+D GENES KO
#
KEGG Orthology (KO) - Thalassospira lucentensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tlu00010]
D R1T41_14330 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R1T41_19605 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R1T41_02155 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R1T41_16510 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D R1T41_18120 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D R1T41_18910 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R1T41_15610 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R1T41_10170 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D R1T41_10220 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D R1T41_18890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R1T41_16300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R1T41_02865 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D R1T41_05715 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R1T41_18880 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R1T41_18875 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R1T41_18870 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R1T41_20820 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R1T41_03980 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_21645 adh; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D R1T41_06400 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_08765 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_01205 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R1T41_20175 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R1T41_09145 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:tlu00020]
D R1T41_07075 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1]
D R1T41_16680 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D R1T41_18965 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D R1T41_04850 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D R1T41_12710 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D R1T41_09690 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D R1T41_09685 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_09695 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D R1T41_09700 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D R1T41_05965 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R1T41_05960 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R1T41_05975 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R1T41_05970 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R1T41_11830 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D R1T41_09705 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R1T41_05425 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D R1T41_09145 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D R1T41_05715 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R1T41_18880 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R1T41_18875 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R1T41_18870 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tlu00030]
D R1T41_19605 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R1T41_14315 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R1T41_14320 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D R1T41_06735 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D R1T41_15615 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D R1T41_04425 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D R1T41_09785 fsa; fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D R1T41_18560 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D R1T41_18290 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D R1T41_05230 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D R1T41_18285 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D R1T41_09460 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D R1T41_04040 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D R1T41_14325 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D R1T41_14335 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D R1T41_21375 glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D R1T41_13100 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D R1T41_12010 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D R1T41_19825 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D R1T41_15510 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D R1T41_18120 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D R1T41_16510 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D R1T41_02155 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tlu00040]
D R1T41_01810 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D R1T41_01820 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D R1T41_10815 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D R1T41_10820 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D R1T41_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_21000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_21005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R1T41_06735 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D R1T41_05225 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D R1T41_09575 D-lyxose/D-mannose family sugar isomerase K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D R1T41_20145 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D R1T41_01270 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D R1T41_01305 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D R1T41_06985 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D R1T41_01220 FGGY-family carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:tlu00051]
D R1T41_19610 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D R1T41_20995 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D R1T41_20035 HAD hydrolase family protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D R1T41_02155 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R1T41_16510 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D R1T41_18120 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D R1T41_18910 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D R1T41_18560 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D R1T41_08855 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:tlu00052]
D R1T41_01205 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R1T41_20175 aldose epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D R1T41_04335 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_04415 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_17175 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_21005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R1T41_14330 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R1T41_02155 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R1T41_03360 mandelate racemase/muconate lactonizing enzyme family protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D R1T41_21865 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D R1T41_21860 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
D R1T41_14305 alpha glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:tlu00053]
D R1T41_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_21000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_13100 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D R1T41_02810 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_21450 araD; L-arabinonate dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D R1T41_01305 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D R1T41_06985 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D R1T41_01185 kdgD; 5-dehydro-4-deoxyglucarate dehydratase K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
D R1T41_01165 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:tlu00500]
D R1T41_14305 alpha glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D R1T41_21005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R1T41_07975 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D R1T41_14330 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R1T41_19605 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R1T41_19610 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tlu00520]
D R1T41_17995 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D R1T41_04990 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D R1T41_18130 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D R1T41_18145 BadF/BadG/BcrA/BcrD ATPase family protein K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D R1T41_19610 PfkB family carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D R1T41_18135 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R1T41_21430 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R1T41_15745 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D R1T41_21435 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D R1T41_18150 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D R1T41_20785 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D R1T41_06565 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D R1T41_06560 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D R1T41_02780 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R1T41_03320 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R1T41_00940 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D R1T41_12920 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D R1T41_14330 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R1T41_21005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R1T41_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_21000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_04335 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_04415 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_17175 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_02810 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R1T41_08855 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D R1T41_19605 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R1T41_20995 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:tlu00620]
D R1T41_06400 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_08765 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_05715 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R1T41_18880 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R1T41_18875 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R1T41_18870 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_20820 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R1T41_03980 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R1T41_16300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R1T41_11265 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D R1T41_20920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D R1T41_20925 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D R1T41_07190 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D R1T41_14820 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_21645 adh; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D R1T41_16385 alpha-hydroxy acid oxidase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D R1T41_03070 FAD-linked oxidase C-terminal domain-containing protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D R1T41_18970 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D R1T41_04175 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D R1T41_07835 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D R1T41_07460 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D R1T41_11365 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D R1T41_05425 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D R1T41_09705 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R1T41_11830 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D R1T41_09145 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D R1T41_02865 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D R1T41_09525 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_12090 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D R1T41_14015 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tlu00630]
D R1T41_06400 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_08765 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_09525 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D R1T41_09705 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R1T41_07075 citryl-CoA lyase K01647 CS; citrate synthase [EC:2.3.3.1]
D R1T41_16680 citrate/2-methylcitrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D R1T41_18965 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D R1T41_04850 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_04220 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D R1T41_04550 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D R1T41_05150 ccrA; crotonyl-CoA carboxylase/reductase K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D R1T41_19085 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D R1T41_05145 protein meaA K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D R1T41_05155 acyl-CoA dehydrogenase family protein K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D R1T41_05980 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D R1T41_11295 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D R1T41_14805 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D R1T41_14800 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D R1T41_05645 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_05650 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_05420 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D R1T41_05415 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D R1T41_05410 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D R1T41_11395 D-glycerate dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D R1T41_07835 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D R1T41_14755 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D R1T41_18415 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D R1T41_21440 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D R1T41_09755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_15825 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_17580 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_19635 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_20535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_18555 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R1T41_05090 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D R1T41_05085 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D R1T41_05100 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_05095 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D R1T41_15505 hydroxypyruvate isomerase family protein K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D R1T41_15510 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D R1T41_14335 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D R1T41_01345 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D R1T41_01350 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D R1T41_01355 NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D R1T41_01360 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D R1T41_19785 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D R1T41_09245 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D R1T41_21910 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D R1T41_06305 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:tlu00640]
D R1T41_06400 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_08765 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_02135 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_06055 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D R1T41_02830 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_11265 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D R1T41_20920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D R1T41_20925 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D R1T41_07190 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D R1T41_15205 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D R1T41_19500 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D R1T41_01040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D R1T41_14805 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D R1T41_14800 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D R1T41_19085 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D R1T41_05645 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_05650 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_09700 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D R1T41_09695 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D R1T41_01475 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D R1T41_09670 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:tlu00650]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_05220 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D R1T41_01660 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R1T41_06875 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_06055 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D R1T41_04550 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D R1T41_04275 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D R1T41_16490 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D R1T41_14275 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D R1T41_04220 phbB; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D R1T41_19885 CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D R1T41_19880 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
D R1T41_11190 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D R1T41_05965 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R1T41_05960 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R1T41_05975 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R1T41_05970 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R1T41_15360 aspartate aminotransferase family protein K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D R1T41_00950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_10635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_14240 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_21110 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D R1T41_05735 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D R1T41_02660 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_07145 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_20085 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_02665 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R1T41_14125 SDR family NAD(P)-dependent oxidoreductase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:tlu00660]
D R1T41_02660 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_07145 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_20085 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_02665 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R1T41_09700 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D R1T41_09695 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D R1T41_11295 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D R1T41_05980 MaoC family dehydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D R1T41_10075 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D R1T41_10065 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D R1T41_01845 isocitrate/isopropylmalate family dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D R1T41_10060 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tlu00562]
D R1T41_13245 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R1T41_15590 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R1T41_01665 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D R1T41_01675 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D R1T41_01680 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D R1T41_01670 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D R1T41_01685 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D R1T41_01475 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D R1T41_18910 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tlu00190]
D R1T41_19170 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D R1T41_19165 NADH-quinone oxidoreductase subunit B family protein K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D R1T41_19160 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D R1T41_19155 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D R1T41_19150 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D R1T41_19145 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D R1T41_19140 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D R1T41_19135 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D R1T41_19130 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D R1T41_19125 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D R1T41_19120 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D R1T41_19115 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D R1T41_19110 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D R1T41_19105 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D R1T41_15490 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D R1T41_05965 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D R1T41_05960 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D R1T41_05975 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D R1T41_05970 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D R1T41_04150 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D R1T41_04160 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D R1T41_04155 cytochrome b N-terminal domain-containing protein K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D R1T41_05040 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D R1T41_13805 cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D R1T41_05025 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D R1T41_05045 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D R1T41_05050 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D R1T41_05030 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D R1T41_11935 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D R1T41_10155 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D R1T41_10150 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D R1T41_10140 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D R1T41_13800 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D R1T41_13795 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D R1T41_13790 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D R1T41_21670 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D R1T41_21675 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D R1T41_02930 c-type cytochrome K08738 CYC; cytochrome c
D R1T41_06105 cytochrome c family protein K08738 CYC; cytochrome c
D R1T41_15545 cache domain-containing protein K08738 CYC; cytochrome c
D R1T41_09815 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D R1T41_09825 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D R1T41_09820 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D R1T41_09810 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D R1T41_09830 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D R1T41_10385 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D R1T41_10395 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R1T41_10400 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R1T41_10390 ATP synthase subunit C family protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D R1T41_07420 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D R1T41_15125 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R1T41_21165 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:tlu00680]
D R1T41_21920 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R1T41_05750 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D R1T41_01350 fdhF; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D R1T41_01355 NADH-quinone oxidoreductase subunit NuoF K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D R1T41_01360 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D R1T41_01345 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D R1T41_18555 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R1T41_15510 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D R1T41_18890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R1T41_09705 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R1T41_11295 CoA ester lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D R1T41_18120 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D R1T41_16510 glpX; class II fructose-bisphosphatase K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D R1T41_02155 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D R1T41_06400 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_08765 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_10220 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D R1T41_20660 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_20945 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_17070 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D R1T41_02650 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:tlu00910]
D R1T41_21800 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D R1T41_05190 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D R1T41_05185 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D R1T41_05180 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D R1T41_04000 napA; periplasmic nitrate reductase subunit alpha K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D R1T41_04005 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D R1T41_21815 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D R1T41_21805 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D R1T41_21810 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D R1T41_02400 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D R1T41_06440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R1T41_09755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_15825 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_17580 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_19635 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_20535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_05495 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D R1T41_05500 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D R1T41_05175 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D R1T41_06060 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:tlu00920]
D R1T41_21735 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R1T41_21730 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R1T41_14865 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D R1T41_11945 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D R1T41_21140 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D R1T41_13670 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R1T41_16810 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R1T41_20775 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D R1T41_07940 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R1T41_16905 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R1T41_21385 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R1T41_05315 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D R1T41_16640 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D R1T41_09285 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D R1T41_06880 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D R1T41_21180 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tlu00061]
D R1T41_11265 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D R1T41_20920 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D R1T41_20925 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D R1T41_07190 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D R1T41_01505 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D R1T41_01510 acyl carrier protein K02078 acpP; acyl carrier protein
D R1T41_21240 acyl carrier protein K02078 acpP; acyl carrier protein
D R1T41_21250 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D R1T41_18495 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D R1T41_01560 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R1T41_01575 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R1T41_21235 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R1T41_01570 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_05135 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_07825 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21245 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_18990 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R1T41_06445 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_15275 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_02320 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D R1T41_02250 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_04840 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_06860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tlu00071]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06870 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_01660 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R1T41_06875 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R1T41_06055 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D R1T41_01630 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D R1T41_04645 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R1T41_02250 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_04840 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_06860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R1T41_20820 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R1T41_03980 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tlu00561]
D R1T41_15510 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_10710 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D R1T41_10715 dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D R1T41_00935 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D R1T41_18500 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D R1T41_17415 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D R1T41_05280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D R1T41_11720 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:tlu00564]
D R1T41_06680 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D R1T41_00955 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D R1T41_11800 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D R1T41_21625 glpD; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D R1T41_17415 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D R1T41_05280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D R1T41_20560 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D R1T41_09330 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D R1T41_12690 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D R1T41_13970 glycerophosphodiester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D R1T41_07805 SAM-dependent methyltransferase K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D R1T41_19025 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D R1T41_12805 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R1T41_12800 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D R1T41_18845 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D R1T41_05340 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:tlu00592]
D R1T41_06870 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:tlu01040]
D R1T41_06385 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D R1T41_16225 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tlu00230]
D R1T41_16910 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D R1T41_18285 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D R1T41_04040 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D R1T41_21305 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D R1T41_11660 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D R1T41_15060 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D R1T41_02605 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D R1T41_02595 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D R1T41_02600 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D R1T41_15065 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D R1T41_02175 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D R1T41_02170 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D R1T41_02590 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D R1T41_02555 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D R1T41_06715 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R1T41_16620 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D R1T41_17605 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D R1T41_18040 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R1T41_17640 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D R1T41_04050 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D R1T41_20010 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D R1T41_14090 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D R1T41_15025 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D R1T41_07355 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D R1T41_09210 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D R1T41_05915 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D R1T41_05910 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D R1T41_04020 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R1T41_14105 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R1T41_05900 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D R1T41_21215 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D R1T41_12780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_16110 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_21365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_12775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R1T41_21360 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R1T41_11430 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D R1T41_11955 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D R1T41_00110 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D R1T41_18775 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D R1T41_14070 Ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D R1T41_15120 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D R1T41_03890 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_07890 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_08460 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_08950 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_11625 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_16955 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_21595 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_02080 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_16950 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D R1T41_17080 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D R1T41_20575 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D R1T41_11575 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D R1T41_07895 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D R1T41_10830 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D R1T41_04610 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R1T41_15635 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D R1T41_14690 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R1T41_18395 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R1T41_16030 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D R1T41_02990 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D R1T41_21735 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R1T41_21730 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R1T41_05920 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D R1T41_06950 aspartate/glutamate racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D R1T41_05925 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D R1T41_05935 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D R1T41_05940 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D R1T41_05785 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D R1T41_05790 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D R1T41_05795 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D R1T41_20195 gamma-glutamyltransferase family protein K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:tlu00240]
