+D GENES KO
#
KEGG Orthology (KO) - Thioalkalivibrio sp. K90mix
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tkm00010]
D TK90_1981 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TK90_2119 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TK90_0085 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0054 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0084 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_2386 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TK90_0706 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TK90_2389 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TK90_2388 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TK90_0133 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TK90_1470 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TK90_2387 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_1642 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_2428 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TK90_0351 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TK90_0352 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tkm00020]
D TK90_0995 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D TK90_1268 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TK90_1264 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TK90_0097 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TK90_0098 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_2039 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TK90_2040 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TK90_1878 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TK90_1877 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TK90_1880 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TK90_1879 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TK90_1272 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TK90_1605 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TK90_1606 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TK90_0351 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TK90_0352 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tkm00030]
D TK90_2119 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TK90_2364 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TK90_2390 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TK90_0548 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_0345 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_2386 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TK90_0084 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TK90_0085 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0054 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tkm00040]
D TK90_1572 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TK90_1219 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TK90_2364 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TK90_1579 Carbohydrate kinase, FGGY-like protein K22935 XK1; D-ribulokinase [EC:2.7.1.47]
D TK90_1224 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:tkm00051]
D TK90_0033 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_1094 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TK90_1224 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D TK90_0085 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0054 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0084 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TK90_0283 PfkB domain protein K00846 KHK; ketohexokinase [EC:2.7.1.3]
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_2386 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TK90_0706 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TK90_0375 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:tkm00052]
D TK90_2493 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TK90_0389 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TK90_1219 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_1981 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TK90_0085 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0054 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:tkm00053]
D TK90_1572 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TK90_0618 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TK90_1835 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:tkm00500]
D TK90_2312 sucrose-phosphate synthase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14]
D TK90_1219 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TK90_1529 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D TK90_2120 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D TK90_1530 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TK90_0176 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D TK90_1527 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_1981 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TK90_2119 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TK90_0033 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tkm00520]
D TK90_1243 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TK90_0033 PfkB domain protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D TK90_2584 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TK90_0705 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D TK90_2585 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TK90_0404 protein of unknown function UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D TK90_1508 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D TK90_2299 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D TK90_2300 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D TK90_0381 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TK90_2199 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TK90_2542 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TK90_2543 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TK90_1550 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TK90_0611 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TK90_1981 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_1219 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TK90_1572 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TK90_2493 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TK90_0389 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TK90_0618 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TK90_1835 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TK90_0375 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TK90_2119 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TK90_1094 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TK90_0010 ferredoxin K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D TK90_1529 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tkm00620]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TK90_0351 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TK90_0352 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_2387 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_1642 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_1479 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TK90_2242 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TK90_2243 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TK90_1332 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TK90_0560 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D TK90_0079 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D TK90_1047 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D TK90_0536 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TK90_0757 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TK90_2378 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TK90_1605 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TK90_1606 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TK90_1272 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TK90_2121 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TK90_2428 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TK90_1708 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tkm00630]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TK90_0995 citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D TK90_1268 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TK90_0997 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D TK90_1893 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D TK90_2310 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TK90_1894 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D TK90_0895 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TK90_2363 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TK90_1192 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TK90_0858 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D TK90_0859 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D TK90_1895 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TK90_2577 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TK90_1887 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TK90_1718 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TK90_1716 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TK90_1720 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0638 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_1719 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TK90_1746 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_0640 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_0693 6-phosphogluconate dehydrogenase NAD-binding protein K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D TK90_1595 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TK90_2552 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tkm00640]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_1379 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D TK90_1479 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TK90_2242 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TK90_2243 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TK90_1332 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TK90_2040 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TK90_2039 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:tkm00650]
D TK90_1878 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TK90_1877 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TK90_1880 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TK90_1879 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TK90_2453 Aldehyde Dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D TK90_1782 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_0036 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_1781 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TK90_2325 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:tkm00660]
D TK90_1782 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_0036 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_1781 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TK90_2325 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D TK90_2040 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TK90_2039 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TK90_1343 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TK90_1342 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TK90_1341 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tkm00562]
D TK90_2342 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TK90_0826 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TK90_0706 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tkm00190]
D TK90_0708 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D TK90_0709 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D TK90_0710 NADH (or F420H2) dehydrogenase, subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D TK90_0711 NADH dehydrogenase I, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TK90_0712 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TK90_0713 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TK90_0714 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D TK90_0715 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TK90_0716 NADH-quinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D TK90_0717 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D TK90_0718 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D TK90_0719 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D TK90_0720 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D TK90_0721 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D TK90_1878 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TK90_1877 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TK90_1880 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TK90_1879 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TK90_2219 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TK90_0892 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TK90_2218 Cytochrome b/b6 domain protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TK90_2217 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D TK90_0187 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D TK90_0186 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D TK90_0158 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TK90_0159 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TK90_0161 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TK90_2589 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TK90_2587 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TK90_2588 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TK90_2590 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TK90_2586 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TK90_2593 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TK90_2591 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TK90_2592 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TK90_1975 Inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D TK90_0944 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tkm00710]
D TK90_0858 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D TK90_0859 Ribulose-bisphosphate carboxylase K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D TK90_2388 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TK90_2389 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_2386 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TK90_0084 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TK90_2390 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TK90_0548 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D TK90_2566 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D TK90_0706 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TK90_2364 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TK90_2121 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TK90_2378 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:tkm00720]
D TK90_2428 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TK90_2121 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TK90_1605 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D TK90_1606 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TK90_1272 fumarate lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TK90_1878 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TK90_1877 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TK90_1880 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TK90_1879 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D TK90_2039 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TK90_2040 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TK90_1264 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TK90_1268 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TK90_1479 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TK90_2242 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TK90_2243 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TK90_1332 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TK90_0603 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TK90_2393 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tkm00680]
D TK90_1887 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TK90_1895 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TK90_0895 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TK90_1470 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TK90_2121 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_2386 fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TK90_0084 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TK90_0085 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_0054 phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D TK90_1518 Glutamate synthase (NADPH) K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D TK90_0634 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TK90_0633 protein of unknown function DUF224 cysteine-rich region domain protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TK90_0637 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TK90_0632 iron-sulfur cluster-binding protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TK90_0636 iron-sulfur cluster-binding protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TK90_2428 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D TK90_0133 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TK90_1206 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TK90_1205 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:tkm00910]
D TK90_0964 putative nitrate transporter component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TK90_0665 nitrate-binding protein NrtA precursor, periplasmic K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TK90_0963 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D TK90_0666 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D TK90_0667 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TK90_0962 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TK90_0670 molybdopterin oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D TK90_0668 nitrite reductase (NAD(P)H), large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D TK90_0669 nitrite reductase (NAD(P)H), small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D TK90_1652 blue (type 1) copper domain protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D TK90_2577 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TK90_0265 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TK90_0271 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TK90_0961 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D TK90_1784 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:tkm00920]
D TK90_0062 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TK90_2417 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D TK90_0065 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D TK90_0064 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D TK90_0059 molybdopterin oxidoreductase Fe4S4 region K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D TK90_0144 Nitrate reductase K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D TK90_0058 4Fe-4S ferredoxin iron-sulfur binding domain protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D TK90_0145 4Fe-4S ferredoxin iron-sulfur binding domain protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D TK90_0057 DMSO reductase anchor subunit (DmsC) K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D TK90_0432 hypothetical protein K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TK90_0433 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TK90_0434 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D TK90_0123 transmembrane proetin, twin-arginine translocation pathway signal K17226 soxY; sulfur-oxidizing protein SoxY
D TK90_0124 Sulphur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D TK90_0627 5'-Nucleotidase domain protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D TK90_1150 5'-Nucleotidase domain protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D TK90_0236 Flavocytochrome c sulphide dehydrogenase flavin-binding protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D TK90_0237 cytochrome c, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D TK90_0828 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TK90_2461 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TK90_1929 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tkm00061]
D TK90_1479 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TK90_2242 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TK90_2243 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TK90_1332 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D TK90_1258 acyl carrier protein K02078 acpP; acyl carrier protein
D TK90_0482 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D TK90_2521 conserved hypothetical protein K02078 acpP; acyl carrier protein
D TK90_1260 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TK90_1601 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TK90_0475 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D TK90_1257 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TK90_1259 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0472 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0744 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D TK90_1486 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TK90_0479 acyl carrier protein dehydratase-like protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TK90_0598 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TK90_0673 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tkm00071]
D TK90_0673 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TK90_0972 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tkm00561]
D TK90_1595 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TK90_1465 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TK90_1602 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TK90_0155 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TK90_2573 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TK90_2802 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:tkm00564]
D TK90_2026 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TK90_0419 protein of unknown function DUF224 cysteine-rich region domain protein K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D TK90_0155 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TK90_2573 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TK90_2802 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TK90_0730 Phosphatidylethanolamine N-methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D TK90_1492 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TK90_1778 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TK90_1846 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TK90_1779 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TK90_1597 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D TK90_1678 Phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D TK90_1009 HAD-superfamily subfamily IB hydrolase, TIGR01490 K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D TK90_0906 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TK90_1928 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TK90_0531 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D TK90_1146 phospholipase D/Transphosphatidylase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D TK90_0643 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D TK90_1068 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TK90_2112 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tkm00230]
D TK90_2418 NUDIX hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_0345 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TK90_1328 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TK90_0177 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TK90_0552 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TK90_1153 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D TK90_0553 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TK90_2368 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D TK90_2369 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TK90_2383 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TK90_1273 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TK90_0178 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TK90_1288 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TK90_2420 Haloacid dehalogenase domain protein hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D TK90_2033 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TK90_1245 phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D TK90_1913 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TK90_0731 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TK90_2473 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TK90_1912 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TK90_2003 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D TK90_1442 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TK90_0256 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TK90_1441 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TK90_0267 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D TK90_2001 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TK90_0943 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TK90_1052 (p)ppGpp synthetase I, SpoT/RelA K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D TK90_2343 adenylate/guanylate cyclase with integral membrane sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TK90_1600 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D TK90_1939 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TK90_2067 Adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D TK90_1370 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D TK90_1976 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TK90_0055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TK90_1959 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TK90_2298 Calcineurin phosphoesterase domain protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D TK90_1983 bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D TK90_0062 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TK90_1784 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:tkm00240]
