+D GENES KO #

  KEGG Orthology (KO) - Thermodesulfatator indicus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tid00010] D Thein_0091 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thein_0049 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thein_1559 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thein_1892 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Thein_1412 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thein_1408 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1410 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1411 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Thein_1014 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_0200 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_2014 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_2170 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thein_1409 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thein_0024 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_2065 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0353 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:tid00020] D Thein_0064 pyruvate carboxyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D Thein_1828 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Thein_0959 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Thein_1985 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Thein_0972 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:tid00030] D Thein_0049 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thein_0314 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Thein_0482 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thein_0556 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Thein_0380 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Thein_0176 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_1531 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Thein_2108 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Thein_2110 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Thein_1559 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thein_1892 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:tid00040] D Thein_1210 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thein_2140 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thein_0314 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Thein_1209 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:tid00051] D Thein_0887 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_0479 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Thein_1209 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thein_1559 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thein_1892 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Thein_1412 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thein_0380 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Thein_1406 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:tid00052] D Thein_0013 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Thein_0967 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Thein_1682 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Thein_2140 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_0091 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:tid00053] D Thein_1210 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thein_1217 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:tid00500] D Thein_2140 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thein_1173 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thein_1098 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thein_1280 Starch synthase catalytic domain-containing protein K00703 glgA; starch synthase [EC:2.4.1.21] D Thein_2045 glycoside hydrolase family 57 K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Thein_0790 4-alpha-glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Thein_0594 glycosyl transferase group 1 K13057 treT; trehalose synthase [EC:2.4.1.245] D Thein_0592 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_0091 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thein_0049 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tid00520] D Thein_0259 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Thein_1218 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Thein_0074 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Thein_1336 Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Thein_1096 bifunctional GlmU protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Thein_0478 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Thein_0588 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Thein_0432 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Thein_0712 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Thein_0015 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45] D Thein_0445 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Thein_0448 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Thein_0449 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Thein_0091 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_2140 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thein_1210 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thein_0013 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Thein_0967 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D Thein_1682 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Thein_1217 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Thein_1406 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Thein_0049 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thein_0479 Nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D Thein_0887 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Thein_1173 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thein_1098 Nucleotidyl transferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tid00620] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_1989 Acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thein_0973 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_1988 Pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_0564 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Thein_0353 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Thein_0264 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D Thein_1228 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Thein_0972 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Thein_0959 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Thein_1985 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Thein_1767 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thein_1409 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thein_0024 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_2065 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_0538 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Thein_0302 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Thein_1048 pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tid00630] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Thein_0002 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Thein_2025 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Thein_2024 CoB--CoM heterodisulfide reductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Thein_0104 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Thein_0560 Haloacid dehalogenase domain protein hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Thein_2196 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thein_0381 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thein_0130 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Thein_1821 Nitrate reductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Thein_2177 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Thein_1820 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Thein_0496 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma D Thein_1819 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:tid00640] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0353 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_1989 Acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thein_0973 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_1988 Pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] C 00650 Butanoate metabolism [PATH:tid00650] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_1918 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thein_1919 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tid00660] D Thein_1918 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thein_1919 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thein_1854 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Thein_1855 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Thein_0253 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tid00562] D Thein_1318 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Thein_0754 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Thein_0126 CDP-alcohol phosphatidyltransferase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34] D Thein_1412 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tid00190] D Thein_1625 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Thein_1626 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Thein_1627 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Thein_1628 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Thein_1629 respiratory-chain NADH dehydrogenase subunit 1 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Thein_1630 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Thein_1631 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Thein_1632 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Thein_1633 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Thein_1634 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Thein_0667 Cytochrome b/b6 domain protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Thein_0830 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Thein_0829 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Thein_1332 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Thein_1334 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Thein_1333 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Thein_1331 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Thein_1335 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Thein_1306 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Thein_1329 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Thein_1330 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Thein_1307 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Thein_0334 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:tid00710] D Thein_1411 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Thein_1408 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1410 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1559 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thein_0482 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thein_0380 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D Thein_1412 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thein_0314 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Thein_0556 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Thein_1767 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thein_1409 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:tid00720] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_0024 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_2065 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_1409 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thein_1767 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thein_0972 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Thein_0959 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Thein_1985 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Thein_1828 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Thein_1989 Acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thein_0973 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_1988 Pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_2192 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Thein_2191 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Thein_1161 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Thein_2184 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Thein_1435 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Thein_2179 dihydropteroate synthase DHPS K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D Thein_1422 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Thein_2190 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Thein_2183 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169] D Thein_2182 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:tid00680] D Thein_1821 Nitrate reductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Thein_2177 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Thein_1820 formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Thein_0496 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma D Thein_1819 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma D Thein_2071 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00125 fdhB; formate dehydrogenase (coenzyme F420) beta subunit [EC:1.17.98.3 1.8.98.6] D Thein_2182 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D Thein_1422 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Thein_2190 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Thein_0381 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thein_2170 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thein_1767 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Thein_1559 ketose-bisphosphate aldolase class-II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thein_1892 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thein_0501 hypothetical protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12] D Thein_1778 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D Thein_1779 FAD dependent oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_0748 methyl-viologen-reducing hydrogenase delta subunit K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_2189 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_2069 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_1781 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_0805 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_1780 heterodisulfide reductase subunit C-like protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_0804 4Fe-4S ferredoxin, iron-sulfur binding protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_2187 4Fe-4S ferredoxin iron-sulfur binding domain protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thein_1782 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Thein_2186 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Thein_2188 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Thein_2070 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Thein_1784 nickel-dependent hydrogenase large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D Thein_1783 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_0024 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_2065 pyruvate phosphate dikinase PEP/pyruvate-binding protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thein_1014 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_0200 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_2014 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_0855 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thein_0834 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:tid00910] D Thein_2224 molybdopterin oxidoreductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Thein_1053 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Thein_1054 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Thein_1049 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Thein_1020 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Thein_0424 multiheme cytochrome family protein K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D Thein_2217 hydroxylamine oxidase K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D Thein_0374 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Thein_2196 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thein_1055 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104] D Thein_0389 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tid00920] D Thein_1168 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thein_1671 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Thein_0208 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D Thein_0285 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D Thein_0286 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D Thein_0306 nitrite and sulphite reductase 4Fe-4S region K00385 asrC; anaerobic sulfite reductase subunit C D Thein_2043 Proto-chlorophyllide reductase 57 kD subunit K00385 asrC; anaerobic sulfite reductase subunit C D Thein_0405 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Thein_0404 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Thein_1549 Nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D Thein_1550 4Fe-4S ferredoxin, iron-sulfur binding protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D Thein_1551 cytochrome c family protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D Thein_1552 4Fe-4S ferredoxin iron-sulfur binding domain protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O D Thein_1553 Polysulphide reductase NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P D Thein_1622 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tid00061] D Thein_1989 Acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thein_0973 Carbamoyl-phosphate synthase L chain ATP-binding protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_1988 Pyruvate carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thein_0378 acyl carrier protein K02078 acpP; acyl carrier protein D Thein_0129 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Thein_1720 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Thein_0379 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Thein_1518 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thein_1636 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation D Thein_1636 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:tid00074] D Thein_0351 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Thein_0378 acyl carrier protein K02078 acpP; acyl carrier protein D Thein_0129 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tid00561] D Thein_1721 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Thein_1389 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Thein_0261 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:tid00564] D Thein_1568 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Thein_1389 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Thein_0261 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Thein_0678 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Thein_2090 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Thein_0537 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Thein_0536 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Thein_0915 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Thein_0846 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tid00230] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_1531 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Thein_1038 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Thein_1214 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Thein_2050 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Thein_0897 Phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D Thein_0917 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Thein_0471 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Thein_0472 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Thein_0070 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Thein_1867 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Thein_0658 Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Thein_2081 NAD pyrophosphatase/5'-nucleotidase NadN K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Thein_0770 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Thein_0017 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Thein_0620 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Thein_0148 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Thein_0798 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Thein_1691 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Thein_1566 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Thein_0085 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Thein_0359 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Thein_0124 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Thein_1073 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Thein_0579 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Thein_0147 