D R1T41_03860 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D R1T41_03855 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D R1T41_17425 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D R1T41_17420 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D R1T41_20485 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D R1T41_15385 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D R1T41_08535 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D R1T41_19040 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D R1T41_15025 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D R1T41_18395 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R1T41_02745 nucleoside triphosphate pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D R1T41_07680 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D R1T41_18900 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D R1T41_08510 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D R1T41_17605 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D R1T41_18040 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R1T41_20270 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D R1T41_04610 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D R1T41_15635 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D R1T41_02675 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D R1T41_17635 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D R1T41_10320 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R1T41_10895 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R1T41_02785 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D R1T41_12780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_16110 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_21365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_12775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R1T41_21360 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R1T41_00110 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D R1T41_16295 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D R1T41_18345 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D R1T41_07930 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D R1T41_17645 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D R1T41_17495 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D R1T41_13855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D R1T41_01065 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D R1T41_01060 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D R1T41_01010 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D R1T41_01035 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D R1T41_01055 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D R1T41_07915 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tlu00250]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_10295 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D R1T41_02980 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R1T41_21630 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R1T41_15790 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D R1T41_08690 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D R1T41_05240 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D R1T41_17080 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D R1T41_02555 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D R1T41_17425 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D R1T41_15360 aspartate aminotransferase family protein K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D R1T41_00950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_10635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_14240 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_05495 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D R1T41_05500 NAD(P)-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D R1T41_06440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R1T41_21080 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D R1T41_09755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_15825 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_17580 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_19635 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_20535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_03860 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D R1T41_03855 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D R1T41_16215 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D R1T41_02600 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D R1T41_18135 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R1T41_21430 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R1T41_21305 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tlu00260]
D R1T41_02325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_18390 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_09235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_10035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_16505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R1T41_16770 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R1T41_05115 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D R1T41_05000 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D R1T41_11900 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D R1T41_11905 beta-eliminating lyase-related protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D R1T41_18555 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R1T41_07835 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D R1T41_15510 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D R1T41_10220 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D R1T41_20660 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_20945 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_17070 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D R1T41_02650 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D R1T41_05090 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D R1T41_05085 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D R1T41_05100 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_05095 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D R1T41_12805 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D R1T41_19670 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D R1T41_19675 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D R1T41_21880 aromatic ring-hydroxylating dioxygenase subunit alpha K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D R1T41_21885 hybrid-cluster NAD(P)-dependent oxidoreductase K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D R1T41_03590 sarcosine oxidase subunit beta family protein K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D R1T41_03605 sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D R1T41_03595 sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D R1T41_10225 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D R1T41_19665 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D R1T41_11185 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_16790 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_17050 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_18665 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_07185 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D R1T41_07180 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D R1T41_01900 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D R1T41_18380 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D R1T41_18375 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D R1T41_18385 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D R1T41_14055 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
D R1T41_11175 doeA; ectoine hydrolase DoeA K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D R1T41_11170 doeB; N(2)-acetyl-L-2,4-diaminobutanoate deacetylase DoeB K15784 doeB; N2-acetyl-L-2,4-diaminobutanoate deacetylase [EC:3.5.1.125]
D R1T41_11235 aspartate aminotransferase family protein K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D R1T41_21720 aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D R1T41_11240 NAD-dependent succinate-semialdehyde dehydrogenase K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:tlu00270]
D R1T41_20775 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D R1T41_07940 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R1T41_16905 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R1T41_21385 PLP-dependent cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D R1T41_16785 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D R1T41_03505 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R1T41_12765 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D R1T41_08065 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D R1T41_07150 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D R1T41_04050 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D R1T41_05725 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D R1T41_18220 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D R1T41_05165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R1T41_08870 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R1T41_11990 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D R1T41_02325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_18390 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_09235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_10035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_16505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R1T41_16770 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R1T41_05315 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D R1T41_16640 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D R1T41_18615 PLP-dependent transferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D R1T41_09285 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D R1T41_04130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_13220 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_11790 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D R1T41_07760 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_13670 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R1T41_16810 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R1T41_09705 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D R1T41_09430 Ldh family oxidoreductase K16844 comC; (2R)-3-sulfolactate dehydrogenase (NADP+) [EC:1.1.1.338]
D R1T41_10225 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D R1T41_19665 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D R1T41_20660 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_20945 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_17070 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tlu00280]
D R1T41_04130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_13220 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_21050 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_06055 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D R1T41_01630 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D R1T41_06070 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_06870 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D R1T41_14805 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D R1T41_14800 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D R1T41_19085 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D R1T41_05645 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_05650 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_04940 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D R1T41_18600 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D R1T41_21170 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D R1T41_01475 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_15200 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D R1T41_18650 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D R1T41_01040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D R1T41_21105 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D R1T41_21095 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D R1T41_21100 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D R1T41_21110 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tlu00290]
D R1T41_11185 eutB; hydroxyectoine utilization dehydratase EutB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_16790 threonine/serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_17050 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_18665 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D R1T41_10075 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D R1T41_10065 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D R1T41_01845 isocitrate/isopropylmalate family dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D R1T41_10060 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D R1T41_02660 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_07145 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_20085 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_02665 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R1T41_02670 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D R1T41_01265 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D R1T41_15780 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D R1T41_04130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_13220 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_21050 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D R1T41_12090 cimA; citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D R1T41_14015 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tlu00300]
D R1T41_16505 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R1T41_16770 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D R1T41_02325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_18390 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_09235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_10035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_01310 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R1T41_18820 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R1T41_20310 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R1T41_07210 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D R1T41_09070 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D R1T41_08735 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D R1T41_20525 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D R1T41_09065 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R1T41_10165 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D R1T41_05250 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D R1T41_03250 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R1T41_03255 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tlu00310]
D R1T41_06785 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D R1T41_06790 aspartate aminotransferase family protein K26062 K26062; 2-aminoadipate transaminase [EC:2.6.1.39]
D R1T41_09685 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_04645 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_00950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_10635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_14240 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_15940 FAD-binding and (Fe-S)-binding domain-containing protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D R1T41_04640 CaiB/BaiF CoA-transferase family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D R1T41_02960 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D R1T41_13515 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:tlu00220]
D R1T41_08740 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D R1T41_08690 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D R1T41_05240 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D R1T41_10785 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D R1T41_05785 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D R1T41_05790 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D R1T41_05795 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D R1T41_16215 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D R1T41_02600 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D R1T41_09755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_15825 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_17580 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_19635 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_20535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_03860 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D R1T41_03855 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D R1T41_06440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_05595 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D R1T41_11520 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D R1T41_16450 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D R1T41_08735 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D R1T41_08655 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D R1T41_13655 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D R1T41_19755 ArgE/DapE family deacylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:tlu00330]
D R1T41_10320 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R1T41_10895 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D R1T41_12100 agmatinase family protein K01480 speB; agmatinase [EC:3.5.3.11]
D R1T41_19620 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D R1T41_01120 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D R1T41_18655 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D R1T41_11055 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D R1T41_19640 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_19625 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D R1T41_21700 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D R1T41_21710 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D R1T41_21705 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D R1T41_19660 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D R1T41_04080 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D R1T41_18705 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D R1T41_13210 proline dehydrogenase family protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D R1T41_21080 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D R1T41_04305 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D R1T41_10255 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D R1T41_04685 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_13515 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D R1T41_00895 proline racemase family protein K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:tlu00340]
D R1T41_02775 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D R1T41_17075 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D R1T41_07855 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D R1T41_16750 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D R1T41_07865 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D R1T41_07875 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D R1T41_07860 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D R1T41_07885 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D R1T41_05305 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R1T41_06110 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D R1T41_02770 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D R1T41_01530 aromatic amino acid ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D R1T41_06310 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D R1T41_06330 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D R1T41_06300 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D R1T41_06335 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D R1T41_06340 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D R1T41_06305 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:tlu00350]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_05305 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R1T41_10985 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D R1T41_04665 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D R1T41_11020 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D R1T41_11030 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D R1T41_11025 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R1T41_20820 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R1T41_03980 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D R1T41_08875 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D R1T41_00950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_10635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_14240 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_11400 fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:tlu00360]
D R1T41_05635 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D R1T41_06890 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_05220 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_05305 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R1T41_10985 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D R1T41_19510 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D R1T41_13515 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D R1T41_09405 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D R1T41_01190 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:tlu00380]
D R1T41_01615 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D R1T41_19785 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D R1T41_01620 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D R1T41_09685 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_04645 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_09405 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tlu00400]
D R1T41_12030 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D R1T41_10490 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D R1T41_08990 type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D R1T41_20915 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D R1T41_08985 TIM barrel protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D R1T41_08975 shikimate dehydrogenase K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D R1T41_07675 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D R1T41_10485 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D R1T41_08505 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D R1T41_15270 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D R1T41_18920 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D R1T41_18930 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D R1T41_09170 anthranilate synthase component I K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D R1T41_18935 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D R1T41_09180 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D R1T41_18940 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D R1T41_07185 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D R1T41_07180 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D R1T41_05310 chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D R1T41_05300 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D R1T41_06095 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_05305 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R1T41_05635 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tlu00410]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_10105 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D R1T41_01065 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D R1T41_01060 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D R1T41_01010 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D R1T41_01035 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D R1T41_01055 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D R1T41_01040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_06055 acyl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D R1T41_15205 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D R1T41_19500 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9]
D R1T41_01475 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:tlu00430]
D R1T41_01965 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_06920 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_10865 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_11675 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_17360 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_20890 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_15790 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D R1T41_06440 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism [PATH:tlu00440]
D R1T41_09485 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D R1T41_09495 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D R1T41_09490 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D R1T41_09470 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D R1T41_09465 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D R1T41_09480 alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D R1T41_18365 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:tlu00450]
D R1T41_16640 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D R1T41_16785 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D R1T41_03505 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R1T41_12765 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D R1T41_05725 methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D R1T41_03880 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D R1T41_06575 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D R1T41_21735 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R1T41_21730 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R1T41_18355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tlu00460]
D R1T41_07975 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D R1T41_01965 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_06920 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_10865 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_11675 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_17360 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_20890 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_18555 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tlu00470]
D R1T41_21280 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R1T41_13515 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D R1T41_03325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R1T41_16215 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D R1T41_02600 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D R1T41_03265 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D R1T41_15830 dgcN; N-acetyltransferase DgcN K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D R1T41_15835 dgcA; N-acetyl-D-Glu racemase DgcA K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D R1T41_10165 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D R1T41_05250 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D R1T41_19750 FAD-binding oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D R1T41_00895 proline racemase family protein K01777 prdF; proline racemase [EC:5.1.1.4]
D R1T41_00905 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D R1T41_00915 dihydrodipicolinate synthase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D R1T41_01305 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D R1T41_06985 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D R1T41_19510 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:tlu00480]
D R1T41_01965 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_06920 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_10865 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_11675 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_17360 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_20890 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_05290 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D R1T41_03130 hydantoinase B/oxoprolinase family protein K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D R1T41_15525 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D R1T41_11790 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D R1T41_07760 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D R1T41_06185 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R1T41_14925 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R1T41_20320 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D R1T41_16930 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D R1T41_02425 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_06180 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_08370 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_09045 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_09050 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_09765 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_11230 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_20825 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_11970 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D R1T41_12710 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D R1T41_14315 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R1T41_18805 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D R1T41_05070 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D R1T41_01120 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D R1T41_18655 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D R1T41_15775 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:tlu00540]
D R1T41_18985 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D R1T41_03410 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D R1T41_18995 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D R1T41_18980 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D R1T41_18975 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D R1T41_11695 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D R1T41_07325 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D R1T41_18895 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D R1T41_06100 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D R1T41_11700 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D R1T41_11690 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D R1T41_03065 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D R1T41_04680 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D R1T41_04435 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D R1T41_08300 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D R1T41_08295 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D R1T41_04430 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D R1T41_15770 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D R1T41_04065 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D R1T41_01405 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tlu00541]
D R1T41_21005 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D R1T41_04335 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_04415 GDP-mannose 4,6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_17175 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D R1T41_04400 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_21000 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D R1T41_02810 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D R1T41_21415 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R1T41_16855 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_21425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_17190 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R1T41_21410 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R1T41_21420 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D R1T41_20995 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D R1T41_21435 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D R1T41_12920 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D R1T41_00940 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:tlu00550]
D R1T41_02780 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R1T41_03320 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R1T41_03315 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D R1T41_03265 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D R1T41_03250 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R1T41_03325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R1T41_03255 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D R1T41_19030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D R1T41_05505 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R1T41_03260 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R1T41_03310 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D R1T41_08645 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_08650 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_20870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_13990 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D R1T41_03245 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R1T41_18340 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:tlu00552]
D R1T41_05505 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R1T41_12965 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tlu00543]
D R1T41_20775 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tlu00730]
D R1T41_09855 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D R1T41_15750 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D R1T41_20760 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_20765 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_15175 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D R1T41_20910 thiS; sulfur carrier protein ThiS K03149 thiG; thiazole synthase [EC:2.8.1.10]