D TK90_0699 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TK90_0698 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TK90_2409 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TK90_0031 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TK90_2410 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TK90_1057 dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TK90_0051 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D TK90_2411 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D TK90_0071 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TK90_1217 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TK90_1495 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TK90_0731 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TK90_1959 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TK90_2125 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TK90_1472 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TK90_1211 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TK90_2491 NUDIX hydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D TK90_1288 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TK90_2408 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TK90_0907 CMP/dCMP deaminase zinc-binding protein K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D TK90_1785 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D TK90_1442 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TK90_0256 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TK90_1441 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TK90_1253 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D TK90_2717 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TK90_2260 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TK90_1904 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TK90_0027 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tkm00250]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1957 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TK90_1369 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TK90_2515 exosortase 1 system-associated amidotransferase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_2520 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_1756 asparagine synthase family amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_0032 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_2533 conserved hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_1895 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TK90_0355 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TK90_0015 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TK90_1939 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TK90_1273 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TK90_2409 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TK90_0031 aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TK90_2453 Aldehyde Dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D TK90_0265 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TK90_0271 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D TK90_2577 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TK90_0699 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TK90_0698 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TK90_2584 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TK90_1328 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tkm00260]
D TK90_1613 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TK90_1340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TK90_1281 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TK90_1280 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TK90_1887 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TK90_1895 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TK90_0895 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D TK90_1595 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D TK90_0133 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TK90_1206 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TK90_1205 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TK90_1718 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TK90_1716 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TK90_1720 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0638 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_1719 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TK90_1746 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_0640 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_1778 CDP-diacylglycerol/serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TK90_0179 Methyltransferase type 12 K18896 gsmt; glycine/sarcosine N-methyltransferase [EC:2.1.1.156]
D TK90_0180 Methyltransferase type 11 K18897 sdmt; sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.157]
D TK90_0549 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TK90_1333 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TK90_1334 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TK90_1358 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tkm00270]
D TK90_0828 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TK90_0182 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TK90_2391 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TK90_2355 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TK90_0201 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TK90_2033 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D TK90_1506 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D TK90_1246 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D TK90_1203 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D TK90_1788 methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D TK90_1789 enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D TK90_2746 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TK90_2392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TK90_1613 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TK90_1340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TK90_1281 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TK90_2461 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D TK90_1929 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D TK90_0301 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TK90_2324 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D TK90_2401 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_2377 malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TK90_0588 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D TK90_1206 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TK90_1205 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tkm00280]
D TK90_0301 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0175 6-phosphogluconate dehydrogenase NAD-binding protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tkm00290]
D TK90_0549 threonine dehydratase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TK90_1343 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D TK90_1342 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D TK90_1341 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D TK90_1782 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_0036 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_1781 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TK90_1780 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TK90_1221 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TK90_2292 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TK90_0301 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TK90_1708 pyruvate carboxyltransferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tkm00300]
D TK90_1281 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D TK90_1613 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TK90_1340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TK90_0410 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TK90_1844 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D TK90_1031 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D TK90_0946 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TK90_1032 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D TK90_0119 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TK90_2528 pyridoxal-dependent decarboxylase, exosortase system type 1 associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TK90_0121 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TK90_2206 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TK90_2205 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tkm00310]
D TK90_0098 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_1969 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00220 Arginine biosynthesis [PATH:tkm00220]
D TK90_0945 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D TK90_0355 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TK90_0015 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TK90_2577 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TK90_0699 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TK90_0698 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TK90_1784 Carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_2295 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D TK90_2190 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D TK90_0185 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D TK90_0400 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D TK90_0946 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tkm00330]
D TK90_1081 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D TK90_0907 CMP/dCMP deaminase zinc-binding protein K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D TK90_0202 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D TK90_1196 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D TK90_0201 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TK90_2355 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D TK90_1371 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TK90_2416 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D TK90_2008 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TK90_2129 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D TK90_2581 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TK90_2795 Procollagen-proline dioxygenase K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1969 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:tkm00340]
D TK90_0380 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D TK90_1940 tRNA synthetase class II (G H P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D TK90_0129 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D TK90_0677 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D TK90_0127 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D TK90_0126 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D TK90_0128 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D TK90_0125 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D TK90_1208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0377 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_2248 inositol monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D TK90_0378 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D TK90_0941 methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:tkm00350]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0377 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0504 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
C 00360 Phenylalanine metabolism [PATH:tkm00360]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0377 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0244 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D TK90_1969 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TK90_0504 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D TK90_2075 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D TK90_1371 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TK90_1586 Rieske (2Fe-2S) iron-sulphur domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D TK90_1671 fumarylacetoacetate (FAA) hydrolase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:tkm00380]
D TK90_0098 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_1371 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TK90_2075 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tkm00400]
D TK90_0379 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TK90_0268 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D TK90_2241 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D TK90_2281 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D TK90_0280 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D TK90_1740 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TK90_2362 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TK90_2361 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TK90_2359 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D TK90_1336 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TK90_2358 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D TK90_1333 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TK90_1334 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TK90_1358 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TK90_1207 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D TK90_1209 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0377 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_1054 conserved hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TK90_1999 conserved hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tkm00410]
D TK90_2041 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TK90_2042 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TK90_0027 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism
D TK90_0093 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tkm00450]
D TK90_0182 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TK90_1443 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TK90_0062 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TK90_1787 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tkm00460]
D TK90_0093 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TK90_1369 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TK90_1887 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tkm00470]
D TK90_1930 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TK90_1969 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TK90_2198 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TK90_2203 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TK90_0119 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TK90_2528 pyridoxal-dependent decarboxylase, exosortase system type 1 associated K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TK90_0121 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TK90_0244 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:tkm00480]
D TK90_0093 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TK90_1841 5-oxoprolinase (ATP-hydrolyzing) K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D TK90_2324 glutamate/cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D TK90_2401 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D TK90_1080 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TK90_2115 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TK90_2227 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TK90_2049 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D TK90_1857 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D TK90_1264 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TK90_1318 Peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TK90_1801 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TK90_1856 glutaredoxin-family domain protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D TK90_0201 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:tkm00540]
D TK90_1485 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TK90_2194 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D TK90_1487 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TK90_1918 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TK90_1484 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TK90_0594 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D TK90_0365 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TK90_1471 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TK90_0366 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TK90_0596 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TK90_0323 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TK90_2578 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TK90_0308 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TK90_2264 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TK90_2256 Protein of unknown function DUF2219 K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D TK90_0306 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D TK90_0321 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D TK90_0303 rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D TK90_0322 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D TK90_0304 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D TK90_0320 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D TK90_0318 lipopolysaccharide kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D TK90_0315 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D TK90_0319 glycosyl transferase group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tkm00541]
D TK90_1219 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D TK90_2493 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TK90_0389 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TK90_1572 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TK90_0618 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TK90_1835 NAD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TK90_0010 ferredoxin K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D TK90_1094 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TK90_2585 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D TK90_2542 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TK90_1573 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D TK90_1543 NAD-dependent epimerase/dehydratase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D TK90_2543 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TK90_1550 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TK90_0611 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:tkm00550]
D TK90_0381 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TK90_2199 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TK90_2200 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TK90_2203 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TK90_2206 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TK90_2198 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TK90_2205 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TK90_1493 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TK90_1065 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TK90_1897 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TK90_2204 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TK90_2201 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TK90_0902 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TK90_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TK90_1297 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TK90_1974 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TK90_2207 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TK90_1970 Beta-lactamase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TK90_0467 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:tkm00552]
D TK90_1065 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TK90_1897 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TK90_1573 polysaccharide biosynthesis protein CapD K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tkm00543]
D TK90_0828 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tkm00730]
D TK90_0140 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D TK90_0393 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D TK90_0830 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TK90_1380 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TK90_0415 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TK90_2464 thiazole biosynthesis family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D TK90_0392 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D TK90_1679 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D TK90_1850 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TK90_1976 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TK90_0055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tkm00740]
D TK90_1278 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TK90_1883 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TK90_1885 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TK90_1771 HAD-superfamily hydrolase, subfamily IA, variant 1 K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D TK90_1681 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D TK90_1884 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D TK90_2557 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TK90_1459 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D TK90_0360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tkm00750]
D TK90_1519 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D TK90_1205 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TK90_1979 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D TK90_1944 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D TK90_1280 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tkm00760]
D TK90_1957 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D TK90_0227 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D TK90_1723 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D TK90_1288 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D TK90_2128 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TK90_1959 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TK90_2038 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D TK90_1617 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D TK90_0457 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D TK90_0250 pyridine nucleotide transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D TK90_0251 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D TK90_0249 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D TK90_2453 Aldehyde Dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:tkm00770]
D TK90_1782 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_0036 thiamine pyrophosphate protein TPP binding domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D TK90_1781 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D TK90_1780 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D TK90_1221 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TK90_2292 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D TK90_2043 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D TK90_2042 pantoate/beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TK90_0977 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D TK90_2259 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D TK90_1959 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D TK90_0091 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TK90_2187 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TK90_1943 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D TK90_0301 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TK90_0027 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D TK90_2041 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tkm00780]
D TK90_0157 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D TK90_0475 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D TK90_1257 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TK90_1259 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0472 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_1486 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TK90_0479 acyl carrier protein dehydratase-like protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TK90_0598 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TK90_0156 Carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D TK90_2288 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TK90_1249 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TK90_2384 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D TK90_2286 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D TK90_0976 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tkm00785]
D TK90_1967 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D TK90_1966 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D TK90_0641 Radical SAM domain protein K09711 lipS1; lipoyl synthase
D TK90_0644 Radical SAM domain protein K24689 lipS2; lipoyl synthase