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Thein_1987 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Thein_1890 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Thein_1268 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Thein_1484 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Thein_1367 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Thein_0776 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thein_1492 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Thein_0891 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D Thein_1671 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Thein_1168 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thein_1137 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Thein_1138 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Thein_1139 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:tid00240] D Thein_0143 hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thein_0257 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thein_1068 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Thein_0992 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Thein_0991 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Thein_0555 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Thein_0969 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Thein_0473 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Thein_1546 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Thein_2093 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Thein_0798 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Thein_0776 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thein_0367 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Thein_0839 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Thein_2150 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Thein_2081 NAD pyrophosphatase/5'-nucleotidase NadN K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Thein_0770 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Thein_1587 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3] D Thein_0947 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Thein_1268 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D Thein_0124 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Thein_0359 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Thein_0382 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Thein_1070 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Thein_1191 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Thein_1190 thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tid00250] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_0201 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Thein_1736 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thein_0709 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thein_0043 tyrosine/nicotianamine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Thein_0491 fumarate lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Thein_0557 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Thein_1300 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Thein_1987 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Thein_1867 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Thein_0992 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Thein_2196 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thein_0143 hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thein_0257 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thein_1068 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Thein_2050 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Thein_1218 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Thein_1038 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tid00260] D Thein_0303 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thein_1514 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thein_0619 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Thein_0402 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Thein_0381 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thein_1014 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_0200 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_2014 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thein_0855 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thein_0130 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Thein_0537 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Thein_0386 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Thein_0819 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Thein_0818 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thein_1281 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:tid00270] D Thein_1608 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Thein_2202 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Thein_0660 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Thein_1874 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Thein_0659 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thein_1167 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thein_1136 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Thein_1319 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Thein_2201 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Thein_0303 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thein_1514 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thein_0619 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Thein_1355 protein of unknown function DUF39 K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D Thein_0533 NIL domain protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D Thein_1369 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_0386 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Thein_1427 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Thein_0855 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:tid00280] D Thein_1369 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tid00290] D Thein_1854 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Thein_1855 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Thein_0253 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Thein_1918 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thein_1919 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thein_1849 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Thein_0006 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Thein_1369 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thein_0043 tyrosine/nicotianamine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Thein_0538 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Thein_0302 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tid00300] D Thein_0619 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Thein_0303 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thein_1514 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thein_1125 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Thein_1126 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Thein_0994 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Thein_1124 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Thein_0755 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Thein_0142 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Thein_1123 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Thein_0438 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Thein_0437 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tid00310] D Thein_0386 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Thein_2058 lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2] C 00220 Arginine biosynthesis [PATH:tid00220] D Thein_1105 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Thein_0557 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Thein_1300 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Thein_1137 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Thein_1138 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Thein_1139 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Thein_2050 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Thein_2196 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thein_0143 hypothetical protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thein_0257 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thein_1068 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_0043 tyrosine/nicotianamine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Thein_0807 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Thein_0768 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Thein_0474 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Thein_1375 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Thein_0994 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Thein_0954 peptidase M20 K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:tid00330] D Thein_1445 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D Thein_0528 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D Thein_0546 5-oxoprolinase (ATP-hydrolyzing) K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D Thein_1715 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D Thein_0547 5-oxoprolinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D Thein_1875 agmatinase K27683 apauh; N1-aminopropylagmatine ureohydrolase [EC:3.5.3.24] D Thein_0659 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thein_1167 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thein_0660 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Thein_1874 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Thein_1299 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Thein_1032 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Thein_1696 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:tid00340] D Thein_0999 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Thein_0998 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Thein_1314 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Thein_0970 imidazoleglycerol phosphate synthase, cyclase subunit K01663 HIS7; imidazole glycerol-phosphate synthase [EC:4.3.2.10] D Thein_1212 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Thein_2149 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thein_1983 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:tid00350] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_2149 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:tid00360] D Thein_2086 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Thein_0154 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_2149 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tid00400] D Thein_0598 DAHP synthetase I/KDSA K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Thein_2208 DAHP synthetase I/KDSA K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Thein_0957 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Thein_0360 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Thein_1921 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Thein_1923 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Thein_1922 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Thein_0114 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Thein_0845 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Thein_0844 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Thein_0949 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Thein_2123 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Thein_1121 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Thein_0819 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Thein_0818 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thein_1281 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thein_0929 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Thein_0939 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_2149 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tid00410] D Thein_0297 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Thein_0298 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D Thein_2052 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tid00450] D Thein_1152 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Thein_1229 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Thein_1062 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Thein_1168 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thein_1447 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Thein_0419 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Thein_2120 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tid00460] D Thein_2052 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thein_0381 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tid00470] D Thein_1247 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Thein_0262 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thein_0386 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Thein_2050 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Thein_1844 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Thein_0435 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Thein_1124 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Thein_0142 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Thein_1123 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tid00480] D Thein_2052 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thein_2053 glutamate--cysteine ligase GCS2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Thein_1728 protein of unknown function DUF399 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Thein_1828 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Thein_0659 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thein_1167 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tid00540] D Thein_1519 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thein_0988 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Thein_1517 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Thein_1520 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Thein_1522 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Thein_1679 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Thein_1279 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Thein_1397 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Thein_1398 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Thein_0996 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Thein_0083 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Thein_0152 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Thein_0867 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Thein_0601 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Thein_1312 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Thein_1023 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D Thein_1311 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Thein_1313 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Thein_0691 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tid00541] D Thein_2140 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thein_1682 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Thein_1210 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thein_1217 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Thein_0729 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thein_0726 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Thein_0727 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thein_0725 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Thein_0887 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Thein_1336 Glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Thein_1096 bifunctional GlmU protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Thein_0445 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Thein_0448 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Thein_0449 pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D Thein_0712 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Thein_0015 NAD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:5.1.3.7 5.1.3.45] C 00550 Peptidoglycan biosynthesis [PATH:tid00550] D Thein_0588 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Thein_0432 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Thein_0433 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Thein_0435 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Thein_0438 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Thein_0262 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thein_0437 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Thein_2091 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Thein_0649 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thein_0436 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Thein_0434 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Thein_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thein_1327 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Thein_1297 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:tid00552] D Thein_0649 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tid00730] D Thein_1104 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Thein_0524 phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D Thein_0876 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thein_2046 Thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Thein_0493 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D Thein_1541 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Thein_1804 thiazole biosynthesis enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D Thein_2016 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Thein_2017 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Thein_0799 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Thein_0065 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_1762 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_1484 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Thein_1367 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tid00740] D Thein_1877 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Thein_0577 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Thein_1878 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Thein_0397 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Thein_1066 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Thein_2016 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D Thein_0175 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tid00750] D Thein_0596 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Thein_1494 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Thein_0402 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:tid00760] D Thein_0201 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Thein_0791 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Thein_1805 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Thein_1115 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Thein_0017 inosine guanosine and xanthosine phosphorylase family K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D Thein_2081 NAD pyrophosphatase/5'-nucleotidase NadN K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Thein_0770 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Thein_1695 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Thein_0776 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thein_0835 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Thein_1525 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Thein_0921 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:tid00770] D Thein_1918 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thein_1919 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thein_1849 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Thein_0006 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Thein_0747 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Thein_0298 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Thein_0572 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Thein_1156 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Thein_0776 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thein_1207 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Thein_1871 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Thein_0351 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Thein_1369 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thein_0297 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:tid00780] D Thein_2102 Methyltransferase type 11 K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Thein_0379 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Thein_1518 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thein_2103 protein of unknown function DUF452 K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Thein_0028 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Thein_0029 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Thein_2101 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Thein_0031 