC-type glycolipid export system ATPase component DevA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NK55_05880 ABC-type export system ATPase component DevA family K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NK55_05505 ftsE-1; ABC-type septal ring translocating system ATPase component FtsE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NK55_06190 sufC; iron-sulfur cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D NK55_01245 monovalent cation:proton antiporter-1 (CPA1) family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 D NK55_06400 multidrug efflux transporter MFS family K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D NK55_10420 ampG; cell wall degradation product uptake proter AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D NK55_02350 potassium channel protein K10716 kch; voltage-gated potassium channel D NK55_11495 potassium channel protein K10716 kch; voltage-gated potassium channel D NK55_09095 potassium voltage-gated channel K10716 kch; voltage-gated potassium channel D NK55_02360 trkA; potassium channel protein TrkA K10716 kch; voltage-gated potassium channel D NK55_01090 amt-1; ammonium/methylammonium permease Amt K03320 amt; ammonium transporter, Amt family D NK55_06615 amt-2; ammonium/methylammonium permease Amt K03320 amt; ammonium transporter, Amt family D NK55_01000 gst; glutathione S-transferase Gst K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NK55_07530 von Willebrand factor type A domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NK55_08240 mscL; large-conductive mechanosensitive channel MscL K03282 mscL; large conductance mechanosensitive channel D NK55_02945 small-conductance mechanosensitive channel K22044 ybiO; moderate conductance mechanosensitive channel D NK55_00475 exbB; biopolymer transport system component ExbB K03561 exbB; biopolymer transport protein ExbB D NK55_09495 exbD; outer membrane transport energizing sytem, membrane anchored component ExbD K03559 exbD; biopolymer transport protein ExbD D NK55_06835 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D NK55_01250 camphor resistance protein CrcB-like protein K06199 crcB; fluoride exporter D NK55_01255 camphor resistance protein CrcB-like protein K06199 crcB; fluoride exporter D NK55_07675 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D NK55_11480 transporter with N-terminal DUF21 domain, CBS, and CorC domains K03699 tlyC; magnesium and cobalt exporter, CNNM family D NK55_05500 polysaccharide secretin Wza family K01991 wza; polysaccharide biosynthesis/export protein D NK55_05595 bamA; beta barrel protein translocation component BamA K07277 SAM50; outer membrane protein insertion porin family D NK55_08720 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D NK55_07990 adhesin K21449 ata; trimeric autotransporter adhesin D NK55_04500 lptA; ABC-type lipopolysaccharide export porin system periplasmic chaperone LptA K09774 lptA; lipopolysaccharide export system protein LptA D NK55_05425 protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein D NK55_05560 chaA; calcium:proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter D NK55_01925 gltS; Na:glutamate symport carrier protein GltS K03312 gltS; glutamate:Na+ symporter, ESS family D NK55_11700 napA; Na+/H+ antiporter NapA K26735 KEA4_5_6; K+:H+ antiporter D NK55_09220 nhaS5; Na+/H+ antiporter NhaS5 K26730 napA; Na+:H+ antiporter D NK55_07075 nhaS3; high-affinity Na+(Li+):H+ thylakoid membrane antiporter NhaS3 K26730 napA; Na+:H+ antiporter D NK55_00540 ktrB; sodium-dependent potassium transport system, permease component KtrB K03498 trkH; trk/ktr system potassium uptake protein D NK55_06885 ktrA; sodium-dependent potassium transport system NAD-binding component KtrA K03499 trkA; trk/ktr system potassium uptake protein D NK55_08915 nucleobase:cation symporter-2 (NCS2) family K06901 pbuG; adenine/guanine/hypoxanthine permease D NK55_09935 chloride carrier/channel (CIC) family transporter K03281 clcA; chloride channel protein, CIC family D NK55_02835 chloride carrier/channel (CIC) family transporter K03281 clcA; chloride channel protein, CIC family D NK55_09075 chromate ion transporter (CHR) family K07240 chrA; chromate transporter D NK55_07390 bicA; medium affinity high-flux Na+/bicarbonate symporter BicA K03321 TC.SULP; sulfate permease, SulP family D NK55_05890 arsA-1; arsenite-activated anion-transporting ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D NK55_05735 mrpB; Na+/H+ antiporter complex subunit B MrpB K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D NK55_05765 mrpC; Na+/H+ antiporter complex subunit C MrpC K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D NK55_05760 mrpD; Na+/H+ antiporter complex subunit D MrpD K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D NK55_05755 mrpE; Na+/H+ antiporter complex subunit E MrpE K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D NK55_05750 mrpF; Na+/H+ antiporter complex subunit F MrpF K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D NK55_05745 mrpG; Na+/H+ antiporter