D TK90_0642 Lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0351 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D TK90_0352 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TK90_0097 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TK90_0098 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TK90_1718 Glycine dehydrogenase (decarboxylating) K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D TK90_1716 Glycine dehydrogenase (decarboxylating) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D TK90_1720 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TK90_0638 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_1719 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D TK90_1746 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
D TK90_0640 glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tkm00790]
D TK90_1799 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D TK90_2439 protein of unknown function DUF198 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D TK90_0193 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D TK90_2045 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D TK90_0704 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D TK90_1905 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TK90_1331 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TK90_1278 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TK90_1883 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TK90_1256 Anthranilate synthase K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D TK90_1255 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D TK90_0414 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TK90_1849 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TK90_0868 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TK90_0152 short-chain dehydrogenase/reductase SDR K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D TK90_0569 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TK90_2422 Queuosine synthesis-like protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TK90_0570 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TK90_1578 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TK90_0143 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TK90_2482 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TK90_2480 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TK90_1754 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TK90_2109 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D TK90_2107 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tkm00670]
D TK90_1905 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TK90_0603 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TK90_1887 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TK90_0552 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TK90_0178 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TK90_2272 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TK90_1720 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TK90_0182 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TK90_1904 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TK90_2552 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D TK90_2393 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TK90_0782 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tkm00860]
D TK90_0814 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TK90_0341 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D TK90_0391 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TK90_2280 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TK90_0012 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D TK90_0672 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TK90_0011 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TK90_0272 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D TK90_2279 Coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D TK90_1511 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D TK90_0398 conserved hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D TK90_0253 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D TK90_0671 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D TK90_0797 uroporphyrin-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D TK90_0803 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D TK90_0801 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D TK90_0804 precorrin-3B C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D TK90_0808 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D TK90_0807 putative cobalamin biosynthesis protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D TK90_0805 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D TK90_0798 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D TK90_0806 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D TK90_0802 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D TK90_0796 CobB/CobQ domain protein glutamine amidotransferase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D TK90_0792 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D TK90_2872 ATPase associated with various cellular activities AAA_5 K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D TK90_0791 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TK90_0795 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TK90_1456 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D TK90_1458 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D TK90_1457 L-threonine-O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D TK90_1455 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D TK90_1452 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D TK90_1454 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D TK90_1453 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TK90_2250 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D TK90_0867 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D TK90_0443 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tkm00130]
D TK90_1054 conserved hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TK90_1999 conserved hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45]
D TK90_2283 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D TK90_0008 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D TK90_0360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TK90_1819 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D TK90_1507 ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D TK90_1820 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D TK90_1055 Methyltransferase type 11 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TK90_0103 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TK90_2311 putative ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D TK90_1408 NAD(P)H dehydrogenase (quinone) K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TK90_0558 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D TK90_1505 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tkm00900]
D TK90_0415 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TK90_1491 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TK90_1468 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TK90_0344 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TK90_1467 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TK90_0582 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TK90_2553 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TK90_0360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D TK90_0416 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TK90_2004 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TK90_1493 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tkm00906]
D TK90_1512 squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TK90_2390 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D TK90_1033 beta-lactamase domain protein K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:tkm00332]
D TK90_2008 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D TK90_2129 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tkm00261]
D TK90_0062 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D TK90_1613 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TK90_1340 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TK90_0410 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TK90_1844 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tkm00521]
D TK90_1981 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D TK90_0742 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TK90_1093 Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D TK90_2342 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TK90_0826 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TK90_1981 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:tkm00401]
D TK90_1209 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0377 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D TK90_2362 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TK90_2361 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D TK90_1260 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TK90_1259 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0472 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0598 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D TK90_1258 acyl carrier protein K02078 acpP; acyl carrier protein
D TK90_0482 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D TK90_2521 conserved hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tkm00999]
D TK90_2391 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TK90_2281 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tkm00362]
D TK90_1671 fumarylacetoacetate (FAA) hydrolase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D TK90_0835 ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
C 00627 Aminobenzoate degradation [PATH:tkm00627]
D TK90_1371 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TK90_0560 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D TK90_0360 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:tkm00364]
D TK90_0053 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation
D TK90_2236 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:tkm00361]
D TK90_0053 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D TK90_2236 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:tkm00623]
D TK90_0053 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D TK90_1671 fumarylacetoacetate (FAA) hydrolase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:tkm00633]
D TK90_2094 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:tkm00643]
D TK90_1371 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D TK90_1671 fumarylacetoacetate (FAA) hydrolase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tkm03020]
D TK90_2176 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TK90_2175 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TK90_2144 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TK90_2002 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tkm03010]
D TK90_1212 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TK90_1497 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TK90_2163 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TK90_2145 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TK90_2152 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TK90_1935 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TK90_2173 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TK90_2155 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TK90_0542 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TK90_2170 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TK90_2146 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TK90_2174 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TK90_2147 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TK90_2156 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TK90_0728 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TK90_0427 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TK90_2160 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TK90_1934 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TK90_2165 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TK90_0094 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TK90_0269 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TK90_2179 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TK90_2166 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TK90_2169 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TK90_2168 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D TK90_2157 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TK90_2154 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TK90_2177 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TK90_1932 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TK90_2178 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TK90_2180 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TK90_0541 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TK90_2159 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TK90_2150 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TK90_2162 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TK90_2143 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TK90_2153 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TK90_0430 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TK90_0915 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TK90_2005 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TK90_2164 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TK90_2167 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D TK90_2158 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TK90_0346 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D TK90_2006 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TK90_1995 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TK90_2161 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TK90_2151 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TK90_2381 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TK90_1603 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TK90_1996 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TK90_2603 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TK90_0914 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TK90_2148 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TK90_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TK90_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TK90_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tkm00970]
D TK90_R0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TK90_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TK90_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TK90_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TK90_R0034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TK90_R0016 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TK90_R0041 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TK90_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0003 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0005 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0026 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TK90_R0049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TK90_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TK90_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TK90_R0019 tRNA-His K14226 tRNA-His; tRNA His
D TK90_R0008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TK90_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TK90_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TK90_R0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D TK90_R0002 tRNA-Met K14230 tRNA-Met; tRNA Met
D TK90_R0023 tRNA-Met K14230 tRNA-Met; tRNA Met
D TK90_R0055 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TK90_R0017 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TK90_R0046 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TK90_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TK90_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0048 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TK90_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TK90_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TK90_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TK90_R0050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TK90_R0039 tRNA-Val K14237 tRNA-Val; tRNA Val
D TK90_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D TK90_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D TK90_0814 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TK90_1916 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TK90_0332 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TK90_0333 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TK90_0331 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TK90_1614 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TK90_0514 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TK90_2575 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TK90_2574 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TK90_0912 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TK90_0886 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TK90_0676 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TK90_1787 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TK90_2272 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TK90_0484 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TK90_2132 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TK90_2556 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TK90_0983 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TK90_0247 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TK90_0503 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TK90_0735 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TK90_0916 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TK90_0917 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TK90_0405 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TK90_1726 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tkm03060]
D TK90_2149 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TK90_2182 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TK90_0707 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TK90_1303 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TK90_1302 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TK90_1304 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TK90_2600 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TK90_2191 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TK90_2025 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D TK90_0426 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TK90_R0044 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D TK90_0170 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TK90_0130 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D TK90_0131 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D TK90_0132 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D TK90_1949 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TK90_2555 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tkm04122]
D TK90_0830 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TK90_0631 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D TK90_1266 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TK90_2480 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TK90_0143 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TK90_2481 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D TK90_0336 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D TK90_2482 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TK90_1754 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D TK90_1380 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TK90_2465 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:tkm03018]
D TK90_0396 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D TK90_1190 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D TK90_2467 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D TK90_1470 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TK90_0729 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TK90_1028 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TK90_1938 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TK90_1046 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TK90_0839 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TK90_2469 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TK90_0460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TK90_0292 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TK90_0496 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TK90_0944 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TK90_2046 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tkm03030]
D TK90_1867 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_0501 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_1480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TK90_1855 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TK90_1252 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TK90_2130 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TK90_2116 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TK90_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TK90_1931 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TK90_1232 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TK90_0264 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TK90_2605 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2780 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2885 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_0500 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TK90_1481 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TK90_0044 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TK90_2695 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_1575 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tkm03410]
D TK90_1735 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TK90_2484 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TK90_2000 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TK90_2263 DNA-(apurinic or apyrimidinic site) lyase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D TK90_1599 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TK90_1777 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TK90_2660 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TK90_0007 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TK90_0070 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TK90_0044 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TK90_2811 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TK90_2695 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_1575 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tkm03420]
D TK90_1195 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TK90_2142 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TK90_1242 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TK90_1598 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TK90_0096 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TK90_2706 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TK90_0044 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TK90_2695 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_1575 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tkm03430]
D TK90_1619 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TK90_0784 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D TK90_0494 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TK90_0096 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TK90_2706 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TK90_1915 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TK90_0417 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TK90_2811 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TK90_2605 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2780 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2885 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_1480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TK90_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TK90_1855 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TK90_2130 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TK90_1252 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TK90_1867 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_0501 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_2116 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TK90_2695 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_1575 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_2747 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tkm03440]
D TK90_2811 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TK90_2605 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2780 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2885 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TK90_1945 Recombination protein O RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TK90_1853 recombination protein RecR K06187 recR; recombination protein RecR
D TK90_1616 recA protein K03553 recA; recombination protein RecA
D TK90_0044 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TK90_2016 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TK90_0561 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TK90_2017 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TK90_2010 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TK90_2813 helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TK90_1624 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D TK90_1625 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D TK90_1623 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D TK90_1480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TK90_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TK90_1855 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TK90_2130 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TK90_1252 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TK90_1867 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_0501 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_2116 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TK90_0248 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tkm02010]
