+D GENES KO
#
KEGG Orthology (KO) - Legionella micdadei
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tmc00010]
D LMI_2118 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LMI_2413 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_0231 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LMI_2985 epd; D-erythrose 4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LMI_2986 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LMI_0837 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LMI_2752 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LMI_2987 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LMI_2079 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LMI_1826 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LMI_1825 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_1212 porA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LMI_1213 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LMI_1192 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LMI_2728 yjgB; putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D LMI_0369 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tmc00020]
D LMI_1813 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LMI_1511 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LMI_1871 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LMI_2069 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LMI_0284 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LMI_0285 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_1212 porA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LMI_1213 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LMI_0287 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LMI_0286 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LMI_0282 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LMI_0283 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LMI_0280 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LMI_0281 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LMI_3018 fumC; Fumarate hydratase class II 2 K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LMI_3140 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LMI_0266 accC; Biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D LMI_0806 pycB; Pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D LMI_1826 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LMI_1825 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tmc00030]
D LMI_2118 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LMI_2153 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LMI_2984 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LMI_3023 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LMI_3038 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LMI_0870 putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LMI_1796 putative 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D LMI_0375 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_0299 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LMI_1991 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LMI_1204 putative keto-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_2413 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tmc00040]
D LMI_2226 Exopolygalacturonase. Poly(galacturonate) hydrolase K01184 E3.2.1.15; polygalacturonase [EC:3.2.1.15]
D LMI_1168 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LMI_1169 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LMI_2153 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:tmc00051]
D LMI_2138 xanB; Xanthan biosynthesis protein xanB [Includes: Mannose-6-phosphate isomerase; Mannose-1-phosphate guanylyl transferase] K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LMI_3128 manC; Mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_3103 gca; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LMI_3129 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LMI_3130 GER; putative GDP-L-fucose synthase 2 K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LMI_2413 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_0231 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LMI_0870 putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tmc00052]
D LMI_1074 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LMI_1169 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_2413 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00053 Ascorbate and aldarate metabolism [PATH:tmc00053]
D LMI_1168 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LMI_1269 capI; Protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:tmc00500]
D LMI_1169 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LMI_2047 putative Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LMI_3109 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_2118 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:tmc00620]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LMI_1212 porA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LMI_1213 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LMI_1826 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LMI_1825 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_1192 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LMI_2728 yjgB; putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D LMI_0369 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LMI_1505 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LMI_2295 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1506 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_2987 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LMI_2110 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LMI_0804 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LMI_0803 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LMI_1541 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LMI_1031 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LMI_3020 lldD; L-lactate dehydrogenase [cytochrome] K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D LMI_1373 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D LMI_1354 malS; putative NAD-dependent malic enzyme 3 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LMI_2782 sfcA; NAD-dependent malic enzyme 1 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LMI_0393 Malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LMI_0266 accC; Biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D LMI_0806 pycB; Pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LMI_3018 fumC; Fumarate hydratase class II 2 K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LMI_3140 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LMI_2079 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LMI_1713 mls; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tmc00630]
D LMI_1712 aceA; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D LMI_1713 mls; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LMI_1813 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LMI_1511 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LMI_1871 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_0307 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LMI_0308 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LMI_2265 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D LMI_2683 putative 2-hydroxyacid dehydrogenase, D-isomer specific K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D LMI_0336 Haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LMI_2604 HAD-superfamily hydrolase subfamily IA variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LMI_2705 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D LMI_0615 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D LMI_1767 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LMI_2440 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LMI_2998 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LMI_3000 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LMI_2996 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_2997 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LMI_1204 putative keto-hydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D LMI_2417 Oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D LMI_0274 Formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D LMI_0466 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:tmc00640]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LMI_1505 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LMI_2295 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1506 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1479 Pyruvate dehydrogenase (acetyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LMI_1478 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LMI_0355 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LMI_1477 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_2110 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LMI_0804 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LMI_0803 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LMI_1541 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LMI_0286 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LMI_0287 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LMI_0141 ALDH6A; Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LMI_1511 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D LMI_1512 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D LMI_1871 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LMI_1510 prpB; Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D LMI_1712 aceA; Isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
C 00650 Butanoate metabolism [PATH:tmc00650]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1554 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_2022 crt; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D LMI_0312 conserved protein of unknown function K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LMI_2174 Alpha/beta hydrolase fold-1 K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LMI_2753 Polyhydroxyalkanoic synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LMI_0307 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LMI_0308 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LMI_0282 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LMI_0283 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LMI_0280 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LMI_0281 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LMI_1460 gabD; putative succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LMI_1212 porA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LMI_1213 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LMI_0961 Hmgcl; Hydroxymethylglutaryl-CoA lyase, mitochondrial K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LMI_0957 acsA; Acetoacetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D LMI_1010 bdhA; D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D LMI_1009 adc; putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D LMI_2907 alsS; Acetolactate synthase and Thiamine pyrophosphate K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_3114 ivlB; Acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_2906 Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:tmc00660]