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Thein_0500 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6] D Thein_0948 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Thein_1909 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism D Thein_0130 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tid00790] D Thein_0760 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Thein_0065 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_1762 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_0756 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Thein_0077 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Thein_1041 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Thein_1877 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Thein_1656 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D Thein_0896 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Thein_0895 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Thein_2200 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Thein_1016 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Thein_1651 beta-lactamase domain-containing protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Thein_1100 metal-dependent hydrolase of the beta-lactamase superfamily K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Thein_0131 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Thein_0010 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Thein_0637 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Thein_1853 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Thein_1872 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Thein_0287 formate dehydrogenase accessory protein FdhD K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tid00670] D Thein_2192 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D Thein_2191 Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Thein_0381 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thein_0658 Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Thein_2154 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Thein_1190 thymidylate synthase complementing protein ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Thein_1161 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Thein_2184 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Thein_0047 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D Thein_0979 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tid00860] D Thein_1322 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thein_1414 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Thein_0060 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Thein_1683 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Thein_0872 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Thein_0873 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D Thein_0177 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Thein_0848 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Thein_0059 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Thein_0172 putative transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Thein_0362 Radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase D Thein_0772 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Thein_1903 anaerobic cobalt chelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Thein_1904 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Thein_1897 precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D Thein_1898 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Thein_1905 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Thein_1899 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Thein_1906 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Thein_1554 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Thein_1896 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Thein_0576 Magnesium chelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Thein_0837 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Thein_0823 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Thein_1840 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Thein_1433 Adenosylcobinamide-phosphateguanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Thein_1842 cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Thein_1841 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Thein_0833 aminotransferase class I and II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D Thein_1998 Magnesium chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Thein_1997 Magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tid00130] D Thein_0174 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Thein_1039 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Thein_0175 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Thein_0042 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Thein_0700 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D Thein_1226 Radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D Thein_1034 amidohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D Thein_1289 futalosine nucleosidase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D Thein_1033 Radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D Thein_1288 hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tid00900] D Thein_1541 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Thein_2089 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Thein_0265 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Thein_1530 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Thein_0583 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Thein_0752 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Thein_0175 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Thein_1539 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Thein_0558 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Thein_2091 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Thein_0482 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tid00523] D Thein_0729 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thein_0726 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Thein_0727 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thein_0725 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Thein_0726 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:tid00332] D Thein_1032 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Thein_1696 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tid00261] D Thein_1168 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thein_0303 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thein_1514 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thein_1125 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Thein_1126 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tid00521] D Thein_0091 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thein_2165 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Thein_0754 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Thein_1318 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Thein_0729 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thein_0726 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Thein_0727 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thein_0725 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Thein_0091 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:tid00525] D Thein_0729 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thein_0726 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tid00401] D Thein_0939 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_2149 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Thein_0845 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Thein_0844 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Thein_0129 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Thein_0378 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tid00999] D Thein_1608 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Thein_2202 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Thein_1921 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation [PATH:tid00627] D Thein_0564 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Thein_0175 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:tid00625] D Thein_1054 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Thein_1049 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Thein_1053 nitrogenase component I, alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Thein_0944 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D Thein_0944 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:tid00633] D Thein_0289 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thein_1422 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Thein_2190 carbon-monoxide dehydrogenase, catalytic subunit K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4] D Thein_1420 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Thein_1421 thiamine pyrophosphate TPP-binding domain-containing protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Thein_1418 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Thein_1419 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Thein_0405 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Thein_0404 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D Thein_1137 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Thein_1138 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Thein_1139 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tid03020] D Thein_0273 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Thein_0272 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Thein_1490 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Thein_0008 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tid03010] D Thein_0145 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Thein_2095 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Thein_1469 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Thein_1489 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Thein_1480 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Thein_1690 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Thein_1459 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Thein_1477 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Thein_1374 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Thein_1462 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Thein_1488 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Thein_1458 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Thein_1487 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Thein_1476 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Thein_1642 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Thein_1241 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Thein_1472 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Thein_1689 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Thein_1467 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Thein_2013 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Thein_0037 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Thein_0276 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Thein_1466 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Thein_1463 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Thein_1464 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Thein_1475 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Thein_1478 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Thein_0274 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Thein_1688 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Thein_0275 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Thein_0277 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Thein_1373 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Thein_1473 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Thein_1482 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Thein_1470 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Thein_1491 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Thein_1479 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Thein_0645 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Thein_1595 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Thein_0885 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Thein_1468 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Thein_1465 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Thein_1474 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Thein_1532 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Thein_0884 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Thein_0580 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Thein_1471 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Thein_1481 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Thein_0553 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Thein_1722 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Thein_0280 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Thein_0635 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Thein_1594 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Thein_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thein_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thein_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thein_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thein_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thein_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tid00970] D Thein_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0057 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0028 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0048 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0027 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Thein_R0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Thein_R0024 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Thein_R0041 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thein_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thein_R0058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thein_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thein_R0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thein_R0003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thein_R0036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thein_R0040 tRNA-His K14226 tRNA-His; tRNA His D Thein_R0012 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thein_R0020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thein_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thein_R0059 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thein_R0001 tRNA-Met K14230 tRNA-Met; tRNA Met D Thein_R0025 tRNA-Met K14230 tRNA-Met; tRNA Met D Thein_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met D Thein_R0038 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Thein_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thein_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thein_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thein_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0050 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thein_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thein_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thein_R0005 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Thein_R0008 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Thein_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val D Thein_R0022 tRNA-Val K14237 tRNA-Val; tRNA Val D Thein_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val D Thein_R0055 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Thein_1322 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thein_0522 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Thein_1320 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Thein_0523 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Thein_2079 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Thein_0591 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thein_1454 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Thein_1455 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Thein_1592 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Thein_2136 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Thein_0419 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Thein_0670 cysteine synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thein_0774 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thein_2120 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Thein_2154 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Thein_0907 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Thein_1827 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thein_1381 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Thein_0606 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Thein_0809 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thein_0762 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Thein_1301 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Thein_1596 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Thein_1597 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Thein_1915 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thein_2105 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tid03060] D Thein_1483 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Thein_0279 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thein_1413 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Thein_0169 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Thein_0822 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Thein_0632 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thein_1286 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thein_1240 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thein_R0054 RNA component of signal recognition particle K01983 ffs; SRP RNA D Thein_1368 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thein_1588 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Thein_0480 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Thein_1248 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Thein_0481 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Thein_2051 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC D Thein_1249 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC D Thein_0517 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Thein_1382 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tid04122] D Thein_0876 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thein_0055 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Thein_0624 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Thein_0534 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Thein_1516 protein of unknown function DUF814 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Thein_0131 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Thein_2211 MoaD family protein K03636 moaD; sulfur-carrier protein D Thein_2210 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Thein_0010 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Thein_2046 Thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:tid03018] D Thein_1698 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Thein_2170 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thein_1643 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Thein_0243 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Thein_0554 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Thein_1267 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thein_1205 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thein_1385 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thein_0943 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Thein_1766 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tid03030] D Thein_2031 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thein_1234 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thein_0587 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thein_0068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thein_1003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thein_0581 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Thein_0035 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Thein_1686 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_1950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_0644 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Thein_1717 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thein_0156 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tid03410] D Thein_0953 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Thein_0906 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Thein_1046 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Thein_1058 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Thein_1717 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thein_2168 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thein_0156 