D TK90_0964 putative nitrate transporter component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TK90_0665 nitrate-binding protein NrtA precursor, periplasmic K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TK90_0963 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D TK90_0666 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D TK90_0667 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TK90_0962 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TK90_1627 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D TK90_1628 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D TK90_1629 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D TK90_0299 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D TK90_0298 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D TK90_0297 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TK90_0383 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D TK90_0384 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TK90_1320 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TK90_1322 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TK90_0385 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TK90_0382 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D TK90_1321 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TK90_0386 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TK90_0957 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TK90_0956 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein
D TK90_0955 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D TK90_0954 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TK90_1712 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D TK90_1710 ABC-3 protein K09816 znuB; zinc transport system permease protein
D TK90_1711 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TK90_0689 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D TK90_0690 ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D TK90_1352 ABC-2 type transporter K18233 oleC5; oleandomycin transport system permease protein
D TK90_1353 daunorubicin resistance ABC transporter ATPase subunit K18232 oleC4; oleandomycin transport system ATP-binding protein
D TK90_1199 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D TK90_1200 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TK90_2114 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D TK90_2113 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D TK90_0369 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TK90_0168 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D TK90_0169 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TK90_0310 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TK90_0837 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D TK90_1316 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS) [PATH:tkm02060]
D TK90_0376 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TK90_0375 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TK90_0397 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D TK90_0372 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tkm03070]
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
D TK90_2856 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F
D TK90_2855 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TK90_2860 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TK90_1378 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TK90_1303 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TK90_1302 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TK90_2182 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TK90_0707 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TK90_2149 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TK90_1304 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TK90_2600 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TK90_2191 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TK90_0170 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TK90_2025 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D TK90_0426 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TK90_0130 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D TK90_0131 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D TK90_0132 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tkm02020]
D TK90_0958 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TK90_0959 two component transcriptional regulator PhoB, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D TK90_0957 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TK90_0243 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TK90_0242 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TK90_1952 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TK90_1732 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D TK90_1448 flagellin domain protein K02406 fliC; flagellin
D TK90_1450 flagellin domain protein K02406 fliC; flagellin
D TK90_1400 flagellin domain protein K02406 fliC; flagellin
D TK90_1175 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
D TK90_1180 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_1072 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_0578 putative chemotaxis (motility protein A) transmembrane K02556 motA; chemotaxis protein MotA
D TK90_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TK90_0077 D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TK90_0014 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TK90_0013 two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D TK90_2808 integral membrane sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D TK90_1612 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D TK90_2844 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D TK90_2817 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TK90_1499 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D TK90_2036 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D TK90_0049 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TK90_0050 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D TK90_2577 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TK90_2269 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TK90_2268 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D TK90_0965 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D TK90_0537 integral membrane sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D TK90_0848 putative two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D TK90_0538 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D TK90_2123 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TK90_2124 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D TK90_0370 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TK90_0925 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TK90_1402 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D TK90_0949 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_2562 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_1029 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_0580 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D TK90_1183 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D TK90_1184 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TK90_1178 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TK90_1176 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TK90_1179 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TK90_0924 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TK90_2397 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D TK90_2398 CheW protein K02659 pilI; twitching motility protein PilI
D TK90_2396 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TK90_2400 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D TK90_2399 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D TK90_2395 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D TK90_1155 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TK90_1156 sigma54 specific transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D TK90_2357 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TK90_0760 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TK90_2219 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TK90_0892 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TK90_2218 Cytochrome b/b6 domain protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TK90_2217 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D TK90_0158 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D TK90_0159 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D TK90_0161 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
D TK90_2495 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D TK90_0619 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D TK90_0620 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D TK90_1189 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D TK90_0621 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TK90_2542 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D TK90_1473 protein serine/threonine phosphatase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
D TK90_0922 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TK90_2219 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D TK90_0892 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tkm02024]
D TK90_0496 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TK90_2362 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TK90_2361 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D TK90_0379 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TK90_2818 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D TK90_2819 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D TK90_2820 conserved hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D TK90_2821 type IV secretory pathway VirB4 components-like protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D TK90_2824 Type IV secretory pathway TrbF protein-like protein K20531 trbF; type IV secretion system protein TrbF
D TK90_2825 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG
D TK90_2826 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D TK90_1313 conserved hypothetical protein K20276 bapA; large repetitive protein
D TK90_0673 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TK90_2357 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TK90_0760 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TK90_2432 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D TK90_1278 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D TK90_1885 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TK90_1919 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_1620 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_0599 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TK90_0600 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TK90_0601 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TK90_0602 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TK90_2600 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TK90_2182 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TK90_0707 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TK90_2149 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TK90_1304 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TK90_2191 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TK90_0170 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TK90_2025 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D TK90_0426 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tkm02030]
D TK90_1402 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D TK90_0949 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_2562 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_1029 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_0580 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D TK90_1178 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TK90_1183 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D TK90_1184 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TK90_1176 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TK90_1177 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D TK90_1179 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TK90_0924 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TK90_0925 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TK90_1159 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TK90_1165 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TK90_1166 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TK90_1180 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_1072 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_0578 putative chemotaxis (motility protein A) transmembrane K02556 motA; chemotaxis protein MotA
D TK90_1181 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_1071 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_0577 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tkm02040]
D TK90_1157 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TK90_1158 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TK90_1159 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TK90_1160 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D TK90_1161 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TK90_1162 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D TK90_1163 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D TK90_1164 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TK90_2336 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TK90_1165 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TK90_1166 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TK90_1167 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D TK90_1168 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TK90_1169 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TK90_1170 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TK90_1172 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TK90_1171 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TK90_0923 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D TK90_0926 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TK90_0927 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TK90_0928 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TK90_0929 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D TK90_0930 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D TK90_0931 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TK90_0932 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D TK90_0933 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D TK90_0934 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D TK90_0935 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TK90_0936 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TK90_0354 OmpA/MotB domain protein K21218 motY; sodium-type flagellar protein MotY
D TK90_1448 flagellin domain protein K02406 fliC; flagellin
D TK90_1450 flagellin domain protein K02406 fliC; flagellin
D TK90_1400 flagellin domain protein K02406 fliC; flagellin
D TK90_1447 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D TK90_1446 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D TK90_1445 hypothetical protein K02423 fliT; flagellar protein FliT
D TK90_1180 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_1072 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_0578 putative chemotaxis (motility protein A) transmembrane K02556 motA; chemotaxis protein MotA
D TK90_1181 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_1071 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_0577 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_0922 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D TK90_0921 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D TK90_0263 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D TK90_1155 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TK90_0370 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TK90_1156 sigma54 specific transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D TK90_1175 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TK90_1470 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:tkm04980]
D TK90_0791 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TK90_0182 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tkm01501]
D TK90_0069 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D TK90_1243 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TK90_1622 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1921 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2322 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_0856 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2316 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2321 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_0857 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_1621 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D TK90_1919 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_1620 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
D TK90_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TK90_1974 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TK90_2207 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tkm01502]
D TK90_0077 D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TK90_2198 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TK90_1930 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TK90_2205 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TK90_2204 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TK90_2201 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tkm01503]
D TK90_0243 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TK90_0242 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TK90_1310 conserved hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D TK90_0493 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TK90_1952 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TK90_0037 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D TK90_1622 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1921 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2322 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_0856 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2316 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2321 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_0857 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_1621 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
D TK90_1485 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tkm01000]
C 01001 Protein kinases [BR:tkm01001]
D TK90_0316 lipopolysaccharide kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D TK90_0135 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D TK90_1364 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D TK90_1874 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TK90_0621 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TK90_2507 conserved hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D TK90_0958 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TK90_0243 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TK90_2808 integral membrane sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D TK90_0014 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TK90_0049 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TK90_2269 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TK90_0537 integral membrane sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D TK90_2123 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TK90_1178 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TK90_2396 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TK90_1473 protein serine/threonine phosphatase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tkm01009]
D TK90_2392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TK90_0435 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D TK90_0073 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:tkm01002]
D TK90_2555 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TK90_2186 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TK90_1912 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TK90_0191 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D TK90_1328 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TK90_0265 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D TK90_2584 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TK90_2515 exosortase 1 system-associated amidotransferase 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_2520 Asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_1756 asparagine synthase family amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_0032 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_2533 conserved hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TK90_2019 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D TK90_1361 Abortive infection protein K07052 K07052; CAAX protease family protein
D TK90_2227 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TK90_0006 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D TK90_1310 conserved hypothetical protein K01406 prtC; serralysin [EC:3.4.24.40]
D TK90_0077 D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TK90_0171 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TK90_0172 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TK90_1080 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TK90_2115 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TK90_1077 Peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D TK90_1498 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TK90_1821 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TK90_0703 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TK90_0535 HtpX domain protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D TK90_0628 peptidase M48 Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D TK90_1490 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TK90_2335 protein of unknown function DUF980 K09933 mtfA; MtfA peptidase
D TK90_1952 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TK90_2479 protease Do K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D TK90_2221 HtrA2 peptidase K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D TK90_1970 Beta-lactamase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TK90_0467 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TK90_0573 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TK90_1136 putative ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TK90_0575 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TK90_1832 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D TK90_1949 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TK90_2581 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TK90_2020 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TK90_1193 peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-]
D TK90_1759 peptidase S49 K04774 sohB; serine protease SohB [EC:3.4.21.-]
D TK90_1220 Rhomboid family protein K07059 K07059; rhomboid family protein
D TK90_0116 20S proteasome A and B subunits K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TK90_1369 peptidase T2 asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TK90_0093 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TK90_1984 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D TK90_1986 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
D TK90_1941 HflC protein K04087 hflC; modulator of FtsH protease HflC
D TK90_1942 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tkm01003]
D TK90_2120 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D TK90_0902 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TK90_1297 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TK90_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tkm01005]
D TK90_1485 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TK90_1484 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TK90_2194 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D TK90_1487 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TK90_1918 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TK90_0594 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D TK90_2578 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TK90_0308 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TK90_2264 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TK90_2256 Protein of unknown function DUF2219 K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D TK90_0323 Three-deoxy-D-manno-octulosonic-acid transferase domain protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TK90_0306 lipopolysaccharide kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D TK90_1471 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TK90_0596 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TK90_0366 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TK90_0365 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TK90_0320 lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D TK90_0319 glycosyl transferase group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D TK90_0318 lipopolysaccharide kinase K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235]
