+D GENES KO #

  KEGG Orthology (KO) - Thiomicrorhabdus lithotrophica

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tlh00010] D NR989_02400 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NR989_02640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NR989_07345 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NR989_03470 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NR989_01490 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NR989_07725 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NR989_01475 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NR989_01480 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NR989_10500 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NR989_05915 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NR989_01485 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NR989_08565 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NR989_06555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NR989_06550 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_11305 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] C 00020 Citrate cycle (TCA cycle) [PATH:tlh00020] D NR989_02125 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D NR989_05235 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NR989_04925 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_06635 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NR989_06640 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NR989_05045 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NR989_05040 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NR989_05055 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NR989_05050 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NR989_04435 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NR989_10105 FAD-dependent oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NR989_06555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NR989_06550 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:tlh00030] D NR989_02640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NR989_11155 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NR989_11150 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D NR989_11160 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NR989_01630 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NR989_01470 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NR989_07295 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_02280 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NR989_08460 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D NR989_01490 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NR989_03470 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NR989_07345 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:tlh00040] D NR989_08900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_02635 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_02645 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NR989_01630 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NR989_05815 FGGY-family carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:tlh00051] D NR989_11135 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NR989_04395 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_10985 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NR989_11175 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D NR989_07345 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NR989_03470 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NR989_01490 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NR989_07725 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:tlh00052] D NR989_02645 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_02400 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NR989_07345 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:tlh00053] D NR989_08900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_02635 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_08895 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:tlh00500] D NR989_11145 glycosyltransferase K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D NR989_11130 alpha-amylase family glycosyl hydrolase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D NR989_02645 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NR989_02405 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NR989_02425 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NR989_02420 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NR989_02430 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NR989_02415 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_02400 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NR989_02640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NR989_11135 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NR989_04395 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tlh00520] D NR989_06115 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NR989_11135 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NR989_04395 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NR989_02435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NR989_07730 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D NR989_11450 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NR989_02130 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D NR989_05530 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D NR989_03075 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D NR989_03080 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D NR989_02835 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NR989_06100 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NR989_02440 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D NR989_02445 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D NR989_02455 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D NR989_02450 acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D NR989_02545 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D NR989_02465 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D NR989_03670 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D NR989_03640 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D NR989_02480 N-acetylneuraminate synthase family protein K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101] D NR989_02400 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_02645 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NR989_08900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_02635 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_08895 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NR989_02640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NR989_10985 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NR989_00715 FAD-binding oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D NR989_02405 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tlh00620] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NR989_06555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NR989_06550 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_01485 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NR989_05935 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NR989_09315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NR989_09320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NR989_07775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NR989_10615 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D NR989_07885 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NR989_06745 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NR989_10600 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D NR989_10105 FAD-dependent oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NR989_04435 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NR989_03460 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NR989_08565 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NR989_08250 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D NR989_00265 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tlh00630] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NR989_02125 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D NR989_05235 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NR989_00410 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D NR989_00405 FAD-binding protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D NR989_00400 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D NR989_01635 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NR989_04035 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NR989_01495 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D NR989_01505 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D NR989_00415 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D NR989_02975 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NR989_06980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NR989_03955 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NR989_03945 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_10050 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NR989_03950 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NR989_01415 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D NR989_00725 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:tlh00640] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_05935 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NR989_09315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NR989_09320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NR989_07775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NR989_06640 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NR989_06635 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NR989_02125 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D NR989_05235 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:tlh00650] D NR989_05045 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NR989_05040 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NR989_05055 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NR989_05050 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NR989_10145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NR989_08675 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D NR989_08135 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_09475 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_00160 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_08130 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tlh00660] D NR989_08135 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_09475 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_00160 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_08130 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NR989_06640 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NR989_06635 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NR989_07825 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NR989_07820 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NR989_07815 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tlh00562] D NR989_08235 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NR989_02880 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NR989_07725 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tlh00190] D NR989_07710 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D NR989_07705 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D NR989_07700 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D NR989_07695 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D NR989_07690 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D NR989_07685 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D NR989_07680 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D NR989_07675 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D NR989_07670 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D NR989_07665 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D NR989_07660 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D NR989_07655 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D NR989_07650 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D NR989_07645 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D NR989_05045 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NR989_05040 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NR989_05055 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NR989_05050 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NR989_02855 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NR989_02860 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NR989_02865 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NR989_01070 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NR989_01075 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NR989_01085 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D NR989_11470 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NR989_11460 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NR989_11465 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NR989_11475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NR989_11455 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NR989_11490 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NR989_11480 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NR989_11485 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NR989_03465 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D NR989_10170 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NR989_09945 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:tlh00710] D NR989_01495 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D NR989_01505 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D NR989_01480 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NR989_01475 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NR989_01490 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NR989_03470 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NR989_01470 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NR989_07295 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NR989_00035 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D NR989_07725 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NR989_01630 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NR989_03460 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NR989_10600 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Other carbon fixation pathways [PATH:tlh00720] D NR989_08565 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NR989_03460 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NR989_04435 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NR989_05045 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NR989_05040 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NR989_05055 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NR989_05050 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NR989_06635 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NR989_06640 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NR989_04925 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NR989_05235 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NR989_05935 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NR989_09315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NR989_09320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NR989_07775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NR989_04120 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NR989_09880 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:tlh00680] D NR989_06980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NR989_00415 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D NR989_05915 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NR989_03460 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NR989_01490 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NR989_03470 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NR989_07345 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NR989_08565 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NR989_10500 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NR989_05545 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NR989_03230 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NR989_03660 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19] C 00910 Nitrogen metabolism [PATH:tlh00910] D NR989_05290 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NR989_05295 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NR989_05300 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NR989_05320 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D NR989_05305 FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D NR989_05310 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D NR989_05315 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D NR989_04210 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NR989_02975 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NR989_10515 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NR989_10520 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NR989_00870 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D NR989_07940 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tlh00920] D NR989_09650 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NR989_08290 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D NR989_08275 soxX; sulfur oxidation c-type cytochrome SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D NR989_08280 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D NR989_05330 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D NR989_08285 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D NR989_05325 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D NR989_07005 5'-nucleotidase C-terminal domain-containing protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D NR989_00820 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC D NR989_00825 cytochrome c K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D NR989_10180 NADP oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D NR989_05410 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D NR989_04650 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D NR989_08085 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D NR989_09410 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D NR989_10265 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D NR989_10275 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D NR989_08080 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase D NR989_09405 cytochrome c K17230 fccA; cytochrome subunit of sulfide dehydrogenase D NR989_10280 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase D NR989_06720 MBL fold metallo-hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D NR989_08725 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NR989_04790 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NR989_08225 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NR989_09975 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NR989_07755 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tlh00061] D NR989_05935 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NR989_09315 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NR989_09320 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NR989_07775 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NR989_04075 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D NR989_04065 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NR989_04060 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NR989_10420 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NR989_04080 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NR989_10590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_04070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_10425 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D NR989_06000 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NR989_05490 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tlh00071] D NR989_00360 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D NR989_00890 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:tlh00074] D NR989_04540 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D NR989_04075 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D NR989_04065 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tlh00561] D NR989_01415 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D NR989_04055 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NR989_09810 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NR989_02160 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NR989_08930 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:tlh00564] D NR989_10480 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NR989_09810 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NR989_02160 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NR989_08930 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D NR989_09845 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D NR989_00360 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D NR989_06025 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NR989_08255 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NR989_06805 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NR989_05255 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D NR989_06795 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D NR989_10505 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:tlh00565] D NR989_09845 