D R1T41_07515 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D R1T41_15600 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D R1T41_18520 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D R1T41_14690 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R1T41_19860 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D R1T41_20725 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:tlu00740]
D R1T41_07495 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D R1T41_18535 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D R1T41_18545 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D R1T41_17970 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D R1T41_18530 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D R1T41_18540 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D R1T41_04540 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D R1T41_05535 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D R1T41_16910 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D R1T41_02145 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tlu00750]
D R1T41_15315 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D R1T41_07215 aldo/keto reductase family oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D R1T41_17070 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D R1T41_21205 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D R1T41_18765 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D R1T41_05000 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tlu00760]
D R1T41_10295 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D R1T41_09735 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D R1T41_09730 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D R1T41_00600 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D R1T41_05490 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D R1T41_17640 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D R1T41_17605 bifunctional metallophosphatase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D R1T41_18040 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D R1T41_10250 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D R1T41_18395 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R1T41_09020 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D R1T41_12040 NAD+ synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D R1T41_18850 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D R1T41_07375 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D R1T41_13660 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D R1T41_02225 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D R1T41_02230 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D R1T41_02220 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D R1T41_11190 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D R1T41_00950 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_10635 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D R1T41_14240 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:tlu00770]
D R1T41_02660 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_07145 thiamine pyrophosphate-binding protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_20085 thiamine pyrophosphate-requiring protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D R1T41_02665 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D R1T41_02670 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D R1T41_01265 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D R1T41_15780 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D R1T41_10110 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D R1T41_04635 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D R1T41_10105 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D R1T41_19095 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D R1T41_07925 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D R1T41_18395 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D R1T41_20450 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D R1T41_07670 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D R1T41_18760 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D R1T41_01735 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D R1T41_10975 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D R1T41_04130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_13220 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_01065 NAD(P)-dependent oxidoreductase K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D R1T41_01060 preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D R1T41_01010 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D R1T41_01035 nitrilase-related carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6]
D R1T41_01055 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:tlu00780]
D R1T41_01560 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R1T41_01575 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R1T41_21235 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R1T41_01570 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_05135 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_07825 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21245 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_18990 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R1T41_06445 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_15275 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_08220 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D R1T41_19100 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tlu00785]
D R1T41_11355 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D R1T41_18860 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_05715 transketolase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D R1T41_18880 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D R1T41_18875 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D R1T41_18870 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D R1T41_09690 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D R1T41_09685 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D R1T41_05090 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D R1T41_05085 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D R1T41_05100 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R1T41_05095 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tlu00790]
D R1T41_09295 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D R1T41_20865 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D R1T41_12735 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D R1T41_05350 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D R1T41_18785 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D R1T41_15725 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D R1T41_13850 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D R1T41_07195 folylpolyglutamate synthase/dihydrofolate synthase family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D R1T41_07495 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D R1T41_18535 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D R1T41_17955 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D R1T41_17950 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D R1T41_17960 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D R1T41_12860 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D R1T41_06170 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D R1T41_05635 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D R1T41_12855 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D R1T41_12865 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D R1T41_03015 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D R1T41_12160 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D R1T41_18945 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D R1T41_05335 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D R1T41_17720 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D R1T41_17255 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D R1T41_10910 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D R1T41_01000 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tlu00670]
D R1T41_13850 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D R1T41_09990 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D R1T41_18555 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D R1T41_15060 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D R1T41_06715 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R1T41_08780 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D R1T41_05100 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D R1T41_03505 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D R1T41_13855 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D R1T41_09245 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D R1T41_21910 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D R1T41_03515 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D R1T41_14050 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tlu00860]
D R1T41_12045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_18960 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_02295 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D R1T41_18630 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D R1T41_06690 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D R1T41_06695 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D R1T41_07690 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D R1T41_04140 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D R1T41_15470 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D R1T41_07700 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D R1T41_07695 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D R1T41_21820 NAD(P)-dependent oxidoreductase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D R1T41_08415 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D R1T41_11940 NAD(P)-dependent oxidoreductase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D R1T41_05040 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D R1T41_11935 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D R1T41_08280 sirohydrochlorin chelatase K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D R1T41_08265 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D R1T41_08260 cobJ; precorrin-3B C(17)-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D R1T41_08255 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D R1T41_08405 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D R1T41_08410 cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D R1T41_08270 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D R1T41_08275 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D R1T41_08430 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D R1T41_08345 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D R1T41_10535 cobS; cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D R1T41_10540 cobT; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D R1T41_05205 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D R1T41_08360 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D R1T41_08365 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D R1T41_08285 cbiB; adenosylcobinamide-phosphate synthase CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D R1T41_13950 cobD; threonine-phosphate decarboxylase CobD K02225 cobC1; cobalamin biosynthesis protein CobC
D R1T41_08335 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D R1T41_08315 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D R1T41_08310 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D R1T41_08320 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D R1T41_08105 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D R1T41_09150 DUF2470 domain-containing protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D R1T41_19535 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D R1T41_19540 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tlu00130]
D R1T41_01585 thioesterase family protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D R1T41_11780 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D R1T41_11745 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D R1T41_02145 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D R1T41_02330 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D R1T41_06510 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D R1T41_16035 FAD-dependent oxidoreductase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D R1T41_09185 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D R1T41_11290 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D R1T41_15380 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D R1T41_12695 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D R1T41_16100 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D R1T41_15105 SDR family oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D R1T41_10985 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tlu00900]
D R1T41_15175 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D R1T41_19020 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D R1T41_18455 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D R1T41_04975 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D R1T41_02305 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D R1T41_05110 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_02145 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D R1T41_15165 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D R1T41_02895 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D R1T41_19030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:tlu00906]
D R1T41_10175 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D R1T41_18095 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:tlu00907]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_06895 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D R1T41_21110 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D R1T41_06870 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D R1T41_15615 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tlu00523]
D R1T41_21415 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R1T41_16855 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_21425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_17190 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R1T41_21410 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R1T41_21420 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D R1T41_11795 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D R1T41_16855 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_21425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tlu00946]
D R1T41_07975 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D R1T41_12505 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:tlu00332]
D R1T41_04305 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D R1T41_10255 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tlu00261]
D R1T41_21735 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D R1T41_21730 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D R1T41_02325 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_18390 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D R1T41_09235 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_10035 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D R1T41_01310 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R1T41_18820 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R1T41_20310 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D R1T41_07210 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tlu00521]
D R1T41_14330 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D R1T41_13245 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R1T41_15590 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D R1T41_01665 iolG; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D R1T41_21415 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R1T41_16855 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_21425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_17190 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R1T41_21410 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D R1T41_21420 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D R1T41_14330 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:tlu00525]
D R1T41_21415 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D R1T41_16855 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D R1T41_21425 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:tlu00401]
D R1T41_05300 prephenate/arogenate dehydrogenase family protein K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_05305 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D R1T41_18920 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D R1T41_18930 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D R1T41_21250 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D R1T41_01570 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_05135 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_07825 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21245 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_06445 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_15275 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D R1T41_01505 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D R1T41_01510 acyl carrier protein K02078 acpP; acyl carrier protein
D R1T41_21240 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tlu00999]
D R1T41_08065 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D R1T41_07675 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D R1T41_07975 GH1 family beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:tlu00997]
D R1T41_01910 IucA/IucC family protein K23374 sbnF; 2-[(L-alanin-3-ylcarbamoyl)methyl]-3-(2-aminoethylcarbamoyl)-2-hydroxypropanoate synthase [EC:6.3.2.55]
D R1T41_01920 IucA/IucC family protein K23375 sbnC; staphyloferrin B synthase [EC:6.3.2.56]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tlu00362]
D R1T41_19905 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D R1T41_06870 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D R1T41_19875 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D R1T41_01190 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D R1T41_20500 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D R1T41_19890 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D R1T41_19895 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D R1T41_19870 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D R1T41_12055 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D R1T41_19900 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D R1T41_20025 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D R1T41_01585 thioesterase family protein K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D R1T41_01660 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R1T41_06875 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D R1T41_04645 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D R1T41_05220 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:tlu00627]
D R1T41_14820 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D R1T41_02145 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D R1T41_01625 AMP-binding protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D R1T41_01650 bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:tlu00364]
D R1T41_01230 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_13565 yghX; YghX family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_14770 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:tlu00625]
D R1T41_20820 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R1T41_03980 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D R1T41_04760 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_04935 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_18660 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D R1T41_21920 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D R1T41_13575 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D R1T41_18830 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D R1T41_14765 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:tlu00361]
D R1T41_01230 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_13565 yghX; YghX family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_14770 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_18830 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D R1T41_14765 HAD family phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D R1T41_13575 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:tlu00623]
D R1T41_01230 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_13565 yghX; YghX family hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D R1T41_14770 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:tlu00622]
D R1T41_20500 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D R1T41_01190 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation [PATH:tlu00633]
D R1T41_03720 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D R1T41_16780 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D R1T41_06870 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:tlu00643]
D R1T41_04665 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D R1T41_11020 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D R1T41_11030 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D R1T41_11025 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D R1T41_19885 CoA-transferase K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12]
D R1T41_19880 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12]
C 00791 Atrazine degradation [PATH:tlu00791]
D R1T41_10785 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D R1T41_05785 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D R1T41_05790 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D R1T41_05795 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:tlu00930]
D R1T41_13100 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D R1T41_08555 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:tlu00621]
D R1T41_20500 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D R1T41_01190 fumarylacetoacetate hydrolase family protein K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:tlu00626]
D R1T41_20820 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D R1T41_03980 zinc-dependent alcohol dehydrogenase family protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D R1T41_05745 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:tlu00624]
D R1T41_00625 aldehyde dehydrogenase family protein K18275 phdK; 2-formylbenzoate dehydrogenase [EC:1.2.1.78]
D R1T41_00620 Rieske 2Fe-2S domain-containing protein K18068 pht3; phthalate 4,5-dioxygenase [EC:1.14.12.7]
D R1T41_00615 PDR/VanB family oxidoreductase K18069 pht2; phthalate 4,5-dioxygenase reductase component [EC:1.18.1.-]
D R1T41_00610 Gfo/Idh/MocA family oxidoreductase K18067 pht4; phthalate 4,5-cis-dihydrodiol dehydrogenase [EC:1.3.1.64]
D R1T41_00605 ABC transporter substrate-binding protein K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
D R1T41_19890 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D R1T41_19895 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tlu03020]
D R1T41_14555 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R1T41_14705 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R1T41_18780 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tlu03010]
D R1T41_08515 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D R1T41_19050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D R1T41_14615 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D R1T41_12125 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D R1T41_14670 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D R1T41_21255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D R1T41_14565 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D R1T41_14655 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D R1T41_16380 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D R1T41_14580 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D R1T41_14700 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D R1T41_14560 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D R1T41_14695 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D R1T41_14650 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D R1T41_08140 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D R1T41_10095 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D R1T41_14630 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D R1T41_21260 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D R1T41_14605 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D R1T41_08560 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D R1T41_02205 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D R1T41_14535 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D R1T41_14600 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D R1T41_14585 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D R1T41_14590 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D R1T41_14645 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D R1T41_14660 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D R1T41_14545 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D R1T41_21270 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D R1T41_14540 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D R1T41_14530 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D R1T41_16375 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D R1T41_14635 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D R1T41_14680 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D R1T41_14620 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D R1T41_14710 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D R1T41_14665 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D R1T41_10080 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D R1T41_06630 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D R1T41_04320 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D R1T41_14610 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D R1T41_14595 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D R1T41_14640 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D R1T41_04035 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D R1T41_04315 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D R1T41_10590 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D R1T41_14625 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D R1T41_14675 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D R1T41_02075 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D R1T41_16795 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D R1T41_17380 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R1T41_11495 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D R1T41_06635 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D R1T41_16945 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tlu00970]
D R1T41_16270 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D R1T41_14065 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R1T41_14060 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R1T41_06470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R1T41_07345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R1T41_11360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R1T41_03835 tRNA-Ile K14230 tRNA-Met; tRNA Met
D R1T41_02900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R1T41_14515 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D R1T41_12045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_18960 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_03905 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D R1T41_17450 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D R1T41_17455 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D R1T41_17445 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D R1T41_12610 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R1T41_15135 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R1T41_02875 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R1T41_02870 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R1T41_17775 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R1T41_18035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R1T41_12050 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R1T41_21035 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D R1T41_18355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R1T41_08780 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D R1T41_17945 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R1T41_12915 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R1T41_04535 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D R1T41_13205 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D R1T41_17985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R1T41_19070 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R1T41_02300 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D R1T41_06625 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R1T41_06620 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R1T41_20790 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R1T41_07485 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tlu03060]
D R1T41_14685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R1T41_14520 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R1T41_18905 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R1T41_18065 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D R1T41_18070 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D R1T41_17850 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D R1T41_18060 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R1T41_11510 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R1T41_05575 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R1T41_07705 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D R1T41_10100 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R1T41_11535 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R1T41_18020 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D R1T41_18025 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D R1T41_18755 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D R1T41_04530 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tlu04122]
D R1T41_20760 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_20765 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_13670 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R1T41_16810 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D R1T41_16990 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D R1T41_20720 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D R1T41_05335 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D R1T41_12160 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D R1T41_19705 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D R1T41_07945 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D R1T41_18945 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D R1T41_17720 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tlu03018]
D R1T41_10200 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D R1T41_20880 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D R1T41_18890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R1T41_08145 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D R1T41_06085 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D R1T41_13680 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D R1T41_17400 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R1T41_18800 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R1T41_07640 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D R1T41_19090 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D R1T41_07230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R1T41_21400 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R1T41_18410 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D R1T41_15125 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R1T41_21165 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D R1T41_10450 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tlu03030]
D R1T41_03555 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_07665 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_19055 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R1T41_09010 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R1T41_18350 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R1T41_07560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R1T41_14930 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R1T41_08570 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R1T41_21275 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D R1T41_03845 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D R1T41_18225 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_00105 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_05120 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D R1T41_04770 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D R1T41_07205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R1T41_03425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tlu03410]
D R1T41_07240 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D R1T41_10355 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D R1T41_08550 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D R1T41_20835 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R1T41_09265 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R1T41_09970 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R1T41_04925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D R1T41_18795 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D R1T41_11405 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R1T41_17975 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R1T41_07205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R1T41_16530 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R1T41_03425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tlu03420]
D R1T41_18275 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D R1T41_18115 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D R1T41_03945 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D R1T41_03485 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R1T41_07205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R1T41_03425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tlu03430]