D TK90_0315 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D TK90_0307 glycosyl transferase family 9 K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D TK90_0321 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D TK90_0322 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D TK90_0303 rfaE bifunctional protein K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D TK90_0304 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D TK90_0606 Glycosyl transferase, family 4, conserved region K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D TK90_1539 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tkm01011]
D TK90_0381 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TK90_2199 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TK90_2200 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TK90_2203 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D TK90_2206 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TK90_2198 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TK90_1930 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D TK90_2204 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D TK90_2201 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TK90_1065 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TK90_1897 phosphoesterase PA-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TK90_2558 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D TK90_0274 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TK90_1297 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D TK90_1974 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TK90_2207 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TK90_1970 Beta-lactamase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D TK90_0467 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TK90_0902 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TK90_0077 D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TK90_1077 Peptidase M23 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D TK90_2373 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TK90_1972 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D TK90_0498 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TK90_0695 Lytic transglycosylase catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D TK90_1254 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D TK90_1971 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TK90_0493 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TK90_2251 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tkm01004]
D TK90_1260 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TK90_1601 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TK90_0475 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D TK90_1257 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TK90_1259 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0472 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TK90_0744 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D TK90_1486 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TK90_0479 acyl carrier protein dehydratase-like protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D TK90_0598 short-chain dehydrogenase/reductase SDR K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TK90_1068 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TK90_2112 lipolytic protein G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TK90_1868 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TK90_0673 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TK90_1602 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TK90_0155 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TK90_2573 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D TK90_2802 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tkm01008]
D TK90_1033 beta-lactamase domain protein K05555 actIV; cyclase [EC:4.-.-.-]
C 01006 Prenyltransferases [BR:tkm01006]
D TK90_0416 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TK90_2004 Trans-hexaprenyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TK90_1493 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TK90_1512 squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TK90_0495 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TK90_1408 NAD(P)H dehydrogenase (quinone) K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TK90_2283 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:tkm01007]
D TK90_0814 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TK90_1916 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TK90_0851 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D TK90_0405 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TK90_1726 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TK90_0676 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TK90_0247 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TK90_1787 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TK90_2556 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TK90_0484 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TK90_2132 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TK90_0983 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TK90_0514 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TK90_0735 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TK90_2575 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TK90_2574 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TK90_0886 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TK90_0503 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TK90_0912 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TK90_1614 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TK90_0916 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TK90_0917 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TK90_1241 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TK90_1282 aminotransferase class I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D TK90_1032 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D TK90_1208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_0377 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TK90_2288 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TK90_0946 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TK90_1249 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TK90_0391 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TK90_1969 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D TK90_0301 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TK90_1895 Serine--pyruvate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D TK90_1205 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tkm00194]
D TK90_2586 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TK90_2587 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TK90_2588 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TK90_2589 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TK90_2590 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TK90_2591 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TK90_2592 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TK90_2593 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TK90_2594 ATP synthase I chain K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tkm03000]
D TK90_2746 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TK90_2326 transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D TK90_2340 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D TK90_0873 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D TK90_2314 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D TK90_1709 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D TK90_1248 transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D TK90_0025 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D TK90_0822 transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D TK90_2050 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TK90_2432 ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D TK90_2466 ferric uptake regulator, Fur family K09826 irr; Fur family transcriptional regulator, iron response regulator
D TK90_2357 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TK90_0760 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D TK90_0787 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D TK90_1326 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TK90_0829 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D TK90_1064 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D TK90_1608 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D TK90_0976 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TK90_2247 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TK90_1155 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TK90_0965 transcriptional regulator, NifA subfamily, Fis Family K02584 nifA; Nif-specific regulatory protein
D TK90_1869 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D TK90_2230 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D TK90_1541 transcriptional regulator, XRE family K07726 K07726; putative transcriptional regulator
D TK90_1569 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TK90_2237 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D TK90_2595 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_2775 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_2880 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_0458 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D TK90_0411 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor
D TK90_1743 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D TK90_2408 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TK90_2406 protein of unknown function DUF179 K07735 algH; putative transcriptional regulator
D TK90_2440 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_2297 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_0852 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_1886 ATP-cone domain protein K07738 nrdR; transcriptional repressor NrdR
D TK90_2210 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tkm03021]
D TK90_2144 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TK90_2176 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TK90_2175 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TK90_2002 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TK90_0263 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D TK90_1284 RNA polymerase, sigma 70 subunit, RpoD subfamily K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D TK90_1956 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TK90_0167 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D TK90_0370 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D TK90_1175 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
D TK90_0724 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D TK90_1680 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TK90_2181 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D TK90_2216 Glutathione S-transferase domain protein K03599 sspA; stringent starvation protein A
D TK90_2215 Stringent starvation protein B K03600 sspB; stringent starvation protein B
D TK90_1584 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D TK90_1873 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D TK90_1874 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TK90_1955 anti sigma-E protein, RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D TK90_1954 sigma E regulatory protein, MucB/RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D TK90_1953 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D TK90_2440 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_2297 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_0852 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_0700 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D TK90_2469 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TK90_2470 transcriptional antiterminator, Rof K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:tkm03019]
D TK90_1190 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D TK90_1989 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D TK90_1947 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TK90_1938 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TK90_1847 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-]
D TK90_2467 DEAD/DEAH box helicase domain protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D TK90_1028 DEAD/DEAH box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TK90_1046 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TK90_0839 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TK90_1470 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TK90_0729 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TK90_2469 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TK90_0460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TK90_0292 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TK90_0496 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TK90_0944 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TK90_2046 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D TK90_0396 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D TK90_1612 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D TK90_2844 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D TK90_0374 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D TK90_0245 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D TK90_2061 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tkm03011]
D TK90_1212 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TK90_1497 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TK90_2163 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TK90_2145 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TK90_2152 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TK90_1935 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TK90_2173 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TK90_2155 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TK90_0542 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TK90_2170 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TK90_2146 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TK90_2174 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TK90_2147 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TK90_2156 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TK90_0728 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TK90_0427 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TK90_2160 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TK90_1934 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TK90_2165 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TK90_0094 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TK90_0269 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TK90_2179 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TK90_2166 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TK90_2169 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TK90_2168 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D TK90_2157 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TK90_2154 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TK90_1932 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TK90_2178 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TK90_2180 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TK90_2177 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TK90_0541 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TK90_2159 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TK90_2150 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TK90_2162 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TK90_2143 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TK90_2153 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TK90_0430 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TK90_0915 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TK90_2005 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TK90_2164 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TK90_2167 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D TK90_2158 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TK90_2006 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TK90_1995 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TK90_2161 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TK90_2151 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TK90_2381 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D TK90_1603 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TK90_1996 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TK90_2603 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D TK90_0914 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TK90_2148 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D TK90_0346 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D TK90_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TK90_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TK90_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tkm03009]
D TK90_1947 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TK90_0316 lipopolysaccharide kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D TK90_1847 Exonuclease RNase T and DNA polymerase III K13288 orn; oligoribonuclease [EC:3.1.-.-]
D TK90_1946 GTP-binding protein Era K03595 era; GTPase
D TK90_2007 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D TK90_2440 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_2297 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_0852 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D TK90_0724 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D TK90_1680 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TK90_2181 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D TK90_1980 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TK90_2271 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D TK90_2367 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D TK90_0173 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D TK90_2394 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TK90_2597 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TK90_2209 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TK90_2211 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TK90_0893 protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D TK90_1937 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TK90_0702 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D TK90_2126 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D TK90_0688 putative RNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D TK90_1151 putative RNA 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D TK90_0732 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TK90_0590 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TK90_1753 RNA-binding S4 domain protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D TK90_1191 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D TK90_2034 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TK90_2374 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D TK90_1776 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D TK90_1766 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D TK90_0428 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D TK90_2382 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D TK90_2244 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D TK90_1845 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D TK90_1274 Cupin 4 family protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D TK90_1190 ribonuclease, Rne/Rng family K08300 rne; ribonuclease E [EC:3.1.26.12]
D TK90_1989 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D TK90_2407 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D TK90_1046 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TK90_1850 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TK90_0738 ribosome-associated GTPase EngA K03977 engA; GTPase
D TK90_0497 GTP-binding proten HflX K03665 hflX; GTPase
D TK90_2278 SUA5/yciO/yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TK90_2001 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TK90_0726 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D TK90_0723 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D TK90_2127 iojap-like protein K09710 ybeB; ribosome-associated protein
D TK90_2137 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D TK90_0701 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein
D TK90_0371 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D TK90_0348 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D TK90_1604 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tkm03016]
D TK90_2455 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D TK90_0814 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TK90_0503 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TK90_2556 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TK90_2132 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TK90_1787 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TK90_0247 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TK90_0983 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TK90_0514 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TK90_1614 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TK90_0912 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TK90_0886 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TK90_0676 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TK90_0484 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TK90_0735 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TK90_0916 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TK90_0917 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TK90_0405 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TK90_1726 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TK90_2582 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D TK90_1852 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TK90_2463 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TK90_1337 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D TK90_0727 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TK90_1293 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D TK90_0830 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TK90_2278 SUA5/yciO/yrdC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TK90_0495 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TK90_2599 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TK90_2598 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TK90_2417 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D TK90_2602 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TK90_R0051 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D TK90_1909 Protein of unknown function UPF0278 K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D TK90_0350 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D TK90_2474 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D TK90_0326 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D TK90_0847 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D TK90_0877 ABC transporter related protein K06020 ettA; energy-dependent translational throttle protein EttA
D TK90_2575 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D TK90_2574 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D TK90_0851 Glutamate--tRNA ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D TK90_1916 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D TK90_1354 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D TK90_1317 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D TK90_1275 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D TK90_2246 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D TK90_2139 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TK90_0429 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TK90_0827 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D TK90_0052 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D TK90_1266 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TK90_2579 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D TK90_0631 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D TK90_0832 iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D TK90_1881 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D TK90_1076 protein of unknown function DUF752 K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D TK90_1306 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TK90_2422 Queuosine synthesis-like protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TK90_0570 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D TK90_0414 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TK90_0569 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TK90_1578 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D TK90_0490 iron-sulfur cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D TK90_1305 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TK90_1380 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D TK90_1478 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TK90_2561 protein of unknown function DUF699 ATPase putative K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D TK90_1294 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TK90_0154 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TK90_0492 protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TK90_2571 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D TK90_1938 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TK90_0729 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TK90_1533 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:tkm03012]