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tid03420] D Thein_0882 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Thein_2156 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Thein_0307 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Thein_1712 ABC transporter related protein K03701 uvrA; excinuclease ABC subunit A D Thein_1197 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Thein_0584 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Thein_0938 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thein_0607 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thein_1717 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thein_0156 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tid03430] D Thein_1045 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Thein_0036 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Thein_0340 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Thein_0938 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thein_0607 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thein_1536 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Thein_1538 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Thein_2168 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thein_1686 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_1950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_2031 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thein_1003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thein_1234 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thein_0068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thein_0587 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thein_0156 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tid03440] D Thein_2168 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thein_1686 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_1950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_0879 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Thein_1232 recombination protein RecR K06187 recR; recombination protein RecR D Thein_0600 recA protein K03553 recA; recombination protein RecA D Thein_1717 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thein_0745 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Thein_0746 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Thein_0744 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Thein_0618 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thein_2031 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thein_1003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thein_1234 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thein_0068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thein_0587 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thein_0365 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:tid03450] D Thein_1425 Ku protein K10979 ku; DNA end-binding protein Ku D Thein_1426 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tid02010] D Thein_0317 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Thein_0318 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Thein_0319 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Thein_1647 binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein D Thein_1646 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Thein_0489 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Thein_0487 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein D Thein_0486 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Thein_2161 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Thein_2158 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Thein_2159 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Thein_2160 ABC transporter related protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Thein_1178 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Thein_1180 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Thein_1179 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Thein_0675 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Thein_0676 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Thein_0677 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Thein_0674 ABC transporter related protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Thein_0665 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thein_2178 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thein_1293 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Thein_1292 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Thein_1291 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Thein_0559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1860 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1861 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_0251 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1309 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1857 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_0250 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_1079 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_0249 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Thein_1856 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Thein_1160 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_2084 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_1859 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_1858 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Thein_2085 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Thein_1141 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein D Thein_1142 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D Thein_1143 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D Thein_1144 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Thein_1145 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D Thein_0125 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Thein_1863 ABC-3 protein K09816 znuB; zinc transport system permease protein D Thein_1864 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Thein_1008 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Thein_1010 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Thein_1011 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Thein_1296 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein D Thein_1007 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein D Thein_1009 hypothetical protein K16915 cbiL; nickel transport protein D Thein_2001 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Thein_0605 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Thein_0604 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Thein_0698 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Thein_0699 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Thein_1401 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Thein_2145 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Thein_2144 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Thein_0693 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) [PATH:tid02060] D Thein_1175 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Thein_1174 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Thein_1406 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Thein_1404 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:tid03070] D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_2133 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Thein_2126 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F D Thein_2125 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Thein_2124 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Thein_0169 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Thein_0279 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thein_1413 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Thein_1483 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Thein_0822 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Thein_0632 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thein_1286 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thein_1368 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thein_1240 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thein_1588 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Thein_0480 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Thein_1248 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Thein_0481 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Thein_2051 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC D Thein_1249 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:tid02020] D Thein_0395 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Thein_0396 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Thein_2220 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Thein_0065 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_1762 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_0665 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thein_2178 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thein_1025 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Thein_0451 flagellin domain protein K02406 fliC; flagellin D Thein_0190 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Thein_0312 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Thein_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Thein_2219 integral membrane sensor signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Thein_0014 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D Thein_0456 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Thein_2197 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Thein_0203 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Thein_2198 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Thein_2196 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thein_1163 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Thein_1162 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Thein_1047 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Thein_0942 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Thein_1130 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Thein_0671 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Thein_0483 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thein_0484 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Thein_1402 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Thein_0204 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Thein_0205 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Thein_0289 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thein_0288 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Thein_0348 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thein_0100 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_1663 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_2166 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_0315 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_2061 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Thein_0345 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Thein_0347 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thein_0350 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0191 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0349 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thein_1194 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D Thein_0079 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR D Thein_0550 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Thein_1061 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thein_0667 Cytochrome b/b6 domain protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Thein_0830 cytochrome bd ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Thein_0829 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_1224 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Thein_1380 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thein_0688 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tid02024] D Thein_0845 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Thein_0844 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Thein_0559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1860 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1861 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_0251 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1309 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1857 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_0250 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_1079 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_0249 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Thein_1856 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Thein_1160 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_2084 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_1859 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_1858 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Thein_2085 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Thein_1636 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thein_0577 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Thein_1708 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Thein_1661 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thein_0508 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thein_0985 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thein_1660 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thein_0118 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thein_0984 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thein_1659 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thein_0983 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thein_0119 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thein_0784 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thein_1658 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thein_0982 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thein_0981 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Thein_0632 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thein_0169 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Thein_0279 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thein_1413 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Thein_1483 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Thein_0822 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Thein_1286 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thein_1368 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thein_1240 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thein_0014 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tid02030] D Thein_0100 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_1663 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_2166 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_0315 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_2061 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Thein_0347 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thein_0345 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Thein_0350 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0191 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_1644 chemotaxis protein, CheX K03409 cheX; chemotaxis protein CheX D Thein_1893 CheC-like protein K03409 cheX; chemotaxis protein CheX D Thein_0349 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thein_1699 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thein_0348 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thein_1813 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Thein_0180 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Thein_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thein_0312 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Thein_0311 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tid02040] D Thein_1811 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Thein_1812 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Thein_1813 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Thein_1814 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Thein_1815 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Thein_1816 hypothetical protein K02413 fliJ; flagellar protein FliJ D Thein_2099 Flagellar hook-length control protein-like, C-terminal domain protein K02414 fliK; flagellar hook-length control protein FliK D Thein_0179 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Thein_0180 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Thein_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thein_0182 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D Thein_0183 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Thein_0184 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Thein_0185 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Thein_0187 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Thein_0186 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Thein_0464 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Thein_1809 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Thein_1810 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Thein_2098 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Thein_2096 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Thein_2097 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Thein_0466 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Thein_0465 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Thein_0463 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Thein_0462 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Thein_0461 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Thein_0458 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Thein_0457 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Thein_0451 flagellin domain protein K02406 fliC; flagellin D Thein_0454 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Thein_0453 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Thein_0312 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Thein_0311 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Thein_0688 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Thein_0816 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Thein_0034 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Thein_1402 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Thein_0190 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Thein_2170 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tid01501] D Thein_0259 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Thein_1708 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thein_1327 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tid01502] D Thein_2219 integral membrane sensor signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Thein_0262 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thein_1247 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Thein_0437 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Thein_0436 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Thein_0434 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tid01503] D Thein_1044 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Thein_1025 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_1519 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tid01000] C 01001 Protein kinases [BR:tid01001] D Thein_0022 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Thein_1220 putative exopolysaccharide biosynthesis protein (protein-tyrosine kinase) K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Thein_0395 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Thein_2219 integral membrane sensor signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Thein_1163 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Thein_0483 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thein_0005 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_1131 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_2063 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_0323 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_0347 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thein_1194 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D Thein_1061 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thein_1380 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tid01009] D Thein_2201 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:tid01002] D Thein_1382 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D Thein_1264 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Thein_0291 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Thein_1785 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Thein_1566 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Thein_1038 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Thein_1218 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Thein_1736 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thein_0709 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thein_1114 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Thein_0685 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Thein_0836 CAAX prenyl protease-related protein K07052 K07052; CAAX protease family protein D Thein_1728 protein of unknown function DUF399 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Thein_0626 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-] D Thein_0563 peptidase T-like protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D Thein_1485 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Thein_1157 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Thein_0078 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Thein_1677 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Thein_1239 peptidase M48 Ste24p K23010 OMA1; metalloendopeptidase OMA1, mitochondrial [EC:3.4.24.