complex subunit G MrpG K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D NK55_08850 murJ; peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NK55_02530 auxin efflux carrier (AEC) family protein K24180 mleP; malate permease and related proteins D NK55_11765 auxin efflux carrier (AEC) family protein K24180 mleP; malate permease and related proteins D NK55_08250 K+ uptake permease (KUP) family K03549 kup; KUP system potassium uptake protein D NK55_07030 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D NK55_03590 membrane protein UPF0016 family K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D NK55_09245 ccdA; c-type cytochrome biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D NK55_03800 wzc; bifunctional polysaccharide chain length determinant / protein tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D NK55_05495 chain length determinant protein-tyrosine kinase EpsG family K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D NK55_03825 feoA-1; ferrous iron uptake system accessory component FeoA K04758 feoA; ferrous iron transport protein A D NK55_02695 feoB-1; ferrous iron uptake system permease component FeoB K04759 feoB; ferrous iron transport protein B D NK55_05340 feoB-2; ferrous iron uptake system permease component FeoB K04759 feoB; ferrous iron transport protein B D NK55_07845 ictB; bicarbonate uptake permease IctB K18814 ictB; putative inorganic carbon (hco3(-)) transporter C 02044 Secretion system [BR:thn02044] D NK55_00135 pilA-2; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_01305 pilA-3; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_00110 pilA-1; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_09820 pilB; type IV fimbrial assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D NK55_09810 pilC; type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D NK55_00170 patA; chemotaxis signal transduction system response regulator PatA K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00335 pilG; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00805 two component signal transduction system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00330 pilH; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00165 cheY-1; chemotaxis signal transduction system response regulator CheY K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00160 cheW; chemotaxis adaptor protein CheW K02659 pilI; twitching motility protein PilI D NK55_00155 chemotaxis signal transduction system methyl-accepting receptor K02660 pilJ; twitching motility protein PilJ D NK55_00320 pilJ; pilin-mediated motility/competence modulating chemotaxis signal transduction system methyl-accepting protein K02660 pilJ; twitching motility protein PilJ D NK55_08895 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D NK55_08890 pilN; type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D NK55_08885 pilO; type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D NK55_08880 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D NK55_09815 pilT-1; pilin retraction protein PilT K02669 pilT; twitching motility protein PilT D NK55_04525 ylmG-1; integral membrane protein associated with nucleod distribution YlmG K02221 yggT; YggT family protein D NK55_11680 ylmG-2; integral membrane protein associated with nucleod distribution YlmG K02221 yggT; YggT family protein D NK55_05155 comEc; competence protein ComEc K02238 comEC; competence protein ComEC D NK55_05930 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NK55_00590 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NK55_01020 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NK55_01660 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NK55_09710 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NK55_06560 ffh; signal recognition particle subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NK55_11210 ftsY; signal recognition particle docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NK55_11985 yidC; inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NK55_02375 mttA; twin-arginine protein translocation system component MttA K03116 tatA; sec-independent protein translocase protein TatA D NK55_11350 tatC; twin-arginine protein translocation system component TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:thn02042] D NK55_11480 transporter with N-terminal DUF21 domain, CBS, and CorC domains K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:thn02022] D NK55_11190 sphS; two component signal transduction system controlling phosphate regulon histidine kinase SphS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NK55_11930 sphR; inorganic phosphate-responsive two component signal transduction system response regulator of phosphate metabolism SphR K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NK55_08845 manS; Mn-responsive two component signal transduction system histidine kinase ManS K11520 manS; two-component system, OmpR family, manganese sensing sensor histidine kinase [EC:2.7.13.3] D NK55_08505 manR; Mn-responsive two component signal