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D NR989_09845 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D NR989_09845 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:tlh00592] D NR989_09845 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 01040 Biosynthesis of unsaturated fatty acids D NR989_07965 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tlh00230] D NR989_05625 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NR989_09655 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_02280 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NR989_07760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NR989_09345 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NR989_07235 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NR989_11270 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D NR989_07010 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D NR989_07230 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NR989_09850 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D NR989_09855 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NR989_01620 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NR989_05180 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NR989_09340 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NR989_00665 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NR989_05900 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NR989_09660 yrfG; GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D NR989_07875 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D NR989_06615 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NR989_03250 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NR989_08210 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NR989_10795 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NR989_01560 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NR989_03255 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NR989_11340 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D NR989_09645 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NR989_09690 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NR989_07090 anti-phage deoxyguanosine triphosphatase K01129 dgt; dGTPase [EC:3.1.5.1] D NR989_11370 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NR989_10175 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D NR989_05705 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D NR989_06155 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D NR989_00525 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D NR989_04890 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NR989_10130 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D NR989_10820 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NR989_03050 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] C 00240 Pyrimidine metabolism [PATH:tlh00240] D NR989_04365 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NR989_04360 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NR989_09925 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NR989_06420 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NR989_09930 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NR989_10470 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D NR989_10195 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NR989_05590 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NR989_06040 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NR989_08210 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NR989_08870 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NR989_05925 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D NR989_05570 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D NR989_05900 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NR989_07875 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D NR989_06850 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D NR989_09920 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NR989_10130 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D NR989_07245 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D NR989_09645 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NR989_09690 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NR989_04100 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D NR989_10235 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NR989_08445 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NR989_07130 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tlh00250] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_04495 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NR989_05790 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NR989_08320 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NR989_03310 hypothetical protein K13566 NIT2; omega-amidase [EC:3.5.1.3] D NR989_00415 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D NR989_06800 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NR989_00680 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NR989_04890 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NR989_05180 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NR989_09925 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NR989_10145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NR989_10515 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NR989_10520 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NR989_04210 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NR989_02975 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NR989_04365 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NR989_04360 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NR989_02435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NR989_07760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tlh00260] D NR989_02035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_03375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_07800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NR989_05870 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NR989_00110 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D NR989_05860 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NR989_06980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NR989_00415 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D NR989_01415 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D NR989_10500 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NR989_05545 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NR989_03230 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NR989_07130 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D NR989_03955 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NR989_03945 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_10050 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NR989_03950 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NR989_08255 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NR989_07270 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NR989_07780 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NR989_07425 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NR989_07785 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NR989_03200 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NR989_02045 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D NR989_02050 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D NR989_02040 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:tlh00270] D NR989_08225 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NR989_11290 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NR989_01190 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NR989_09875 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NR989_01680 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D NR989_09675 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D NR989_01685 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NR989_11205 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D NR989_06615 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NR989_07615 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_09210 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_11200 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D NR989_02035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_03375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_07800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NR989_05870 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NR989_09975 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NR989_01610 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D NR989_07755 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NR989_08960 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NR989_09895 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NR989_07255 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NR989_09900 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_08725 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NR989_04790 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NR989_04655 pyridoxal-phosphate dependent enzyme K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D NR989_06160 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D NR989_05545 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:tlh00280] D NR989_08960 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_08675 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tlh00290] D NR989_07270 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NR989_07825 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NR989_07820 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NR989_07815 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D NR989_08135 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_09475 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_00160 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_08130 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NR989_08125 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NR989_08300 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NR989_08960 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NR989_08250 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D NR989_00265 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tlh00300] D NR989_05870 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NR989_02035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_03375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_07800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NR989_07020 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NR989_04325 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NR989_06070 tetrahydrodipicolinate succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D NR989_08965 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NR989_06080 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NR989_02350 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NR989_10035 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NR989_08490 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NR989_08485 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tlh00310] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_10145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NR989_03135 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:tlh00220] D NR989_08970 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D NR989_06800 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NR989_00680 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NR989_04170 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D NR989_04165 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D NR989_02975 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NR989_04365 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NR989_04360 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NR989_04210 Glu/Leu/Phe/Val dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_08305 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D NR989_08350 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D NR989_10220 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D NR989_02115 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D NR989_08965 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:tlh00330] D NR989_01690 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NR989_09675 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D NR989_01685 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NR989_01680 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D NR989_09965 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D NR989_02085 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NR989_09520 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NR989_01140 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_03135 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:tlh00340] D NR989_02840 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D NR989_04885 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D NR989_01045 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D NR989_01405 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D NR989_01055 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D NR989_01060 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D NR989_01050 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D NR989_01065 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D NR989_05555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_08345 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_02845 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:tlh00350] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_05555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_08345 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_05170 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D NR989_10145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:tlh00360] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_05555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_08345 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_03135 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D NR989_08115 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:tlh00380] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_08115 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tlh00400] D NR989_06940 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NR989_11310 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NR989_09310 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D NR989_00805 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D NR989_11315 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D NR989_05565 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D NR989_07895 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D NR989_01645 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NR989_01650 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NR989_01655 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D NR989_07790 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D NR989_01665 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D NR989_07780 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NR989_07425 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NR989_07785 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NR989_03200 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NR989_05550 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_05555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_08345 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tlh00410] D NR989_03455 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D NR989_03440 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D NR989_08635 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tlh00450] D NR989_11290 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NR989_01190 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NR989_08395 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D NR989_03920 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NR989_04970 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D NR989_04835 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tlh00460] D NR989_08635 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NR989_05790 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NR989_06980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tlh00470] D NR989_05620 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NR989_03135 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D NR989_08380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NR989_08475 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NR989_04655 pyridoxal-phosphate dependent enzyme K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D NR989_02350 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NR989_10035 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tlh00480] D NR989_08635 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NR989_09895 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NR989_07255 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NR989_09900 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NR989_02615 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NR989_03515 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NR989_06180 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NR989_00785 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D NR989_04925 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NR989_11160 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NR989_11155 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NR989_01690 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NR989_09675 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D NR989_01685 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tlh00540] D NR989_05995 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NR989_08365 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D NR989_06005 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NR989_06775 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D NR989_05990 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NR989_04690 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D NR989_02380 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NR989_05920 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NR989_02780 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D NR989_11355 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NR989_04700 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NR989_11360 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NR989_02375 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NR989_08950 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NR989_01230 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NR989_11600 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D NR989_02385 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D NR989_02395 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D NR989_02390 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D NR989_02155 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D NR989_08925 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D NR989_08920 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D NR989_08935 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D NR989_08890 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tlh00541] D NR989_02645 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NR989_08900 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_02635 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NR989_08895 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NR989_00715 FAD-binding oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D NR989_10985 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NR989_11450 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NR989_02465 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D NR989_03670 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D NR989_03640 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D NR989_02560 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D NR989_02440 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D NR989_02445 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D NR989_02455 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D NR989_02450 acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D NR989_02545 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] C 00550 Peptidoglycan biosynthesis [PATH:tlh00550] D NR989_02835 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NR989_06100 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NR989_08385 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NR989_08475 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NR989_08490 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NR989_08380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NR989_08485 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NR989_06030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NR989_09835 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NR989_08480 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NR989_08465 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NR989_10810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NR989_03150 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NR989_08495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NR989_03140 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NR989_08530 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:tlh00552] D NR989_09835 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NR989_02560 