-] D Thein_2088 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Thein_2112 peptidase zinc-dependent K06974 amzA; archaemetzincin [EC:3.4.-.-] D Thein_1843 peptidase zinc-dependent K06974 amzA; archaemetzincin [EC:3.4.-.-] D Thein_1025 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Thein_1297 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Thein_0863 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Thein_0865 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Thein_1424 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Thein_1862 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Thein_0517 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Thein_2147 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Thein_0146 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-] D Thein_1563 Rhomboid family protein K07059 K07059; rhomboid family protein D Thein_0785 Rhomboid family protein K07059 K07059; rhomboid family protein D Thein_0571 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Thein_0682 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Thein_2052 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thein_0795 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Thein_1037 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:tid01003] D Thein_1081 glycosyl transferase group 1 K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D Thein_1745 glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D Thein_1601 glycosyl transferase group 1 K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D Thein_1280 Starch synthase catalytic domain-containing protein K00703 glgA; starch synthase [EC:2.4.1.21] D Thein_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thein_0592 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tid01005] D Thein_1519 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thein_1522 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Thein_0988 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Thein_1517 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Thein_1520 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Thein_1679 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Thein_0083 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Thein_0152 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Thein_1397 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Thein_0996 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Thein_1398 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Thein_1279 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Thein_0601 PfkB domain protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Thein_1023 rfaE bifunctional protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D Thein_1311 lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Thein_1313 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Thein_0691 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Thein_0867 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Thein_1312 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tid01011] D Thein_0588 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Thein_0432 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Thein_0433 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Thein_0435 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Thein_0438 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Thein_0262 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thein_1247 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Thein_1844 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Thein_0571 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D Thein_0436 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Thein_0434 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Thein_0649 undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thein_0093 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Thein_0765 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thein_1327 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Thein_1297 beta-lactamase K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D Thein_0685 ErfK/YbiS/YcfS/YnhG family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Thein_1669 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Thein_0927 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Thein_0157 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Thein_0980 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Thein_1044 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tid01004] D Thein_0129 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Thein_1720 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Thein_0379 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Thein_1518 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thein_1244 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0153 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thein_0353 CoA-binding domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Thein_1636 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thein_1721 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Thein_1389 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Thein_0261 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tid01008] C 01006 Prenyltransferases [BR:tid01006] D Thein_1539 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Thein_0558 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Thein_2091 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Thein_0341 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Thein_0174 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:tid01007] D Thein_1322 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thein_1915 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thein_2105 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Thein_0670 cysteine synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thein_0774 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thein_0809 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thein_2120 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Thein_1381 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Thein_0907 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Thein_1827 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thein_0606 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Thein_0591 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thein_1301 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Thein_1454 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Thein_1455 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Thein_2136 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Thein_0762 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Thein_1592 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Thein_2079 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Thein_1596 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Thein_1597 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Thein_1377 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thein_2212 aminotransferase class I and II K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D Thein_0043 tyrosine/nicotianamine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Thein_0755 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Thein_2149 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thein_0028 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Thein_0994 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Thein_0029 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Thein_0060 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Thein_1369 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thein_1656 para-aminobenzoate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D Thein_0712 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:tid00194] D Thein_0668 Rieske (2Fe-2S) iron-sulfur domain protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D Thein_1335 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Thein_1334 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Thein_1333 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Thein_1332 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Thein_1331 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Thein_1329 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Thein_1330 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Thein_1307 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Thein_1306 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Thein_1304 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tid03000] D Thein_1256 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Thein_0165 regulatory protein MerR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D Thein_0355 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Thein_1269 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Thein_0098 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D Thein_0116 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Thein_1431 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Thein_0948 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Thein_1909 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Thein_1047 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Thein_0942 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein D Thein_2018 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Thein_1030 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor D Thein_2229 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Thein_1939 ribbon-helix-helix protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Thein_0842 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D Thein_0802 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0069 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0977 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_1851 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D Thein_1203 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Thein_0947 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Thein_0011 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Thein_0653 C4-type zinc finger DksA/TraR family protein K06204 dksA; RNA polymerase-binding transcription factor D Thein_2172 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR D Thein_0442 MraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tid03021] D Thein_1490 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Thein_0273 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Thein_0272 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Thein_0008 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Thein_0816 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Thein_0034 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor D Thein_0900 putative RNA polymerase, sigma 70 family subunit K03089 rpoH; RNA polymerase sigma-32 factor D Thein_1402 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor D Thein_0190 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Thein_0213 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Thein_1879 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Thein_0278 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Thein_0011 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Thein_0653 C4-type zinc finger DksA/TraR family protein K06204 dksA; RNA polymerase-binding transcription factor D Thein_0173 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Thein_0554 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tid03019] D Thein_0018 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Thein_0986 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Thein_1267 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-] D Thein_0243 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Thein_1698 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Thein_2170 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thein_1643 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Thein_0554 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Thein_0888 phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thein_1205 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thein_1385 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thein_0943 Polynucleotide adenylyltransferase region K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Thein_1766 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Thein_0456 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator D Thein_1405 hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:tid03011] D Thein_0145 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Thein_2095 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Thein_1469 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Thein_1489 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Thein_1480 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Thein_1690 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Thein_1459 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Thein_1477 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Thein_1374 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Thein_1462 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Thein_1488 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Thein_1458 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D Thein_1487 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Thein_1476 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Thein_1642 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Thein_1241 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D Thein_1472 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Thein_1689 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Thein_1467 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Thein_2013 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D Thein_0037 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D Thein_0276 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Thein_1466 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Thein_1463 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Thein_1464 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4 D Thein_1475 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Thein_1478 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Thein_1688 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D Thein_0275 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Thein_0277 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Thein_0274 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D Thein_1373 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Thein_1473 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D Thein_1482 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Thein_1470 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D Thein_1491 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D Thein_1479 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D Thein_0645 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Thein_1595 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Thein_0885 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D Thein_1468 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Thein_1465 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Thein_1474 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Thein_0884 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D Thein_0580 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D Thein_1471 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Thein_1481 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D Thein_0553 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Thein_1722 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Thein_0280 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Thein_0635 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D Thein_1594 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D Thein_1532 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D Thein_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thein_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thein_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thein_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thein_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thein_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tid03009] D Thein_0986 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Thein_0987 GTP-binding protein Era K03595 era; GTPase D Thein_1031 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Thein_0011 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Thein_0653 C4-type zinc finger DksA/TraR family protein K06204 dksA; RNA polymerase-binding transcription factor D Thein_0213 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Thein_1879 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Thein_0278 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG D Thein_2206 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Thein_0040 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Thein_1206 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Thein_1676 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Thein_1195 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Thein_0840 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Thein_0441 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Thein_0751 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Thein_0763 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Thein_0084 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Thein_1337 tRNA/rRNA methyltransferase (SpoU) K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Thein_1159 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Thein_2117 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Thein_1110 RNA methylase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Thein_0859 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Thein_0669 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Thein_1065 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Thein_1198 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Thein_1869 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Thein_1407 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Thein_0051 RimK domain protein ATP-grasp K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Thein_0127 RimK domain protein ATP-grasp K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Thein_1243 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Thein_0296 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Thein_0532 protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Thein_1675 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Thein_0573 methyltransferase small K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Thein_1641 methyltransferase small K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Thein_0018 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-] D Thein_1986 ribosome-associated GTPase EngA K03977 engA; GTPase D Thein_0206 GTP-binding proten HflX K03665 hflX; GTPase D Thein_0038 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Thein_0579 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Thein_0209 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Thein_0214 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Thein_1013 iojap-like protein K09710 ybeB; ribosome-associated protein D Thein_1403 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor D Thein_0950 protein of unknown function DUF933 K06942 ychF; ribosome-binding ATPase D Thein_1723 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tid03016] D Thein_2039 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Thein_0246 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Thein_0167 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease D Thein_1322 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thein_0762 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Thein_1381 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Thein_1827 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thein_2120 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Thein_0809 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thein_0606 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Thein_0591 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thein_2079 