D LMI_2907 alsS; Acetolactate synthase and Thiamine pyrophosphate K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_3114 ivlB; Acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_2906 Alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D LMI_0902 4-hydroxybutyrate coenzyme A transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D LMI_0286 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LMI_0287 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LMI_0900 putative MaoC-like dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D LMI_0901 citE; Citrase lyase beta subunit K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
C 00562 Inositol phosphate metabolism [PATH:tmc00562]
D LMI_1149 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LMI_0141 ALDH6A; Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LMI_0231 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tmc00190]
D LMI_0233 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LMI_0234 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LMI_0235 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LMI_0236 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LMI_0237 nuoE; NADH-quinone oxidoreductase subunit E 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LMI_0238 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LMI_0239 nuoG; NADH-quinone oxidoreductase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LMI_0240 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LMI_0241 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LMI_0242 nqo; NADH-quinone oxidoreductase chain 10 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LMI_0243 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LMI_0244 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LMI_0245 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LMI_0246 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LMI_0282 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LMI_0283 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LMI_0280 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LMI_0281 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LMI_2811 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LMI_2810 petB; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LMI_2809 petC; Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LMI_0915 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LMI_0103 COX; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LMI_0101 ctaD; Cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LMI_0100 coxB; Cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LMI_0102 Cytochrome c oxidase assembly protein ctaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LMI_0914 Cytochrome oxidase assembly family protein (fragment) K02259 COX15; heme a synthase [EC:1.17.99.9]
D LMI_0082 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LMI_1831 conserved membrane protein of unknown function K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LMI_0081 putative cytochrome oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LMI_1830 conserved membrane protein of unknown function K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LMI_0080 Cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D LMI_3153 atpA; ATP synthase subunit alpha 2 K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LMI_3151 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LMI_3152 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LMI_3154 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LMI_3150 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LMI_3157 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LMI_3155 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LMI_3156 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LMI_2297 putative enzyme K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D LMI_0260 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LMI_2877 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tmc00710]
D LMI_0615 Ribulose-bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D LMI_2986 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LMI_2985 epd; D-erythrose 4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_2984 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LMI_3038 rpiA; Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D LMI_0870 putative ribose/galactose isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LMI_0231 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LMI_2153 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LMI_3023 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LMI_0393 Malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:tmc00720]
D LMI_2079 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LMI_0266 accC; Biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D LMI_0806 pycB; Pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LMI_3018 fumC; Fumarate hydratase class II 2 K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LMI_3140 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LMI_0282 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LMI_0283 sdhB; Succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LMI_0280 sdhC; Succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LMI_0281 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LMI_0287 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LMI_0286 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1212 porA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D LMI_1213 2-oxoglutarate synthase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D LMI_2069 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LMI_1871 acn; Aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D LMI_2110 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LMI_0804 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LMI_0803 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LMI_1541 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LMI_1854 folD; Bifunctional protein folD [Includes: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase] K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LMI_2295 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1506 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1505 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:tmc00680]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LMI_2557 frmC; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D LMI_0274 Formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D LMI_2440 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LMI_2683 putative 2-hydroxyacid dehydrogenase, D-isomer specific K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D LMI_2752 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_2413 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D LMI_1505 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D LMI_2295 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1506 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LMI_2079 ppsA; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D LMI_0837 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LMI_1811 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:tmc00910]
D LMI_1611 putative nitric oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D LMI_2837 putative nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D LMI_1462 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_3019 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_1767 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LMI_1312 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LMI_1445 Carbonic anhydrase Mig5 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D LMI_2459 sul; Sulfate transporter K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:tmc00920]
D LMI_1625 doxD; DoxD-like family protein K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2]
D LMI_1359 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LMI_3045 Cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LMI_2230 Putative homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tmc00061]
D LMI_2110 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D LMI_0804 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D LMI_0803 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D LMI_1541 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D LMI_0472 conserved protein of unknown function K02078 acpP; acyl carrier protein
D LMI_1732 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D LMI_1734 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LMI_1735 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LMI_0475 Beta-ketoacyl-acyl-carrier-protein synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LMI_0474 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_0672 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_1731 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_3007 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_1333 yjgI; Uncharacterized oxidoreductase yjgI K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_1733 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_0844 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LMI_2296 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_2619 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_0465 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D LMI_1483 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tmc00071]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_1554 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LMI_1910 fadE; Acyl-coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LMI_2874 fadE; Acyl-coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D LMI_0356 GCDH; Glutaryl-CoA dehydrogenase, mitochondrial K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LMI_1483 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D LMI_2532 Bifunctional protein aas [Includes: 2-acylglycerophosphoethanolamine acyltransferase; Acyl-[acyl-carrier-protein] synthetase] K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LMI_1192 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D LMI_0472 conserved protein of unknown function K02078 acpP; acyl carrier protein
D LMI_1732 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D LMI_1734 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis [PATH:tmc00100]
D LMI_2237 DWF; 7-dehydrocholesterol reductase K00213 DHCR7; 7-dehydrocholesterol reductase [EC:1.3.1.21]
D LMI_2904 Sterol 24-C-methyltransferase K00559 SMT1; sterol 24-C-methyltransferase [EC:2.1.1.41]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tmc00561]
D LMI_0369 yahK; putative oxidoreductase, Zn-dependent and NAD(P)-binding K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D LMI_1816 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LMI_1736 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LMI_0790 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LMI_0303 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:tmc00564]