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tlh00543] D NR989_08225 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tlh00730] D NR989_05350 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D NR989_00755 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D NR989_03475 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NR989_05355 FAD-binding oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D NR989_05365 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D NR989_07305 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D NR989_06945 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D NR989_08155 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NR989_10820 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tlh00740] D NR989_06960 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NR989_06970 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NR989_06955 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D NR989_06965 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D NR989_09465 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D NR989_05625 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:tlh00750] D NR989_07460 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NR989_02195 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NR989_09280 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D NR989_05545 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NR989_03060 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D NR989_04535 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D NR989_05860 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:tlh00760] D NR989_04495 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NR989_06915 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NR989_06585 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NR989_05900 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NR989_09515 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NR989_06630 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NR989_03355 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NR989_04260 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NR989_10145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:tlh00770] D NR989_08135 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_09475 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_00160 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NR989_08130 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NR989_08125 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NR989_08300 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NR989_03435 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D NR989_03440 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NR989_10435 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NR989_10255 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NR989_10365 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NR989_08335 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D NR989_04540 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D NR989_08960 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NR989_03455 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:tlh00780] D NR989_00980 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D NR989_10420 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NR989_04080 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NR989_10590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_04070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_06000 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NR989_05490 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NR989_00985 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D NR989_00995 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NR989_01705 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NR989_01615 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D NR989_01000 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D NR989_04200 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tlh00785] D NR989_03125 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D NR989_03120 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_06555 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NR989_06550 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NR989_03955 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D NR989_03945 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NR989_10050 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NR989_03950 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tlh00790] D NR989_10115 folE2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D NR989_09815 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NR989_03430 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NR989_07735 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NR989_08440 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NR989_07770 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D NR989_06960 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NR989_04085 aminodeoxychorismate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D NR989_04090 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D NR989_10100 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D NR989_04475 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NR989_08150 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NR989_07830 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NR989_06865 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NR989_11540 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NR989_00830 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NR989_00850 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NR989_00840 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NR989_07950 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D NR989_00845 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D NR989_01400 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tlh00670] D NR989_08440 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NR989_10100 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D NR989_04120 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NR989_06980 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NR989_07235 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NR989_09340 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NR989_01275 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NR989_03945 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D NR989_01190 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NR989_08445 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NR989_00725 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D NR989_09880 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NR989_07070 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tlh00860] D NR989_05730 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NR989_02265 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D NR989_07310 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NR989_00810 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NR989_00690 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D NR989_00695 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D NR989_10745 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D NR989_00060 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D NR989_09425 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NR989_06225 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D NR989_07485 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NR989_10090 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NR989_05335 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D NR989_04710 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NR989_04715 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D NR989_07000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D NR989_10020 HugZ family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D NR989_01540 ferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tlh00130] D NR989_11410 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D NR989_11440 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NR989_07045 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D NR989_05535 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D NR989_07050 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D NR989_02335 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D NR989_06165 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tlh00900] D NR989_08675 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D NR989_08665 hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D NR989_08680 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D NR989_08685 GHMP kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D NR989_08690 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D NR989_08670 fni; type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D NR989_04480 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D NR989_02065 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NR989_06030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NR989_08145 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NR989_01470 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D NR989_02675 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:tlh00332] D NR989_02085 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NR989_09520 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tlh00261] D NR989_02675 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D NR989_02035 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_03375 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NR989_07800 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NR989_07020 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NR989_04325 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tlh00521] D NR989_02400 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NR989_10660 pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NR989_02630 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NR989_08235 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NR989_02880 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D NR989_02400 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:tlh00401] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_05555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_08345 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D NR989_01645 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NR989_01650 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NR989_04065 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NR989_10590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_04070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_05490 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NR989_04075 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tlh00999] D NR989_09875 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NR989_00805 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:tlh00633] D NR989_06400 nfsB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D NR989_06310 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation [PATH:tlh00791] D NR989_04165 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D NR989_04170 uca; urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tlh03020] D NR989_01770 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NR989_01775 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NR989_01925 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NR989_11365 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tlh03010] D NR989_05575 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NR989_06050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NR989_01835 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NR989_01920 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NR989_01890 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NR989_05595 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NR989_01785 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NR989_01875 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NR989_09615 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NR989_01800 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NR989_01915 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NR989_01780 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NR989_01910 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NR989_01870 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NR989_05155 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NR989_02900 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NR989_01850 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NR989_05600 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NR989_01825 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NR989_09495 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NR989_09800 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NR989_01755 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NR989_01820 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NR989_01805 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NR989_01810 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NR989_01865 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NR989_01880 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NR989_01765 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NR989_05610 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NR989_01760 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NR989_01750 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NR989_09620 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NR989_01855 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NR989_01900 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NR989_01840 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NR989_01930 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NR989_01885 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NR989_02915 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NR989_08010 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NR989_02070 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NR989_01830 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NR989_01815 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NR989_01860 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NR989_02285 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NR989_02075 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NR989_10310 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NR989_01845 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NR989_01895 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NR989_10735 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NR989_04050 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NR989_10315 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NR989_11700 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NR989_08015 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NR989_05975 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:tlh00970] D NR989_05260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NR989_05715 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NR989_08850 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NR989_11565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NR989_10455 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NR989_02710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NR989_07715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NR989_09780 tRNA-Ile K14230 tRNA-Met; tRNA Met D NR989_02705 tRNA-Val K14237 tRNA-Val; tRNA Val D NR989_05465 tRNA-Val K14237 tRNA-Val; tRNA Val D NR989_05475 tRNA-Val K14237 tRNA-Val; tRNA Val D NR989_05730 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NR989_03175 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NR989_03180 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NR989_03170 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NR989_04755 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NR989_03370 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NR989_06920 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NR989_02145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NR989_02150 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NR989_08025 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NR989_03965 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NR989_06760 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NR989_04835 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NR989_01275 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NR989_02935 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NR989_09535 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NR989_09460 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NR989_04460 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NR989_01300 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NR989_07140 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NR989_08195 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NR989_08005 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NR989_08000 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NR989_10465 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NR989_03400 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tlh03060] D NR989_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NR989_01740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NR989_07720 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NR989_02735 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NR989_02740 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NR989_02730 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NR989_11690 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NR989_08355 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NR989_10485 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NR989_02895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NR989_10405 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NR989_01035 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D NR989_01030 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NR989_01025 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NR989_04515 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NR989_09455 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tlh04122] D NR989_08725 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NR989_04790 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NR989_04915 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NR989_00840 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NR989_00830 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NR989_00835 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D NR989_02250 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D NR989_00850 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NR989_07950 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D NR989_03475 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NR989_05360 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:tlh03018] D NR989_06560 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NR989_04025 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D NR989_05915 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NR989_05160 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NR989_04410 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NR989_05225 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NR989_03490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NR989_00865 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NR989_00180 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NR989_10730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NR989_04315 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NR989_02095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NR989_04860 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NR989_10170 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NR989_09945 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D NR989_03425 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tlh03030] D NR989_06730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08615 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_05115 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_05065 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NR989_08985 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NR989_04105 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NR989_09525 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NR989_02610 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NR989_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NR989_05615 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NR989_09790 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NR989_01970 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NR989_06735 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NR989_04785 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NR989_04965 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NR989_05985 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NR989_00115 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NR989_05805 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tlh03410] D NR989_04800 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NR989_02190 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NR989_10760 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NR989_10330 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NR989_00720 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NR989_10190 