transduction system response regulator ManR K11521 manR; two-component system, OmpR family, manganese sensing response regulator D NK55_07010 nblS; low temperature/osmotic stress-responsive two component signal transduction system histidine kinase with PAS domain NblS K07769 nblS; two-component system, OmpR family, sensor histidine kinase NblS [EC:2.7.13.3] D NK55_09065 two component signal transduction system response regulator OmpR family K11332 nblR; two-component system, OmpR family, response regulator NblR D NK55_09345 sasA; two component signal transduction system histidine kinase controlling circadian rhythm SasA K08479 sasA; two-component system, OmpR family, clock-associated histidine kinase SasA [EC:2.7.13.3] D NK55_02050 rpaA; osmotic stress-responsive two component signal transduction system response regulator of energy transfer from phycobilisomes to photosystems RpaA K10697 rpaA; two-component system, OmpR family, response regulator RpaA D NK55_08775 rpaB; two component signal transduction system response regulator of photosystem I RpaB K11329 rpaB; two-component system, OmpR family, response regulator RpaB D NK55_03105 nrrA; two component signal transduction system controlling glycogen catabolism response regulator NrrA K02483 K02483; two-component system, OmpR family, response regulator D NK55_10205 cheA-2; chemotaxis signal transduction system histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NK55_10195 cheB; chemotaxis signal transuction system response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NK55_00170 patA; chemotaxis signal transduction system response regulator PatA K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00335 pilG; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00805 two component signal transduction system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00330 pilH; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00165 cheY-1; chemotaxis signal transduction system response regulator CheY K02658 pilH; twitching motility two-component system response regulator PilH D NK55_11820 pixL; blue light phototaxis signal transduction system hybrid histidine kinase / response regulator PixL K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL D NK55_11835 pixH; blue light phototaxis signal transduction system response regulator PixH K11523 pixH; two-component system, chemotaxis family, response regulator PixH D NK55_11065 cikA; class II cyanobacteriochrome controlling circadium rythym CikA K11356 cikA; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D NK55_07725 histine phosphotransfer domain protein K20976 hptB; histidine phosphotransfer protein HptB D NK55_02300 two component signal transduction system hydrid histidine kinase / response regulator with GAF domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:thn02035] D NK55_10205 cheA-2; chemotaxis signal transduction system histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NK55_10215 chemotaxis signal transuction system adapter protein CheW family K03408 cheW; purine-binding chemotaxis protein CheW D NK55_00325 pilI-1; pilin-protein PilI K03408 cheW; purine-binding chemotaxis protein CheW D NK55_10225 cheR; chemotaxis signal transuction system protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NK55_10195 cheB; chemotaxis signal transuction system response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NK55_00170 patA; chemotaxis signal transduction system response regulator PatA K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00335 pilG; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NK55_00805 two component signal transduction system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00330 pilH; pilin-mediated motility/competence modulating chemotaxis signal transduction system response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00165 cheY-1; chemotaxis signal transduction system response regulator CheY K02658 pilH; twitching motility two-component system response regulator PilH D NK55_00160 cheW; chemotaxis adaptor protein CheW K02659 pilI; twitching motility protein PilI D NK55_00155 chemotaxis signal transduction system methyl-accepting receptor K02660 pilJ; twitching motility protein PilJ D NK55_00320 pilJ; pilin-mediated motility/competence modulating chemotaxis signal transduction system methyl-accepting protein K02660 pilJ; twitching motility protein PilJ D NK55_09815 pilT-1; pilin retraction protein PilT K02669 pilT; twitching motility protein PilT D NK55_11835 pixH; blue light phototaxis signal transduction system response regulator PixH K11523 pixH; two-component system, chemotaxis family, response regulator PixH D NK55_11830 pixI1; blue light phototaxis adaptor protein PixI K11524 pixI; positive phototaxis protein PixI D NK55_11825 pixJ; blue light-responsive cyanobacteriochrome PixJ K11525 pixJ; methyl-accepting chemotaxis protein PixJ D NK55_11820 pixL; blue light phototaxis signal transduction system hybrid histidine kinase / response regulator PixL K11526 pixL; two-component