D LMI_2584 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LMI_1817 glpD; Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D LMI_0790 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LMI_0303 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LMI_2162 ugpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LMI_3141 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D LMI_2532 Bifunctional protein aas [Includes: 2-acylglycerophosphoethanolamine acyltransferase; Acyl-[acyl-carrier-protein] synthetase] K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D LMI_0839 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LMI_1459 Phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D LMI_0817 pssA; CDP-diacylglycerol-serine-O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LMI_3143 psd; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LMI_2603 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LMI_2436 pgpA; Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D LMI_2220 exported protein of unknown function K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D LMI_0224 Phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:tmc00592]
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:tmc01040]
D LMI_0306 oLE; Stearoyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LMI_0696 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LMI_0178 yciA; putative hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tmc00230]
D LMI_2688 putative nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LMI_0792 nudE; ADP-ribose diphosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D LMI_0375 deoB; Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_0299 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LMI_1991 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LMI_0627 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LMI_0626 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D LMI_0625 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LMI_0631 purL; Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D LMI_0629 purQ; Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LMI_0630 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D LMI_2280 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D LMI_2281 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D LMI_0628 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LMI_2088 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LMI_0801 purH; Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LMI_1356 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LMI_1795 xapA; Xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LMI_1836 conserved protein of unknown function K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LMI_1523 Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D LMI_0172 Inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LMI_1901 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LMI_1489 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LMI_0650 Nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LMI_1900 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LMI_2642 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LMI_1116 nrdA; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LMI_1115 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LMI_2341 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D LMI_2639 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LMI_1559 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D LMI_0371 putative Adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LMI_0579 Adenylyl cyclase class-3/4/guanylyl cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LMI_1999 Adenylate cyclase PLUS two component hybrid sensor and regulator K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LMI_2654 putative adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D LMI_0832 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LMI_0834 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D LMI_2762 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D LMI_1819 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LMI_1865 Metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D LMI_3097 apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
C 00240 Pyrimidine metabolism [PATH:tmc00240]
D LMI_0552 Carbamoyl-phosphate synthase large chain (modular protein) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LMI_0986 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LMI_0553 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LMI_2657 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LMI_2552 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LMI_3060 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D LMI_0970 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D LMI_1292 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LMI_2462 putative K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D LMI_1804 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D LMI_1893 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LMI_1489 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LMI_2546 Maf-like protein CPR_2112 K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LMI_2685 conserved protein of unknown function K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D LMI_1951 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D LMI_1809 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LMI_0577 putative Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D LMI_2618 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D LMI_1356 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LMI_2691 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D LMI_2182 indA; Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D LMI_1794 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D LMI_3051 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LMI_1116 nrdA; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LMI_1115 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LMI_1729 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LMI_0644 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LMI_1421 putative thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D LMI_0129 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LMI_1616 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tmc00250]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_2089 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LMI_0124 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LMI_2177 asnA; Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D LMI_1172 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LMI_0555 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LMI_0554 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LMI_0832 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D LMI_2088 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D LMI_2552 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D LMI_1460 gabD; putative succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LMI_1462 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_3019 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_1881 bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LMI_1767 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LMI_0552 Carbamoyl-phosphate synthase large chain (modular protein) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LMI_0986 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LMI_0553 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LMI_2657 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LMI_1226 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LMI_0629 purQ; Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LMI_0176 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LMI_0627 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tmc00260]
D LMI_1062 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LMI_1048 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LMI_2614 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LMI_0330 ltaE; L-allo-threonine aldolase, PLP-dependent K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D LMI_2440 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LMI_2683 putative 2-hydroxyacid dehydrogenase, D-isomer specific K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D LMI_0837 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D LMI_1811 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LMI_1616 ydfG; NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D LMI_2455 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LMI_2454 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D LMI_2998 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LMI_3000 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LMI_2996 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_2997 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D LMI_0817 pssA; CDP-diacylglycerol-serine-O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LMI_2104 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LMI_1631 Threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LMI_1850 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LMI_1851 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tmc00270]
D LMI_1359 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LMI_3045 Cystathionine beta-synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D LMI_1272 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LMI_2656 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LMI_1891 conserved protein of unknown function K00797 speE; spermidine synthase [EC:2.5.1.16]
D LMI_1836 conserved protein of unknown function K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LMI_0908 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_2655 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_1062 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LMI_1048 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LMI_2614 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LMI_2230 Putative homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D LMI_0646 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LMI_2573 conserved protein of unknown function K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LMI_2572 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_0793 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LMI_2104 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D LMI_1811 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tmc00280]