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D NR989_00115 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NR989_05855 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NR989_05805 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tlh03420] D NR989_05400 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NR989_01955 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NR989_02580 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NR989_05250 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NR989_10720 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NR989_00115 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NR989_05805 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tlh03430] D NR989_03350 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NR989_04850 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NR989_10720 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NR989_05695 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NR989_05690 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NR989_05855 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NR989_01970 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NR989_05065 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NR989_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NR989_08985 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NR989_09525 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NR989_04105 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NR989_06730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08615 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_05115 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_02610 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NR989_05805 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NR989_09240 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:tlh03440] D NR989_05855 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NR989_01970 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NR989_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NR989_04530 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NR989_08975 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NR989_03360 recA; recombinase RecA K03553 recA; recombination protein RecA D NR989_00115 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NR989_06905 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NR989_06900 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NR989_06910 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NR989_11405 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NR989_05065 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NR989_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NR989_08985 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NR989_09525 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NR989_04105 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NR989_06730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08615 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_05115 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_02610 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NR989_00955 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tlh02010] D NR989_07360 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D NR989_05290 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NR989_05295 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NR989_05300 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NR989_10350 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D NR989_01150 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein D NR989_10345 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D NR989_10340 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D NR989_02665 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D NR989_02660 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D NR989_02655 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D NR989_02810 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D NR989_02805 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NR989_02800 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NR989_02815 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D NR989_02795 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NR989_03015 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D NR989_02980 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D NR989_02985 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NR989_02990 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NR989_08420 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D NR989_08430 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D NR989_08425 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NR989_07840 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D NR989_07850 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D NR989_07855 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D NR989_07845 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D NR989_05420 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D NR989_05425 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NR989_09370 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D NR989_09365 heme ABC transporter permease K02195 ccmC; heme exporter protein C D NR989_09360 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NR989_09355 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NR989_02620 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NR989_02625 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D NR989_02765 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NR989_08945 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D NR989_01345 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:tlh03070] D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein D NR989_11435 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D NR989_08825 mshL; pilus (MSHA type) biogenesis protein MshL K02453 gspD; general secretion pathway protein D D NR989_10975 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D NR989_10980 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D NR989_10965 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D NR989_10960 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D NR989_10950 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D NR989_10945 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D NR989_10940 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D NR989_10935 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D NR989_10930 type II secretion system protein M K02462 gspM; general secretion pathway protein M D NR989_08815 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NR989_10860 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NR989_10970 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NR989_02735 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NR989_02740 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NR989_01740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NR989_07720 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NR989_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NR989_02730 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NR989_11690 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NR989_08355 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NR989_10405 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NR989_10485 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NR989_02895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NR989_01035 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D NR989_01030 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NR989_01025 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:tlh02020] D NR989_03005 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NR989_07370 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NR989_03000 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NR989_03015 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D NR989_04505 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NR989_04285 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D NR989_04290 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D NR989_02940 flagellin K02406 fliC; flagellin D NR989_03685 flagellin K02406 fliC; flagellin D NR989_03690 flagellin K02406 fliC; flagellin D NR989_03840 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D NR989_02165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_02240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_03445 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_03775 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_10915 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D NR989_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NR989_03380 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D NR989_11255 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D NR989_11245 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D NR989_11240 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC D NR989_11235 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D NR989_11230 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NR989_11225 type II secretion system F family protein K12510 tadB; tight adherence protein B D NR989_11220 type II secretion system F family protein K12511 tadC; tight adherence protein C D NR989_06060 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D NR989_06830 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NR989_06825 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NR989_02975 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NR989_01260 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NR989_01255 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D NR989_00895 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein D NR989_05670 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NR989_03890 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NR989_05485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_06170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_06695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_08435 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_08455 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_10690 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_00170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_00395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_02180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_03900 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_03860 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_03880 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_04470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03855 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_08545 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03845 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03875 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_04895 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03895 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NR989_05980 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03565 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03725 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NR989_03730 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NR989_11395 HD domain-containing protein K13815 rpfG; two-component system, response regulator RpfG D NR989_09585 response regulator K15012 regA; two-component system, response regulator RegA D NR989_02855 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NR989_02860 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NR989_02865 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NR989_01070 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NR989_01075 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NR989_01085 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein D NR989_04020 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D NR989_01125 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D NR989_04780 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D NR989_04840 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D NR989_03555 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:tlh04148] D NR989_01690 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NR989_02855 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tlh02024] D NR989_11200 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D NR989_04860 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NR989_01645 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NR989_01650 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NR989_06940 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NR989_04150 N-acyl homoserine lactonase family protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81] D NR989_11395 HD domain-containing protein K13815 rpfG; two-component system, response regulator RpfG D NR989_06970 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NR989_02005 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NR989_05495 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NR989_06145 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NR989_05500 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D NR989_06130 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D NR989_05505 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NR989_06125 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NR989_05510 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D NR989_11690 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NR989_01740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NR989_07720 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NR989_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NR989_02730 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NR989_08355 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NR989_10405 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NR989_10485 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NR989_02895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tlh02030] D NR989_05485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_06170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_06695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_08435 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_08455 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_10690 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_00170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_00395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_02180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_03900 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03855 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03860 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_03880 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_04470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_08545 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03845 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03875 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_04895 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03850 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D NR989_03895 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NR989_05980 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03565 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03265 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D NR989_03890 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NR989_03745 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NR989_03790 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D NR989_03795 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NR989_02165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_02240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_03445 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_03775 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_02170 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02175 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02245 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_03450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_03780 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tlh02040] D NR989_03735 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NR989_03740 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NR989_03745 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NR989_03750 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D NR989_03755 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NR989_03760 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D NR989_02950 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NR989_03785 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NR989_03790 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D NR989_03795 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NR989_03800 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NR989_03805 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NR989_03810 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NR989_03815 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NR989_03825 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NR989_03820 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D NR989_03560 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D NR989_03575 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D NR989_03580 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NR989_03585 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D NR989_03590 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D NR989_03595 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NR989_03600 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NR989_03605 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NR989_03610 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NR989_03620 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D NR989_03625 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D NR989_03535 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D NR989_02940 flagellin K02406 fliC; flagellin D NR989_03685 flagellin K02406 fliC; flagellin D NR989_03690 flagellin K02406 fliC; flagellin D NR989_03705 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D NR989_11275 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D NR989_03710 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D NR989_02165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_02240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_03445 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_03775 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_02170 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02175 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02245 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_03450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_03780 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_03555 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NR989_09785 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NR989_05670 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NR989_03730 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NR989_03840 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NR989_05915 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D NR989_01190 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tlh01501] D NR989_06115 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D NR989_00485 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_02015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_00480 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_02010 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_02005 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein D NR989_10810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NR989_03150 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NR989_08495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tlh01502] D NR989_08380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NR989_05620 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NR989_08485 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NR989_08480 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NR989_08465 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tlh01503] D NR989_07075 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NR989_04505 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NR989_00155 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D NR989_00485 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_02015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_00480 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_02010 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein D NR989_05995 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tlh01000] C 01001 Protein kinases [BR:tlh01001] D NR989_04960 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D NR989_03005 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NR989_04285 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D NR989_06830 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NR989_01260 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NR989_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03855 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03725 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NR989_10920 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS C 01009 Protein phosphatases and associated proteins [BR:tlh01009] D NR989_03285 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NR989_03230 