system, chemotaxis family, sensor histidine kinase and response regulator PixL D NK55_00135 pilA-2; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_01305 pilA-3; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_00110 pilA-1; type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA D NK55_09820 pilB; type IV fimbrial assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D NK55_09810 pilC; type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D NK55_08880 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D NK55_08885 pilO; type IV pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D NK55_08890 pilN; type IV pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D NK55_08895 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins [BR:thn03037] D NK55_01245 monovalent cation:proton antiporter-1 (CPA1) family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2 C 04812 Cytoskeleton proteins [BR:thn04812] D NK55_11250 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D NK55_11545 ftsZ; cell division tubulin protein FtsZ K03531 ftsZ; cell division protein FtsZ D NK55_06770 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D NK55_06775 minD-1; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D NK55_06780 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor C 04147 Exosome [BR:thn04147] D NK55_03755 htpG; heat shock protein 90 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NK55_01405 eno; 2-phosphopyruvate hydratase (enolase) Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NK55_09295 gap1; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase Gap1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NK55_07935 pgk; phosphoglycerate kinase PgK K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NK55_02175 pykF; pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_07970 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_11590 pyruvate kinase family protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D NK55_02510 groEL2; 60 kDa chaperonin protein GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_01105 groEL1; heat shock protein 60 family chaperone GroEL1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NK55_07405 dnaK3; molecular chaperone DnaK3 K04043 dnaK; molecular chaperone DnaK D NK55_05305 dnaK2; molecular chaperone DnaK2 K04043 dnaK; molecular chaperone DnaK D NK55_10460 dnaK1; molecular chaperone DnaK1 K04043 dnaK; molecular chaperone DnaK D NK55_10095 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NK55_07590 guaB; inosine-5'-monophosphate dehydrogenase catalytic subunit GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NK55_05395 tufA; translation elongation factor Tu TufA K02358 tuf; elongation factor Tu D NK55_00210 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NK55_03250 aas; long-chain-fatty-acid:[acyl-carrier protein] ligase (AMP-forming) Aas K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D NK55_02215 ahcY; S-adenosyl-L-homocysteine hydrolase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NK55_09715 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D NK55_08910 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NK55_00240 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NK55_10075 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NK55_11715 fbp; fructose-1,6-bisphosphatase Fbp K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NK55_11865 glgB; alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NK55_04785 glnA; glutamine synthetase type I GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NK55_06930 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NK55_05800 phhB; pterin-4a-carbinolamine dehydratase PhhB K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NK55_00440 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NK55_04370 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NK55_10915 lpdA; dihydrolipoamide dehydrogenase IpdA K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NK55_11710 zwf; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NK55_11410 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:thn02048] D NK55_03965 cas1_cas4; type I CRISPR immunity system MYXAN subtype bifunctional metal-dependent deoxyribonuclease Cas1 / recB-like nuclease Cas4 K15342 cas1; CRISP-associated protein Cas1 D NK55_03960 cas2; type I CRISPR immunity system endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D NK55_03950 cas3; type I CRISPR immunity system helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D NK55_03940 cas7; type I CRISPR-CAS system crRNA and target binding complex cascade protein Cas7 K19075 cst2; CRISPR-associated protein Cst2 D NK55_03935 cas5; type I CRISPR-CAS system crRNA and target binding complex cascade protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t D NK55_02100 mtelBI; type I restriction-modification system DNA-methyltransferase subunit M.TelBI K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D NK55_04530 type II restriction-modification system GATC-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NK55_10105 