D R1T41_07470 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D R1T41_04505 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D R1T41_03485 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R1T41_11665 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D R1T41_15160 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D R1T41_16530 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R1T41_18225 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_00105 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_19055 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R1T41_08570 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R1T41_09010 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R1T41_07560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R1T41_18350 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R1T41_03555 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_07665 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_14930 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R1T41_03425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R1T41_12880 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tlu03440]
D R1T41_16530 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R1T41_18225 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_00105 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_08575 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D R1T41_18730 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D R1T41_09000 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D R1T41_12585 recA; recombinase RecA K03553 recA; recombination protein RecA
D R1T41_07205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R1T41_15670 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D R1T41_15675 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D R1T41_15665 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D R1T41_18265 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R1T41_19055 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R1T41_08570 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R1T41_09010 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R1T41_07560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R1T41_18350 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R1T41_03555 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_07665 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_14930 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R1T41_09790 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D R1T41_15775 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tlu02010]
D R1T41_05190 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D R1T41_05185 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D R1T41_05180 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D R1T41_16660 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D R1T41_16665 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D R1T41_16670 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D R1T41_03565 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D R1T41_03570 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D R1T41_03575 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D R1T41_07070 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_13230 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_17240 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_17245 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_21520 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_13235 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R1T41_17250 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R1T41_21515 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R1T41_13240 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R1T41_18015 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R1T41_21510 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R1T41_18175 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D R1T41_19725 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D R1T41_19720 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D R1T41_18190 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D R1T41_19715 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D R1T41_19730 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D R1T41_15820 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D R1T41_15805 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D R1T41_18195 ABC transporter permease K11074 potI; putrescine transport system permease protein
D R1T41_15810 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D R1T41_15815 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D R1T41_03075 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_06325 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_17210 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_17230 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_19685 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_06320 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_17205 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_17215 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_19690 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_06315 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_17200 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_17220 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_19695 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_10010 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_14310 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_18170 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_03380 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_07995 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_19575 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_18155 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D R1T41_18160 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D R1T41_18165 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D R1T41_10025 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D R1T41_10020 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D R1T41_10015 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D R1T41_14290 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D R1T41_14295 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D R1T41_14300 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D R1T41_21465 chvE; multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D R1T41_21455 mmsB; multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D R1T41_21460 mmsA; multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_03530 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D R1T41_16120 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D R1T41_21285 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D R1T41_17690 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D R1T41_21290 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D R1T41_05880 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_10340 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_17610 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_17630 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_05890 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R1T41_10330 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R1T41_17620 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R1T41_05885 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D R1T41_10325 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D R1T41_17625 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D R1T41_05895 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R1T41_10335 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R1T41_17615 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R1T41_03395 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D R1T41_07980 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D R1T41_19560 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D R1T41_03390 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D R1T41_07985 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D R1T41_19565 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D R1T41_03385 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D R1T41_07990 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D R1T41_19570 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D R1T41_11090 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D R1T41_11085 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D R1T41_11080 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D R1T41_20170 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D R1T41_20155 yjfF; galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D R1T41_20160 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D R1T41_20165 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D R1T41_01275 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D R1T41_01280 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D R1T41_01285 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D R1T41_04185 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein
D R1T41_04190 ABC transporter permease K10553 frcC; fructose transport system permease protein
D R1T41_04195 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein
D R1T41_00985 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D R1T41_00970 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D R1T41_00975 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D R1T41_00960 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D R1T41_00965 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D R1T41_18200 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D R1T41_18205 ABC transporter permease subunit K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D R1T41_18210 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D R1T41_18215 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D R1T41_05395 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D R1T41_08380 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D R1T41_05390 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D R1T41_05385 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D R1T41_05380 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D R1T41_09440 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R1T41_11820 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R1T41_09445 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R1T41_11805 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R1T41_11810 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R1T41_09435 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R1T41_11815 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R1T41_02040 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D R1T41_04260 transporter substrate-binding domain-containing protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D R1T41_17710 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D R1T41_02045 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D R1T41_04250 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D R1T41_17705 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D R1T41_02050 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D R1T41_04255 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D R1T41_17700 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D R1T41_02055 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_04265 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_17695 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_18315 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_18305 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D R1T41_18300 ABC transporter permease subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D R1T41_01610 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_04825 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10665 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10670 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10880 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10950 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_17675 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_18570 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_21835 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_01605 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_03095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_04835 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10885 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_17660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_18595 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_01600 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_04830 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_10655 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_10890 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_17655 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_18590 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_01595 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_04845 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_10650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_10965 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_17670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_18585 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_01590 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_04820 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_10645 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_10970 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_17665 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_18580 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_14960 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R1T41_14955 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R1T41_14950 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R1T41_05825 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D R1T41_05820 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D R1T41_05815 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D R1T41_05810 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D R1T41_05805 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D R1T41_02480 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R1T41_02485 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D R1T41_02490 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D R1T41_02495 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R1T41_02500 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R1T41_11895 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D R1T41_11890 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D R1T41_11885 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D R1T41_11880 dppD; dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D R1T41_11875 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D R1T41_06220 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D R1T41_06215 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D R1T41_06210 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D R1T41_06205 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D R1T41_01145 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D R1T41_01150 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D R1T41_01155 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D R1T41_01140 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D R1T41_14385 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D R1T41_16765 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D R1T41_16760 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D R1T41_04455 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D R1T41_04465 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D R1T41_04470 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D R1T41_04460 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D R1T41_17840 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D R1T41_17830 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D R1T41_17825 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D R1T41_12575 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D R1T41_17845 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D R1T41_12570 hypothetical protein K16915 cbiL; nickel transport protein
D R1T41_17835 hypothetical protein K16915 cbiL; nickel transport protein
D R1T41_05765 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D R1T41_08225 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D R1T41_05755 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D R1T41_05760 ATP-binding cassette domain-containing protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D R1T41_19065 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D R1T41_19060 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D R1T41_04885 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D R1T41_04880 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D R1T41_04875 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D R1T41_04870 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D R1T41_21185 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D R1T41_21190 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D R1T41_07310 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D R1T41_05270 cell division protein K09811 ftsX; cell division transport system permease protein
D R1T41_05265 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R1T41_11710 ABC transporter transmembrane domain-containing protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D R1T41_10260 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D R1T41_11480 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D R1T41_11475 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D R1T41_05685 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_08095 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_17125 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_01250 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:tlu02060]
D R1T41_08865 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D R1T41_08860 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D R1T41_08855 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D R1T41_02315 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D R1T41_07295 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tlu03070]
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_18065 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D R1T41_17850 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D R1T41_18070 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D R1T41_14520 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R1T41_18905 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R1T41_14685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R1T41_18060 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R1T41_11510 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R1T41_05575 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R1T41_11535 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R1T41_07705 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D R1T41_10100 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R1T41_18020 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D R1T41_18025 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D R1T41_00030 DUF87 domain-containing protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D R1T41_00065 ATPase, T2SS/T4P/T4SS family K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D R1T41_19270 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D R1T41_02275 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tlu02020]
D R1T41_07910 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R1T41_05370 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D R1T41_10940 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D R1T41_20865 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D R1T41_12735 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D R1T41_05395 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D R1T41_08380 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D R1T41_04115 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D R1T41_04120 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D R1T41_02505 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_02645 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_09085 flagellin K02406 fliC; flagellin
D R1T41_12330 flagellin K02406 fliC; flagellin
D R1T41_12335 flagellin K02406 fliC; flagellin
D R1T41_04490 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_12280 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_16600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_18675 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D R1T41_03680 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D R1T41_03675 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D R1T41_03695 kdpA; potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D R1T41_03690 kdpB; potassium-transporting ATPase subunit KdpB K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D R1T41_03685 kdpC; potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit
D R1T41_00660 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D R1T41_07060 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D R1T41_01865 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D R1T41_01330 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_01855 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_06925 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_07100 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_07125 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_08660 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_07095 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D R1T41_07090 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_07115 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_01860 tricarboxylate transporter K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_06935 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_08670 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_11935 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D R1T41_08565 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R1T41_08840 stimulus-sensing domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D R1T41_08835 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D R1T41_08000 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R1T41_05985 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D R1T41_05435 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D R1T41_12470 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D R1T41_07475 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D R1T41_20530 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D R1T41_18440 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D R1T41_18435 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D R1T41_09755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_15825 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_17580 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_19635 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_20535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_18430 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D R1T41_18425 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_08830 cache domain-containing protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D R1T41_15440 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D R1T41_08825 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D R1T41_15435 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D R1T41_07305 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D R1T41_12200 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D R1T41_03160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_03165 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_05160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06540 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_08440 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_08700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_11765 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_13190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_13755 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_15540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_15905 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_16150 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_16605 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_17465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_18320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_20955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_00640 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_12185 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D R1T41_12180 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R1T41_12190 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12195 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R1T41_12510 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D R1T41_12175 histidine phosphotransferase family protein K13588 chpT; histidine phosphotransferase ChpT
D R1T41_12205 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D R1T41_14455 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; C4-dicarboxylate-binding protein DctP
D R1T41_15430 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D R1T41_15425 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D R1T41_14460 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D R1T41_11195 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_15420 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_20305 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_03135 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_03915 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_14465 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_15210 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_08955 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R1T41_17370 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R1T41_16215 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D R1T41_04150 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D R1T41_04160 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D R1T41_04155 cytochrome b N-terminal domain-containing protein K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit
D R1T41_02930 c-type cytochrome K08738 CYC; cytochrome c
D R1T41_06105 cytochrome c family protein K08738 CYC; cytochrome c
D R1T41_15545 cache domain-containing protein K08738 CYC; cytochrome c
D R1T41_10155 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D R1T41_10150 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D R1T41_10140 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D R1T41_21670 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D R1T41_21675 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_15890 response regulator K19622 phcR; two-component system, response regulator PhcR
D R1T41_01455 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D R1T41_09310 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D R1T41_02515 FecR domain-containing protein K07165 fecR; transmembrane sensor
D R1T41_08080 DUF4880 domain-containing protein K07165 fecR; transmembrane sensor
D R1T41_10730 FecR domain-containing protein K07165 fecR; transmembrane sensor
D R1T41_03005 FecR family protein K07165 fecR; transmembrane sensor
D R1T41_13550 FecR family protein K07165 fecR; transmembrane sensor
D R1T41_13940 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:tlu04148]
D R1T41_01120 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D R1T41_18655 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D R1T41_04150 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tlu02024]
D R1T41_18410 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D R1T41_18920 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D R1T41_18930 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D R1T41_12030 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D R1T41_03675 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D R1T41_19260 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D R1T41_19255 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D R1T41_19250 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D R1T41_19245 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D R1T41_19230 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D R1T41_19225 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D R1T41_19220 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D R1T41_19215 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D R1T41_06965 PotD/PotF family extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R1T41_10855 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R1T41_16010 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R1T41_06955 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_10845 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_16015 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_16020 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_06960 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R1T41_10850 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R1T41_06970 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_10840 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_16025 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_18185 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_01610 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_04825 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10665 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10670 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10880 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10950 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_17675 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_18570 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_21835 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_01605 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_03095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_04835 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10885 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_17660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_18595 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_01600 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_04830 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_10655 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_10890 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_17655 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_18590 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_01595 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_04845 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_10650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_10965 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_17670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_18585 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_01590 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_04820 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_10645 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_10970 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_17665 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_18580 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_02250 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_04840 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_06860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_08955 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R1T41_17370 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R1T41_16755 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D R1T41_07495 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D R1T41_02940 SUMF1/EgtB/PvdO family nonheme iron enzyme K20333 toxD; toxoflavin biosynthesis protein ToxD
D R1T41_18545 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D R1T41_02480 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R1T41_02485 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D R1T41_02490 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D R1T41_02495 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R1T41_02500 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R1T41_01990 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_05465 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_10765 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_13495 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_14410 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_16265 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_17310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_21770 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_01985 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_10770 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_13500 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_16260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_17315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_21765 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_14420 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_01980 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_10775 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_13505 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_14415 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_16255 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_17320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_21760 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_01975 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_10780 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_13510 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_16250 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_17305 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_21775 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_01970 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D R1T41_11510 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R1T41_17850 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D R1T41_14520 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R1T41_18905 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R1T41_14685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R1T41_18060 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R1T41_05575 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R1T41_11535 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R1T41_07705 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D R1T41_10100 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tlu02030]