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:tlh01002] D NR989_09455 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D NR989_06930 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NR989_03255 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NR989_04340 NlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC D NR989_07760 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NR989_10515 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NR989_02435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NR989_08320 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NR989_09760 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D NR989_03515 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NR989_00325 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D NR989_05165 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D NR989_10395 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NR989_10400 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D NR989_02615 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NR989_06080 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NR989_06055 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NR989_07055 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NR989_07740 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NR989_08145 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D NR989_03185 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D NR989_08270 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D NR989_06020 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D NR989_04955 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D NR989_04505 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NR989_03140 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NR989_08530 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NR989_05445 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NR989_05455 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NR989_07955 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NR989_05785 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NR989_10060 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D NR989_04515 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NR989_01140 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D NR989_09765 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NR989_10610 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D NR989_05245 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D NR989_02365 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D NR989_08635 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NR989_06190 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D NR989_04875 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D NR989_04870 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:tlh01003] D NR989_08775 glycosyltransferase family 2 protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D NR989_02425 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NR989_10810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NR989_11170 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tlh01005] D NR989_05995 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NR989_05990 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NR989_08365 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D NR989_06005 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NR989_06775 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D NR989_04690 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D NR989_08950 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NR989_01230 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NR989_11600 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D NR989_11360 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NR989_02375 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NR989_02385 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D NR989_11345 DegT/DnrJ/EryC1/StrS family aminotransferase K19715 kdnA; 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:2.6.1.109] D NR989_11350 iron-containing alcohol dehydrogenase family protein K19714 kdnB; 3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:1.1.3.48] D NR989_05920 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NR989_11355 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NR989_04700 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NR989_02780 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D NR989_02380 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NR989_08920 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D NR989_08890 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D NR989_08935 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D NR989_02395 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D NR989_02155 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D NR989_02390 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D NR989_08925 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D NR989_02555 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tlh01011] D NR989_02835 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NR989_06100 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NR989_08385 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NR989_08475 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NR989_08490 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NR989_08380 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NR989_05620 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NR989_08480 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NR989_08465 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NR989_09835 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NR989_09470 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NR989_10810 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NR989_03150 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NR989_08495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NR989_03140 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NR989_08530 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NR989_06755 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NR989_09435 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D NR989_00450 murein transglycosylase domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D NR989_03630 murein transglycosylase domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D NR989_06750 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D NR989_04095 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D NR989_07075 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NR989_06580 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tlh01004] D NR989_04065 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NR989_04060 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NR989_10420 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NR989_04080 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NR989_10590 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_04070 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NR989_10425 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D NR989_06000 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NR989_05490 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NR989_07965 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NR989_05095 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NR989_04055 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NR989_09810 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NR989_02160 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tlh01008] D NR989_02675 alpha-hydroxy-acid oxidizing protein K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:tlh01006] D NR989_04480 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D NR989_02065 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NR989_06030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NR989_04855 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NR989_06165 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D NR989_11440 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:tlh01007] D NR989_05730 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NR989_04755 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NR989_10465 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NR989_03400 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NR989_06760 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NR989_01300 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NR989_04835 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NR989_09460 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NR989_02935 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NR989_09535 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NR989_04460 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NR989_06920 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NR989_08195 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NR989_02145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NR989_02150 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NR989_03965 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NR989_07140 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NR989_08025 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NR989_03370 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NR989_08005 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NR989_08000 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NR989_02575 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NR989_05875 alaC; alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D NR989_05555 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_08345 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NR989_00995 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NR989_11290 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NR989_08965 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D NR989_02045 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D NR989_01705 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NR989_07310 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NR989_03135 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D NR989_08960 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NR989_00415 alanine--glyoxylate aminotransferase family protein K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D NR989_05545 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NR989_02455 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:tlh00194] D NR989_11455 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NR989_11460 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NR989_11465 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NR989_11470 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NR989_11475 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NR989_11480 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NR989_11485 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NR989_11490 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NR989_11500 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tlh03000] D NR989_07615 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_09210 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_00190 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NR989_01570 LysR substrate-binding domain-containing protein K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D NR989_00260 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NR989_07500 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D NR989_04250 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NR989_03505 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NR989_08220 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D NR989_00285 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D NR989_06835 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D NR989_04200 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NR989_06535 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D NR989_00895 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein D NR989_09630 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D NR989_10355 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein D NR989_11115 helix-turn-helix domain-containing protein K07727 K07727; putative transcriptional regulator D NR989_04185 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D NR989_03040 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D NR989_11505 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NR989_04265 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D NR989_09920 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NR989_09205 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D NR989_09910 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D NR989_05830 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NR989_06975 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D NR989_09145 Cro/CI family transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D NR989_08515 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tlh03021] D NR989_01925 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NR989_01770 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NR989_01775 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NR989_11365 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NR989_09785 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NR989_09710 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NR989_11020 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NR989_00345 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NR989_11280 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D NR989_05670 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NR989_03840 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D NR989_05125 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NR989_06950 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NR989_01745 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NR989_08700 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D NR989_08695 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D NR989_04500 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC D NR989_05830 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NR989_04370 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D NR989_04625 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D NR989_10730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tlh03019] D NR989_04025 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D NR989_08865 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D NR989_04520 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NR989_03490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NR989_08140 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D NR989_04410 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NR989_05225 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NR989_00865 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NR989_00180 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NR989_05915 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NR989_05160 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NR989_10730 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D NR989_04315 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NR989_02095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NR989_04860 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NR989_10170 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NR989_09945 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D NR989_03425 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D NR989_06560 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NR989_03380 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator D NR989_06715 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D NR989_04205 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:tlh03011] D NR989_05575 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NR989_06050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NR989_01835 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NR989_01920 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NR989_01890 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NR989_05595 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NR989_01785 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NR989_01875 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NR989_09615 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NR989_01800 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NR989_01915 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NR989_01780 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NR989_01910 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NR989_01870 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NR989_05155 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NR989_02900 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NR989_01850 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NR989_05600 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NR989_01825 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NR989_09495 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NR989_09800 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NR989_01755 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NR989_01820 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NR989_01805 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NR989_01810 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NR989_01865 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NR989_01880 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NR989_05610 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NR989_01760 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NR989_01750 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NR989_01765 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NR989_09620 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NR989_01855 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NR989_01900 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NR989_01840 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NR989_01930 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NR989_01885 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NR989_02915 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NR989_08010 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NR989_02070 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NR989_01830 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NR989_01815 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NR989_01860 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NR989_02075 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NR989_10310 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NR989_01845 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NR989_01895 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NR989_10735 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NR989_04050 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NR989_10315 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NR989_11700 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NR989_08015 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NR989_05975 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NR989_02285 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 C 03009 Ribosome biogenesis [BR:tlh03009] D NR989_04520 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NR989_04960 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D NR989_08140 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D NR989_04525 era; GTPase Era K03595 era; GTPase D NR989_02080 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D NR989_05830 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NR989_05125 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NR989_06950 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NR989_01745 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NR989_00675 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D NR989_03055 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NR989_01270 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NR989_01375 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D NR989_10370 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NR989_09885 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D NR989_11515 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NR989_08510 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NR989_08550 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NR989_08540 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D NR989_03495 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NR989_07745 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D NR989_09505 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D NR989_10045 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D NR989_07185 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D NR989_09430 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D NR989_08205 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NR989_07835 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NR989_06250 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NR989_04015 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NR989_05755 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D NR989_04030 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D NR989_06620 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NR989_08605 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NR989_04920 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D NR989_06700 rluF; 