bifunctional type II restriction enzyme / methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D NK55_06060 type II restriction-modification system RGATCY-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D NK55_06090 type III restriction-modification system subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D NK55_06110 type III N6-adenine DNA methyltransferase subunit M K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D NK55_11330 type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D NK55_11320 Mrr restriction system protein K07448 mrr; restriction system protein D NK55_11545 ftsZ; cell division tubulin protein FtsZ K03531 ftsZ; cell division protein FtsZ D NK55_11250 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D NK55_08690 gltX; non-discriminating glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NK55_09790 iscS1; cysteine desulfurase IscS1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NK55_11140 iscS2; cysteine desulfurase IscS2 K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:thn04090] C 01504 Antimicrobial resistance genes [BR:thn01504] D NK55_07240 pbpA; penicillin binidng protein PbpA K17836 penP; beta-lactamase class A [EC:3.5.2.6] D NK55_11230 dacC; D-alanyl-D-alanine carboxypeptidase DacC K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:thn00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:thn03100] D NK55_07820 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NK55_08385 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NK55_04320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NK55_03310 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_03570 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_09060 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_06720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NK55_04405 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NK55_05870 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NK55_00365 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NK55_05090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NK55_08810 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NK55_09870 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NK55_05415 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NK55_00955 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NK55_02745 tRNA-His K14226 tRNA-His; tRNA His D NK55_07825 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NK55_10265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_01720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_09155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_03580 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NK55_05100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NK55_00305 tRNA-Met K14230 tRNA-Met; tRNA Met D NK55_08515 tRNA-Met K14230 tRNA-Met; tRNA Met D NK55_09785 tRNA-OTHER K14230 tRNA-Met; tRNA Met D NK55_06575 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NK55_02415 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NK55_00530 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NK55_01890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NK55_01165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_01520 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_03795 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_08155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NK55_00840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NK55_06290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NK55_11665 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NK55_03235 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NK55_08005 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NK55_09020 tRNA-Val K14237 tRNA-Val; tRNA Val D NK55_00285 tRNA-Val K14237 tRNA-Val; tRNA Val D NK55_01705 tRNA-Val K14237 tRNA-Val; tRNA Val D NK55_07830 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NK55_07815 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NK55_07810 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NK55_02315 dihydroflavonol 4-reductase K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219] D NK55_07540 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D NK55_03190 long-chain fatty acyl-ACP reductase (aldehyde-forming) K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80] D NK55_06405 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D NK55_09480 bifunctional zinc-containing alcohol dehydrogenase / quinone oxidoreductase (NADPH:quinone reductase) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NK55_10995 msrA; methionine sulfoxide reductase A MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NK55_03875 msrB; methionine-R-sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NK55_09780 ftrC; ferredoxin-thioredoxin reductase beta subunit FtrC K17892 FTRC; ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2] D NK55_01220 ParB-like nuclease domain protein K12260 SRX1; sulfiredoxin [EC:1.8.98.2] D NK55_02710 prxQ-B1; cytoplasmic thioredoxin-dependent