D R1T41_03160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_03165 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_05160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06540 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_08440 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_08700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_11765 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_13190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_13755 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_15540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_15905 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_16150 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_16605 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_17465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_18320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_20955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_00640 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_11090 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D R1T41_11895 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D R1T41_12180 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R1T41_12185 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D R1T41_12190 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_04725 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D R1T41_12425 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D R1T41_12195 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R1T41_12200 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D R1T41_19180 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D R1T41_12405 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D R1T41_12285 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_21380 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_04490 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_12280 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_16600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_18675 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D R1T41_04495 OmpA family protein K02557 motB; chemotaxis protein MotB
D R1T41_12435 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_15575 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D R1T41_16595 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_18680 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tlu02040]
D R1T41_12485 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D R1T41_12295 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D R1T41_19180 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D R1T41_12290 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D R1T41_12210 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D R1T41_12215 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D R1T41_12400 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D R1T41_12405 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D R1T41_12285 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_21380 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_12455 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D R1T41_12450 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D R1T41_12490 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D R1T41_12495 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D R1T41_12270 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D R1T41_12500 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D R1T41_12385 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D R1T41_12475 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D R1T41_12480 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D R1T41_09115 FlgD immunoglobulin-like domain containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D R1T41_12305 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D R1T41_09120 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D R1T41_12300 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D R1T41_12395 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D R1T41_12390 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D R1T41_12380 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D R1T41_12365 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D R1T41_12360 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D R1T41_09130 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D R1T41_12350 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D R1T41_09135 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D R1T41_09085 flagellin K02406 fliC; flagellin
D R1T41_12330 flagellin K02406 fliC; flagellin
D R1T41_12335 flagellin K02406 fliC; flagellin
D R1T41_09090 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D R1T41_12320 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D R1T41_12315 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D R1T41_04490 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_12280 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_16600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_18675 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D R1T41_04495 OmpA family protein K02557 motB; chemotaxis protein MotB
D R1T41_12435 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_15575 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D R1T41_16595 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_18680 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_03840 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D R1T41_07305 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D R1T41_18890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:tlu04980]
D R1T41_05205 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D R1T41_05655 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D R1T41_05645 methylmalonyl-CoA mutase family protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_05650 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D R1T41_03505 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tlu01501]
D R1T41_07290 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D R1T41_17995 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D R1T41_02480 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R1T41_02485 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D R1T41_02490 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D R1T41_02495 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R1T41_02500 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R1T41_12505 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D R1T41_13630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R1T41_13635 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_08645 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_08650 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_20870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_13990 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D R1T41_03245 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R1T41_12560 blaOXA; class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:tlu01502]
D R1T41_08000 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R1T41_03325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R1T41_21280 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R1T41_03255 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D R1T41_03260 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R1T41_03310 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tlu01503]
D R1T41_20875 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R1T41_02505 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_02645 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_13630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R1T41_13635 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_18985 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tlu01000]
C 01001 Protein kinases [BR:tlu01001]
D R1T41_13460 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D R1T41_00510 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D R1T41_01430 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D R1T41_07910 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R1T41_04115 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D R1T41_03680 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D R1T41_07060 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D R1T41_08840 stimulus-sensing domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D R1T41_01235 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D R1T41_05430 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D R1T41_18440 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D R1T41_18430 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D R1T41_08830 cache domain-containing protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D R1T41_15440 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D R1T41_12180 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R1T41_12510 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tlu01009]
D R1T41_05165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R1T41_08870 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R1T41_11440 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D R1T41_02650 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:tlu01002]
D R1T41_04530 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D R1T41_04020 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R1T41_14105 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D R1T41_11610 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D R1T41_21305 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D R1T41_05495 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D R1T41_18135 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R1T41_21430 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D R1T41_02980 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R1T41_21630 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D R1T41_06280 type 1 glutamine amidotransferase domain-containing protein K05520 yhbO; deglycase [EC:3.5.1.124]
D R1T41_16320 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D R1T41_20320 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D R1T41_02245 M3 family oligoendopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D R1T41_08000 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R1T41_04515 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D R1T41_04520 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D R1T41_06185 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R1T41_14925 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D R1T41_16240 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D R1T41_21695 hydrolase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D R1T41_09065 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D R1T41_16930 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D R1T41_02445 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D R1T41_09520 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D R1T41_13965 Xaa-Pro peptidase family protein K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D R1T41_03455 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D R1T41_05010 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D R1T41_15720 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D R1T41_06420 htpX; zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D R1T41_19015 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D R1T41_03610 HlyD family efflux transporter periplasmic adaptor subunit K16922 yydH; putative peptide zinc metalloprotease protein
D R1T41_02505 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_02645 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_18340 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R1T41_19485 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D R1T41_19200 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D R1T41_18950 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D R1T41_18755 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D R1T41_04685 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D R1T41_10210 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D R1T41_17385 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D R1T41_21175 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D R1T41_08520 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D R1T41_03975 rhomboid family intramembrane serine protease K07059 K07059; rhomboid family protein
D R1T41_07900 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D R1T41_01965 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_06920 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_10865 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_11675 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_17360 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_20890 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D R1T41_20195 gamma-glutamyltransferase family protein K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D R1T41_01100 U32 family peptidase C-terminal domain-containing protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D R1T41_11735 TldD/PmbA family protein K03592 pmbA; PmbA protein
D R1T41_11910 tldD; metalloprotease TldD K03568 tldD; TldD protein
D R1T41_02635 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D R1T41_02630 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tlu01003]
D R1T41_15775 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D R1T41_11720 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D R1T41_08645 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_08650 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_20870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_12965 WecB/TagA/CpsF family glycosyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D R1T41_06905 mdoH; glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D R1T41_20040 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tlu01005]
D R1T41_18985 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D R1T41_18975 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D R1T41_03410 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D R1T41_18995 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D R1T41_18980 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D R1T41_11695 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D R1T41_11690 lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D R1T41_03065 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D R1T41_11700 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D R1T41_04680 acyloxyacyl hydrolase K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D R1T41_18895 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D R1T41_06100 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D R1T41_07325 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D R1T41_01405 glycosyltransferase family 9 protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D R1T41_04435 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D R1T41_08300 D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D R1T41_04430 HAD-IIIA family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D R1T41_15770 HAD family hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D R1T41_08295 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D R1T41_04065 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tlu01011]
D R1T41_02780 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D R1T41_03320 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D R1T41_03315 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D R1T41_03265 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D R1T41_03250 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D R1T41_03325 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D R1T41_21280 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D R1T41_03260 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D R1T41_03310 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D R1T41_05505 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D R1T41_07480 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D R1T41_08645 transglycosylase domain-containing protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_08650 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_20870 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D R1T41_13990 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D R1T41_03245 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R1T41_18340 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D R1T41_08000 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R1T41_18825 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D R1T41_07720 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D R1T41_18330 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D R1T41_21230 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D R1T41_18335 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D R1T41_20875 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tlu01004]
D R1T41_21250 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D R1T41_18495 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D R1T41_01560 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D R1T41_01575 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R1T41_21235 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D R1T41_01570 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_05135 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_07825 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21245 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_21850 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D R1T41_18990 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D R1T41_06445 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_15275 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D R1T41_02320 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D R1T41_06385 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D R1T41_16225 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D R1T41_06400 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_08765 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D R1T41_02135 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D R1T41_02250 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_04840 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_06860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_18500 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D R1T41_17415 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D R1T41_05280 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tlu01006]
D R1T41_15165 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D R1T41_02895 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D R1T41_19030 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D R1T41_10175 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D R1T41_18095 phytoene/squalene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D R1T41_02655 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D R1T41_11780 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D R1T41_05040 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:tlu01007]
D R1T41_13205 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D R1T41_12045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_18960 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_10545 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D R1T41_20790 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R1T41_07485 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D R1T41_12050 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R1T41_17985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R1T41_18355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R1T41_04535 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D R1T41_17945 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R1T41_12915 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R1T41_15135 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R1T41_02300 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D R1T41_02875 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R1T41_02870 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R1T41_18035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R1T41_19070 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R1T41_17775 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R1T41_12610 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R1T41_06625 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R1T41_06620 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R1T41_21035 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D R1T41_03950 aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D R1T41_16500 LL-diaminopimelate aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D R1T41_20525 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D R1T41_05305 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D R1T41_01040 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D R1T41_08735 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D R1T41_01900 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D R1T41_18380 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D R1T41_19640 aspartate aminotransferase family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D R1T41_15910 aspartate aminotransferase family protein K00596 E4.1.1.64; 2,2-dialkylglycine decarboxylase (pyruvate) [EC:4.1.1.64]
D R1T41_13515 D-amino-acid transaminase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D R1T41_04130 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_13220 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D R1T41_17070 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tlu00194]
D R1T41_09830 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D R1T41_09825 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D R1T41_09820 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D R1T41_09815 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D R1T41_09810 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D R1T41_10395 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R1T41_10400 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D R1T41_10390 ATP synthase subunit C family protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D R1T41_10385 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D R1T41_10380 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tlu03000]
D R1T41_19930 helix-turn-helix domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D R1T41_20650 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D R1T41_10605 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D R1T41_02530 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D R1T41_20835 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R1T41_14870 ftrA; transcriptional regulator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D R1T41_02560 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_06225 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_06805 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_07960 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_15500 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_21155 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_04650 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_07410 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D R1T41_19910 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D R1T41_03970 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D R1T41_17505 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D R1T41_03445 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D R1T41_02110 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D R1T41_17685 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D R1T41_21525 DeoR/GlpR family DNA-binding transcription regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D R1T41_03375 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R1T41_07970 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R1T41_10685 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R1T41_10860 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D R1T41_11075 LacI family DNA-binding transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D R1T41_01335 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D R1T41_12015 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D R1T41_09500 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D R1T41_06345 GntR family transcriptional regulator K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D R1T41_18140 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D R1T41_01200 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D R1T41_06945 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D R1T41_13690 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D R1T41_15515 FadR/GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D R1T41_02705 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D R1T41_19680 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D R1T41_01045 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D R1T41_03660 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D R1T41_03700 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D R1T41_06435 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D R1T41_06465 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D R1T41_09055 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D R1T41_13840 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D R1T41_01070 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_05630 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_06145 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_11045 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_11985 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_12625 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_21085 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_04230 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_16170 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_11165 Lrp/AsnC family transcriptional regulator K15782 doeX; Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
D R1T41_06005 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D R1T41_15290 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D R1T41_13150 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D R1T41_00590 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D R1T41_17120 MarR family transcriptional regulator K25883 expG; MarR family transcriptional regulator, exopolysaccharide II synthesis transcriptional activator
D R1T41_00185 helix-turn-helix domain-containing protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D R1T41_19525 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R1T41_11460 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D R1T41_08020 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D R1T41_16755 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D R1T41_08155 Fur family transcriptional regulator K09826 irr; Fur family transcriptional regulator, iron response regulator
D R1T41_17740 IclR family transcriptional regulator C-terminal domain-containing protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D R1T41_20090 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D R1T41_08955 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R1T41_17370 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D R1T41_10115 cyclic nucleotide-binding domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D R1T41_05440 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D R1T41_20770 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D R1T41_16180 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D R1T41_09885 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D R1T41_15150 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D R1T41_10945 short-chain fatty acyl-CoA regulator family protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D R1T41_04450 mntR; manganese-binding transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D R1T41_19100 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D R1T41_13465 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D R1T41_21640 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D R1T41_03580 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D R1T41_19470 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator
D R1T41_14130 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D R1T41_00700 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D R1T41_12580 nikR; nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D R1T41_21080 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D R1T41_10525 BolA family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D R1T41_07570 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R1T41_04705 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D R1T41_07365 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D R1T41_19860 TenA family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D R1T41_20725 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D R1T41_05730 sigma 54-interacting transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D R1T41_11310 hypothetical protein K03567 gcvR; glycine cleavage system transcriptional repressor
D R1T41_06045 pspF; phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D R1T41_05060 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D R1T41_05450 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D R1T41_12375 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D R1T41_18550 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D R1T41_03230 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tlu03021]
D R1T41_14705 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R1T41_14555 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R1T41_18780 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R1T41_03840 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D R1T41_09100 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R1T41_09605 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R1T41_10055 sigJ; RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R1T41_11565 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R1T41_14360 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R1T41_21060 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D R1T41_17095 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D R1T41_18245 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D R1T41_07305 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D R1T41_08115 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D R1T41_18525 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D R1T41_14525 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D R1T41_13935 SpoIIE family protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D R1T41_05450 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D R1T41_12375 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D R1T41_03865 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D R1T41_13000 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D R1T41_07640 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tlu03019]
D R1T41_20880 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D R1T41_02740 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D R1T41_18750 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R1T41_19090 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D R1T41_17400 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R1T41_06085 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D R1T41_13680 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D R1T41_18800 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R1T41_18890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R1T41_08145 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D R1T41_07640 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D R1T41_07230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R1T41_21400 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R1T41_18410 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D R1T41_15125 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D R1T41_21165 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D R1T41_10450 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D R1T41_10200 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D R1T41_12470 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D R1T41_08850 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D R1T41_12990 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tlu03011]
D R1T41_08515 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D R1T41_19050 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D R1T41_14615 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D R1T41_12125 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D R1T41_14670 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D R1T41_21255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D R1T41_14565 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D R1T41_14655 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D R1T41_16380 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D R1T41_14580 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D R1T41_14700 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D R1T41_14560 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D R1T41_14695 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D R1T41_14650 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D R1T41_08140 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D R1T41_10095 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D R1T41_14630 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D R1T41_21260 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D R1T41_14605 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D R1T41_08560 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D R1T41_02205 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D R1T41_14535 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D R1T41_14600 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D R1T41_14585 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D R1T41_14590 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D R1T41_14645 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D R1T41_14660 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D R1T41_21270 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D R1T41_14540 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D R1T41_14530 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D R1T41_14545 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D R1T41_16375 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D R1T41_14635 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D R1T41_14680 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D R1T41_14620 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D R1T41_14710 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D R1T41_14665 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D R1T41_10080 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D R1T41_06630 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D R1T41_04320 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D R1T41_14610 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D R1T41_14595 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D R1T41_14640 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D R1T41_04315 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D R1T41_10590 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D R1T41_14625 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D R1T41_14675 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D R1T41_02075 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D R1T41_16795 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D R1T41_17380 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D R1T41_11495 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D R1T41_06635 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D R1T41_16945 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D R1T41_04035 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:tlu03009]