D TK90_0725 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TK90_0913 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TK90_2338 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TK90_1496 translation elongation factor Ts K02357 tsf; elongation factor Ts
D TK90_2171 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TK90_2183 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TK90_2172 translation elongation factor G K02355 fusA; elongation factor G
D TK90_0340 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TK90_1494 ribosome recycling factor K02838 frr; ribosome recycling factor
D TK90_0339 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TK90_0347 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TK90_1261 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D TK90_0465 translation elongation factor P K02356 efp; elongation factor P
D TK90_0466 Lysine--tRNA ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D TK90_0464 lysine 2,3-aminomutase YodO family protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D TK90_0982 conserved hypothetical protein K02836 prfB; peptide chain release factor 2
D TK90_1774 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D TK90_1772 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tkm03110]
D TK90_1262 ATP-dependent Clp protease, ATP-binding subunit clpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D TK90_2032 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D TK90_0574 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TK90_0115 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TK90_0435 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D TK90_0460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TK90_0834 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D TK90_0292 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TK90_0461 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TK90_2478 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D TK90_0833 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D TK90_0334 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D TK90_0459 GrpE protein K03687 GRPE; molecular chaperone GrpE
D TK90_2477 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D TK90_1366 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D TK90_2048 RNA-binding S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D TK90_0291 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D TK90_1952 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D TK90_0703 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D TK90_2593 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TK90_2025 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D TK90_1731 protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A
D TK90_1917 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D TK90_0597 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D TK90_2554 peptidylprolyl isomerase FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D TK90_0436 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TK90_0067 putative peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TK90_1730 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D TK90_1978 Peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D TK90_2468 thioredoxin K03671 TXN; thioredoxin
D TK90_0362 thioredoxin K03671 TXN; thioredoxin
D TK90_2102 thioredoxin K05838 ybbN; putative thioredoxin
D TK90_2024 glutaredoxin K03676 grxC; glutaredoxin 3
D TK90_0349 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D TK90_0037 DSBA oxidoreductase K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D TK90_2103 Disulphide bond isomerase, DsbC/G-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_2771 Disulphide bond isomerase, DsbC/G-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_1639 protein-disulfide isomerase-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_2812 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_0285 cytochrome c biogenesis protein transmembrane region K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:tkm04131]
D TK90_0731 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TK90_1664 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_2389 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TK90_2387 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_1642 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_0435 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D TK90_0586 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D TK90_2385 protein of unknown function DUF500 K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C 04121 Ubiquitin system [BR:tkm04121]
C 03051 Proteasome [BR:tkm03051]
D TK90_0435 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tkm03032]
D TK90_0500 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TK90_2746 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TK90_0576 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TK90_0918 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D TK90_1213 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D TK90_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TK90_1931 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TK90_1232 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TK90_0264 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TK90_2605 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2780 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2885 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_1480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TK90_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TK90_2116 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TK90_2130 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TK90_1252 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TK90_1867 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_0501 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_1855 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TK90_1481 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TK90_0044 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TK90_2695 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_1575 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_2747 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TK90_0556 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D TK90_1204 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TK90_2770 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TK90_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TK90_2768 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TK90_0532 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TK90_2101 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TK90_2277 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tkm03036]
D TK90_2746 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TK90_1947 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_0576 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TK90_0918 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D TK90_1213 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D TK90_2478 heat shock protein DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D TK90_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D TK90_1222 hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D TK90_2247 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TK90_0496 RNA chaperone Hfq K03666 hfq; host factor-I protein
D TK90_1709 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D TK90_1577 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D TK90_1725 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D TK90_1724 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D TK90_2196 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TK90_1469 Septum formation initiator K05589 ftsB; cell division protein FtsB
D TK90_0169 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TK90_2207 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D TK90_1827 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TK90_2208 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D TK90_2197 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D TK90_2202 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TK90_0168 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D TK90_2195 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TK90_1576 cell division protein ZipA K03528 zipA; cell division protein ZipA
D TK90_1825 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D TK90_1824 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D TK90_2188 protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD
D TK90_0493 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TK90_1622 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1921 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2322 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_0856 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2316 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1838 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TK90_1837 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TK90_1836 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D TK90_2314 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D TK90_0330 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TK90_0329 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D TK90_0328 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D TK90_1973 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D TK90_2879 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_1182 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_0869 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_2596 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_2774 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_2595 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_2775 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_2880 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_0532 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TK90_2101 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TK90_2598 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TK90_2597 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TK90_0117 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D TK90_2104 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D TK90_1786 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TK90_0041 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tkm03400]
D TK90_0431 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TK90_0820 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D TK90_2484 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TK90_1735 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TK90_1024 ERCC4 domain protein K10896 FANCM; fanconi anemia group M protein
D TK90_2189 thiamine monophosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TK90_2047 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TK90_2717 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TK90_2260 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TK90_0821 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D TK90_1599 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TK90_1777 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TK90_2660 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D TK90_2000 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TK90_2263 DNA-(apurinic or apyrimidinic site) lyase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D TK90_0007 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TK90_0070 exodeoxyribonuclease III Xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TK90_2811 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TK90_2695 DNA ligase (NAD(+)) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_1575 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TK90_0044 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TK90_2142 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D TK90_1242 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D TK90_1598 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D TK90_0096 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TK90_2706 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TK90_2176 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TK90_2175 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TK90_2144 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TK90_2002 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D TK90_1195 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TK90_1619 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TK90_0784 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D TK90_0494 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TK90_1915 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D TK90_0417 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TK90_1480 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TK90_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TK90_2116 DNA polymerase III chi subunit HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D TK90_2130 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TK90_1252 DNA-directed DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TK90_1867 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_0501 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TK90_1855 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TK90_2605 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2780 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2885 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2747 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TK90_1624 exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D TK90_1625 exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D TK90_1623 exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D TK90_1616 recA protein K03553 recA; recombination protein RecA
D TK90_2016 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TK90_0561 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TK90_2017 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TK90_0248 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TK90_0423 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TK90_0003 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D TK90_2010 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TK90_2813 helicase domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TK90_1945 Recombination protein O RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D TK90_1853 recombination protein RecR K06187 recR; recombination protein RecR
D TK90_0456 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D TK90_2447 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TK90_2792 type III restriction protein res subunit K19789 radD; DNA repair protein RadD
D TK90_1204 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TK90_2770 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TK90_0004 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TK90_2768 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TK90_2277 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TK90_0576 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TK90_2247 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D TK90_0918 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D TK90_1213 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D TK90_0839 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TK90_1832 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D TK90_1833 SOS cell division inhibitor SulA K14160 imuA; protein ImuA
D TK90_1834 conserved hypothetical protein K14161 imuB; protein ImuB
D TK90_1095 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D TK90_1615 regulatory protein RecX K03565 recX; regulatory protein
D TK90_2254 UvrD/REP helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D TK90_1295 helicase c2 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TK90_2699 Rad3-related DNA helicase-like protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TK90_2240 DEAD/H associated domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D TK90_1442 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TK90_0256 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TK90_1441 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tkm03029]
D TK90_2218 Cytochrome b/b6 domain protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D TK90_0725 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TK90_0913 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TK90_1496 translation elongation factor Ts K02357 tsf; elongation factor Ts
D TK90_2171 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TK90_2183 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TK90_2172 translation elongation factor G K02355 fusA; elongation factor G
D TK90_1946 GTP-binding protein Era K03595 era; GTPase
D TK90_0405 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TK90_2132 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TK90_0514 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TK90_0247 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TK90_0332 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TK90_0333 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TK90_0331 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TK90_2605 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2140 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2780 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_2885 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D TK90_1489 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D TK90_0460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TK90_0459 GrpE protein K03687 GRPE; molecular chaperone GrpE
D TK90_0292 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TK90_0291 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D TK90_0461 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TK90_0830 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TK90_0833 co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB
D TK90_0349 glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D TK90_1786 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TK90_2600 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TK90_0042 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D TK90_0188 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D TK90_0435 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tkm02000]
D TK90_0310 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TK90_0617 ABC transporter related protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D TK90_2527 ABC transporter related protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D TK90_0837 ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D TK90_1316 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TK90_2563 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D TK90_1627 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D TK90_1628 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D TK90_1629 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D TK90_0964 putative nitrate transporter component K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TK90_0665 nitrate-binding protein NrtA precursor, periplasmic K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D TK90_0963 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D TK90_0666 nitrate ABC transporter, inner membrane subunit K15577 nrtB; nitrate/nitrite transport system permease protein
D TK90_0667 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TK90_0962 nitrate ABC transporter, ATPase subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D TK90_0299 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D TK90_0298 binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein
D TK90_0297 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D TK90_0967 twin-arginine translocation pathway signal K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TK90_1583 NMT1/THI5 like domain protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D TK90_0966 binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D TK90_0968 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D TK90_0198 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D TK90_0197 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D TK90_0384 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TK90_1320 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D TK90_1322 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TK90_0385 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TK90_1321 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TK90_0386 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TK90_1319 protein of unknown function DUF330 K18480 linN; cholesterol transport system auxiliary component
D TK90_0383 toluene tolerance family protein K07323 mlaC; phospholipid transport system substrate-binding protein
D TK90_0382 anti-sigma-factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D TK90_0957 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TK90_0956 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein
D TK90_0955 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D TK90_0954 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TK90_1582 protein of unknown function UPF0126 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TK90_1407 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TK90_1477 extracellular solute-binding protein family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D TK90_0599 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TK90_0600 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D TK90_0601 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TK90_0602 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TK90_1460 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TK90_1461 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D TK90_1462 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TK90_1712 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D TK90_1710 ABC-3 protein K09816 znuB; zinc transport system permease protein
D TK90_1711 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D TK90_2435 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D TK90_2437 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D TK90_2436 ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D TK90_2114 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D TK90_2113 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D TK90_0369 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TK90_0689 ABC-2 type transporter, NodJ family K09694 nodJ; lipooligosaccharide transport system permease protein
D TK90_0690 ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D TK90_1352 ABC-2 type transporter K18233 oleC5; oleandomycin transport system permease protein
D TK90_1353 daunorubicin resistance ABC transporter ATPase subunit K18232 oleC4; oleandomycin transport system ATP-binding protein
D TK90_1199 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein
D TK90_1200 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TK90_0168 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D TK90_0169 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D TK90_0800 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TK90_1078 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D TK90_0799 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TK90_1079 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TK90_1688 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D TK90_2063 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D TK90_1066 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D TK90_2064 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TK90_1689 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TK90_1067 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TK90_0948 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D TK90_1739 major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D TK90_1346 major facilitator superfamily MFS_1 K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D TK90_0069 major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D TK90_2360 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D TK90_0586 major facilitator superfamily MFS_1 K06902 UMF1; MFS transporter, UMF1 family
D TK90_0397 PTSINtr with GAF domain, PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D TK90_0376 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D TK90_0375 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D TK90_0372 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D TK90_1696 Ion transport protein K08714 VGSC; voltage-gated sodium channel
D TK90_1706 Ion transport protein K08714 VGSC; voltage-gated sodium channel
D TK90_0196 putative ammonium transporter, marine subtype K03320 amt; ammonium transporter, Amt family
D TK90_2049 Glutathione S-transferase domain protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D TK90_2216 Glutathione S-transferase domain protein K03599 sspA; stringent starvation protein A
D TK90_0896 protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease
D TK90_1655 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D TK90_0901 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D TK90_1690 magnesium transporter K06213 mgtE; magnesium transporter
D TK90_1691 magnesium transporter K06213 mgtE; magnesium transporter
D TK90_1180 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_1072 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_0578 putative chemotaxis (motility protein A) transmembrane K02556 motA; chemotaxis protein MotA
D TK90_1181 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_1071 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_0577 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_0354 OmpA/MotB domain protein K21218 motY; sodium-type flagellar protein MotY