peroxiredoxin Q PrxQ-B1 K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NK55_03770 prxQ-B2; thioredoxin-dependent peroxiredoxin Q PrxQ-B2 K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NK55_03790 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NK55_07185 alkyl hydroperoxide reductase subunit C-like protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NK55_07900 thioredoxin-dependent peroxidase 1-Cys family K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NK55_09420 diox1; all-trans-8'-apo-beta-carotenal 15,15'-oxygenase Diox1 K00464 diox1; all-trans-8'-apo-beta-carotenal 15,15'-oxygenase [EC:1.13.11.75] D NK55_06205 ybiX; Fe(II)-dependent oxygenase YbiX K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D NK55_05235 desF; syn-2 delta 9 acyl-lipid fatty acid desaturase DesF K23036 desC2; sn-2 palmitoyl-lipid 9-desaturase [EC:1.14.19.27] D NK55_04900 desC2; delta-9 acyl-lipid desaturase DesC2 K23054 desC; sn-1 stearoyl-lipid 9-desaturase [EC:1.14.19.28] D NK55_11555 desC; delta-9 acyl-lipid desaturase DesC K23054 desC; sn-1 stearoyl-lipid 9-desaturase [EC:1.14.19.28] D NK55_05350 ferritin-like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2] D NK55_02625 cfa; cyclopropane-fatty-acyl-phospholipid synthase Cfa K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NK55_10370 hopanoid 2-methyltransferase K22705 hpnP; hopanoid C-2 methylase [EC:2.1.1.-] D NK55_04965 cutE; apolipoprotein N-acyltransferase CutE K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D NK55_02340 acetyltransferase GNAT family K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D NK55_10880 aat; leucyl/phenylalanyl-tRNA--protein transferase Aat K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D NK55_04775 glycosyl transferase family 4 K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D NK55_03660 deoxyhypusine synthase-like enzyme K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D NK55_10600 deoxyhypusine synthase-like protein K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D NK55_03745 circadian phase modifier CpmA-like protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D NK55_07435 lgt; prolipoprotein diacylglyceryl transferase Lgt K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NK55_08195 phytol kinase K18678 VTE5; phytol kinase [EC:2.7.1.182] D NK55_04545 yidU; protein of unknown function UPF0061 family K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D NK55_11510 carboxylesterase K03928 yvaK; carboxylesterase [EC:3.1.1.1] D NK55_08630 yqeG; HAD superfamily phosphatase YqeG K07015 yqeG; putative phosphatase [EC:3.1.3.-] D NK55_03430 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D NK55_03730 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NK55_06180 endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8] D NK55_09185 protein of unknown function DUF1768 K09935 ybiA; N-glycosidase YbiA [EC:3.2.2.-] D NK55_05015 def; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88] D NK55_01995 polysaccharide deacetylase caspase activity K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D NK55_11170 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D NK55_10135 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D NK55_04415 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NK55_08415 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NK55_07525 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D NK55_03185 long-chain fatty aldehyde decarbonylase K14331 K14331; fatty aldehyde decarbonylase [EC:4.1.99.5] D NK55_02195 yjeF; hydroxyethylthiazole kinase-related YjeF K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D NK55_04015 adenine nucleotide alpha hydrolase TIGR00268 family K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D NK55_08070 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D NK55_07505 cphA; cyanophycin synthetase CphA K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D NK55_01515 ndhS; NADH dehydrogenase subunit S NdhS K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-] D NK55_06265 ctaA; P-type copper uptake ATPase CtaA K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D NK55_03920 pacL; Ca2+-transporting P-type ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D NK55_09980 cation-transporting ATPase E1-E2 family K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] C 99981 Carbohydrate metabolism D NK55_05135 sfsA; sugar fermentation stimulation protein A SfsA K06206 sfsA; sugar fermentation stimulation protein A D NK55_04745 ccmK3-1; carboxysome major structural protein CcmK3 K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK D NK55_11290 ccmK1; carboxysome major structural protein CcmK1 K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK D NK55_11295 ccmK2; carboxysome major structural protein CcmK2 K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK D NK55_11355 ccmK3-2; carboxysome major structural protein CcmK3 K08696 ccmK; carbon dioxide concentrating mechanism protein CcmK D NK55_11285 ccmL; carboxysome minor structural