D R1T41_18750 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R1T41_18745 era; GTPase Era K03595 era; GTPase
D R1T41_04310 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D R1T41_05450 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D R1T41_12375 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D R1T41_08115 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D R1T41_18525 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D R1T41_14525 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D R1T41_21210 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D R1T41_06730 transcription antitermination factor NusB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D R1T41_14095 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D R1T41_11600 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D R1T41_11785 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D R1T41_07580 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R1T41_03235 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D R1T41_07250 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D R1T41_15230 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D R1T41_14495 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D R1T41_14075 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D R1T41_10240 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D R1T41_09595 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D R1T41_10305 SAM-dependent methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D R1T41_07730 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D R1T41_11380 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D R1T41_09650 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D R1T41_11605 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D R1T41_14745 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D R1T41_17100 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D R1T41_09590 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D R1T41_08010 GNAT family N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D R1T41_15090 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D R1T41_10090 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D R1T41_03480 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D R1T41_20880 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D R1T41_02740 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D R1T41_17440 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D R1T41_21330 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D R1T41_18405 hflX; GTPase HflX K03665 hflX; GTPase
D R1T41_14855 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D R1T41_18775 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D R1T41_08130 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D R1T41_08110 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D R1T41_10245 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D R1T41_08045 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D R1T41_07300 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D R1T41_04025 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:tlu03016]
D R1T41_12045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_18960 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_19070 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D R1T41_04535 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D R1T41_12915 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R1T41_18355 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D R1T41_17985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R1T41_15135 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R1T41_12610 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D R1T41_17775 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D R1T41_18035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D R1T41_12050 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D R1T41_17945 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D R1T41_02300 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D R1T41_06625 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D R1T41_06620 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D R1T41_20790 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R1T41_07485 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D R1T41_16815 alanyl-tRNA editing protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D R1T41_07850 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D R1T41_08070 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D R1T41_08695 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D R1T41_08135 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D R1T41_20760 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_20765 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_14855 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D R1T41_02655 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D R1T41_07590 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D R1T41_07585 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R1T41_14865 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D R1T41_11500 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D R1T41_07360 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D R1T41_07330 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D R1T41_15100 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D R1T41_06360 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D R1T41_13205 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D R1T41_02875 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D R1T41_02870 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D R1T41_21035 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D R1T41_10545 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D R1T41_06480 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D R1T41_11615 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D R1T41_17345 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D R1T41_18445 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D R1T41_05670 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D R1T41_08035 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D R1T41_11530 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D R1T41_19445 class I SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D R1T41_12120 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D R1T41_18105 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D R1T41_10085 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D R1T41_04145 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D R1T41_09650 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D R1T41_20720 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D R1T41_16990 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D R1T41_20750 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D R1T41_02860 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D R1T41_17340 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D R1T41_03025 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D R1T41_12865 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D R1T41_12860 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D R1T41_12855 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D R1T41_03015 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D R1T41_02995 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D R1T41_03020 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D R1T41_15715 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D R1T41_08005 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D R1T41_06685 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D R1T41_06570 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D R1T41_17400 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D R1T41_08145 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tlu03012]
D R1T41_08125 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D R1T41_06645 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D R1T41_15020 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D R1T41_19045 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D R1T41_14510 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R1T41_14575 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R1T41_03895 elongation factor G K02355 fusA; elongation factor G
D R1T41_14570 fusA; elongation factor G K02355 fusA; elongation factor G
D R1T41_02290 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D R1T41_19035 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D R1T41_02285 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D R1T41_04030 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D R1T41_02750 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D R1T41_15595 efp; elongation factor P K02356 efp; elongation factor P
D R1T41_20860 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D R1T41_09900 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D R1T41_04745 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:tlu03110]
D R1T41_20970 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D R1T41_02265 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D R1T41_19205 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D R1T41_07905 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D R1T41_11440 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D R1T41_07230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R1T41_20740 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D R1T41_16515 Hsp70 family protein K04046 yegD; hypothetical chaperone protein
D R1T41_21400 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R1T41_07225 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D R1T41_03170 TerB family tellurite resistance protein K05801 djlA; DnaJ like chaperone protein
D R1T41_20745 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D R1T41_08745 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D R1T41_07370 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D R1T41_16915 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D R1T41_21390 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D R1T41_11470 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D R1T41_21405 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D R1T41_02505 trypsin-like peptidase domain-containing protein K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_02645 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D R1T41_15720 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D R1T41_10385 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D R1T41_07705 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D R1T41_11845 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D R1T41_00220 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D R1T41_18915 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D R1T41_05590 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D R1T41_17805 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D R1T41_21200 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D R1T41_06545 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D R1T41_06485 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D R1T41_02410 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D R1T41_12135 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D R1T41_04900 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D R1T41_00245 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:tlu04131]
D R1T41_15025 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D R1T41_15610 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R1T41_16300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R1T41_11440 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:tlu03051]
D R1T41_11440 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tlu03032]
D R1T41_05120 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D R1T41_19195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R1T41_18490 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D R1T41_08525 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D R1T41_08565 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R1T41_21275 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D R1T41_03845 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D R1T41_18225 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_00105 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_19055 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R1T41_08570 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R1T41_14930 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R1T41_07560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R1T41_18350 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R1T41_03555 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_07665 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_09010 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R1T41_04770 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D R1T41_07205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R1T41_03425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R1T41_12880 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R1T41_20455 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D R1T41_08580 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D R1T41_18725 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R1T41_16220 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R1T41_17405 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D R1T41_00360 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tlu03036]
D R1T41_15775 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D R1T41_18750 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D R1T41_01470 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D R1T41_19195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R1T41_18490 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D R1T41_08525 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D R1T41_08565 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D R1T41_03900 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D R1T41_11545 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D R1T41_18410 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D R1T41_17505 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D R1T41_01070 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_05630 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_06145 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_11045 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_11985 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_12625 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_21085 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_04230 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_16170 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D R1T41_10370 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D R1T41_18005 ScpA family protein K05896 scpA; segregation and condensation protein A
D R1T41_18010 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D R1T41_03400 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R1T41_05265 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R1T41_03245 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D R1T41_06535 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D R1T41_03240 hypothetical protein K03586 ftsL; cell division protein FtsL
D R1T41_03330 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D R1T41_03270 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D R1T41_05270 cell division protein K09811 ftsX; cell division transport system permease protein
D R1T41_03405 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R1T41_15625 cell division protein ZapA K09888 zapA; cell division protein ZapA
D R1T41_09710 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D R1T41_20875 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R1T41_13630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R1T41_14005 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R1T41_14000 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D R1T41_13995 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D R1T41_13985 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D R1T41_07575 ParA family protein K03496 parA; chromosome partitioning protein
D R1T41_19355 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein
D R1T41_21020 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D R1T41_00405 AAA family ATPase K03496 parA; chromosome partitioning protein
D R1T41_07570 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D R1T41_18725 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R1T41_16220 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R1T41_07585 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D R1T41_07580 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D R1T41_18105 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D R1T41_09775 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D R1T41_10470 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D R1T41_02625 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D R1T41_11515 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tlu03400]
D R1T41_07610 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D R1T41_20830 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D R1T41_02710 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D R1T41_10355 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D R1T41_07240 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D R1T41_04440 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D R1T41_05555 mutT; 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D R1T41_09725 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D R1T41_18235 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D R1T41_07930 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D R1T41_02530 ada; bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D R1T41_19545 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D R1T41_04925 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D R1T41_18795 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D R1T41_20835 Ada metal-binding domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D R1T41_09265 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R1T41_09970 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D R1T41_08550 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D R1T41_11405 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R1T41_17975 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D R1T41_16530 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D R1T41_03425 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D R1T41_07205 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D R1T41_18115 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D R1T41_03945 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D R1T41_03485 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D R1T41_14555 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D R1T41_14705 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D R1T41_18780 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D R1T41_18275 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D R1T41_07470 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D R1T41_04505 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D R1T41_11665 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D R1T41_15160 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D R1T41_19055 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D R1T41_08570 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D R1T41_14930 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D R1T41_07560 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D R1T41_18350 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D R1T41_03555 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_07665 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D R1T41_09010 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D R1T41_18225 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_00105 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_12880 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R1T41_12585 recA; recombinase RecA K03553 recA; recombination protein RecA
D R1T41_15670 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D R1T41_15675 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D R1T41_15665 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D R1T41_09790 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D R1T41_21295 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D R1T41_08575 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D R1T41_18265 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D R1T41_18730 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D R1T41_09000 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D R1T41_03420 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D R1T41_06550 addA; double-strand break repair helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D R1T41_06555 addB; double-strand break repair protein AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D R1T41_20455 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D R1T41_08580 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D R1T41_17405 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D R1T41_19195 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D R1T41_18490 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D R1T41_08525 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D R1T41_18800 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D R1T41_01470 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D R1T41_16570 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D R1T41_00320 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D R1T41_18950 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D R1T41_21740 protein ImuA K14160 imuA; protein ImuA
D R1T41_21745 DNA polymerase Y family protein K14161 imuB; protein ImuB
D R1T41_21750 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D R1T41_08725 RecX family transcriptional regulator K03565 recX; regulatory protein
D R1T41_13110 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D R1T41_12780 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_16110 vitamin B12-dependent ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_21365 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D R1T41_12775 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D R1T41_21360 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tlu03029]
D R1T41_08125 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D R1T41_06645 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D R1T41_19045 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D R1T41_14510 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R1T41_14575 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R1T41_03895 elongation factor G K02355 fusA; elongation factor G
D R1T41_14570 fusA; elongation factor G K02355 fusA; elongation factor G
D R1T41_18510 ubiquinol-cytochrome C chaperone family protein K17662 CBP3; cytochrome b pre-mRNA-processing protein 3
D R1T41_11465 helicase-related protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D R1T41_18745 era; GTPase Era K03595 era; GTPase
D R1T41_20790 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D R1T41_12915 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D R1T41_15135 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D R1T41_17985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D R1T41_03905 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D R1T41_17450 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D R1T41_17455 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D R1T41_17445 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D R1T41_00150 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D R1T41_18225 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_00105 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D R1T41_19010 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D R1T41_07230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R1T41_07370 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D R1T41_21400 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R1T41_21405 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D R1T41_07225 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D R1T41_20760 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_20765 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_20745 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D R1T41_12135 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D R1T41_04055 class I SAM-dependent methyltransferase K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D R1T41_02625 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D R1T41_05040 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D R1T41_05030 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D R1T41_11935 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D R1T41_11510 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R1T41_05015 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D R1T41_13810 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D R1T41_08425 SCO family protein K07152 SCO1; protein SCO1
D R1T41_00225 SCO family protein K07152 SCO1; protein SCO1
D R1T41_11440 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tlu02000]
D R1T41_11710 ABC transporter transmembrane domain-containing protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D R1T41_10260 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D R1T41_02065 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D R1T41_10755 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D R1T41_11480 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D R1T41_11475 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D R1T41_05685 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_08095 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_17125 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_01250 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D R1T41_03175 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D R1T41_11250 ABC transporter transmembrane domain-containing protein K02021 ABC.MR; putative ABC transport system ATP-binding protein
D R1T41_03565 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D R1T41_03570 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D R1T41_03575 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D R1T41_05190 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D R1T41_05185 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D R1T41_05180 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D R1T41_07070 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_13230 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_17240 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_17245 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_21520 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D R1T41_13235 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R1T41_17250 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R1T41_21515 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D R1T41_13240 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R1T41_18015 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R1T41_21510 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D R1T41_18175 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D R1T41_19725 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D R1T41_19720 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D R1T41_18190 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D R1T41_19715 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D R1T41_19730 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D R1T41_15820 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D R1T41_15805 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D R1T41_18195 ABC transporter permease K11074 potI; putrescine transport system permease protein
D R1T41_15810 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D R1T41_15815 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D R1T41_06965 PotD/PotF family extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R1T41_10855 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R1T41_16010 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D R1T41_06955 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_10845 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_16015 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_16020 ABC transporter permease subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D R1T41_06960 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R1T41_10850 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D R1T41_06970 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_10840 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_16025 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_18185 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D R1T41_03075 choX; choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_06325 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_17210 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_17230 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_19685 choline ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D R1T41_06320 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_17205 proline/glycine betaine ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_17215 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_19690 choW; choline ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein
D R1T41_06315 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_17200 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_17220 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_19695 choV; choline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D R1T41_16660 ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D R1T41_16665 ABC transporter permease K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D R1T41_16670 ABC transporter ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D R1T41_12230 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D R1T41_12235 ABC transporter permease subunit K05778 ynjC; putative thiamine transport system permease protein
D R1T41_12240 ATP-binding cassette domain-containing protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D R1T41_01015 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D R1T41_12115 putative urea ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D R1T41_14785 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D R1T41_19950 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D R1T41_01020 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D R1T41_01025 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D R1T41_12110 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D R1T41_14775 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D R1T41_19940 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D R1T41_01030 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D R1T41_12105 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D R1T41_14780 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D R1T41_19945 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D R1T41_10010 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_14310 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_18170 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_03380 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_07995 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_19575 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_18155 extracellular solute-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D R1T41_18160 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D R1T41_18165 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D R1T41_03395 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D R1T41_07980 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D R1T41_19560 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D R1T41_03390 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D R1T41_07985 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D R1T41_19565 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein
D R1T41_03385 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D R1T41_07990 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D R1T41_19570 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein
D R1T41_14290 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D R1T41_14295 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D R1T41_14300 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D R1T41_01275 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D R1T41_01280 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein
D R1T41_01285 ATP-binding cassette domain-containing protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D R1T41_21465 chvE; multiple monosaccharide ABC transporter substrate-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D R1T41_21455 mmsB; multiple monosaccharide ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D R1T41_21460 mmsA; multiple monosaccharide ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_04185 sugar ABC transporter substrate-binding protein K10552 frcB; fructose transport system substrate-binding protein
D R1T41_04190 ABC transporter permease K10553 frcC; fructose transport system permease protein
D R1T41_04195 ATP-binding cassette domain-containing protein K10554 frcA; fructose transport system ATP-binding protein
D R1T41_11090 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D R1T41_11085 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D R1T41_11080 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D R1T41_20170 ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein
D R1T41_20155 yjfF; galactofuranose ABC transporter, permease protein YjfF K23509 ytfT; galactofuranose transport system permease protein
D R1T41_20160 ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein
D R1T41_20165 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D R1T41_00985 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D R1T41_00970 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein
D R1T41_00975 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein
D R1T41_00960 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D R1T41_00965 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D R1T41_18200 extracellular solute-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D R1T41_18205 ABC transporter permease subunit K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D R1T41_18210 ugpE; sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D R1T41_18215 sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D R1T41_10025 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D R1T41_10020 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein
D R1T41_10015 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein
D R1T41_05880 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_10340 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_17610 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_17630 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D R1T41_05890 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R1T41_10330 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R1T41_17620 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D R1T41_05885 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D R1T41_10325 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D R1T41_17625 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D R1T41_05895 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R1T41_10335 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R1T41_17615 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D R1T41_16120 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D R1T41_21285 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D R1T41_17690 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D R1T41_21290 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D R1T41_03530 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D R1T41_01700 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D R1T41_10695 substrate-binding domain-containing protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D R1T41_01695 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D R1T41_10690 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D R1T41_10705 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein
D R1T41_01690 ATP-binding cassette domain-containing protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_10700 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D R1T41_05395 PstS family phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D R1T41_08380 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein
D R1T41_05390 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D R1T41_05385 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D R1T41_05380 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D R1T41_09440 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R1T41_11820 phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D R1T41_09445 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R1T41_11805 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R1T41_11810 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D R1T41_09435 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R1T41_11815 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D R1T41_02040 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D R1T41_04260 transporter substrate-binding domain-containing protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D R1T41_17710 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D R1T41_02045 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D R1T41_04250 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D R1T41_17705 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D R1T41_02050 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D R1T41_04255 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D R1T41_17700 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D R1T41_02055 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_04265 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_17695 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_18315 ATP-binding cassette domain-containing protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_01610 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_04825 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10665 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10670 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10880 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_10950 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_17675 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_18570 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_21835 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D R1T41_01605 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_03095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_04835 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10885 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_10955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_17660 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_18595 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D R1T41_01600 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_04830 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_10655 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_10890 ATP-binding cassette domain-containing protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_17655 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_18590 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D R1T41_01595 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_04845 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_10650 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_10965 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_17670 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_18585 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D R1T41_01590 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_04820 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_10645 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_10970 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_17665 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_18580 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D R1T41_14960 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D R1T41_14955 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D R1T41_14950 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D R1T41_05825 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D R1T41_05820 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D R1T41_05815 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D R1T41_05810 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D R1T41_05805 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D R1T41_13600 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D R1T41_13590 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D R1T41_13595 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D R1T41_18305 ABC transporter permease K23056 K23056; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D R1T41_18300 ABC transporter permease subunit K23057 K23057; putative lysine/arginine/ornithine/histidine/octopine transport system permease protein
D R1T41_01050 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_02620 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_03195 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_03790 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_04165 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_06080 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_07660 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_09140 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_09795 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_12705 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_12820 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_13525 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_13695 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_14180 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_14395 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_16200 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_16465 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_16535 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_16545 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_18310 lysine/arginine/ornithine ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_20030 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D R1T41_13700 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D R1T41_13705 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D R1T41_14185 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D R1T41_14190 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D R1T41_14390 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D R1T41_13710 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_14195 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D R1T41_02480 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D R1T41_02485 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D R1T41_02490 ABC transporter permease subunit K15582 oppC; oligopeptide transport system permease protein
D R1T41_02495 ATP-binding cassette domain-containing protein K15583 oppD; oligopeptide transport system ATP-binding protein
D R1T41_02500 dipeptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D R1T41_11895 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D R1T41_11890 ABC transporter permease subunit K12369 dppB; dipeptide transport system permease protein
D R1T41_11885 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D R1T41_11880 dppD; dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D R1T41_11875 peptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D R1T41_01990 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_05465 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_10765 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_13495 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_14410 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_16265 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_17310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_21770 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D R1T41_01985 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_10770 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_13500 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_16260 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_17315 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_21765 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_14420 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D R1T41_01980 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_10775 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_13505 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_14415 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_16255 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_17320 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_21760 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D R1T41_01975 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_10780 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_13510 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_16250 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_17305 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_21775 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D R1T41_01970 ATP-binding cassette domain-containing protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D R1T41_06220 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D R1T41_06215 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D R1T41_06210 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D R1T41_06205 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D R1T41_01145 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D R1T41_01150 iron-siderophore ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D R1T41_01155 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D R1T41_01140 ABC transporter ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D R1T41_01925 iron-siderophore ABC transporter substrate-binding protein K25109 sirA; iron-siderophore transport system substrate-binding protein
D R1T41_01930 iron ABC transporter permease K25110 sirB; iron-siderophore transport system permease protein
D R1T41_01935 iron ABC transporter permease K25111 sirC; iron-siderophore transport system permease protein
D R1T41_01940 ABC transporter ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D R1T41_08180 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D R1T41_10740 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D R1T41_11645 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D R1T41_11930 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D R1T41_20405 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D R1T41_08175 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D R1T41_10745 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D R1T41_11650 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D R1T41_08170 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D R1T41_10750 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D R1T41_11655 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D R1T41_14385 znuA; zinc ABC transporter substrate-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D R1T41_16765 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D R1T41_16760 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D R1T41_04455 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D R1T41_04465 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D R1T41_04470 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein
D R1T41_04460 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D R1T41_17830 cbiQ; cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D R1T41_17840 cbiM; cobalt transporter CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D R1T41_17825 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D R1T41_12575 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D R1T41_17845 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D R1T41_12570 hypothetical protein K16915 cbiL; nickel transport protein
D R1T41_17835 hypothetical protein K16915 cbiL; nickel transport protein
D R1T41_05765 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D R1T41_08225 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D R1T41_05755 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D R1T41_05760 ATP-binding cassette domain-containing protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D R1T41_21185 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D R1T41_21190 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D R1T41_07310 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D R1T41_19065 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D R1T41_19060 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D R1T41_04885 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D R1T41_04880 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D R1T41_04875 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D R1T41_04870 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D R1T41_05270 cell division protein K09811 ftsX; cell division transport system permease protein
D R1T41_05265 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D R1T41_08730 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D R1T41_15870 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D R1T41_07170 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D R1T41_06395 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D R1T41_15960 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D R1T41_06390 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R1T41_15955 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D R1T41_09325 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D R1T41_16160 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R1T41_21125 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D R1T41_13715 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D R1T41_03730 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D R1T41_06815 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D R1T41_17335 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D R1T41_09865 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D R1T41_21800 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D R1T41_07290 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D R1T41_03500 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D R1T41_15410 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D R1T41_08540 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D R1T41_01085 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D R1T41_12730 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D R1T41_14975 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D R1T41_19965 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D R1T41_17475 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D R1T41_16900 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D R1T41_08865 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D R1T41_02315 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D R1T41_08860 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D R1T41_08855 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D R1T41_07295 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D R1T41_09175 ion transporter K10716 kch; voltage-gated potassium channel
D R1T41_11260 ion transporter K08714 VGSC; voltage-gated sodium channel
D R1T41_06520 ammonium transporter K03320 amt; ammonium transporter, Amt family
D R1T41_06525 ammonium transporter K03320 amt; ammonium transporter, Amt family
D R1T41_02425 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_06180 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_08370 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_09045 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_09050 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_09765 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_11230 glutathione binding-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_20825 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D R1T41_13845 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D R1T41_09720 DUF3772 domain-containing protein K05802 mscK; potassium-dependent mechanosensitive channel
D R1T41_16325 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D R1T41_12130 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D R1T41_18090 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D R1T41_11370 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D R1T41_04490 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_12280 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_16600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_18675 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D R1T41_04495 OmpA family protein K02557 motB; chemotaxis protein MotB
D R1T41_12435 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_15575 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D R1T41_16595 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_18680 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_20430 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D R1T41_20420 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D R1T41_20425 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D R1T41_15685 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D R1T41_15690 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D R1T41_03220 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D R1T41_09715 CorA family divalent cation transporter K16074 zntB; zinc transporter
D R1T41_14740 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D R1T41_00180 mercuric transporter MerT family protein K08363 merT; mercuric ion transport protein
D R1T41_00175 cation transporter K08364 merP; periplasmic mercuric ion binding protein
D R1T41_00170 merF; mercury resistance system transport protein MerF K19058 merC; mercuric ion transport protein
D R1T41_10495 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D R1T41_20340 outer membrane beta-barrel protein K16079 omp31; outer membrane immunogenic protein
D R1T41_16330 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D R1T41_06855 OmpP1/FadL family transporter K06076 fadL; long-chain fatty acid transport protein
D R1T41_11925 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein
D R1T41_08085 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D R1T41_10735 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D R1T41_20400 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D R1T41_01955 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R1T41_03000 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R1T41_10600 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R1T41_13555 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R1T41_15180 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_01455 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D R1T41_19010 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D R1T41_21335 PQQ-binding-like beta-propeller repeat protein K17713 bamB; outer membrane protein assembly factor BamB
D R1T41_03415 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D R1T41_19835 autotransporter assembly complex family protein K07278 tamA; translocation and assembly module TamA
D R1T41_19830 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D R1T41_07315 LptA/OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D R1T41_07320 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D R1T41_21195 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D R1T41_07555 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D R1T41_08050 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein
D R1T41_08710 CidA/LrgA family protein K06518 cidA; holin-like protein
D R1T41_09850 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D R1T41_06425 multidrug efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
D R1T41_13400 DoxX family protein K18305 mexG; transmembrane protein
D R1T41_13635 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D R1T41_12825 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump
D R1T41_19290 multidrug efflux RND transporter permease subunit K19585 oqxB; multidrug efflux pump
D R1T41_16040 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D R1T41_01005 sugE; quaternary ammonium compound efflux SMR transporter SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D R1T41_11160 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D R1T41_03185 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D R1T41_12140 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D R1T41_05620 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D R1T41_02210 Na+/H+ antiporter NhaC family protein K07084 yuiF; putative amino acid transporter
D R1T41_16880 L-lactate permease K03303 lutP; lactate permease
D R1T41_05360 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D R1T41_05710 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D R1T41_12550 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D R1T41_03545 sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D R1T41_06115 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D R1T41_06140 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D R1T41_06265 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D R1T41_05365 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D R1T41_08905 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D R1T41_09230 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D R1T41_09250 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D R1T41_08910 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D R1T41_18420 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D R1T41_15565 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D R1T41_03495 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D R1T41_06990 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D R1T41_11580 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D R1T41_08760 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D R1T41_15395 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D R1T41_14455 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; C4-dicarboxylate-binding protein DctP
D R1T41_15430 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D R1T41_15425 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D R1T41_14460 TRAP transporter small permease K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D R1T41_11195 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_15420 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_20305 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_03135 TRAP transporter large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_03915 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_14465 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_15210 TRAP transporter large permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D R1T41_08970 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein
D R1T41_19810 TRAP transporter large permease K21393 yiaN; TRAP-type transport system large permease protein
D R1T41_11200 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D R1T41_19815 TRAP transporter small permease K21394 yiaM; TRAP-type transport system small permease protein
D R1T41_11005 TRAP transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D R1T41_19805 DctP family TRAP transporter solute-binding subunit K21395 yiaO; TRAP-type transport system periplasmic protein
D R1T41_20295 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D R1T41_11210 dctP; TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D R1T41_21620 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D R1T41_09875 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D R1T41_04805 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D R1T41_04800 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D R1T41_04795 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D R1T41_04790 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D R1T41_04785 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D R1T41_04780 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D R1T41_07480 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D R1T41_00930 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D R1T41_07130 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D R1T41_09655 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D R1T41_10270 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D R1T41_17430 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D R1T41_15765 AEC family transporter K24180 mleP; malate permease and related proteins
D R1T41_17500 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D R1T41_06195 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D R1T41_11855 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D R1T41_14020 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D R1T41_16350 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D R1T41_06835 LysE family translocator K05835 rhtC; threonine efflux protein
D R1T41_07630 LysE family translocator K05835 rhtC; threonine efflux protein
D R1T41_07955 LysE family translocator K05835 rhtC; threonine efflux protein
D R1T41_11965 LysE family transporter K05835 rhtC; threonine efflux protein
D R1T41_12075 LysE family translocator K05835 rhtC; threonine efflux protein
D R1T41_13780 LysE family translocator K05835 rhtC; threonine efflux protein
D R1T41_09925 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D R1T41_09920 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D R1T41_01330 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_01855 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_06925 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_07100 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_07125 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_08660 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D R1T41_07095 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D R1T41_07090 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_07115 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_01860 tricarboxylate transporter K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_06935 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_08670 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D R1T41_03030 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D R1T41_05700 MarC family protein K05595 marC; multiple antibiotic resistance protein
D R1T41_03270 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D R1T41_14375 high frequency lysogenization protein HflD K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D R1T41_15865 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D R1T41_20415 energy transducer TonB K03832 tonB; periplasmic protein TonB
D R1T41_15705 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D R1T41_15700 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D R1T41_00210 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D R1T41_05065 protein-disulfide reductase DsbD family protein K08344 scsB; suppressor for copper-sensitivity B
D R1T41_01090 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D R1T41_12725 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D R1T41_05680 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D R1T41_08100 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D R1T41_17130 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D R1T41_11485 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D R1T41_06430 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D R1T41_13630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R1T41_12830 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system
D R1T41_19295 efflux RND transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system
D R1T41_01245 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D R1T41_01430 polysaccharide biosynthesis tyrosine autokinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D R1T41_13745 TspO/MBR family protein K05770 TSPO; translocator protein
D R1T41_12600 entericidin K16348 ecnB; entericidin B
D R1T41_04895 cytochrome c-type biogenesis CcmF C-terminal domain-containing protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D R1T41_09845 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D R1T41_07965 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D R1T41_05920 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D R1T41_02460 MipA/OmpV family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:tlu02044]
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_05685 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_08095 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_17125 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D R1T41_05680 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D R1T41_08100 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D R1T41_17130 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D R1T41_11480 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D R1T41_11475 ABC transporter transmembrane domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D R1T41_11485 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D R1T41_09980 YggT family protein K02221 yggT; YggT family protein
D R1T41_16295 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D R1T41_18955 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D R1T41_12270 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D R1T41_12500 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D R1T41_12465 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D R1T41_12295 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D R1T41_12290 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D R1T41_12210 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D R1T41_12285 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_21380 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_12455 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D R1T41_12450 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D R1T41_12490 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D R1T41_12495 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D R1T41_00030 DUF87 domain-containing protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D R1T41_00065 ATPase, T2SS/T4P/T4SS family K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D R1T41_19270 conjugal transfer protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D R1T41_02275 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D R1T41_19260 trbB; P-type conjugative transfer ATPase TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D R1T41_19255 TrbC/VirB2 family protein K20528 trbC; type IV secretion system protein TrbC
D R1T41_19250 VirB3 family type IV secretion system protein K20529 trbD; type IV secretion system protein TrbD
D R1T41_19245 trbE; conjugal transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D R1T41_19225 trbF; conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D R1T41_19220 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D R1T41_19215 TrbI/VirB10 family protein K20533 trbI; type IV secretion system protein TrbI
D R1T41_19230 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D R1T41_05575 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D R1T41_07705 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D R1T41_18065 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D R1T41_17850 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D R1T41_14520 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D R1T41_18070 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D R1T41_18905 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D R1T41_14685 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D R1T41_10100 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D R1T41_11535 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D R1T41_18060 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D R1T41_11510 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D R1T41_18020 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D R1T41_18025 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
C 02042 Bacterial toxins [BR:tlu02042]
D R1T41_10495 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tlu02022]
D R1T41_07910 ATP-binding protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D R1T41_05370 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D R1T41_10940 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D R1T41_04115 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D R1T41_04120 response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D R1T41_03680 sensor histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D R1T41_03675 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D R1T41_00660 response regulator transcription factor K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D R1T41_07060 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D R1T41_01865 response regulator transcription factor K07774 tctD; two-component system, OmpR family, response regulator TctD
D R1T41_08840 stimulus-sensing domain-containing protein K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D R1T41_08835 response regulator transcription factor K14981 chvI; two-component system, OmpR family, response regulator ChvI