D LMI_0646 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LMI_2164 ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D LMI_1479 Pyruvate dehydrogenase (acetyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LMI_1478 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LMI_0355 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LMI_1477 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_0967 IVD; Isovaleryl-CoA dehydrogenase 2, mitochondrial K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LMI_0140 mmsB; putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D LMI_0141 ALDH6A; Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D LMI_0962 MCCC; Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D LMI_0964 Mccc; Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D LMI_0963 Enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D LMI_0961 Hmgcl; Hydroxymethylglutaryl-CoA lyase, mitochondrial K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LMI_0957 acsA; Acetoacetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tmc00290]
D LMI_1631 Threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LMI_2907 alsS; Acetolactate synthase and Thiamine pyrophosphate K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_3114 ivlB; Acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_0646 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LMI_2164 ldh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:tmc00300]
D LMI_1062 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LMI_1048 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LMI_2614 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LMI_1013 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LMI_0144 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LMI_1268 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LMI_3066 argD; Acetylornithine aminotransferase (ACOAT) K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LMI_1267 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LMI_0486 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LMI_1160 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LMI_0316 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tmc00310]
D LMI_1553 alh; putative aldehyde dehydrogenase family 7 member A1 homolog K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D LMI_0285 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_0356 GCDH; Glutaryl-CoA dehydrogenase, mitochondrial K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1460 gabD; putative succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D LMI_1530 ala; putative D-Ala-amino transferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LMI_2540 dadA; D-amino-acid dehydrogenase K26064 amaD; D-lysine oxidase
C 00220 Arginine biosynthesis [PATH:tmc00220]
D LMI_0555 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LMI_0554 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LMI_1226 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LMI_0629 purQ; Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LMI_1767 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LMI_0552 Carbamoyl-phosphate synthase large chain (modular protein) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LMI_0986 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D LMI_0553 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LMI_2657 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D LMI_1462 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_3019 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_3066 argD; Acetylornithine aminotransferase (ACOAT) K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LMI_2375 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D LMI_3028 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:tmc00330]
D LMI_0093 protein of unknown function K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D LMI_0959 speA; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D LMI_0958 aguA; putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D LMI_0960 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D LMI_1891 conserved protein of unknown function K00797 speE; spermidine synthase [EC:2.5.1.16]
D LMI_0163 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LMI_1888 astA; Arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D LMI_1890 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D LMI_1889 astD; N-succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D LMI_2646 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D LMI_1881 bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LMI_3095 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LMI_3094 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D LMI_1321 Alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LMI_2560 pip; putative proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_1530 ala; putative D-Ala-amino transferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:tmc00340]
D LMI_1937 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D LMI_1944 hisI; Histidine biosynthesis bifunctional protein hisIE [Includes: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphatase] K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D LMI_1942 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D LMI_1941 hisH; Imidazole glycerol phosphate synthase subunit hisH 2 K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D LMI_1943 hisF; Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D LMI_1940 hisB; Histidine biosynthesis bifunctional protein hisB [Includes: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase] K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D LMI_1939 hisC; Histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2325 hisC; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_1938 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D LMI_1746 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LMI_1784 Phenylalanine/histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LMI_1747 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D LMI_2448 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D LMI_0467 S-adenosylhomocysteine deaminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D LMI_0466 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D LMI_2385 conserved protein of unknown function K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:tmc00350]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_1939 hisC; Histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2325 hisC; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2166 lly; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LMI_1360 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D LMI_2168 maiA; putative maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LMI_2167 Fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D LMI_1192 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LMI_1460 gabD; putative succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:tmc00360]
D LMI_2483 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_1939 hisC; Histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2325 hisC; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2166 lly; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LMI_1530 ala; putative D-Ala-amino transferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LMI_0163 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LMI_2790 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:tmc00380]
D LMI_1275 kmo; Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D LMI_0285 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_0356 GCDH; Glutaryl-CoA dehydrogenase, mitochondrial K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_0163 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LMI_2265 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tmc00400]
D LMI_2662 aro; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LMI_1185 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D LMI_0805 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D LMI_0217 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D LMI_1184 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D LMI_1810 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D LMI_2615 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D LMI_1229 pabA; Para-aminobenzoate synthase glutamine amidotransferase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LMI_1921 trpE(G; Anthranilate synthase [Includes: Glutamine amidotransferase] K13503 trpEG; anthranilate synthase [EC:4.1.3.27]
D LMI_1228 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D LMI_1852 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D LMI_1227 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D LMI_1850 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D LMI_1851 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D LMI_1023 pheA; P-protein [Includes: Chorismate mutase; Prephenate dehydratase] K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_1939 hisC; Histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2325 hisC; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2483 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tmc00410]
D LMI_3014 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D LMI_0267 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_0141 ALDH6A; Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:tmc00430]
D LMI_0302 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LMI_1172 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D LMI_1462 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_3019 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LMI_2295 putative phosphate acetyl/butaryl transferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1506 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D LMI_1505 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tmc00450]
D LMI_1272 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D LMI_0993 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LMI_1349 Aminotransferase class V K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D LMI_1121 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LMI_0113 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tmc00460]
D LMI_0302 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LMI_0124 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D LMI_2177 asnA; Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D LMI_2440 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tmc00470]
D LMI_2145 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LMI_1530 ala; putative D-Ala-amino transferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LMI_0322 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LMI_1226 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LMI_0629 purQ; Phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D LMI_2632 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LMI_0318 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LMI_0486 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LMI_1048 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
C 00480 Glutathione metabolism [PATH:tmc00480]