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Thein_1592 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Thein_2136 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Thein_0670 cysteine synthase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thein_0774 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thein_0907 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Thein_1301 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Thein_1596 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Thein_1597 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Thein_1915 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thein_2105 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Thein_1640 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Thein_0245 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Thein_1560 tRNA methyltransferase complex GCD14 subunit K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Thein_2116 Uncharacterized protein family UPF0066 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Thein_1376 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Thein_0207 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Thein_1285 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Thein_0876 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thein_0038 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Thein_0341 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Thein_0630 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Thein_0901 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Thein_1447 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Thein_0634 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Thein_R0047 RNA component of RNaseP K01978 rnpB; M1 RNA D Thein_2060 protein of unknown function UPF0278 K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D Thein_1692 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Thein_1315 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Thein_0990 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Thein_0817 phosphotransferase KptA/Tpt1 K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D Thein_1454 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Thein_1455 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Thein_1912 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Thein_1558 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Thein_0935 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Thein_0951 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Thein_1719 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Thein_0860 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Thein_0647 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Thein_1868 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D Thein_1776 RNA methylase, NOL1/NOP2/sun family K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D Thein_0534 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Thein_1516 protein of unknown function DUF814 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Thein_0509 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Thein_1093 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Thein_0055 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Thein_0624 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Thein_1074 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Thein_2200 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Thein_0896 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Thein_0895 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Thein_1016 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Thein_1002 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Thein_0821 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Thein_2046 Thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Thein_0117 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Thein_2205 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Thein_1836 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Thein_0243 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Thein_1643 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:tid03012] D Thein_0211 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Thein_1593 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Thein_2094 translation elongation factor Ts K02357 tsf; elongation factor Ts D Thein_1461 translation elongation factor Tu K02358 tuf; elongation factor Tu D Thein_0281 translation elongation factor Tu K02358 tuf; elongation factor Tu D Thein_1526 small GTP-binding protein K02355 fusA; elongation factor G D Thein_1388 translation elongation factor G K02355 fusA; elongation factor G D Thein_1460 translation elongation factor G K02355 fusA; elongation factor G D Thein_2111 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D Thein_0552 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D Thein_2092 ribosome recycling factor K02838 frr; ribosome recycling factor D Thein_0589 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Thein_1533 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Thein_1486 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D Thein_0814 translation elongation factor P K02356 efp; elongation factor P D Thein_0694 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:tid03110] D Thein_2100 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Thein_0864 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Thein_0364 ATPase AAA-2 domain protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Thein_0683 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Thein_1205 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thein_1385 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thein_0009 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Thein_1535 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Thein_0346 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Thein_0151 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Thein_1298 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Thein_1204 GrpE protein K03687 GRPE; molecular chaperone GrpE D Thein_0530 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Thein_0120 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Thein_0531 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Thein_1310 hypothetical protein K13993 HSP20; HSP20 family protein D Thein_1384 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Thein_1025 protease Do K04771 degP; serine protease Do [EC:3.4.21.107] D Thein_0078 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Thein_1306 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Thein_0293 hydrogenase expression/synthesis HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Thein_0294 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Thein_0258 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Thein_0199 peptidylprolyl isomerase FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Thein_0788 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Thein_1029 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Thein_0881 SurA domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Thein_1153 thioredoxin K03671 TXN; thioredoxin D Thein_0853 disulfide bond isomerase, DsbC/G K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Thein_1928 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:tid04131] D Thein_0798 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Thein_1408 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1410 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1099 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1 C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:tid03032] D Thein_1725 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Thein_1598 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Thein_0541 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Thein_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Thein_0581 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Thein_0035 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Thein_1686 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_1950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_2031 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thein_1003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thein_0068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thein_0587 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thein_1234 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thein_0644 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Thein_1717 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thein_0156 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Thein_1227 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Thein_1004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Thein_1586 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Thein_1451 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:tid03036] D Thein_0986 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Thein_1725 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Thein_1598 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Thein_0541 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Thein_0151 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein D Thein_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Thein_1687 SMC domain protein K03529 smc; chromosome segregation protein D Thein_2114 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Thein_0398 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Thein_0430 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Thein_0815 Septum formation initiator K05589 ftsB; cell division protein FtsB D Thein_2144 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Thein_0793 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Thein_0431 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ D Thein_2145 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Thein_0429 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Thein_1044 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Thein_1773 DivIVA domain protein K04074 divIVA; cell division initiation protein D Thein_1324 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Thein_1325 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Thein_1328 cell cycle protein K05837 rodA; rod shape determining protein RodA D Thein_0978 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Thein_0639 ParA protein K03496 parA; chromosome partitioning protein D Thein_0802 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0069 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0977 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0901 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Thein_1195 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Thein_0840 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Thein_0860 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D Thein_0681 integrase family protein K03733 xerC; integrase/recombinase XerC D Thein_2038 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Thein_0629 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Thein_0102 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Thein_1258 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tid03400] D Thein_0178 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Thein_0953 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Thein_1317 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Thein_1866 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Thein_1191 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Thein_1046 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Thein_0906 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Thein_1058 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Thein_0266 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Thein_2168 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thein_0156 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Thein_1717 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thein_2156 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Thein_0307 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Thein_1712 ABC transporter related protein K03701 uvrA; excinuclease ABC subunit A D Thein_1197 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B D Thein_0584 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C D Thein_0938 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thein_0607 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thein_0273 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Thein_0272 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Thein_1490 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Thein_0008 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Thein_0882 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Thein_1045 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Thein_0036 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2 D Thein_0340 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Thein_1536 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Thein_1538 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Thein_2031 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thein_1003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thein_0068 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thein_0587 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thein_1234 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thein_1686 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_1950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_0600 recA protein K03553 recA; recombination protein RecA D Thein_0745 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Thein_0746 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Thein_0744 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Thein_0365 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Thein_1894 Glycosyltransferase 28 domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Thein_0841 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Thein_0618 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thein_0879 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Thein_1232 recombination protein RecR K06187 recR; recombination protein RecR D Thein_1515 Sigma 54 interacting domain protein K03631 recN; DNA repair protein RecN (Recombination protein N) D Thein_0232 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Thein_1351 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Thein_1425 Ku protein K10979 ku; DNA end-binding protein Ku D Thein_1426 DNA polymerase LigD, ligase domain protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D Thein_1227 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Thein_1004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Thein_1586 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Thein_1725 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Thein_1598 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Thein_0541 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha D Thein_1111 PHP domain protein K02347 polX; DNA polymerase (family X) D Thein_0359 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Thein_0208 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:tid03029] D Thein_0667 Cytochrome b/b6 domain protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Thein_0211 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Thein_1593 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Thein_2094 translation elongation factor Ts K02357 tsf; elongation factor Ts D Thein_1461 translation elongation factor Tu K02358 tuf; elongation factor Tu D Thein_0281 translation elongation factor Tu K02358 tuf; elongation factor Tu D Thein_1526 small GTP-binding protein K02355 fusA; elongation factor G D Thein_1388 translation elongation factor G K02355 fusA; elongation factor G D Thein_1460 translation elongation factor G K02355 fusA; elongation factor G D Thein_0987 GTP-binding protein Era K03595 era; GTPase D Thein_1915 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thein_1827 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thein_0591 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thein_0809 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thein_0522 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Thein_1320 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Thein_0523 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Thein_1686 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_1950 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Thein_0603 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Thein_1205 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thein_1204 GrpE protein K03687 GRPE; molecular chaperone GrpE D Thein_1385 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thein_1384 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Thein_0009 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Thein_1535 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Thein_0346 heat shock protein DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ D Thein_0876 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thein_0629 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Thein_0102 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning D Thein_0632 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thein_1187 GCN5-related N-acetyltransferase K17972 NAA20; N-terminal acetyltransferase B complex catalytic subunit [EC:2.3.1.254] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tid02000] D Thein_0693 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Thein_0489 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Thein_0487 NifC-like ABC-type porter K02018 modB; molybdate transport system permease protein D Thein_0486 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Thein_1647 binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein D Thein_1646 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Thein_0317 ABC transporter, periplasmic substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D Thein_0318 binding-protein-dependent transport systems inner membrane component K05773 tupB; tungstate transport system permease protein D Thein_0319 ABC transporter related protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D Thein_2161 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein D Thein_2158 binding-protein-dependent transport systems inner membrane component K11070 potC; spermidine/putrescine transport system permease protein D Thein_2159 binding-protein-dependent transport systems inner membrane component K11071 potB; spermidine/putrescine transport system permease protein D Thein_2160 ABC transporter related protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D Thein_0675 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D Thein_0676 binding-protein-dependent transport systems inner membrane component K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D Thein_0677 binding-protein-dependent transport systems inner membrane component K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D Thein_0674 ABC transporter related protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D Thein_0477 Conserved hypothetical protein CHP00245 K02069 STAR2; UDP-glucose/iron transport system permease protein D Thein_0476 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Thein_1178 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Thein_1180 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Thein_1179 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Thein_0665 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thein_2178 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thein_1293 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Thein_1292 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Thein_1291 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Thein_0559 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1860 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1861 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_0251 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1309 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Thein_1857 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_0250 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_1079 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Thein_0249 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Thein_1856 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Thein_1160 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_2084 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_1859 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Thein_1858 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Thein_2085 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Thein_1141 urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein D Thein_1142 urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein D Thein_1143 urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein D Thein_1144 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Thein_1145 urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D Thein_0542 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Thein_0385 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Thein_0544 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Thein_0543 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Thein_0384 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein D Thein_0545 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Thein_0383 ABC transporter related protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D Thein_1661 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thein_0508 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thein_0985 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thein_1660 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thein_0118 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thein_0984 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thein_1659 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thein_0983 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thein_0119 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thein_0784 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thein_1658 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thein_0982 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thein_0981 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein D Thein_0502 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Thein_0503 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Thein_0504 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Thein_1902 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Thein_1900 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Thein_1901 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D Thein_0125 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein D Thein_1863 ABC-3 protein K09816 znuB; zinc transport system permease protein D Thein_1864 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Thein_1010 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Thein_1008 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Thein_1011 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Thein_1296 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein D Thein_1007 Nickel transport complex, NikM subunit, transmembrane K10094 cbiK; nickel transport protein D Thein_1009 hypothetical protein K16915 cbiL; nickel transport protein D Thein_2001 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D Thein_2002 Sigma 54 interacting domain protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Thein_0698 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein D Thein_0699 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein D Thein_1401 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Thein_0605 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Thein_0604 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Thein_2145 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Thein_2144 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Thein_1372 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Thein_1653 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Thein_1371 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Thein_1652 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Thein_1246 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Thein_0023 major facilitator superfamily MFS_1 K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein D Thein_0850 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D Thein_1684 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Thein_1175 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Thein_1174 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D Thein_1406 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Thein_1404 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Thein_0048 TrkA-N domain protein K10716 kch; voltage-gated potassium channel D Thein_1496 ammonium transporter K03320 amt; ammonium transporter, Amt family D Thein_0202 ammonium transporter K03320 amt; ammonium transporter, Amt family D Thein_0599 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D Thein_1132 MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D Thein_0312 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Thein_0311 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Thein_1996 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Thein_1995 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Thein_1287 MotA/TolQ/ExbB proton channel K03562 tolQ; biopolymer transport protein TolQ D Thein_0368 protein TolR K03560 tolR; biopolymer transport protein TolR D Thein_0648 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter D Thein_0567 CrcB protein K06199 crcB; fluoride exporter D Thein_0903 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thein_0904 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thein_1724 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Thein_2009 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D Thein_0003 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Thein_0575 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_1708 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Thein_1224 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Thein_0603 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family D Thein_1151 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD D Thein_1400 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D Thein_0806 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Thein_0696 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein D Thein_1826 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF D Thein_1215 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Thein_2137 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter D Thein_1042 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter D Thein_1133 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D Thein_1540 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter D Thein_0975 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter D Thein_0933 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein D Thein_1981 cation transporter K03498 trkH; trk/ktr system potassium uptake protein D Thein_0932 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Thein_1982 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Thein_1891 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Thein_1769 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Thein_1768 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D Thein_0550 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Thein_0548 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein D Thein_0093 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Thein_0602 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Thein_0958 Lysine exporter protein (LYSE/YGGA) K05835 rhtC; threonine efflux protein D Thein_1236 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Thein_1235 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Thein_2209 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Thein_1994 TonB family protein K03832 tonB; periplasmic protein TonB D Thein_0089 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D Thein_0369 TonB family protein K03646 tolA; colicin import membrane protein D Thein_0370 TolB domain-containing protein K03641 tolB; TolB protein D Thein_1622 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D Thein_0849 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system D Thein_1220 putative exopolysaccharide biosynthesis protein (protein-tyrosine kinase) K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Thein_1222 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily K25590 epsF; protein tyrosine kinase modulator D Thein_0354 FeoA family protein K04758 feoA; ferrous iron transport protein A D Thein_2226 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Thein_0073 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:tid02044] D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_1221 AAA ATPase K02450 gspA; general secretion pathway protein A D Thein_1885 AAA ATPase K02450 gspA; general secretion pathway protein A D Thein_2133 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Thein_2124 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Thein_2126 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F D Thein_2125 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Thein_1264 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Thein_0204 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Thein_0205 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Thein_1887 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Thein_0149 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Thein_1886 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Thein_0515 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM D Thein_0514 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Thein_0513 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D Thein_0512 hypothetical protein K02665 pilP; type IV pilus assembly protein PilP D Thein_0511 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Thein_2142 twitching motility protein K02669 pilT; twitching motility protein PilT D Thein_2143 twitching motility protein K02669 pilT; twitching motility protein PilT D Thein_1303 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Thein_1881 type II and III secretion system protein K12282 mshL; MSHA biogenesis protein MshL D Thein_1772 protein of unknown function YGGT K02221 yggT; YggT family protein D Thein_0715 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA D Thein_0382 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12] D Thein_0166 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Thein_0187 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Thein_0186 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Thein_1701 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein D Thein_1812 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Thein_1814 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Thein_1815 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Thein_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thein_0182 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D Thein_0183 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Thein_0184 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Thein_0185 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Thein_1942 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D Thein_1937 hypothetical protein K12057 traF; conjugal transfer pilus assembly protein TraF D Thein_1958 hypothetical protein K12058 traN; conjugal transfer mating pair stabilization protein TraN D Thein_1954 TraU family protein K12060 traU; conjugal transfer pilus assembly protein TraU D Thein_1936 Peptidase S26, conserved region K12062 trbI; conjugal transfer pilin signal peptidase TrbI D Thein_1960 sex pilus assembly protein K12063 traC; conjugal transfer ATP-binding protein TraC D Thein_1934 hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV D Thein_1933 pilus assembly protein K12065 traB; conjugal transfer pilus assembly protein TraB D Thein_1932 hypothetical protein K12066 traK; conjugal transfer pilus assembly protein TraK D Thein_1931 sex pilus assembly/synthesis protein K12067 traE; conjugal transfer pilus assembly protein TraE D Thein_1967 hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD D Thein_0853 disulfide bond isomerase, DsbC/G K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Thein_1928 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Thein_1941 TraH family protein K12072 traH; conjugative transfer pilus assembly protein TraH D Thein_1286 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thein_0169 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein D Thein_0279 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thein_1413 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D Thein_1483 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Thein_1240 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thein_1368 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thein_0822 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D Thein_0632 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thein_1588 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Thein_0480 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Thein_1248 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB D Thein_0481 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Thein_2051 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC D Thein_1249 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tid02042] D Thein_0903 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thein_0904 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:tid02022] D Thein_0395 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Thein_0396 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Thein_2220 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Thein_2219 integral membrane sensor signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Thein_1670 response regulator receiver protein K02483 K02483; two-component system, OmpR family, response regulator D Thein_0014 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F D Thein_1163 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Thein_1162 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Thein_1130 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Thein_0671 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Thein_0483 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thein_0484 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Thein_0005 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_1131 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_2063 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_0323 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Thein_0347 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thein_0350 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0191 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0349 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thein_1194 PAS/PAC sensor hybrid histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] D Thein_0079 response regulator receiver protein K13589 cpdR; two-component system, cell cycle response regulator CpdR D Thein_1061 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thein_1380 integral membrane sensor hybrid histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thein_1452 response regulator receiver and ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:tid02035] D Thein_0347 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thein_0345 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Thein_1644 chemotaxis protein, CheX K03409 cheX; chemotaxis protein CheX D Thein_1893 CheC-like protein K03409 cheX; chemotaxis protein CheX D Thein_1699 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thein_0348 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thein_0349 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thein_0350 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0191 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thein_0100 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_1663 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_2166 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_0315 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Thein_2061 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein D Thein_1814 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH D Thein_1815 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Thein_1816 hypothetical protein K02413 fliJ; flagellar protein FliJ D Thein_0182 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D Thein_0183 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Thein_0184 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Thein_0185 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Thein_0187 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Thein_0186 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Thein_1813 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Thein_0180 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Thein_0181 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thein_1812 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D Thein_0462 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Thein_0464 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Thein_0463 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Thein_0179 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Thein_1811 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Thein_2099 Flagellar hook-length control protein-like, C-terminal domain protein K02414 fliK; flagellar hook-length control protein FliK D Thein_1809 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Thein_1810 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Thein_2098 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Thein_0466 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D Thein_0465 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Thein_0461 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Thein_2096 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Thein_2097 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Thein_0458 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Thein_0457 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Thein_0451 flagellin domain protein K02406 fliC; flagellin D Thein_0454 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2 D Thein_0453 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Thein_0190 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Thein_0312 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Thein_0311 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB D Thein_0455 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW D Thein_0688 Anti-sigma-28 factor FlgM family protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Thein_1581 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Thein_0188 GTP-binding signal recognition particle SRP54 G-domain protein K02404 flhF; flagellar biosynthesis protein FlhF D Thein_0189 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D Thein_0270 flagellar synthesis regulator FleN, putative K04562 flhG; flagellar biosynthesis protein FlhG D Thein_0484 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR D Thein_0483 multi-sensor signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thein_2142 twitching motility protein K02669 pilT; twitching motility protein PilT D Thein_2143 twitching motility protein K02669 pilT; twitching motility protein PilT D Thein_0204 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Thein_0205 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D Thein_1887 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB D Thein_0149 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Thein_1886 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC D Thein_1264 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Thein_0511 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D Thein_0512 hypothetical protein K02665 pilP; type IV pilus assembly protein PilP D Thein_0513 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D Thein_0514 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN D Thein_0515 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM D Thein_1303 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tid04812] D Thein_0803 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Thein_1323 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Thein_1324 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Thein_0429 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Thein_0430 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Thein_0978 cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Thein_0639 ParA protein K03496 parA; chromosome partitioning protein D Thein_0802 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0069 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thein_0977 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tid04147] D Thein_2170 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thein_1408 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1410 Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thein_1411 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Thein_1385 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thein_1205 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thein_0049 phosphoglucose isomerase (PGI) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thein_0148 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Thein_1461 translation elongation factor Tu K02358 tuf; elongation factor Tu D Thein_0281 translation elongation factor Tu K02358 tuf; elongation factor Tu D Thein_0245 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Thein_1636 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thein_2201 