D R1T41_01235 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D R1T41_01240 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D R1T41_07065 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D R1T41_19585 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D R1T41_21605 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D R1T41_05435 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D R1T41_05430 cache domain-containing protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D R1T41_18440 ATP-binding protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D R1T41_18435 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D R1T41_18430 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D R1T41_18425 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D R1T41_08830 cache domain-containing protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D R1T41_15440 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D R1T41_08825 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D R1T41_15435 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D R1T41_12180 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R1T41_12190 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12195 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R1T41_12510 ATP-binding protein K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D R1T41_12205 response regulator transcription factor K13584 ctrA; two-component system, cell cycle response regulator CtrA
D R1T41_15890 response regulator K19622 phcR; two-component system, response regulator PhcR
D R1T41_21790 CmpA/NrtA family ABC transporter substrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D R1T41_21795 ANTAR domain-containing protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:tlu02035]
D R1T41_12180 chemotaxis protein CheW K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D R1T41_12185 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D R1T41_04725 chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D R1T41_12200 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D R1T41_12195 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D R1T41_12190 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12420 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D R1T41_12425 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D R1T41_03160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_03165 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_05160 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06090 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06540 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_06810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_08440 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_08700 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_11765 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_13190 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_13755 cache domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_15540 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_15905 PAS domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_16150 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_16605 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_17465 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_18320 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_20955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_00640 HAMP domain-containing methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D R1T41_12290 FliH/SctL family protein K02411 fliH; flagellar assembly protein FliH
D R1T41_12210 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D R1T41_12215 flagellar FliJ family protein K02413 fliJ; flagellar protein FliJ
D R1T41_12455 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D R1T41_12450 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D R1T41_12490 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D R1T41_12495 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D R1T41_12270 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D R1T41_12500 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D R1T41_19180 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D R1T41_12405 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D R1T41_12285 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_21380 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D R1T41_12295 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D R1T41_12365 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D R1T41_12385 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D R1T41_12380 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D R1T41_12400 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D R1T41_12485 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D R1T41_12475 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D R1T41_12480 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D R1T41_09115 FlgD immunoglobulin-like domain containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D R1T41_12305 flagellar hook capping FlgD N-terminal domain-containing protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D R1T41_12395 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D R1T41_12390 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D R1T41_12360 rod-binding protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D R1T41_09120 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D R1T41_12300 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D R1T41_09130 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D R1T41_12350 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D R1T41_09135 flagellin K02397 flgL; flagellar hook-associated protein 3 FlgL
D R1T41_09085 flagellin K02406 fliC; flagellin
D R1T41_12330 flagellin K02406 fliC; flagellin
D R1T41_12335 flagellin K02406 fliC; flagellin
D R1T41_09090 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D R1T41_12320 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D R1T41_12315 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D R1T41_04490 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_12280 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_16600 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA
D R1T41_18675 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D R1T41_04495 OmpA family protein K02557 motB; chemotaxis protein MotB
D R1T41_12435 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_15575 peptidoglycan -binding protein K02557 motB; chemotaxis protein MotB
D R1T41_16595 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_18680 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D R1T41_08945 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D R1T41_12340 fliW; flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D R1T41_12325 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D R1T41_12265 GTP-binding protein K02404 flhF; flagellar biosynthesis protein FlhF
D R1T41_12260 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tlu04812]
D R1T41_14890 amrB; AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D R1T41_14005 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R1T41_03405 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R1T41_03400 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D R1T41_07575 ParA family protein K03496 parA; chromosome partitioning protein
D R1T41_19355 parA; ParA family partition ATPase K03496 parA; chromosome partitioning protein
D R1T41_21020 division plane positioning ATPase MipZ K03496 parA; chromosome partitioning protein
D R1T41_00405 AAA family ATPase K03496 parA; chromosome partitioning protein
D R1T41_07570 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tlu04147]
D R1T41_11440 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D R1T41_18890 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D R1T41_15610 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D R1T41_10170 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D R1T41_16300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D R1T41_16240 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D R1T41_21400 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D R1T41_07230 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D R1T41_19605 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D R1T41_13100 SMP-30/gluconolactonase/LRE family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D R1T41_14090 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D R1T41_14510 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R1T41_14575 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D R1T41_07850 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D R1T41_02250 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_04840 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_06860 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D R1T41_04225 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_06065 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D R1T41_05165 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R1T41_08870 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D R1T41_14690 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D R1T41_16620 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D R1T41_05240 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D R1T41_08690 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D R1T41_01010 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D R1T41_00935 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D R1T41_09755 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_15825 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_17580 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_19635 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_20535 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D R1T41_18630 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D R1T41_10985 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D R1T41_06170 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D R1T41_20660 D-2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_20945 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D R1T41_06715 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D R1T41_09680 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_18865 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D R1T41_05215 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D R1T41_21905 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D R1T41_14315 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D R1T41_18910 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:tlu02048]
D R1T41_08640 type I restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D R1T41_08630 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D R1T41_08620 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D R1T41_12880 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D R1T41_10345 site-specific DNA-methyltransferase K13581 ccrM; modification methylase [EC:2.1.1.72]
D R1T41_14920 restriction endonuclease K07448 mrr; restriction system protein
D R1T41_00525 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D R1T41_00520 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF
D R1T41_13460 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D R1T41_00510 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D R1T41_13465 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D R1T41_06035 pspB; envelope stress response membrane protein PspB K03970 pspB; phage shock protein B
D R1T41_16230 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D R1T41_16235 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D R1T41_00505 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D R1T41_00500 Arc family DNA-binding protein K21495 fitA; antitoxin FitA
D R1T41_03405 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D R1T41_14005 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D R1T41_18725 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D R1T41_16220 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D R1T41_12045 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_18960 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D R1T41_18270 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D R1T41_20760 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D R1T41_20765 cysteine desulfurase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tlu01504]
D R1T41_21115 GNAT family N-acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D R1T41_14975 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D R1T41_12505 bla; class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D R1T41_08000 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D R1T41_13630 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D R1T41_13635 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D R1T41_19525 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D R1T41_15965 TolC family protein K12340 tolC; outer membrane protein
D R1T41_17930 TolC family outer membrane protein K12340 tolC; outer membrane protein
D R1T41_06430 efflux RND transporter periplasmic adaptor subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D R1T41_06425 multidrug efflux RND transporter permease subunit K18902 bpeF; multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tlu00537]
D R1T41_16240 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:tlu03200]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tlu03100]
D R1T41_16270 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D R1T41_14065 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R1T41_14060 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D R1T41_06470 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D R1T41_07345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R1T41_11360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D R1T41_03835 tRNA-Ile K14230 tRNA-Met; tRNA Met
D R1T41_02900 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D R1T41_14515 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D R1T41_03365 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D R1T41_03370 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D R1T41_10790 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D R1T41_15465 aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D R1T41_03450 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D R1T41_04370 transketolase C-terminal domain-containing protein K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D R1T41_09870 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D R1T41_15555 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D R1T41_10925 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D R1T41_10920 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D R1T41_04930 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D R1T41_19595 FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D R1T41_03295 zinc-dependent alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D R1T41_03820 zinc-dependent alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D R1T41_06240 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D R1T41_07615 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D R1T41_14725 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D R1T41_15495 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D R1T41_17750 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D R1T41_21490 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D R1T41_05170 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D R1T41_13770 glutathione binding-like protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D R1T41_13775 glutathione S-transferase family protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D R1T41_10405 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D R1T41_03940 msrP; protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D R1T41_12760 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D R1T41_16480 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D R1T41_20185 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D R1T41_20805 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D R1T41_13140 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D R1T41_03960 carboxymuconolactone decarboxylase family protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D R1T41_03965 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D R1T41_07025 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D R1T41_12700 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D R1T41_02375 phytanoyl-CoA dioxygenase family protein K21615 E1.14.11.57; L-proline 4-hydroxylase [EC:1.14.11.57]
D R1T41_13175 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K22616 olsC; ornithine lipid ester-linked acyl 2-hydroxylase [EC:1.14.11.58]
D R1T41_12245 2OG-Fe(II) oxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D R1T41_00165 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D R1T41_18085 FAD-dependent oxidoreductase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D R1T41_04100 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D R1T41_08715 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D R1T41_09880 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D R1T41_14900 amrS; AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D R1T41_17920 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D R1T41_18045 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D R1T41_09620 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D R1T41_10040 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D R1T41_10190 methyltransferase domain-containing protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D R1T41_15985 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D R1T41_13520 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D R1T41_08055 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D R1T41_08030 lysophospholipid acyltransferase family protein K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D R1T41_15345 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D R1T41_08785 GNAT family N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D R1T41_19865 GNAT family N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D R1T41_20100 N-acetyltransferase family protein K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D R1T41_20930 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D R1T41_18685 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D R1T41_08025 GNAT family N-acyltransferase K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D R1T41_20055 alpha-amylase family glycosyl hydrolase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D R1T41_04060 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D R1T41_07685 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D R1T41_20800 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D R1T41_11350 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D R1T41_15000 CBASS cGAMP synthase K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D R1T41_07425 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D R1T41_01535 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D R1T41_15680 YbgC/FadM family acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D R1T41_19775 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D R1T41_15130 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D R1T41_07050 EAL domain-containing response regulator K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D R1T41_03080 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D R1T41_18360 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D R1T41_14250 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D R1T41_01840 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D R1T41_06010 serine hydrolase domain-containing protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D R1T41_20990 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D R1T41_03190 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D R1T41_02190 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D R1T41_08775 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D R1T41_02365 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D R1T41_10430 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D R1T41_04270 hypothetical protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D R1T41_16585 SAM-dependent chlorinase/fluorinase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D R1T41_19505 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D R1T41_01785 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D R1T41_10125 heavy metal translocating P-type ATPase metal-binding domain-containing protein K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D R1T41_14175 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D R1T41_02440 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D R1T41_16700 acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D R1T41_01340 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D R1T41_20735 ferredoxin family 2Fe-2S iron-sulfur cluster binding protein K04755 fdx; ferredoxin, 2Fe-2S
D R1T41_04710 ferredoxin family protein K05524 fdxA; ferredoxin
D R1T41_20755 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D R1T41_01875 tcuB; tricarballylate utilization 4Fe-4S protein TcuB K13795 citB; citrate/tricarballylate utilization protein
D R1T41_01880 tcuA; FAD-dependent tricarballylate dehydrogenase TcuA K13796 cobZ; tricarballylate dehydrogenase
D R1T41_03995 chaperone NapD K02570 napD; periplasmic nitrate reductase NapD
D R1T41_03990 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D R1T41_03985 napE; periplasmic nitrate reductase, NapE protein K02571 napE; periplasmic nitrate reductase NapE
D R1T41_04010 cytochrome c3 family protein K02569 napC; cytochrome c-type protein NapC
D R1T41_05210 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D R1T41_21900 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D R1T41_07750 EI24 domain-containing protein K06203 cysZ; CysZ protein
D R1T41_07510 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D R1T41_04380 lysylphosphatidylglycerol synthase transmembrane domain-containing protein K07027 K07027; glycosyltransferase 2 family protein
D R1T41_13410 cell wall hydrolase K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D R1T41_08340 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D R1T41_06705 heme biosynthesis HemY N-terminal domain-containing protein K02498 hemY; HemY protein
D R1T41_09190 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D R1T41_02185 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D R1T41_18855 type II toxin-antitoxin system RatA family toxin K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D R1T41_01915 aldolase/citrate lyase family protein K23376 sbnG; staphyloferrin B biosynthesis citrate synthase
C 99999 Others
D R1T41_07030 DoxX family protein K15977 K15977; putative oxidoreductase
D R1T41_20220 DoxX family protein K15977 K15977; putative oxidoreductase
D R1T41_16155 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
D R1T41_17875 acetate--CoA ligase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D R1T41_13685 cold-shock protein K03704 cspA; cold shock protein
D R1T41_14045 cold-shock protein K03704 cspA; cold shock protein
D R1T41_06515 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D R1T41_06760 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D R1T41_15875 rbbA; ribosome-associated ATPase/putative transporter RbbA K13926 rbbA; ribosome-dependent ATPase
D R1T41_17260 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D R1T41_20975 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D R1T41_19490 tig; trigger factor K03545 tig; trigger factor
D R1T41_16345 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D R1T41_05780 urease accessory protein UreE K03187 ureE; urease accessory protein
D R1T41_05775 urease accessory protein UreF K03188 ureF; urease accessory protein
D R1T41_05770 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D R1T41_05800 urease accessory protein UreD K03190 ureD; urease accessory protein
D R1T41_18815 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D R1T41_07800 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D R1T41_08235 proteasome-type protease K07395 K07395; putative proteasome-type protease
D R1T41_20550 OsmC family protein K07397 yhfA; putative redox protein
D R1T41_05905 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D R1T41_10915 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D R1T41_02450 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D R1T41_19430 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D R1T41_08770 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D R1T41_07255 YraN family protein K07460 yraN; putative endonuclease
D R1T41_13385 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D R1T41_21845 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D R1T41_17410 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D R1T41_14720 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D R1T41_17235 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D R1T41_19450 transposase K07486 K07486; transposase
D R1T41_08600 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase
D R1T41_09395 IS3 family transposase K07497 K07497; putative transposase
D R1T41_00315 IS3 family transposase K07497 K07497; putative transposase
D R1T41_00555 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase
D R1T41_00560 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D R1T41_06040 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D R1T41_09005 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D R1T41_09420 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D R1T41_21890 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D R1T41_03035 anion permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D R1T41_04860 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D R1T41_01080 alanine/glycine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D R1T41_18460 septation protein A K06190 ispZ; intracellular septation protein
D R1T41_14425 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D R1T41_10215 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D R1T41_13920 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D R1T41_07285 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D R1T41_09600 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator
D R1T41_05705 HPP family protein K07168 K07168; CBS domain-containing membrane protein
D R1T41_08040 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D R1T41_09860 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D R1T41_14435 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D R1T41_03550 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D R1T41_03525 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D R1T41_06505 OmpW family protein K07275 ompW; outer membrane protein
D R1T41_15880 efflux RND transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D R1T41_15970 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D R1T41_04890 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D R1T41_04905 cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D R1T41_09840 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D R1T41_05375 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D R1T41_06910 glucan biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D R1T41_11620 glucan biosynthesis protein D K03670 mdoG; periplasmic glucans biosynthesis protein
D R1T41_18465 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D R1T41_04985 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D R1T41_09475 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D R1T41_09290 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D R1T41_02070 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D R1T41_14225 imelysin family protein K07231 K07231; putative iron-regulated protein
D R1T41_00285 copper resistance protein B K07233 pcoB; copper resistance protein B
D R1T41_14915 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D R1T41_21300 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D R1T41_07445 glucosaminidase domain-containing protein K03796 bax; Bax protein
D R1T41_21785 glucosaminidase domain-containing protein K03796 bax; Bax protein
D R1T41_17515 MlaD family protein K06192 pqiB; paraquat-inducible protein B
D R1T41_16995 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D R1T41_04095 tRNA-binding protein K06878 K06878; tRNA-binding protein
D R1T41_19650 group III truncated hemoglobin K06886 glbN; hemoglobin
D R1T41_15975 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D R1T41_09075 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D R1T41_14810 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D R1T41_17980 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D R1T41_15280 YihY family inner membrane protein K07058 K07058; membrane protein
D R1T41_07710 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D R1T41_07795 VOC family protein K04750 phnB; PhnB protein
D R1T41_13035 SlyX family protein K03745 slyX; SlyX protein
D R1T41_01105 DedA family protein K03975 dedA; membrane-associated protein
D R1T41_17510 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D R1T41_18240 YchJ family protein K09858 K09858; SEC-C motif domain protein
D R1T41_14115 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA
C 99997 Function unknown
D R1T41_08915 HD domain-containing protein K06885 K06885; uncharacterized protein
D R1T41_07605 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D R1T41_15930 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D R1T41_16690 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D R1T41_06410 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D R1T41_02395 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D R1T41_18055 ATP-binding protein K06923 K06923; uncharacterized protein
D R1T41_16340 CoA-binding protein K06929 K06929; uncharacterized protein
D R1T41_09155 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D R1T41_09610 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D R1T41_15095 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D R1T41_18295 M14 family metallopeptidase K06987 K06987; uncharacterized protein
D R1T41_07840 VOC family protein K06991 K06991; uncharacterized protein
D R1T41_02700 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D R1T41_02430 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D R1T41_03205 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D R1T41_13485 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D R1T41_20780 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D R1T41_13900 alpha/beta family hydrolase K07020 K07020; uncharacterized protein
D R1T41_15560 VOC family protein K07032 K07032; uncharacterized protein
D R1T41_09370 amidohydrolase family protein K07045 K07045; uncharacterized protein
D R1T41_01780 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D R1T41_02955 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D R1T41_08815 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D R1T41_09535 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D R1T41_20605 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D R1T41_00630 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D R1T41_09895 permease K07089 K07089; uncharacterized protein
D R1T41_19305 permease K07089 K07089; uncharacterized protein
D R1T41_03475 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D R1T41_08545 TSUP family transporter K07090 K07090; uncharacterized protein
D R1T41_12025 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D R1T41_16985 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D R1T41_17725 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D R1T41_06940 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D R1T41_02350 PhoX family phosphatase K07093 K07093; uncharacterized protein
D R1T41_08470 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D R1T41_08475 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D R1T41_13675 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D R1T41_07110 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D R1T41_13890 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D R1T41_06460 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D R1T41_20190 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D R1T41_12445 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D R1T41_13325 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D R1T41_14835 SEL1-like repeat protein K07126 K07126; uncharacterized protein
D R1T41_21355 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D R1T41_00760 tetratricopeptide repeat protein K07126 K07126; uncharacterized protein
D R1T41_06025 AAA family ATPase K07133 K07133; uncharacterized protein
D R1T41_13165 MAPEG family protein K07136 K07136; uncharacterized protein
D R1T41_02270 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D R1T41_06490 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D R1T41_11505 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D R1T41_16705 DUF192 domain-containing protein K09005 K09005; uncharacterized protein
D R1T41_03850 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D R1T41_09985 DUF167 family protein K09131 K09131; uncharacterized protein
D R1T41_08435 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D R1T41_09615 DUF1365 family protein K09701 K09701; uncharacterized protein
D R1T41_11850 cupin domain-containing protein K09705 K09705; uncharacterized protein
D R1T41_13720 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D R1T41_06675 YciI family protein K09780 K09780; uncharacterized protein
D R1T41_14430 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D R1T41_04740 YbaN family protein K09790 K09790; uncharacterized protein
D R1T41_06495 Trm112 family protein K09791 K09791; uncharacterized protein
D R1T41_08420 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D R1T41_09585 SIMPL domain-containing protein K09797 K09797; uncharacterized protein
D R1T41_10205 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D R1T41_18925 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D R1T41_17520 PqiC family protein K09857 K09857; uncharacterized protein
D R1T41_17810 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D R1T41_02735 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D R1T41_20950 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D R1T41_09780 DUF484 family protein K09921 K09921; uncharacterized protein
D R1T41_10000 crosslink repair DNA glycosylase YcaQ family protein K09927 K09927; uncharacterized protein
D R1T41_18770 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D R1T41_20230 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D R1T41_02640 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D R1T41_14210 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D R1T41_14815 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D R1T41_20410 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein
D R1T41_11060 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D R1T41_21650 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D R1T41_08290 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D R1T41_13865 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein
D R1T41_10435 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein
D R1T41_02105 cell cycle transcriptional regulator TrcR K09987 K09987; uncharacterized protein
D R1T41_12675 VWA domain-containing protein K09989 K09989; uncharacterized protein
D R1T41_02525 2OG-Fe(II) oxygenase K09990 K09990; uncharacterized protein
D R1T41_17940 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein
D R1T41_15445 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein
D R1T41_14215 imelysin family protein K07338 K07338; uncharacterized protein
D R1T41_08120 RNA-binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 1, 2024