D LMI_0302 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LMI_1564 Oplah; 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D LMI_1311 putative enzyme K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LMI_1822 Carboxylate-amine ligase LPC_0414 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D LMI_2573 conserved protein of unknown function K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D LMI_2572 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D LMI_0980 pepA; Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LMI_0982 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LMI_0216 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LMI_1196 gstB; Glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LMI_0604 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D LMI_2069 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LMI_2777 GPXHA; putative phospholipid hydroperoxide glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D LMI_1891 conserved protein of unknown function K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tmc00520]
D LMI_1723 anmK; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D LMI_2871 Aminoglycoside phosphotransferase involved in cell wall biosynthesis K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D LMI_2872 Mannose-1-phosphate guanyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D LMI_0122 glmU; Bifunctional protein glmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase; Glucosamine-1-phosphate N-acetyltransferase] K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LMI_1241 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LMI_0321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LMI_2794 exported protein of unknown function K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D LMI_0019 Glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LMI_1262 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LMI_0230 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LMI_0176 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LMI_2118 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LMI_2138 xanB; Xanthan biosynthesis protein xanB [Includes: Mannose-6-phosphate isomerase; Mannose-1-phosphate guanylyl transferase] K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LMI_3128 manC; Mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LMI_1269 capI; Protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_1169 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LMI_1168 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LMI_1074 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LMI_3109 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LMI_2889 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:tmc00541]
D LMI_0122 glmU; Bifunctional protein glmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase; Glucosamine-1-phosphate N-acetyltransferase] K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LMI_1075 capL; Protein CapL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D LMI_1805 degT; Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D LMI_2119 galE; UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D LMI_1234 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LMI_1950 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LMI_1233 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LMI_1021 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LMI_3164 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LMI_0943 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LMI_1169 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D LMI_1168 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LMI_3109 rfbF; Glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D LMI_3127 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D LMI_3110 NDP-hexose 3,4-dehydratase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D LMI_3135 ubiB; CDP-6-deoxy-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D LMI_2889 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LMI_2890 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LMI_2133 dTDP-4-deoxyrhamnose-3,5-epimerase (modular protein) K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LMI_2134 rmlD; dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LMI_2138 xanB; Xanthan biosynthesis protein xanB [Includes: Mannose-6-phosphate isomerase; Mannose-1-phosphate guanylyl transferase] K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LMI_3128 manC; Mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LMI_3103 gca; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LMI_3129 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D LMI_3130 GER; putative GDP-L-fucose synthase 2 K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D LMI_2891 WxcM-like (fragment)
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:tmc00540]
D LMI_0845 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LMI_0326 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LMI_0843 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LMI_3008 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1 K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LMI_1485 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LMI_1760 lpxB; Lipid-A-disaccharide synthase 1 K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LMI_0972 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LMI_2493 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LMI_0476 waaM; Putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LMI_1619 Putative Aspartyl/Asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D LMI_0024 Antimicrobial peptide resistance and Lipid A acylation protein PagP (fragment) K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D LMI_2065 putative O-antigen biosynthesis protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:tmc00550]
D LMI_1241 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LMI_0321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LMI_0320 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LMI_0318 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LMI_1160 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LMI_0322 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LMI_0316 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LMI_0838 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LMI_0094 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LMI_0317 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LMI_2076 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LMI_1176 mrcA; Penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase] K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LMI_1572 pbpC; Penicillin binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LMI_0319 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_1756 mrdB; Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_1755 mrdA; Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LMI_1159 ftsI; Peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LMI_1531 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LMI_0346 Serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LMI_2484 putative D-alanyl-meso-diaminopimelate endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:tmc00552]
D LMI_0094 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LMI_0616 LicD family protein (Phosphorylcholine metabolism) K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tmc00543]
D LMI_2702 algI; poly(beta-D-mannuronate) O-acetylase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D LMI_3126 Predicted membrane protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tmc00730]
D LMI_0539 thiD; Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D LMI_1151 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LMI_0538 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LMI_1976 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LMI_0537 thiE; Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D LMI_2437 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D LMI_2857 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LMI_1819 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LMI_0190 Thiaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:tmc00740]
D LMI_1953 ribBA; Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase-2] K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LMI_1955 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LMI_3032 putative 6,7-dimethyl-8-ribityllumazine synthase (Riboflavinsynthase) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LMI_3033 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D LMI_1954 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D LMI_1201 ribF; Riboflavin biosynthesis protein ribF [Includes: Riboflavin kinase; FMN adenylyltransferase] K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D LMI_0538 thiM; Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LMI_1976 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D LMI_2688 putative nucleoside diphosphate pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D LMI_0138 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tmc00750]
D LMI_0292 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LMI_1617 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D LMI_1161 pdxB; Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D LMI_1811 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LMI_2868 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D LMI_1211 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tmc00760]
D LMI_2089 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D LMI_2090 nadA; Quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D LMI_2077 nadC; Nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D LMI_0491 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D LMI_1795 xapA; Xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D LMI_1356 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D LMI_1546 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D LMI_2149 nadE; putative glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D LMI_1058 cinA; Competence-damage inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D LMI_0492 pncA; Pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D LMI_0189 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LMI_2010 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LMI_2011 pntAb; Pyridine nucleotide transhydrogenase subunit alpha 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LMI_2012 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D LMI_1460 gabD; putative succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:tmc00770]
D LMI_2907 alsS; Acetolactate synthase and Thiamine pyrophosphate K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_3114 ivlB; Acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D LMI_0268 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D LMI_0267 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D LMI_1155 coaX; Type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D LMI_0643 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC [Includes: Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate--cysteine ligase] K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D LMI_0301 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LMI_1591 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LMI_2111 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D LMI_0646 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LMI_3014 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tmc00780]