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D NR989_03085 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D NR989_08240 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D NR989_10995 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D NR989_02905 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D NR989_06210 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NR989_05945 ycaO; 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D NR989_09325 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D NR989_07945 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D NR989_05175 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D NR989_04025 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D NR989_08865 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D NR989_09915 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NR989_04765 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D NR989_00865 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NR989_10135 DEAD/DEAH box helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D NR989_08155 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NR989_08180 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D NR989_07180 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D NR989_04865 hflX; GTPase HflX K03665 hflX; GTPase D NR989_00105 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NR989_11370 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NR989_05135 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D NR989_05120 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D NR989_09510 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D NR989_09555 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D NR989_07750 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D NR989_05800 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D NR989_02760 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D NR989_02295 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D NR989_04045 YceD family protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tlh03016] D NR989_01455 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D NR989_05730 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NR989_07140 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NR989_09460 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NR989_09535 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NR989_04835 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NR989_04755 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NR989_01300 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NR989_04460 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NR989_06920 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NR989_03370 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NR989_08025 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NR989_03965 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NR989_06760 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NR989_02935 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NR989_08195 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NR989_08005 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NR989_08000 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NR989_10465 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NR989_03400 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NR989_01135 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D NR989_01040 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NR989_10765 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NR989_06300 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D NR989_07795 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NR989_05140 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NR989_01390 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D NR989_00105 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NR989_04855 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NR989_11680 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NR989_11520 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NR989_04970 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D NR989_09650 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NR989_11695 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D NR989_08310 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D NR989_07340 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D NR989_05090 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D NR989_06985 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D NR989_02145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NR989_02150 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NR989_03260 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NR989_05700 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D NR989_09330 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NR989_09565 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NR989_00445 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D NR989_00430 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D NR989_01195 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D NR989_02910 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NR989_08230 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D NR989_10475 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D NR989_01710 pseudouridine synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D NR989_06250 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NR989_04015 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NR989_04915 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NR989_01225 tRNA 2-thiocytidine biosynthesis TtcA family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D NR989_08215 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D NR989_04465 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ D NR989_00740 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D NR989_02720 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NR989_06865 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NR989_04475 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D NR989_07830 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NR989_11540 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NR989_07085 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D NR989_04975 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D NR989_02725 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NR989_03475 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NR989_05930 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D NR989_00730 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D NR989_05965 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D NR989_09805 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NR989_07080 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NR989_01940 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D NR989_03490 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NR989_05160 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:tlh03012] D NR989_05130 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NR989_08020 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NR989_05430 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D NR989_06045 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NR989_01730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NR989_01795 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NR989_01790 fusA; elongation factor G K02355 fusA; elongation factor G D NR989_02260 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D NR989_06035 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D NR989_02255 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D NR989_02290 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NR989_05035 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NR989_08715 efp; elongation factor P K02356 efp; elongation factor P D NR989_10675 yeiP; elongation factor P-like protein YeiP K02356 efp; elongation factor P D NR989_08710 epmA; EF-P lysine aminoacylase EpmA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D NR989_08720 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D NR989_07315 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D NR989_04455 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D NR989_02745 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D NR989_07265 arfB; aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:tlh03110] D NR989_05025 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D NR989_09415 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NR989_05450 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NR989_02345 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D NR989_03285 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NR989_04315 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NR989_02095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NR989_04320 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NR989_10645 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D NR989_05015 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D NR989_07930 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein D NR989_03115 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D NR989_04310 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NR989_00025 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D NR989_00055 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D NR989_02090 co-chaperone GroES K04078 groES; chaperonin GroES D NR989_04505 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NR989_07740 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NR989_11490 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NR989_10485 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NR989_07285 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D NR989_06765 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D NR989_06770 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D NR989_04900 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D NR989_03320 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D NR989_03915 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D NR989_06650 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D NR989_06230 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D NR989_06235 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D NR989_06725 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D NR989_08660 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D NR989_04750 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D NR989_03065 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D NR989_10725 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D NR989_04430 trxA; thioredoxin K03671 TXN; thioredoxin D NR989_00600 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D NR989_03345 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D NR989_04305 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D NR989_10490 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D NR989_08315 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NR989_00155 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D NR989_02925 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D NR989_09305 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D NR989_09385 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:tlh04131] D NR989_08210 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NR989_01475 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NR989_01485 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NR989_03285 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:tlh03051] D NR989_03285 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:tlh03032] D NR989_06735 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NR989_04785 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NR989_04965 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NR989_07615 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_09210 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_05460 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NR989_07995 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NR989_05580 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NR989_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NR989_05615 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NR989_09790 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NR989_01970 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NR989_05065 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NR989_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NR989_02610 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NR989_09525 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NR989_04105 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NR989_06730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08615 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_05115 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08985 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NR989_05985 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NR989_00115 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NR989_05805 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NR989_09240 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NR989_07220 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D NR989_05540 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NR989_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NR989_02235 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NR989_02200 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NR989_01295 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tlh03036] D NR989_07615 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_09210 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_04520 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NR989_05460 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NR989_07995 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NR989_05580 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NR989_10645 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D NR989_05015 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D NR989_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NR989_04860 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D NR989_00260 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NR989_08370 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D NR989_05910 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D NR989_08495 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NR989_03925 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D NR989_08500 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D NR989_08375 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D NR989_08470 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D NR989_08505 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NR989_07065 cell division protein ZapA K09888 zapA; cell division protein ZapA D NR989_07075 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NR989_00485 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_02015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_05390 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D NR989_03165 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NR989_03160 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D NR989_03155 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D NR989_03145 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D NR989_11510 AAA family ATPase K03496 parA; chromosome partitioning protein D NR989_11505 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NR989_02235 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NR989_02200 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NR989_11520 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NR989_11515 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NR989_02360 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D NR989_02920 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D NR989_04845 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D NR989_03995 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D NR989_00140 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tlh03400] D NR989_03970 MGMT family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D NR989_07435 DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NR989_07505 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NR989_04575 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NR989_02190 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D NR989_10760 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NR989_04800 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NR989_08340 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NR989_10235 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NR989_04565 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D NR989_10330 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NR989_00720 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D NR989_10190 nfo; deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D NR989_05855 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NR989_05805 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NR989_00115 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NR989_01955 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NR989_02580 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NR989_05250 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NR989_10720 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NR989_01770 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NR989_01775 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NR989_01925 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NR989_11365 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NR989_05400 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NR989_03350 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NR989_04850 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NR989_05695 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NR989_05690 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NR989_05065 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NR989_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NR989_02610 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NR989_09525 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NR989_04105 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NR989_06730 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08615 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_05115 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NR989_08985 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NR989_01970 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NR989_09240 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NR989_03360 recA; recombinase RecA K03553 recA; recombination protein RecA D NR989_06905 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NR989_06900 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NR989_06910 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NR989_00955 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NR989_02870 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NR989_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NR989_11405 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NR989_04530 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NR989_08975 recR; recombination mediator RecR K06187 recR; recombination protein RecR D NR989_04255 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D NR989_05540 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NR989_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NR989_01295 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NR989_05460 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NR989_07995 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NR989_05580 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NR989_00180 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NR989_10065 Y-family DNA polymerase K03502 umuC; DNA polymerase V D NR989_10060 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D NR989_05785 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NR989_03365 recombination regulator RecX K03565 recX; regulatory protein D NR989_01370 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D NR989_05970 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D NR989_09645 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NR989_09690 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:tlh03029] D NR989_02860 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NR989_05130 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NR989_08020 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NR989_06045 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts D NR989_01730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NR989_01795 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NR989_01790 fusA; elongation factor G K02355 fusA; elongation factor G D NR989_04525 era; GTPase Era K03595 era; GTPase D NR989_10465 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NR989_09535 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NR989_06920 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NR989_01300 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NR989_03175 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NR989_03180 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NR989_03170 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NR989_00460 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D NR989_01970 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NR989_06015 