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Thein_1484 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Thein_1367 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Thein_1300 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Thein_0557 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Thein_2196 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thein_1683 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Thein_0065 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_1762 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_0855 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thein_0658 Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Thein_0373 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Thein_1412 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tid02048] D Thein_0232 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Thein_1351 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D Thein_0233 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Thein_1349 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Thein_1352 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Thein_0229 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Thein_0227 CRISPR-associated autoregulator, DevR family K19075 cst2; CRISPR-associated protein Cst2 D Thein_0231 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Thein_0216 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D Thein_0228 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h D Thein_1347 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1 D Thein_0217 CRISPR-associated RAMP protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1 D Thein_1346 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2 D Thein_0218 protein of unknown function DUF324 K19076 cmr2; CRISPR-associated protein Cmr2 D Thein_1345 CRISPR-associated protein, Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3 D Thein_1342 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4 D Thein_0222 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4 D Thein_1341 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5 D Thein_1340 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6 D Thein_1571 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Thein_1574 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Thein_1578 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Thein_1225 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D Thein_1939 ribbon-helix-helix protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI D Thein_0506 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D Thein_0705 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D Thein_1665 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D Thein_0022 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D Thein_1761 plasmid stabilization system K07334 higB-1; toxin HigB-1 D Thein_0429 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Thein_1324 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Thein_1322 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thein_0876 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:tid04090] C 01504 Antimicrobial resistance genes [BR:tid01504] D Thein_2219 integral membrane sensor signal transduction histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3] D Thein_1708 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system D Thein_0137 outer membrane efflux protein K12340 tolC; outer membrane protein D Thein_0851 outer membrane efflux protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tid00537] D Thein_0065 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Thein_1762 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tid03100] D Thein_R0011 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0014 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0057 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thein_R0028 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0048 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0027 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thein_R0031 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Thein_R0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Thein_R0024 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Thein_R0041 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thein_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thein_R0058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thein_R0016 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thein_R0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thein_R0003 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thein_R0036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thein_R0040 tRNA-His K14226 tRNA-His; tRNA His D Thein_R0012 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thein_R0020 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thein_R0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0056 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0049 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thein_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thein_R0059 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thein_R0001 tRNA-Met K14230 tRNA-Met; tRNA Met D Thein_R0025 tRNA-Met K14230 tRNA-Met; tRNA Met D Thein_R0033 tRNA-Met K14230 tRNA-Met; tRNA Met D Thein_R0038 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Thein_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thein_R0032 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thein_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thein_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thein_R0050 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thein_R0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thein_R0046 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thein_R0005 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Thein_R0008 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Thein_R0042 tRNA-Val K14237 tRNA-Val; tRNA Val D Thein_R0022 tRNA-Val K14237 tRNA-Val; tRNA Val D Thein_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val D Thein_R0055 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Thein_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thein_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thein_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thein_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thein_R0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thein_R0017 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thein_R0054 RNA component of signal recognition particle K01983 ffs; SRP RNA D Thein_R0047 RNA component of RNaseP K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Thein_0095 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Thein_0094 Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Thein_0498 Ferredoxin hydrogenase K00533 E1.12.7.2L; ferredoxin hydrogenase large subunit [EC:1.12.7.2] D Thein_0497 iron hydrogenase small subunit K00534 E1.12.7.2S; ferredoxin hydrogenase small subunit [EC:1.12.7.2] D Thein_2055 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D Thein_0993 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2] D Thein_1181 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Thein_0615 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Thein_1238 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Thein_1913 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Thein_0892 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Thein_2035 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Thein_1148 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Thein_0824 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Thein_1261 rRNA (guanine-N(2)-)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-] D Thein_0695 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Thein_0488 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Thein_2228 protein of unknown function DUF43 K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D Thein_0045 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Thein_2138 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Thein_1075 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Thein_1027 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Thein_0076 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Thein_1534 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Thein_0039 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Thein_1064 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Thein_0343 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Thein_0366 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Thein_0928 nuclease (SNase domain-containing protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Thein_0248 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Thein_1082 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D Thein_1259 ATPase associated with various cellular activities AAA_5 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Thein_2162 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Thein_1837 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Thein_0053 protein of unknown function UPF0031 K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Thein_1354 asparagine synthase K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Thein_0663 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Thein_0909 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D Thein_0267 cytoplasmic peptidoglycan synthetase domain protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Thein_0778 RNA 3'-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D Thein_0777 ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] D Thein_1607 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] D Thein_1920 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D Thein_1680 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D Thein_0764 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB D Thein_1356 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D Thein_2029 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein D Thein_1052 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB D Thein_0284 FAD dependent oxidoreductase K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA D Thein_0283 methyl-viologen-reducing hydrogenase delta subunit K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB D Thein_0282 heterodisulfide reductase, subunit E (HdrE) K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC D Thein_2222 hypothetical protein K02573 napG; ferredoxin-type protein NapG D Thein_2221 periplasmic nitrate reductase NapH K02574 napH; ferredoxin-type protein NapH D Thein_0843 hypothetical protein K02574 napH; ferredoxin-type protein NapH D Thein_1693 4Fe-4S ferredoxin iron-sulfur binding domain protein K02574 napH; ferredoxin-type protein NapH D Thein_0372 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Thein_0893 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Thein_1638 alanine racemase domain protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Thein_2152 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D Thein_1083 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D Thein_1189 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D Thein_2019 GCN5-related N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Thein_0995 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein D Thein_1050 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1 D Thein_1051 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2 D Thein_0086 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D Thein_1262 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Thein_0862 trigger factor K03545 tig; trigger factor D Thein_R0030 SsrA-binding protein K03664 smpB; SsrA-binding protein D Thein_0292 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Thein_2010 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Thein_1914 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Thein_0295 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Thein_1282 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein D Thein_1589 cytochrome c-type forming protein Ccs1 K07399 resB; cytochrome c biogenesis protein D Thein_0616 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D Thein_1910 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Thein_1916 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Thein_1135 HhH-GPD family protein K07457 K07457; endonuclease III related protein D Thein_0643 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease D Thein_1747 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease D Thein_1585 DNA protecting protein DprA K04096 smf; DNA processing protein D Thein_1493 AAA ATPase central domain protein K07478 ycaJ; putative ATPase D Thein_1649 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Thein_1118 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Thein_1127 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Thein_0357 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Thein_1275 transposase IS4 family protein K07481 K07481; transposase, IS5 family D Thein_0234 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0082 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0099 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0426 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0679 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0717 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0781 hypothetical protein K07486 K07486; transposase D Thein_0857 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_0911 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_1749 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_1764 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_2175 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase D Thein_2233 hypothetical protein K07486 K07486; transposase D Thein_0215 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0020 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0041 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1107 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0475 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0585 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1436 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0941 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1390 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1453 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1613 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1678 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_1991 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0305 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_2049 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0163 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0171 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D Thein_0964 transposase mutator type K07493 K07493; putative transposase C 99979 Viral proteins C 99998 Others D Thein_1233 Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth D Thein_0761 cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Thein_0301 cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Thein_0631 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein D Thein_0447 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF D Thein_2146 Peptidase M23 K22719 envC; murein hydrolase activator C 99993 Cell motility D Thein_0408 gliding motility protein (MglA) K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D Thein_1770 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D Thein_0792 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Thein_0090 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Thein_1017 AsmA family protein K07289 asmA; AsmA protein D Thein_0880 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Thein_1290 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Thein_2232 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Thein_1321 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Thein_2074 hemerythrin-like metal-binding protein K07216 hr; hemerythrin D Thein_0926 methyl-accepting chemotaxis sensory transducer K07216 hr; hemerythrin D Thein_0637 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Thein_0316 DNA binding domain protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein B B 09194 Poorly characterized C 99996 General function prediction only D Thein_0775 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Thein_1021 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily D Thein_2106 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily D Thein_1245 SufBD protein K09014 sufB; Fe-S cluster assembly protein SufB D Thein_0510 ribonuclease BN K07058 K07058; membrane protein D Thein_0808 Sporulation domain-containing protein K03749 dedD; DedD protein C 99997 Function unknown D Thein_0352 DRTGG domain protein K06873 K06873; uncharacterized protein D Thein_0655 hypothetical protein K06889 K06889; uncharacterized protein D Thein_0741 AAA ATPase K06921 K06921; uncharacterized protein D Thein_1730 CoA-binding domain protein K06929 K06929; uncharacterized protein D Thein_0427 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Thein_1012 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Thein_2199 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Thein_1716 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Thein_0757 YHS domain-containing protein K06950 K06950; uncharacterized protein D Thein_0263 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Thein_1242 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein D Thein_0976 protein of unknown function DUF901 K06962 K06962; uncharacterized protein D Thein_1542 patched family protein K07003 K07003; uncharacterized protein D Thein_2203 hypothetical protein K07022 K07022; uncharacterized protein D Thein_2104 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein D Thein_1938 PilT protein domain protein K07063 K07063; uncharacterized protein D Thein_1968 PilT protein domain protein K07064 K07064; uncharacterized protein D Thein_0889 NAD-dependent epimerase/dehydratase K07071 K07071; uncharacterized protein D Thein_0662 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Thein_1437 permease K07089 K07089; uncharacterized protein D Thein_0063 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_1620 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_1302 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_0326 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_0328 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_2067 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_0236 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Thein_0529 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Thein_0056 hypothetical protein K07112 K07112; uncharacterized protein D Thein_0625 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein D Thein_0718 hypothetical protein K07133 K07133; uncharacterized protein D Thein_1338 hypothetical ATPase K07133 K07133; uncharacterized protein D Thein_1348 putative GTP-binding protein K07133 K07133; uncharacterized protein D Thein_1294 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K07138 K07138; uncharacterized protein D Thein_1612 conserved hypothetical protein K07139 K07139; uncharacterized protein D Thein_0032 protein of unknown function DUF164 K07164 K07164; uncharacterized protein D Thein_0633 protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Thein_0936 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Thein_1547 protein of unknown function DUF763 K09003 K09003; uncharacterized protein D Thein_0103 hypothetical protein K09004 K09004; uncharacterized protein D Thein_0800 protein of unknown function DUF505 K09010 K09010; uncharacterized protein D Thein_1192 protein of unknown function DUF505 K09010 K09010; uncharacterized protein D Thein_1616 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein D Thein_1295 protein of unknown function DUF82 K09122 K09122; uncharacterized protein D Thein_1666 hypothetical protein K09126 K09126; uncharacterized protein D Thein_1774 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Thein_0566 protein of unknown function DUF190 K09137 K09137; uncharacterized protein D Thein_0628 hypothetical protein K09138 K09138; uncharacterized protein D Thein_0852 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Thein_0869 hypothetical protein K09143 K09143; uncharacterized protein D Thein_1396 ApbE family lipoprotein K09740 K09740; uncharacterized protein D Thein_0565 cyclic nucleotide-binding protein K09749 K09749; uncharacterized protein D Thein_0210 protein of unknown function DUF503 K09764 K09764; uncharacterized protein D Thein_0133 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Thein_2148 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein D Thein_1230 protein of unknown function DUF329 K09862 K09862; uncharacterized protein D Thein_1028 hypothetical protein K07502 yprB; uncharacterized protein D Thein_0212 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024