D LMI_2485 conserved protein of unknown function K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D LMI_0475 Beta-ketoacyl-acyl-carrier-protein synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LMI_0474 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_0672 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_1731 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_3007 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_1333 yjgI; Uncharacterized oxidoreductase yjgI K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_1733 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_0844 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LMI_2296 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_2619 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_1597 bioH; Carboxylesterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D LMI_1596 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LMI_1594 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LMI_1598 bioD; Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D LMI_1595 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D LMI_2114 Biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tmc00785]
D LMI_1528 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LMI_2139 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_1826 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D LMI_1825 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LMI_0284 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LMI_0285 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LMI_1479 Pyruvate dehydrogenase (acetyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D LMI_1478 pdhB; Pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D LMI_0355 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D LMI_1477 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D LMI_2998 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LMI_3000 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LMI_2996 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LMI_2997 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tmc00790]
D LMI_0258 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LMI_2667 putative Dihydroneopterin aldolase FolB, kinase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LMI_1498 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D LMI_0229 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D LMI_2867 dhfrIII; Dihydrofolate reductase type 3 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LMI_1542 folC; Bifunctional protein folC [Includes: Folylpolyglutamate synthase; Dihydrofolate synthase] K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LMI_1953 ribBA; Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase-2] K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D LMI_1481 pabB; Para-aminobenzoate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D LMI_2534 putative aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D LMI_0149 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LMI_2326 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LMI_2483 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D LMI_0151 Pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D LMI_2747 conserved protein of unknown function K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LMI_0111 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LMI_0676 7-cyano-7-deazaguanine reductase. PreQ(0) oxidoreductase. PreQ(0) reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:tmc00670]
D LMI_2867 dhfrIII; Dihydrofolate reductase type 3 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LMI_1854 folD; Bifunctional protein folD [Includes: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase] K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LMI_2440 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LMI_0625 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D LMI_0801 purH; Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LMI_2996 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D LMI_0129 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D LMI_2537 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D LMI_2656 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LMI_0908 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_2655 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_2998 gcvPA; putative glycine dehydrogenase [decarboxylating] subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D LMI_3000 gcvPB; putative glycine dehydrogenase [decarboxylating] subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_2997 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tmc00860]
D LMI_2411 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LMI_2489 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D LMI_1501 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LMI_1053 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LMI_2844 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LMI_2845 Uroporphyrinogen III methylase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D LMI_2665 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LMI_1298 hemF; Coproporphyrinogen-III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D LMI_1503 conserved membrane protein of unknown function K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D LMI_0936 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LMI_2846 Uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D LMI_0915 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LMI_0914 Cytochrome oxidase assembly family protein (fragment) K02259 COX15; heme a synthase [EC:1.17.99.9]
D LMI_1392 Ferritin-like domain subfamily K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tmc00130]
D LMI_1798 ubiC; 4-hydroxybenzoate synthetase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D LMI_1797 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LMI_3136 ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D LMI_0138 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LMI_0048 visC; putative oxidoreductase with FAD/NAD(P)-binding domain K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D LMI_1885 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D LMI_0047 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D LMI_0079 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LMI_0029 coq; 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LMI_0013 wrbA; putative conserved flavoprotein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LMI_0388 wrbA; Flavoprotein wrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D LMI_2166 lly; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LMI_3088 Tocopherol O-methyltransferase K05928 E2.1.1.95; tocopherol O-methyltransferase [EC:2.1.1.95]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tmc00900]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_2739 hmgA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D LMI_2749 Mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D LMI_2748 Diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D LMI_0138 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LMI_2740 fni; Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D LMI_0864 Geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LMI_0852 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LMI_0838 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:tmc00907]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_2728 yjgB; putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D LMI_1745 Glucose 1-dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase
D LMI_0961 Hmgcl; Hydroxymethylglutaryl-CoA lyase, mitochondrial K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LMI_2984 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tmc00523]
D LMI_2889 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LMI_2890 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LMI_2133 dTDP-4-deoxyrhamnose-3,5-epimerase (modular protein) K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LMI_2134 rmlD; dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LMI_3112 dTDP-glucose 4,6-dehydratase
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D LMI_2890 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D LMI_2127 blaA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:tmc00332]
D LMI_3095 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D LMI_3094 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tmc00261]
D LMI_1062 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LMI_1048 Bifunctional aspartate kinase/diaminopimelate decarboxylase protein K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D LMI_2614 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LMI_1013 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LMI_0144 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tmc00521]
D LMI_0645 algC; Phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D LMI_1149 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LMI_2889 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LMI_2890 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LMI_2133 dTDP-4-deoxyrhamnose-3,5-epimerase (modular protein) K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D LMI_2134 rmlD; dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D LMI_3112 dTDP-glucose 4,6-dehydratase
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:tmc00525]
D LMI_2889 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D LMI_2890 rmlB; dTDP-glucose 4,6 dehydratase, NAD(P)-binding K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D LMI_3112 dTDP-glucose 4,6-dehydratase
C 00401 Novobiocin biosynthesis [PATH:tmc00401]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_1939 hisC; Histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2325 hisC; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D LMI_1229 pabA; Para-aminobenzoate synthase glutamine amidotransferase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D LMI_1734 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LMI_1333 yjgI; Uncharacterized oxidoreductase yjgI K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_1733 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_2296 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_2619 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D LMI_0472 conserved protein of unknown function K02078 acpP; acyl carrier protein
D LMI_1732 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tmc00999]
D LMI_2656 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D LMI_0217 aroE; Shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tmc00362]
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D LMI_2790 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LMI_1554 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D LMI_0356 GCDH; Glutaryl-CoA dehydrogenase, mitochondrial K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:tmc00627]