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NR989_04315 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NR989_04310 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NR989_02095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NR989_02090 co-chaperone GroES K04078 groES; chaperonin GroES D NR989_04320 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NR989_06720 MBL fold metallo-hydrolase K17725 ETHE1; sulfur dioxygenase [EC:1.13.11.18] D NR989_08315 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NR989_04845 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D NR989_11690 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NR989_07280 SCO family protein K07152 SCO1; protein SCO1 D NR989_02185 SCO family protein K07152 SCO1; protein SCO1 D NR989_03285 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tlh02000] D NR989_08945 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D NR989_02460 ABC transporter ATP-binding protein/permease K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D NR989_01345 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NR989_04115 ABC transporter ATP-binding protein/permease K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D NR989_09680 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D NR989_10350 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D NR989_01150 substrate-binding domain-containing protein K02020 modA; molybdate transport system substrate-binding protein D NR989_10345 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D NR989_10340 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D NR989_07360 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D NR989_05290 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NR989_05295 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NR989_05300 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NR989_02665 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D NR989_02660 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D NR989_02655 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D NR989_00515 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NR989_00915 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NR989_04140 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NR989_00910 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D NR989_04195 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D NR989_00920 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NR989_04190 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NR989_10710 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D NR989_10715 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D NR989_02805 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NR989_02800 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NR989_02795 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NR989_02810 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D NR989_02815 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D NR989_03015 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D NR989_02980 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D NR989_02985 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NR989_02990 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NR989_05495 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NR989_06145 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D NR989_05500 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D NR989_06130 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D NR989_05505 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NR989_06125 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D NR989_05510 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D NR989_09720 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D NR989_09715 ATP-binding cassette domain-containing protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D NR989_04705 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NR989_08420 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D NR989_08430 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D NR989_08425 ATP-binding cassette domain-containing protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NR989_07840 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D NR989_07850 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D NR989_07855 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D NR989_07845 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D NR989_02620 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NR989_02625 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D NR989_02765 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NR989_05420 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D NR989_05425 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NR989_09370 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D NR989_09365 heme ABC transporter permease K02195 ccmC; heme exporter protein C D NR989_09360 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NR989_09355 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NR989_11605 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NR989_02825 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NR989_02820 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NR989_07975 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D NR989_11325 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D NR989_04600 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D NR989_07970 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NR989_11320 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NR989_04605 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NR989_08405 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D NR989_05635 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D NR989_06450 OFA family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D NR989_07890 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D NR989_00315 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D NR989_10825 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D NR989_07040 potassium channel family protein K10716 kch; voltage-gated potassium channel D NR989_03025 ion transporter K08714 VGSC; voltage-gated sodium channel D NR989_07170 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D NR989_02955 ammonium transporter K03320 amt; ammonium transporter, Amt family D NR989_04660 ammonium transporter K03320 amt; ammonium transporter, Amt family D NR989_06180 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NR989_08700 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D NR989_00370 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NR989_00375 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NR989_00580 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NR989_00585 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NR989_10285 mechanosensitive ion channel K05802 mscK; potassium-dependent mechanosensitive channel D NR989_10215 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D NR989_06110 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D NR989_11005 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D NR989_02755 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D NR989_02165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_02240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_03445 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_03775 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_02170 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02175 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02245 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_03450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_03780 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_02700 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NR989_03220 exbB; TonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB D NR989_02690 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NR989_02695 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NR989_03215 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NR989_06895 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D NR989_06890 ExbD/TolR family protein K03560 tolR; biopolymer transport protein TolR D NR989_01700 zinc transporter ZntB K16074 zntB; zinc transporter D NR989_03940 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D NR989_11010 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NR989_02885 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D NR989_10205 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NR989_11035 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NR989_01360 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NR989_09290 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D NR989_02875 OmpP1/FadL family transporter K06076 fadL; long-chain fatty acid transport protein D NR989_02680 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D NR989_04720 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D NR989_07275 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NR989_10650 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NR989_00095 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein D NR989_01330 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D NR989_02005 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NR989_06015 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NR989_08185 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D NR989_07015 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D NR989_06625 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D NR989_04245 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D NR989_07145 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D NR989_02770 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D NR989_02775 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D NR989_03070 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein D NR989_09530 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D NR989_09550 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D NR989_01010 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NR989_01600 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NR989_00480 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_02010 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_05735 SLAC1 anion channel family protein K03304 tehA; tellurite resistance protein D NR989_08100 SLAC1 anion channel family protein K03304 tehA; tellurite resistance protein D NR989_05520 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D NR989_02785 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D NR989_02025 sodium/proline symporter K11928 putP; sodium/proline symporter D NR989_05105 cation acetate symporter K14393 actP; cation/acetate symporter D NR989_06590 monovalent cation:proton antiporter-2 (CPA2) family protein K03455 KEA1_2_3; K+:H+ antiporter D NR989_01245 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D NR989_01250 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D NR989_07870 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D NR989_01945 dauA; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D NR989_00280 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D NR989_00200 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D NR989_00205 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D NR989_00210 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D NR989_00215 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D NR989_00220 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D NR989_00225 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D NR989_09470 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NR989_03030 VIT family protein K22736 VIT; vacuolar iron transporter family protein D NR989_04400 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein D NR989_08470 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D NR989_02685 energy transducer TonB K03832 tonB; periplasmic protein TonB D NR989_03210 energy transducer TonB K03832 tonB; periplasmic protein TonB D NR989_06875 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D NR989_03510 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D NR989_06885 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D NR989_06880 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D NR989_01595 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NR989_11435 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D NR989_01340 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D NR989_00485 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_02015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_08055 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D NR989_09990 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D NR989_09995 feoB; Fe(2+) transporter permease subunit FeoB K04759 feoB; ferrous iron transport protein B D NR989_09380 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:tlh02044] D NR989_11435 HlyD family type I secretion periplasmic adaptor subunit K11003 hlyD; membrane fusion protein, hemolysin D D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein D NR989_01345 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D NR989_01340 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D NR989_01330 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D NR989_10865 AAA family ATPase K02450 gspA; general secretion pathway protein A D NR989_10980 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D NR989_08825 mshL; pilus (MSHA type) biogenesis protein MshL K02453 gspD; general secretion pathway protein D D NR989_10975 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D NR989_08815 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NR989_10860 ATPase, T2SS/T4P/T4SS family K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NR989_10970 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NR989_10965 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D NR989_10960 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D NR989_10950 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D NR989_10945 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D NR989_10940 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D NR989_10935 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D NR989_10930 type II secretion system protein M K02462 gspM; general secretion pathway protein M D NR989_06930 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NR989_08810 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D NR989_10855 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D NR989_02605 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D NR989_02600 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D NR989_10955 prepilin-type N-terminal cleavage/methylation domain-containing protein K08085 fimU; type IV fimbrial biogenesis protein FimU D NR989_11245 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D NR989_11240 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC D NR989_11235 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D NR989_11230 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D NR989_11225 type II secretion system F family protein K12510 tadB; tight adherence protein B D NR989_11220 type II secretion system F family protein K12511 tadC; tight adherence protein C D NR989_11255 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D NR989_08830 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM D NR989_09970 YggT family protein K02221 yggT; YggT family protein D NR989_02565 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D NR989_04685 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D NR989_03825 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NR989_03820 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D NR989_03865 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D NR989_03740 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NR989_03750 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D NR989_03755 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NR989_03795 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NR989_03800 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NR989_03805 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NR989_03810 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NR989_03815 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NR989_02925 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D NR989_08355 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NR989_10485 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NR989_02735 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NR989_01740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NR989_02740 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NR989_07720 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NR989_01905 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NR989_02895 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NR989_10405 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NR989_02730 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NR989_11690 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NR989_01035 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D NR989_01030 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NR989_01025 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tlh02042] D NR989_11010 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D NR989_02885 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:tlh02022] D NR989_03005 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NR989_07370 response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NR989_03000 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NR989_04285 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D NR989_04290 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D NR989_10915 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR D NR989_05660 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NR989_06390 hsrA; homeostatic response regulator transcription factor HsrA K02483 K02483; two-component system, OmpR family, response regulator D NR989_06830 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NR989_06825 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NR989_01260 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D NR989_01255 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D NR989_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03855 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_08545 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03845 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03875 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_04895 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03895 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NR989_05980 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03565 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03725 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NR989_03730 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NR989_11395 HD domain-containing protein K13815 rpfG; two-component system, response regulator RpfG D NR989_09585 response regulator K15012 regA; two-component system, response regulator RegA D NR989_01125 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D NR989_04780 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D NR989_05285 ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor D NR989_05275 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D NR989_05280 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D NR989_10920 sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS C 02035 Bacterial motility proteins [BR:tlh02035] D NR989_03270 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03855 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NR989_03860 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_03880 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_04470 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NR989_03265 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D NR989_03890 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NR989_03895 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NR989_08545 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03845 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03875 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_04895 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NR989_03850 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D NR989_05980 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_03565 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NR989_05485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_06170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_06695 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_08435 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_08455 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_10690 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_00170 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_00395 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_02180 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_03900 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NR989_03750 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH D NR989_03755 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NR989_03760 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D NR989_03800 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NR989_03805 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NR989_03810 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NR989_03815 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NR989_03825 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NR989_03820 