protein CcmL K08697 ccmL; carbon dioxide concentrating mechanism protein CcmL D NK55_11280 ccmM; carboxysome structural protein CcmM K08698 ccmM; carbon dioxide concentrating mechanism protein CcmM D NK55_11270 ccmN; carboxysome structural protein CcmN K08699 ccmN; carbon dioxide concentrating mechanism protein CcmN C 99982 Energy metabolism D NK55_07360 4Fe-4S type iron-sulfur protein K05337 fer; ferredoxin D NK55_01695 sufE2; iron-sulfur cluster assembly scaffold protein SufE2 K04488 iscU; nitrogen fixation protein NifU and related proteins D NK55_04670 protein of unknown function DUF3539 K14518 pipX; PII interaction protein X C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NK55_07370 hypothetical protein K06203 cysZ; CysZ protein D NK55_08965 c-des; PLP-dependent L-cyst(e)ine lyase C-DES K11325 K11325; L-cysteine/cystine lyase D NK55_01975 ylmE; cell division protein YlmE K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism D NK55_04590 cobW; GTPase involved in cobalt insertion for B12 biosynthesis CobW K02234 cobW; cobalamin biosynthesis protein CobW C 99988 Secondary metabolism C 99999 Others D NK55_08200 phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase D NK55_04070 pka; protein lysine acetyltransferase Pka K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D NK55_08945 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D NK55_11300 hypothetical protein K07578 K07578; homologs of the eukaryotic argonaute protein C 99975 Protein processing D NK55_01730 clpS-2; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D NK55_00980 clpS-1; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D NK55_08700 tig; cell division trigger factor Tig K03545 tig; trigger factor D NK55_02295 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D NK55_02290 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein D NK55_09505 ureG; Ni2+ binding GTPase regulating urease expression/maturation UreG K03189 ureG; urease accessory protein D NK55_11690 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein D NK55_06315 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein D NK55_11955 bchD-2; Mg chelatase ATPase subunit ChlI K07391 comM; magnesium chelatase family protein D NK55_01240 anbU; proteosome protein AnbU K07395 K07395; putative proteasome-type protease D NK55_01300 ccsB; c-type cytochrome biogenesis protein CcsB K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D NK55_08080 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein YbaZ K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D NK55_09135 Zn-dependent adenine-specific DNA methylase K07445 K07445; putative DNA methylase D NK55_05185 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D NK55_05325 uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D NK55_02600 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein C 99979 Viral proteins C 99998 Others D NK55_00640 vipp1-1; ring forming protein essential for thylakoid formation Vipp1 K03969 pspA; phage shock protein A D NK55_05105 vipp1-2; ring forming protein essential for thylakoid formation Vipp1 K03969 pspA; phage shock protein A D NK55_02630 type I restriction-modification system restriction subunit HsdR family K07504 K07504; predicted type IV restriction endonuclease D NK55_10125 DNA-binding protein YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NK55_04235 glycoside-pentoside-hexuronide (GPH):cation symporter family K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D NK55_04625 rnd1b; RND-type export system permease component hydrophobe/amphiphile (HAE1) family Rnd1b K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D NK55_00390 inorganic phosphate transporter (PiT) family K03306 TC.PIT; inorganic phosphate transporter, PiT family D NK55_00175 bile acid:Na+ symporter (BASS) family K03453 TC.BASS; bile acid:Na+ symporter, BASS family D NK55_05740 mrpA; Na+/H+ antiporter complex subunit A MrpA K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B C 99978 Cell growth D NK55_11975 jag; RNA-binding protein Jag K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D NK55_08010 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein D NK55_09325 phoH; phosphate starvation-inducible ATPase PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D NK55_08565 kaiB; circadian clock oscillator protein KaiB K08481 kaiB; circadian clock protein KaiB D NK55_11755 KaiB domain protein K08481 kaiB; circadian clock protein KaiB D NK55_08570 kaiC; circadian clock oscillator protein KaiC K08482 kaiC; circadian clock protein KaiC D NK55_10470 yajQ; protein of unknown function DUF520 YajQ K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D NK55_01470 devB; ABC-type glycolipid export system membrane fusion component DevB K02005 ABC.CD.TX; HlyD family secretion protein D NK55_05360 rnd4a; RND type transport system MFP component Rnd4a K02005 ABC.CD.TX; HlyD family secretion protein D NK55_11595 rnd3a; RND-type export system MFP component Rnd3a K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D NK55_03145 phosphate transport