D LMI_0163 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D LMI_1031 acyP; Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D LMI_2291 mdlC; Benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D LMI_0138 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tmc00625]
D LMI_1192 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D LMI_2790 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation [PATH:tmc00633]
D LMI_0634 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:tmc00643]
D LMI_1360 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D LMI_2168 maiA; putative maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D LMI_2167 Fumarylacetoacetate hydrolase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D LMI_0163 putative 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:tmc00930]
D LMI_1447 3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D LMI_2790 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:tmc00626]
D LMI_1192 adhA; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D LMI_2558 adhI; Alcohol dehydrogenase class-3 K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:tmc00984]
D LMI_1555 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tmc03020]
D LMI_0429 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LMI_0430 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LMI_0460 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LMI_2641 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tmc03010]
D LMI_16s_rRNA_1 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_16s_rRNA_2 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_16s_rRNA_3 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_23s_rRNA_1 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_23s_rRNA_2 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_23s_rRNA_3 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_5s_rRNA_1 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_5s_rRNA_2 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_5s_rRNA_3 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_1808 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LMI_1895 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LMI_0442 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LMI_0459 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LMI_0453 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LMI_1451 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LMI_0432 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LMI_0450 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LMI_2812 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LMI_0435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LMI_0458 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LMI_0431 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LMI_0457 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LMI_0449 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LMI_0254 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LMI_0574 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LMI_0445 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LMI_1452 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LMI_0440 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LMI_0977 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LMI_0788 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LMI_0425 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LMI_0439 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LMI_0436 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LMI_0437 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LMI_0448 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LMI_0451 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LMI_1454 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LMI_0427 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LMI_0424 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LMI_0428 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LMI_2813 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LMI_0446 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LMI_0455 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LMI_0443 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LMI_0461 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LMI_0452 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LMI_0571 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LMI_2819 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LMI_0858 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LMI_0441 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LMI_0438 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LMI_0447 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LMI_0857 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D LMI_0859 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LMI_0826 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LMI_0444 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LMI_0454 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LMI_0392 50S ribosomal protein L31 (modular protein) K02909 RP-L31; large subunit ribosomal protein L31
D LMI_1737 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LMI_0825 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LMI_3174 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LMI_2820 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LMI_CDS455772D 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tmc00970]
D LMI_tRNA18 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LMI_tRNA32 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LMI_tRNA4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LMI_tRNA22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA24 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA37 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA38 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA43 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LMI_tRNA28 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LMI_tRNA30 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LMI_tRNA42 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LMI_tRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LMI_tRNA34 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LMI_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LMI_tRNA29 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LMI_tRNA7 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LMI_tRNA25 tRNA-His K14226 tRNA-His; tRNA His
D LMI_tRNA10 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LMI_tRNA1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA11 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LMI_tRNA20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LMI_tRNA21 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LMI_tRNA13 tRNA-Met K14230 tRNA-Met; tRNA Met
D LMI_tRNA2 tRNA-Met K14230 tRNA-Met; tRNA Met
D LMI_tRNA41 tRNA-Met K14230 tRNA-Met; tRNA Met
D LMI_tRNA16 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LMI_tRNA23 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LMI_tRNA3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LMI_tRNA40 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LMI_tRNA14 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LMI_tRNA36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LMI_tRNA39 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LMI_tRNA35 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LMI_tRNA5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LMI_tRNA8 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LMI_tRNA9 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LMI_tRNA6 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LMI_tRNA19 tRNA-Val K14237 tRNA-Val; tRNA Val
D LMI_tRNA27 tRNA-Val K14237 tRNA-Val; tRNA Val
D LMI_2411 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LMI_1924 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LMI_1925 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LMI_1923 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LMI_1849 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LMI_1061 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LMI_1602 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LMI_2171 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LMI_0941 glyQ; Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LMI_0942 glyS; Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LMI_2822 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LMI_0846 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LMI_1848 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LMI_0113 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LMI_0341 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LMI_2444 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LMI_1549 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LMI_1202 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LMI_1110 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LMI_2670 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LMI_2466 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LMI_1493 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LMI_2818 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LMI_2817 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LMI_0408 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LMI_1781 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
D LMI_1174 protein of unknown function [HEAT_REPEAT] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1175 protein of unknown function [HEAT-REPEAT DOMAIN][F-box domain] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
C 03008 Ribosome biogenesis in eukaryotes [PATH:tmc03008]
D LMI_2334 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LMI_2855 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tmc03060]
D LMI_0456 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D LMI_0422 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LMI_0232 secG; Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D LMI_2328 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D LMI_2327 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D LMI_2329 conserved exported protein of unknown function K03210 yajC; preprotein translocase subunit YajC
D LMI_3172 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LMI_1581 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LMI_2583 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D LMI_0575 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LMI_misc_RNA_11 SRP_bact K01983 ffs; signal recognition particle 4.5S RNA
D LMI_2767 conserved protein of unknown function K03110 ftsY; fused signal recognition particle receptor
D LMI_0076 tatA; Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D LMI_0075 tatB; putative TatB protein (Twin arginine translocation) K03117 tatB; sec-independent protein translocase protein TatB