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D NR989_03745 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NR989_03790 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D NR989_03795 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NR989_03740 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NR989_03610 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NR989_03560 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D NR989_03605 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NR989_02950 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NR989_03785 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NR989_03735 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NR989_03575 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D NR989_03580 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NR989_03585 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D NR989_03595 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NR989_03600 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NR989_03590 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D NR989_03620 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D NR989_03625 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D NR989_03535 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D NR989_02940 flagellin K02406 fliC; flagellin D NR989_03685 flagellin K02406 fliC; flagellin D NR989_03690 flagellin K02406 fliC; flagellin D NR989_03705 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D NR989_11275 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D NR989_03710 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D NR989_03840 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D NR989_02165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_02240 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_03445 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NR989_03775 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NR989_02170 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02175 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_02245 OmpA family protein K02557 motB; chemotaxis protein MotB D NR989_03450 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_03780 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NR989_03725 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NR989_03730 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NR989_03555 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NR989_03700 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D NR989_03830 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D NR989_03835 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D NR989_02605 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D NR989_02600 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D NR989_08810 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D NR989_10855 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D NR989_06930 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NR989_11255 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA D NR989_11245 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D NR989_11240 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC D NR989_11235 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D NR989_11230 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tlh04812] D NR989_04350 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D NR989_03165 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NR989_08505 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NR989_08370 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D NR989_05390 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D NR989_11510 AAA family ATPase K03496 parA; chromosome partitioning protein D NR989_11505 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tlh04147] D NR989_03285 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NR989_05915 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NR989_01475 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NR989_01480 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NR989_01485 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NR989_08570 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D NR989_04485 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D NR989_02095 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NR989_04315 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NR989_02640 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NR989_03250 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NR989_01730 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NR989_01795 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D NR989_01040 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NR989_10820 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NR989_00665 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NR989_00680 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NR989_06800 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NR989_03470 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D NR989_02420 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NR989_02975 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NR989_00810 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NR989_08150 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NR989_09340 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NR989_08145 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D NR989_06545 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_03485 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NR989_11155 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NR989_07725 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NR989_07475 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:tlh02048] D NR989_04000 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D NR989_03985 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D NR989_03980 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D NR989_09240 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D NR989_07615 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_09210 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NR989_06535 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D NR989_08505 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NR989_03165 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NR989_02235 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NR989_02200 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NR989_05730 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:tlh01504] D NR989_00485 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_02015 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NR989_00480 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_02010 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NR989_02005 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D NR989_06150 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tlh03100] D NR989_05260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NR989_05715 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NR989_08850 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NR989_11565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NR989_10455 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NR989_02710 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NR989_07715 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NR989_09780 tRNA-Ile K14230 tRNA-Met; tRNA Met D NR989_02705 tRNA-Val K14237 tRNA-Val; tRNA Val D NR989_05465 tRNA-Val K14237 tRNA-Val; tRNA Val D NR989_05475 tRNA-Val K14237 tRNA-Val; tRNA Val # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NR989_06405 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D NR989_00310 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D NR989_04335 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NR989_00735 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NR989_02110 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D NR989_00165 c-type cytochrome K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D NR989_07025 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NR989_04215 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NR989_04770 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NR989_03110 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D NR989_06270 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D NR989_02670 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D NR989_05685 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NR989_00305 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D NR989_04345 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D NR989_05895 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D NR989_08065 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D NR989_07520 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NR989_01240 class I SAM-dependent methyltransferase K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D NR989_09545 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D NR989_10570 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D NR989_05060 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D NR989_11165 sugar phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D NR989_08780 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D NR989_08450 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NR989_09905 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D NR989_03500 PfkB family carbohydrate kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D NR989_02970 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D NR989_02225 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D NR989_07900 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NR989_08105 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NR989_10290 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NR989_05770 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D NR989_10200 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D NR989_06305 HD domain-containing protein K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D NR989_00435 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D NR989_01935 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NR989_04110 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NR989_01280 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NR989_04040 Maf family nucleotide pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D NR989_00390 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NR989_00565 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NR989_09840 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D NR989_07335 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D NR989_02570 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D NR989_04815 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D NR989_04820 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D NR989_04825 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D NR989_01105 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D NR989_04490 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D NR989_06335 ferredoxin family protein K05524 fdxA; ferredoxin D NR989_03020 2Fe-2S iron-sulfur cluster-binding protein K11107 yfaE; ferredoxin D NR989_04810 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D NR989_04805 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D NR989_04830 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D NR989_06570 flavodoxin K03839 fldA; flavodoxin I D NR989_09400 NapC/NirT family cytochrome c K02569 napC; cytochrome c-type protein NapC C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NR989_06065 VOC family protein K08234 yaeR; glyoxylase I family protein D NR989_02595 DUF2817 domain-containing protein K14054 mpaA; murein peptide amidase A D NR989_09950 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D NR989_05585 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A C 99987 Cofactor metabolism D NR989_00705 heme biosynthesis protein HemY K02498 hemY; HemY protein D NR989_02325 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D NR989_02330 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D NR989_01315 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism C 99999 Others D NR989_10025 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase D NR989_09700 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D NR989_06425 cold-shock protein K03704 cspA; cold shock protein D NR989_06815 cold-shock protein K03704 cspA; cold shock protein D NR989_03095 cold-shock protein K03704 cspA; cold shock protein D NR989_05210 cold shock domain-containing protein K03704 cspA; cold shock protein D NR989_06810 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D NR989_02960 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 C 99974 Translation D NR989_11610 rbbA; ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase D NR989_10790 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D NR989_05020 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D NR989_05440 tig; trigger factor K03545 tig; trigger factor D NR989_02105 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D NR989_04225 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D NR989_01320 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D NR989_01675 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D NR989_01695 OsmC family protein K07397 yhfA; putative redox protein D NR989_00145 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D NR989_10295 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D NR989_08790 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D NR989_08560 YraN family protein K07460 yraN; putative endonuclease D NR989_00855 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D NR989_01285 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D NR989_03935 replication-associated recombination protein A K07478 ycaJ; putative ATPase D NR989_11430 transposase K07491 rayT; REP-associated tyrosine transposase D NR989_11105 site-specific integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D NR989_06790 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D NR989_08980 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NR989_07125 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D NR989_03010 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D NR989_06095 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NR989_10240 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D NR989_03100 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family D NR989_04550 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D NR989_05775 septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D NR989_05960 universal stress protein K06149 uspA; universal stress protein A D NR989_01155 typA; translational GTPase TypA K06207 typA; GTP-binding protein D NR989_09560 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D NR989_07030 PhoH family protein K07175 phoH2; PhoH-like ATPase D NR989_05110 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein D NR989_02930 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein D NR989_10225 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D NR989_03930 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D NR989_00195 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D NR989_06010 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D NR989_05885 M23 family metallopeptidase K06194 nlpD; lipoprotein NlpD D NR989_05940 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D NR989_07115 AsmA family protein K07289 asmA; AsmA protein D NR989_11615 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein D NR989_04595 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D NR989_09375 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D NR989_09390 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D NR989_09395 tetratricopeptide repeat protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D NR989_02995 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D NR989_00495 copper resistance protein B K07233 pcoB; copper resistance protein B D NR989_04555 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D NR989_11040 glucosaminidase domain-containing protein K03796 bax; Bax protein D NR989_11085 group II truncated hemoglobin K06886 glbN; hemoglobin D NR989_10665 patatin-like phospholipase family protein K07001 K07001; NTE family protein D NR989_02120 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D NR989_08410 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D NR989_08400 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D NR989_09725 YihY family inner membrane protein K07058 K07058; membrane protein D NR989_09300 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D NR989_03205 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D NR989_04910 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D NR989_08645 LemA family protein K03744 lemA; LemA protein D NR989_05745 SlyX family protein K03745 slyX; SlyX protein D NR989_07765 SPOR domain-containing protein K03749 dedD; DedD protein D NR989_11260 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D NR989_05640 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein D NR989_01625 phosphate-starvation-inducible PsiE family protein K13256 psiE; protein PsiE D NR989_05010 PhnA domain-containing protein K06193 phnA; protein PhnA C 99997 Function unknown D NR989_01020 DUF255 domain-containing protein K06888 K06888; uncharacterized protein D NR989_06645 PP0621 family protein K06950 K06950; uncharacterized protein D NR989_07530 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D NR989_01015 zinc metallopeptidase K06973 K06973; uncharacterized protein D NR989_10990 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D NR989_04905 cupin domain-containing protein K06995 K06995; uncharacterized protein D NR989_05850 hypothetical protein K07000 K07000; uncharacterized protein D NR989_11065 MMPL family transporter K07003 K07003; uncharacterized protein D NR989_00065 MMPL family transporter K07003 K07003; uncharacterized protein D NR989_09275 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein D NR989_05835 AAA family ATPase K07028 K07028; uncharacterized protein D NR989_07420 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D NR989_10565 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D NR989_00295 permease K07089 K07089; uncharacterized protein D NR989_10210 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NR989_11715 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NR989_01200 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NR989_10300 DUF839 domain-containing protein K07093 K07093; uncharacterized protein D NR989_01160 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NR989_01165 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NR989_04560 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NR989_08555 penicillin-binding protein activator K07121 K07121; uncharacterized protein D NR989_06340 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D NR989_10165 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D NR989_06995 DsrE family protein K09004 K09004; uncharacterized protein D NR989_00335 DsrE family protein K09004 K09004; uncharacterized protein D NR989_00340 DsrE family protein K09004 K09004; uncharacterized protein D NR989_03035 DsrE family protein K09004 K09004; uncharacterized protein D NR989_09795 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D NR989_04355 amrA; AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein D NR989_03130 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D NR989_06245 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D NR989_07525 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D NR989_04405 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D NR989_08740 divergent PAP2 family protein K09775 K09775; uncharacterized protein D NR989_05780 YciI family protein K09780 K09780; uncharacterized protein D NR989_01170 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D NR989_01660 YbaN family protein K09790 K09790; uncharacterized protein D NR989_04695 Trm112 family protein K09791 K09791; uncharacterized protein D NR989_01325 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D NR989_04240 RnfH family protein K09801 K09801; uncharacterized protein D NR989_10375 S1-like domain-containing RNA-binding protein K00243 K00243; uncharacterized protein D NR989_10580 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein D NR989_03105 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D NR989_07060 UPF0149 family protein K09895 K09895; uncharacterized protein D NR989_01445 YcgL domain-containing protein K09902 K09902; uncharacterized protein D NR989_07175 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D NR989_06275 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D NR989_02355 DUF484 family protein K09921 K09921; uncharacterized protein D NR989_07135 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D NR989_04680 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D NR989_09730 putative DNA-binding domain-containing protein K09929 K09929; uncharacterized protein D NR989_09735 DUF692 domain-containing protein K09930 K09930; uncharacterized protein D NR989_04880 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D NR989_03330 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D NR989_06510 DUF3820 family protein K09954 K09954; uncharacterized protein D NR989_04175 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D NR989_04180 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D NR989_07110 YdbL family protein K09978 K09978; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024