D TK90_0591 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D TK90_0438 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D TK90_0440 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TK90_0592 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TK90_0439 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D TK90_0563 protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D TK90_0564 protein TolR K03560 tolR; biopolymer transport protein TolR
D TK90_2074 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D TK90_0884 Camphor resistance CrcB protein K06199 crcB; fluoride exporter
D TK90_0885 CrcB protein K06199 crcB; fluoride exporter
D TK90_0424 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TK90_2334 OmpA domain protein transmembrane region-containing protein K16079 omp31; outer membrane immunogenic protein
D TK90_1117 putative outer-membrane protein K16079 omp31; outer membrane immunogenic protein
D TK90_0811 phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP
D TK90_0293 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D TK90_1858 OmpA domain protein transmembrane region-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D TK90_2013 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D TK90_0645 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D TK90_0445 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D TK90_0790 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D TK90_0021 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TK90_2096 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
D TK90_1307 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D TK90_1919 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_1620 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_2495 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D TK90_0619 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D TK90_1489 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D TK90_0737 outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D TK90_0409 putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D TK90_2035 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D TK90_2051 SmpA/OmlA domain protein K06186 bamE; outer membrane protein assembly factor BamE
D TK90_0296 surface antigen (D15) K07278 tamA; translocation and assembly module TamA
D TK90_0295 protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB
D TK90_0368 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D TK90_0367 protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC
D TK90_1977 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D TK90_2131 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D TK90_2136 CBS domain containing protein K06189 corC; hemolysin (HlyC) family protein
D TK90_1721 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D TK90_2321 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_0857 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_1621 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D TK90_2664 hypothetical protein K11742 mdtI; spermidine export protein MdtI
D TK90_0078 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D TK90_1596 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D TK90_1396 L-lactate permease K03303 lutP; lactate permease
D TK90_0174 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein
D TK90_2029 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein
D TK90_0364 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D TK90_0029 Na+/solute symporter K20989 DUR3; urea-proton symporter
D TK90_1865 putative sodium symporter protein K14393 actP; cation/acetate symporter
D TK90_1831 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D TK90_2255 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D TK90_2266 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D TK90_2267 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D TK90_0843 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease
D TK90_0081 chromate transporter, chromate ion transporter (CHR) family K07240 chrA; chromate transporter
D TK90_0897 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D TK90_0019 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D TK90_0985 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D TK90_0740 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter
D TK90_1907 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D TK90_1762 Bile acid:sodium symporter K03325 ACR3; arsenite transporter
D TK90_0748 NADH/Ubiquinone/plastoquinone (complex I) K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D TK90_0749 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D TK90_0750 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TK90_1002 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D TK90_0751 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TK90_1000 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D TK90_0752 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TK90_1006 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D TK90_1005 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TK90_0753 multiple resistance and pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D TK90_0754 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TK90_1004 Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D TK90_2558 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D TK90_0363 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D TK90_1990 protein of unknown function UPF0118 K03548 perM; putative permease
D TK90_2079 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D TK90_0587 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D TK90_2202 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TK90_1664 protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D TK90_0674 high-affinity nickel-transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D TK90_2405 TonB family protein K03832 tonB; periplasmic protein TonB
D TK90_0441 TonB family protein K03832 tonB; periplasmic protein TonB
D TK90_0567 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D TK90_0565 protein TolA K03646 tolA; colicin import membrane protein
D TK90_0566 Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D TK90_1419 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D TK90_2097 efflux transporter, RND family, MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D TK90_1315 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D TK90_1622 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1921 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2322 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_0856 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2316 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1732 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D TK90_2507 conserved hypothetical protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D TK90_2506 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily K25590 epsF; protein tyrosine kinase modulator
D TK90_0621 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TK90_1348 TspO and MBR like protein K05770 TSPO; translocator protein
D TK90_2253 Entericidin EcnAB K16347 ecnA; entericidin A
D TK90_2222 copper resistance D domain protein K07245 pcoD; copper resistance protein D
D TK90_2223 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:tkm02044]
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
D TK90_1316 type I secretion system ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D TK90_1315 type I secretion membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D TK90_1307 type I secretion outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D TK90_2509 secretion ATPase, PEP-CTERM locus subfamily K02450 gspA; general secretion pathway protein A
D TK90_2855 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TK90_2860 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TK90_1378 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D TK90_2856 Type II secretion system F domain protein K02455 gspF; general secretion pathway protein F
D TK90_2186 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TK90_2184 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D TK90_2185 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D TK90_0208 putative prepilin like protein K02655 pilE; type IV pilus assembly protein PilE
D TK90_0220 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D TK90_0733 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D TK90_2400 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D TK90_2399 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D TK90_2398 CheW protein K02659 pilI; twitching motility protein PilI
D TK90_2397 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D TK90_0275 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D TK90_0276 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D TK90_0277 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D TK90_0278 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D TK90_0279 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D TK90_2414 twitching motility protein K02669 pilT; twitching motility protein PilT
D TK90_2412 twitching motility protein K02670 pilU; twitching motility protein PilU
D TK90_2413 twitching motility protein K02670 pilU; twitching motility protein PilU
D TK90_0213 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D TK90_0212 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D TK90_0211 Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D TK90_0210 Neisseria PilC domain protein K02674 pilY1; type IV pilus assembly protein PilY1
D TK90_1251 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D TK90_0214 pre-pilin like leader sequence K08084 fimT; type IV fimbrial biogenesis protein FimT
D TK90_0215 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D TK90_0219 putative type IV pilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D TK90_1339 FimV N-terminal domain protein K08086 fimV; pilus assembly protein FimV
D TK90_2817 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D TK90_2426 protein of unknown function YGGT K02221 yggT; YggT family protein
D TK90_1218 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D TK90_1202 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D TK90_1172 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TK90_1171 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TK90_1187 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein
D TK90_1158 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TK90_1160 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D TK90_1161 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TK90_1166 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TK90_1167 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D TK90_1168 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TK90_1169 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TK90_1170 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TK90_2814 Relaxase K12070 traI; conjugal transfer pilus assembly protein TraI
D TK90_2815 type IV conjugative transfer system protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D TK90_2103 Disulphide bond isomerase, DsbC/G-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_2771 Disulphide bond isomerase, DsbC/G-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_1639 protein-disulfide isomerase-like protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_2812 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D TK90_2818 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D TK90_2819 Conjugal transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D TK90_2820 conserved hypothetical protein K20529 trbD; type IV secretion system protein TrbD
D TK90_2821 type IV secretory pathway VirB4 components-like protein K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D TK90_2824 Type IV secretory pathway TrbF protein-like protein K20531 trbF; type IV secretion system protein TrbF
D TK90_2825 Conjugal transfer protein TrbG/VirB9/CagX K20532 trbG; type IV secretion system protein TrbG
D TK90_2826 conjugation TrbI family protein K20533 trbI; type IV secretion system protein TrbI
D TK90_2191 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TK90_2025 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB
D TK90_1303 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D TK90_2182 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D TK90_1302 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D TK90_0707 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D TK90_2149 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D TK90_0426 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TK90_0170 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TK90_1304 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D TK90_2600 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TK90_0130 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D TK90_0131 twin-arginine translocation protein, TatB subunit K03117 tatB; sec-independent protein translocase protein TatB
D TK90_0132 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tkm02042]
D TK90_0424 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tkm02022]
D TK90_0958 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TK90_0959 two component transcriptional regulator PhoB, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D TK90_0243 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TK90_0242 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TK90_2808 integral membrane sensor hybrid histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D TK90_0014 signal transduction histidine kinase, LytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D TK90_0013 two component transcriptional regulator, LytTR family K08083 algR; two-component system, LytTR family, response regulator AlgR
D TK90_0049 signal transduction histidine kinase, nitrogen specific, NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D TK90_0050 nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D TK90_2269 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D TK90_2268 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D TK90_0537 integral membrane sensor signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D TK90_0848 putative two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG
D TK90_0538 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D TK90_2123 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TK90_2124 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D TK90_2498 two component, sigma54 specific, transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator
D TK90_1178 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TK90_1176 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TK90_1179 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TK90_0924 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TK90_2396 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TK90_2400 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D TK90_2399 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D TK90_1156 sigma54 specific transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D TK90_1473 protein serine/threonine phosphatase K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:tkm02035]
D TK90_1178 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TK90_1183 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D TK90_1184 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D TK90_0925 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D TK90_1179 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TK90_1176 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TK90_1177 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ
D TK90_0924 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D TK90_1402 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein
D TK90_0949 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_2562 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_1029 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D TK90_0580 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor
D TK90_1160 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D TK90_1161 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D TK90_1162 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D TK90_1167 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D TK90_1168 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D TK90_1169 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D TK90_1170 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D TK90_1172 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D TK90_1171 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D TK90_1159 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D TK90_1165 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D TK90_1166 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D TK90_1158 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D TK90_0933 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D TK90_0923 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D TK90_0932 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D TK90_1164 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TK90_2336 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D TK90_1157 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D TK90_1163 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D TK90_0926 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D TK90_0927 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D TK90_0928 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D TK90_0930 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D TK90_0931 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D TK90_0934 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D TK90_0929 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D TK90_0935 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D TK90_0936 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D TK90_0921 FlgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D TK90_0354 OmpA/MotB domain protein K21218 motY; sodium-type flagellar protein MotY
D TK90_1448 flagellin domain protein K02406 fliC; flagellin
D TK90_1450 flagellin domain protein K02406 fliC; flagellin
D TK90_1400 flagellin domain protein K02406 fliC; flagellin
D TK90_1447 flagellar hook-associated 2 domain protein K02407 fliD; flagellar hook-associated protein 2
D TK90_1446 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D TK90_1445 hypothetical protein K02423 fliT; flagellar protein FliT
D TK90_1175 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily K02405 fliA; RNA polymerase sigma factor FliA
D TK90_1180 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_1072 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D TK90_0578 putative chemotaxis (motility protein A) transmembrane K02556 motA; chemotaxis protein MotA
D TK90_1181 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_1071 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_0577 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D TK90_1155 sigma54 specific transcriptional regulator, Fis family K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D TK90_1156 sigma54 specific transcriptional regulator, Fis family K10943 flrC; two-component system, response regulator FlrC
D TK90_0922 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D TK90_1449 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D TK90_1173 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D TK90_1174 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D TK90_1591 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D TK90_2400 response regulator receiver protein K02657 pilG; twitching motility two-component system response regulator PilG
D TK90_2399 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D TK90_2398 CheW protein K02659 pilI; twitching motility protein PilI
D TK90_2397 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D TK90_2396 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D TK90_2124 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D TK90_2123 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D TK90_2414 twitching motility protein K02669 pilT; twitching motility protein PilT
D TK90_2412 twitching motility protein K02670 pilU; twitching motility protein PilU
D TK90_2413 twitching motility protein K02670 pilU; twitching motility protein PilU
D TK90_2395 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D TK90_2184 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D TK90_2185 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D TK90_2186 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D TK90_0733 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D TK90_0279 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D TK90_0278 Pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D TK90_0277 Pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D TK90_0276 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D TK90_0275 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D TK90_1251 type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D TK90_0213 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D TK90_0212 type IV pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D TK90_0211 Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D TK90_0210 Neisseria PilC domain protein K02674 pilY1; type IV pilus assembly protein PilY1
D TK90_0208 putative prepilin like protein K02655 pilE; type IV pilus assembly protein PilE
D TK90_0220 pilus assembly protein K02655 pilE; type IV pilus assembly protein PilE
D TK90_2817 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tkm04812]
D TK90_0330 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TK90_2195 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TK90_2196 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TK90_1838 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D TK90_1837 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D TK90_1836 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D TK90_2879 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_1182 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_0869 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_2596 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_2774 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D TK90_2595 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_2775 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TK90_2880 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tkm04147]
D TK90_0435 ATP-binding region ATPase domain protein K04079 HSP90A; molecular chaperone HtpG
D TK90_1149 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TK90_1470 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TK90_2389 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TK90_2388 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TK90_2387 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_1642 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TK90_0292 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TK90_0460 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D TK90_2119 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TK90_1913 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TK90_2171 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TK90_2183 translation elongation factor Tu K02358 tuf; elongation factor Tu
D TK90_1852 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TK90_0673 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TK90_0504 macrophage migration inhibitory factor family protein K07253 MIF; phenylpyruvate tautomerase [EC:5.3.2.1]
D TK90_2392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TK90_1976 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TK90_0055 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TK90_0015 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TK90_0355 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TK90_0084 Inositol phosphatase/fructose-16-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TK90_1530 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TK90_1465 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D TK90_2577 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TK90_2280 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TK90_0283 PfkB domain protein K00846 KHK; ketohexokinase [EC:2.7.1.3]
D TK90_1849 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TK90_0868 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TK90_1206 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TK90_0178 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TK90_0353 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0550 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TK90_0706 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:tkm02048]
D TK90_2447 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D TK90_2448 CRISPR-associated helicase Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D TK90_2748 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK90_2449 CRISPR-associated protein, Csy1 family K19127 csy1; CRISPR-associated protein Csy1
D TK90_2450 CRISPR-associated protein, Csy2 family K19128 csy2; CRISPR-associated protein Csy2
D TK90_2451 CRISPR-associated protein, Csy3 family K19129 csy3; CRISPR-associated protein Csy3
D TK90_2452 CRISPR-associated protein, Csy4 family K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D TK90_1637 Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TK90_1635 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TK90_1634 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TK90_2747 D12 class N6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D TK90_2746 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D TK90_2800 restriction endonuclease K07448 mrr; restriction system protein