system regulatory protein phoU-like protein K02039 phoU; phosphate transport system protein D NK55_01585 cutA; periplasmic divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D NK55_02325 hypothetical protein K07216 hr; hemerythrin D NK55_06660 hemerythrin-like metal-binding domain protein K07216 hr; hemerythrin D NK55_08520 O-antigen ligase domain-containing protein K07234 K07234; uncharacterized protein involved in response to NO D NK55_00130 smtA; metallothionein SmtA K21904 smtA; metallothionein B B 09194 Poorly characterized C 99996 General function prediction only D NK55_02990 yjjG; nucleotide phosphatase YjjG K07025 K07025; putative hydrolase of the HAD superfamily D NK55_08605 sufB; iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D NK55_06200 sufD; iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D NK55_00560 haloacid dehalogenase superfamily subfamily IA hydrolase K11777 K11777; HAD superfamily phosphatase D NK55_02385 psbN; photosystem II reaction center protein PsbN K02715 psbN; PsbN protein D NK55_03215 hypothetical protein K08972 K08972; putative membrane protein D NK55_11015 hypothetical protein K08983 K08983; putative membrane protein C 99997 Function unknown D NK55_10715 hypothetical protein K06867 K06867; uncharacterized protein D NK55_10885 hypothetical protein K06872 K06872; uncharacterized protein D NK55_06850 thylakoid lumen protein K06872 K06872; uncharacterized protein D NK55_06825 BioD-like N-terminal domain of phosphotransacetylase K06873 K06873; uncharacterized protein D NK55_00080 GTPase of unknown function DUF697 K06883 K06883; uncharacterized protein D NK55_02615 hypothetical protein K06883 K06883; uncharacterized protein D NK55_10255 protein of unknown function DUF255 K06888 K06888; uncharacterized protein D NK55_07150 putative membrane protein K06890 K06890; uncharacterized protein D NK55_01430 Fe-S cluster protein K06940 K06940; uncharacterized protein D NK55_06650 putative GTPase K06945 K06945; uncharacterized protein D NK55_09310 ylqC; KH domain RNA binding protein YlqC K06960 K06960; uncharacterized protein D NK55_01135 btpA; photosystem I biogenesis protein BtpA K06971 K06971; uncharacterized protein D NK55_06875 glyoxylase family protein K06991 K06991; uncharacterized protein D NK55_05275 protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D NK55_10855 4-vinyl reductase 4VR K07013 K07013; uncharacterized protein D NK55_08085 4-vinyl reductase 4VR K07013 K07013; uncharacterized protein D NK55_08100 hypothetical protein K07013 K07013; uncharacterized protein D NK55_00360 alpha/beta hydrolase fold protein K07019 K07019; uncharacterized protein D NK55_00665 hypothetical protein K07028 K07028; uncharacterized protein D NK55_07160 sulA; cell division inhibitor SulA K07071 K07071; uncharacterized protein D NK55_00020 oxidoreductase aldo/keto reductase family K07079 K07079; uncharacterized protein D NK55_08220 oxidoreductase aldo/keto reductase family K07079 K07079; uncharacterized protein D NK55_00040 permease K07089 K07089; uncharacterized protein D NK55_04680 putative permease DUF318 family K07089 K07089; uncharacterized protein D NK55_04565 sulfoacetate export translocase K07090 K07090; uncharacterized protein D NK55_06295 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D NK55_01215 protein of unknown function DUF839 K07093 K07093; uncharacterized protein D NK55_07025 phoX; Ca-dependent alkaline phosphatase PhoX K07093 K07093; uncharacterized protein D NK55_04435 phosphoribosyltransferase K07101 K07101; uncharacterized protein D NK55_06115 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein D NK55_06645 roadblock/LC7 family protein K07131 K07131; uncharacterized protein D NK55_11800 yidD; membrane insertion associated protein YidD K08998 K08998; uncharacterized protein D NK55_08210 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D NK55_09070 lipoprotein of unknown function DUF192 K09005 K09005; uncharacterized protein D NK55_03765 membrane protein UPF0182 family K09118 K09118; uncharacterized protein D NK55_06665 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D NK55_10725 hypothetical protein of Cupin superfamily K09705 K09705; uncharacterized protein D NK55_03000 protein of unknown function DUF309 K09763 K09763; uncharacterized protein D NK55_09400 protein of unknown function DUF212 K09775 K09775; uncharacterized protein D NK55_09965 YCII-related domain protein K09780 K09780; uncharacterized protein D NK55_03725 protein of unknown function DUF511 K09805 K09805; uncharacterized protein D NK55_02170 protein of unknown function DUF541 K09807 K09807; uncharacterized protein D NK55_05975 protein of unknown function DUF482 K09919 K09919; uncharacterized protein D NK55_09900 protein of unknown function DUF2062 K09928 K09928; uncharacterized protein D NK55_08340 Rho termination factor-like protein K09942 K09942; uncharacterized protein D NK55_01735 protein of unknown function DUF2237 K09966 K09966; uncharacterized protein D NK55_06380 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024