D TK90_2743 conserved hypothetical protein K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D TK90_2744 transcriptional regulator, AbrB family K19156 prlF; antitoxin PrlF
D TK90_2100 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE
D TK90_1569 CopG domain protein DNA-binding domain protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D TK90_1114 protein of unknown function UPF0150 K18843 hicB; antitoxin HicB
D TK90_0223 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D TK90_0224 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D TK90_1633 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D TK90_1105 plasmid maintenance system antidote protein, XRE family K21498 higA-1; antitoxin HigA-1
D TK90_1533 PilT protein domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D TK90_2195 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TK90_0330 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D TK90_0532 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TK90_2101 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TK90_0814 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TK90_1875 nitrogen-fixing NifU domain protein K19168 cptA; toxin CptA
D TK90_1876 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D TK90_0830 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TK90_2713 phosphoadenosine phosphosulfate reductase K19170 dndC; DNA sulfur modification protein DndC
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:tkm04090]
C 01504 Antimicrobial resistance genes [BR:tkm01504]
D TK90_1523 Gentamicin 3'-N-acetyltransferase K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60]
D TK90_1352 ABC-2 type transporter K18233 oleC5; oleandomycin transport system permease protein
D TK90_1353 daunorubicin resistance ABC transporter ATPase subunit K18232 oleC4; oleandomycin transport system ATP-binding protein
D TK90_1421 streptogramin lyase K18235 vgb; virginiamycin B lyase [EC:4.2.99.-]
D TK90_0077 D-Ala-D-Ala dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D TK90_0243 integral membrane sensor signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D TK90_0242 two component transcriptional regulator, winged helix family K07660 phoP; two-component system, OmpR family, response regulator PhoP
D TK90_1622 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_1921 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2322 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_0856 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2316 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TK90_2321 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_0857 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TK90_1621 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K18138 acrB; multidrug efflux pump
D TK90_1919 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_1620 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D TK90_2457 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein
D TK90_1351 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tkm03100]
D TK90_R0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TK90_R0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TK90_R0028 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TK90_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0018 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0029 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TK90_R0035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TK90_R0034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TK90_R0016 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TK90_R0041 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TK90_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0004 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0003 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0005 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TK90_R0026 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TK90_R0049 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TK90_R0053 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TK90_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TK90_R0019 tRNA-His K14226 tRNA-His; tRNA His
D TK90_R0008 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TK90_R0036 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TK90_R0013 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TK90_R0020 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TK90_R0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D TK90_R0002 tRNA-Met K14230 tRNA-Met; tRNA Met
D TK90_R0023 tRNA-Met K14230 tRNA-Met; tRNA Met
D TK90_R0055 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TK90_R0017 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TK90_R0046 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TK90_R0027 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TK90_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0040 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0038 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TK90_R0048 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TK90_R0037 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TK90_R0054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TK90_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TK90_R0050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TK90_R0039 tRNA-Val K14237 tRNA-Val; tRNA Val
D TK90_R0015 tRNA-Val K14237 tRNA-Val; tRNA Val
D TK90_R0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D TK90_R0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TK90_R0010 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TK90_R0011 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TK90_R0044 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D TK90_R0051 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D TK90_R0033 ssrA; tmRNA as predicted by Rfam (RF00023), score 262.93 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TK90_2560 short-chain dehydrogenase/reductase SDR K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D TK90_0989 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D TK90_2262 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D TK90_1347 glyceraldehyde-3-phosphate dehydrogenase, type I K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D TK90_2346 Alcohol dehydrogenase zinc-binding domain protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D TK90_2261 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TK90_2319 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TK90_2323 Glutathione transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D TK90_1683 oxidoreductase molybdopterin binding protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D TK90_1660 Alternative oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11]
D TK90_0812 Cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D TK90_0412 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TK90_1717 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TK90_1464 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TK90_0190 Oxidoreductase FAD-binding domain protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D TK90_2224 multicopper oxidase type 3 K22348 moxA; manganese oxidase [EC:1.16.3.3]
D TK90_1513 squalene-associated FAD-dependent desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D TK90_0233 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TK90_0488 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D TK90_0559 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D TK90_0999 NADH/Ubiquinone/plastoquinone (complex I) K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D TK90_2456 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TK90_1287 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TK90_0788 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TK90_1840 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TK90_1804 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D TK90_1044 thiopurine S-methyltransferase K21552 HOL; methyl halide transferase [EC:2.1.1.165]
D TK90_2135 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D TK90_1899 phospholipid/glycerol acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D TK90_1050 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D TK90_1325 transglutaminase domain protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D TK90_0181 Arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D TK90_1903 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TK90_1483 Glutamine--scyllo-inositol transaminase K20084 gnnB; UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase [EC:2.6.1.122]
D TK90_2402 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TK90_2427 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D TK90_0300 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D TK90_1440 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D TK90_0373 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D TK90_1059 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D TK90_0562 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TK90_0942 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D TK90_1385 signal transduction protein containing sensor and EAL domains-like protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D TK90_2570 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TK90_2228 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TK90_2486 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TK90_2273 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TK90_1987 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D TK90_1607 maf protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D TK90_1323 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TK90_0491 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TK90_1510 squalene synthase HpnC K21679 hpnC; hydroxysqualene synthase [EC:4.2.3.156]
D TK90_0685 peptidylprolyl isomerase FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D TK90_0359 UDP-N-acetylmuramate K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D TK90_1908 ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
D TK90_1793 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D TK90_1792 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D TK90_1791 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D TK90_0164 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D TK90_0520 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
D TK90_0653 Histone deacetylase K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D TK90_1023 4Fe-4S ferredoxin iron-sulfur binding domain protein K05524 fdxA; ferredoxin
D TK90_1794 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D TK90_1795 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D TK90_1790 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D TK90_0831 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D TK90_0652 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D TK90_0872 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D TK90_0871 CbbQ/NirQ/NorQ domain protein K04748 norQ; nitric oxide reductase NorQ protein
D TK90_0651 ATPase associated with various cellular activities AAA_5 K04748 norQ; nitric oxide reductase NorQ protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TK90_1581 protein of unknown function DUF540 K06203 cysZ; CysZ protein
D TK90_1466 Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D TK90_2415 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D TK90_1214 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D TK90_0101 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D TK90_0102 Sterol-binding domain protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D TK90_0151 protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D TK90_2108 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
D TK90_2086 DoxX family protein K15977 K15977; putative oxidoreductase
D TK90_1503 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TK90_2559 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D TK90_0195 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
C 99974 Translation
D TK90_1906 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D TK90_1263 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D TK90_0572 trigger factor K03545 tig; trigger factor
D TK90_1682 Ferric reductase domain protein protein transmembrane component domain protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D TK90_2055 SsrA-binding protein K03664 smpB; SsrA-binding protein
D TK90_0150 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D TK90_0255 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D TK90_1674 20S proteasome A and B subunits K07395 K07395; putative proteasome-type protease
D TK90_2356 OsmC family protein K07397 yhfA; putative redox protein
D TK90_0039 ResB family protein K07399 resB; cytochrome c biogenesis protein
D TK90_2106 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D TK90_2291 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D TK90_1509 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D TK90_1752 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D TK90_2213 protein of unknown function UPF0102 K07460 yraN; putative endonuclease
D TK90_2275 DNA protecting protein DprA K04096 smf; DNA processing protein
D TK90_0658 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D TK90_2876 plasmid-related protein K06919 K06919; putative DNA primase/helicase
D TK90_0589 3'-5' exonuclease, PolB-like protein K07501 K07501; 3'-5' exonuclease
D TK90_0076 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D TK90_1561 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D TK90_1110 transposase IS4 family protein K07481 K07481; transposase, IS5 family
D TK90_1394 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_0261 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_1654 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_1537 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_1098 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_0825 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_2886 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_1703 transposase IS3/IS911 family protein K07483 K07483; transposase
D TK90_0083 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D TK90_1291 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D TK90_0338 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D TK90_0222 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_0228 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_0422 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_1542 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_1687 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_1707 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_2037 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_2066 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_2068 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_0809 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_1049 transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D TK90_1685 transposase, putative K07491 rayT; REP-associated tyrosine transposase
D TK90_1552 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_1558 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_1554 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_1556 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_1574 conserved hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D TK90_1811 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_1812 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_1813 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D TK90_2689 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TK90_2736 transposase, IS605 OrfB family K07496 K07496; putative transposase
D TK90_1138 Integrase catalytic region K07497 K07497; putative transposase
D TK90_1137 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D TK90_0260 Integrase catalytic region K07497 K07497; putative transposase
D TK90_1393 Integrase catalytic region K07497 K07497; putative transposase
D TK90_1536 Integrase catalytic region K07497 K07497; putative transposase
D TK90_1653 Integrase catalytic region K07497 K07497; putative transposase
D TK90_0824 Integrase catalytic region K07497 K07497; putative transposase
D TK90_1097 Integrase catalytic region K07497 K07497; putative transposase
D TK90_2887 Integrase catalytic region K07497 K07497; putative transposase
D TK90_1143 integrase family protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D TK90_1854 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TK90_1920 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D TK90_0023 choline/carnitine/betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D TK90_0142 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D TK90_2054 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D TK90_0741 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D TK90_1722 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D TK90_1626 Na+ dependent nucleoside transporter domain protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D TK90_2021 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D TK90_0204 GTP-binding protein TypA K06207 typA; GTP-binding protein
D TK90_1070 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D TK90_2138 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D TK90_0413 PhoH family protein K07175 phoH2; PhoH-like ATPase
D TK90_1866 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D TK90_1863 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D TK90_0747 SH3 type 3 domain protein K07184 ygiM; SH3 domain protein
C 99992 Structural proteins
D TK90_1826 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D TK90_0343 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D TK90_0357 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D TK90_2606 15 kDa peptidoglycan-associated lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D TK90_2888 15 kDa peptidoglycan-associated lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D TK90_1488 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D TK90_1285 Peptidase M23 K06194 nlpD; lipoprotein NlpD
D TK90_1086 OmpW family protein K07275 ompW; outer membrane protein
D TK90_2309 protein of unknown function DUF481 K07283 ydiY; putative salt-induced outer membrane protein
D TK90_2347 outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein
D TK90_2348 outer membrane lipoprotein, Slp family K07285 slp; outer membrane lipoprotein
D TK90_2483 AsmA family protein K07289 asmA; AsmA protein
D TK90_2062 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D TK90_0734 XRE family transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D TK90_0953 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D TK90_0437 BFD domain protein (2Fe-2S)-binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D TK90_0286 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D TK90_1982 ApaG domain protein K06195 apaG; ApaG protein
D TK90_0889 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TK90_1329 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D TK90_2371 globin K06886 glbN; hemoglobin
D TK90_2328 globin K06886 glbN; hemoglobin
D TK90_1382 Patatin K07001 K07001; NTE family protein
D TK90_2071 Patatin K07001 K07001; NTE family protein
D TK90_0403 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D TK90_1842 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D TK90_0764 ribonuclease BN K07058 K07058; membrane protein
D TK90_1413 putative phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase
D TK90_0290 FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D TK90_1267 protein of unknown function DUF489 K07153 hflD; high frequency lysogenization protein
D TK90_1073 LemA family protein K03744 lemA; LemA protein
D TK90_0894 SlyX family protein K03745 slyX; SlyX protein
D TK90_2276 protein of unknown function DUF494 K03747 smg; Smg protein
D TK90_0324 protein of unknown function DUF335 SprT K02742 sprT; SprT protein
D TK90_1330 Sporulation domain protein K03749 dedD; DedD protein
D TK90_0266 Sporulation domain protein K03112 damX; DamX protein
D TK90_0486 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D TK90_1609 Ankyrin K06867 K06867; uncharacterized protein
D TK90_0823 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D TK90_0979 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D TK90_1902 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D TK90_1053 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D TK90_2523 hydrolase, exosortase system type 1 associated K06889 K06889; uncharacterized protein
D TK90_0656 GTP-binding protein HSR1-related protein K06946 K06946; uncharacterized protein
D TK90_2122 conserved hypothetical protein K06950 K06950; uncharacterized protein
D TK90_1802 FAD dependent oxidoreductase K06954 K06954; uncharacterized protein
D TK90_0900 peptidase membrane zinc metallopeptidase putative K06973 K06973; uncharacterized protein
D TK90_1767 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein
D TK90_1020 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein
D TK90_0779 protein of unknown function DUF861 cupin_3 K06995 K06995; uncharacterized protein
D TK90_1520 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D TK90_1063 Endonuclease/exonuclease/phosphatase K07004 K07004; uncharacterized protein
D TK90_1298 conserved hypothetical protein K07028 K07028; uncharacterized protein
D TK90_1564 PilT protein domain protein K07064 K07064; uncharacterized protein
D TK90_1699 conserved hypothetical protein K07064 K07064; uncharacterized protein
D TK90_1705 PilT protein domain protein K07064 K07064; uncharacterized protein
D TK90_1104 DNA polymerase beta domain protein region K07075 K07075; uncharacterized protein
D TK90_1890 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D TK90_0845 protein of unknown function DUF897 K07086 K07086; uncharacterized protein
D TK90_0526 permease K07089 K07089; uncharacterized protein
D TK90_0682 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TK90_0183 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TK90_0390 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D TK90_0639 DsrE family protein K07092 K07092; uncharacterized protein
D TK90_1244 conserved hypothetical protein K07092 K07092; uncharacterized protein
D TK90_0511 conserved hypothetical protein K07092 K07092; uncharacterized protein
D TK90_0060 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D TK90_1412 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D TK90_0571 protein of unknown function DUF395 YeeE/YedE K07112 K07112; uncharacterized protein
D TK90_2212 LppC family lipoprotein K07121 K07121; uncharacterized protein
D TK90_1775 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D TK90_0448 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D TK90_1538 AAA family ATPase K07133 K07133; uncharacterized protein
D TK90_2290 protein of unknown function DUF405 K07148 K07148; uncharacterized protein
D TK90_0361 peptidase S16 lon domain protein K07157 K07157; uncharacterized protein
D TK90_2601 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D TK90_2118 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D TK90_1760 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein
D TK90_0692 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein
D TK90_0095 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein
D TK90_0691 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein
D TK90_2301 Domain of unknown function DUF1791 K09004 K09004; uncharacterized protein
D TK90_2294 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D TK90_0270 Protein of unknown function K09117 K09117; uncharacterized protein
D TK90_1056 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D TK90_1968 protein of unknown function DUF493 K09158 K09158; uncharacterized protein
D TK90_0453 protein of unknown function UPF0153 K09160 K09160; uncharacterized protein
D TK90_0420 conserved hypothetical protein K09700 K09700; uncharacterized protein
D TK90_1803 protein of unknown function DUF1365 K09701 K09701; uncharacterized protein
D TK90_1589 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D TK90_1729 YCII-related protein K09780 K09780; uncharacterized protein
D TK90_0595 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D TK90_2424 conserved hypothetical protein K09792 K09792; uncharacterized protein
D TK90_2052 protein of unknown function UPF0125 K09801 K09801; uncharacterized protein
D TK90_1701 protein of unknown function DUF497 K09803 K09803; uncharacterized protein
D TK90_0879 Protein of unknown function DUF2309 K09822 K09822; uncharacterized protein
D TK90_1822 protein of unknown function UPF0149 K09895 K09895; uncharacterized protein
D TK90_0203 protein of unknown function DUF709 K09902 K09902; uncharacterized protein
D TK90_0469 protein of unknown function DUF1043 K09908 K09908; uncharacterized protein
D TK90_0785 Protein of unknown function DUF2058 K09912 K09912; uncharacterized protein
D TK90_1444 protein of unknown function DUF482 K09919 K09919; uncharacterized protein
D TK90_0743 protein of unknown function DUF1249 K09920 K09920; uncharacterized protein
D TK90_0118 putative phytochrome sensor protein K09921 K09921; uncharacterized protein
D TK90_1201 Protein of unknown function DUF2062 K09928 K09928; uncharacterized protein
D TK90_0661 Protein of unknown function DUF2064 K09931 K09931; uncharacterized protein
D TK90_0554 Protein of unknown function DUF2066 K09938 K09938; uncharacterized protein
D TK90_0327 protein of unknown function DUF1244 K09948 K09948; uncharacterized protein
D TK90_0841 Protein of unknown function DUF2237 K09966 K09966; uncharacterized protein
D TK90_0141 Putitive phosphate transport regulator K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024