D LMI_3101 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D LMI_2335 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LMI_1203 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:tmc04141]
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LMI_0880 HSP16.9C; 16.9 kDa class I heat shock protein 3 K13993 HSP20; HSP20 family protein
D LMI_1609 hspc4; Small heat shock protein C4 K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tmc04122]
D LMI_1151 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LMI_2681 TusA; Sulfurtransferase TusA homolog K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D LMI_1739 mnmA; tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LMI_2680 tRNA methyl transferase-like protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tmc03018]
D LMI_0125 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LMI_2607 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D LMI_2752 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LMI_0255 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LMI_0697 rhlE; ATP-dependent RNA helicase rhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LMI_3068 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LMI_2501 deaD; Cold-shock DEAD box protein A homolog K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LMI_2024 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LMI_3137 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LMI_2660 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D LMI_2389 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LMI_0008 hfq; Protein hfq K03666 hfq; host factor-I protein
D LMI_2877 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LMI_1499 pcnB; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tmc03030]
D LMI_1743 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LMI_2045 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LMI_0587 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LMI_1728 putative DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LMI_1547 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LMI_0981 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LMI_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LMI_2146 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LMI_0786 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LMI_0463 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0741 ssb; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D LMI_2197 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_1744 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LMI_1758 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LMI_3009 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LMI_2053 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tmc03410]
D LMI_0115 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LMI_1886 conserved protein of unknown function K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LMI_1288 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LMI_0304 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LMI_1586 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LMI_0022 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LMI_1803 Bacteriophage related DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LMI_0390 exoA; Exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D LMI_0391 Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D LMI_3009 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LMI_1579 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LMI_2053 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tmc03420]
D LMI_1222 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LMI_0533 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D LMI_0040 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D LMI_2481 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D LMI_0938 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LMI_3009 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LMI_2053 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tmc03430]
D LMI_1056 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D LMI_2802 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D LMI_1604 mutH; DNA mismatch repair protein mutH K03573 mutH; DNA mismatch repair protein MutH
D LMI_0938 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LMI_1224 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LMI_0865 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LMI_1579 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LMI_0463 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0741 ssb; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D LMI_2197 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_2045 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LMI_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LMI_0587 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LMI_1547 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LMI_1728 putative DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LMI_1743 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LMI_0981 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LMI_2053 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LMI_0396 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tmc03440]
D LMI_1579 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LMI_0463 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0741 ssb; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D LMI_2197 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0003 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D LMI_1210 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D LMI_0585 recR; Recombination protein recR K06187 recR; recombination protein RecR
D LMI_1059 recA; Protein recA K03553 recA; recombination protein RecA
D LMI_3009 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LMI_1363 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D LMI_1467 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LMI_1362 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LMI_2677 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LMI_2045 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LMI_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LMI_0587 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LMI_1547 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LMI_1728 putative DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LMI_1743 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LMI_0981 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LMI_0148 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:tmc03450]
D LMI_1627 Probable DNA repair protein K10979 ku; DNA end-binding protein Ku
D LMI_2571 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tmc02010]
D LMI_2060 potD-B; Spermidine/putrescine-binding periplasmic protein 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D LMI_2059 potC; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein
D LMI_2058 potB; Spermidine/putrescine transport system permease protein potB K11071 potB; spermidine/putrescine transport system permease protein
D LMI_2057 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D LMI_3031 ABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D LMI_3030 Glycine betaine transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LMI_1238 Signal peptide protein, toluene tolerance protein Ttg2D K07323 mlaC; phospholipid transport system substrate-binding protein
D LMI_1237 putative ABC transporter-binding protein HI_1085 K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LMI_2743 conserved exported protein of unknown function K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LMI_1236 yrbE; toluene transporter subunit: membrane component of ABC superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LMI_2741 conserved membrane protein of unknown function K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LMI_1239 putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) K07122 mlaB; phospholipid transport system transporter-binding protein
D LMI_1235 yrbF; toluene transporter subunit: ATP-binding component of ABC superfamily K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LMI_2742 Uncharacterized ABC transporter ATP-binding protein HI_1087 K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LMI_2161 Glycerol-3-phosphate binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LMI_1915 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LMI_1914 ugpE; sn-glycerol-3-phosphate transport system permease protein ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LMI_1913 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D LMI_0951 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D LMI_0952 metI; putative D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D LMI_0953 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D LMI_0004 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D LMI_0005 rfbE; O-antigen export system ATP-binding protein rfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LMI_2173 lolC; Lipoprotein-releasing system transmembrane protein lolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D LMI_2172 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LMI_2032 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C
D LMI_2033 ccmB; Heme exporter protein B K02194 ccmB; heme exporter protein B
D LMI_2034 ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LMI_0983 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D LMI_0984 putative YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D LMI_1230 lptB; putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LMI_2764 conserved membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D LMI_0971 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:tmc02060]
D LMI_0126 ptsP; Phosphoenolpyruvate-protein phosphotransferase ptsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D LMI_0818 ptsH; Phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr
D LMI_0821 putative Nitrogen regulatory protein [Includes: Phosphotransferase enzyme IIA component] K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:tmc03070]
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D LMI_1839 lspD; Type II protein secretion LspD K02453 gspD; general secretion pathway protein D
D LMI_1768 xcpS; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D LMI_1770 gspG; pseudopilin, cryptic, general secretion pathway K02456 gspG; general secretion pathway protein G
D LMI_1771 lspH; LspH K02457 gspH; general secretion pathway protein H
D LMI_1772 Ispl; Type II secretory pathway protein LspI K02458 gspI; general secretion pathway protein I
D LMI_1773 lspJ; Type II secretory pathway protein LspJ K02459 gspJ; general secretion pathway protein J
D LMI_1774 Ispk; Type II secretory pathway protein K02460 gspK; general secretion pathway protein K
D LMI_2338 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D LMI_2339 lspM; Type II secretory pathway protein LspM K02462 gspM; general secretion pathway protein M
D LMI_1840 gspE; general secretory pathway component, cryptic K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LMI_2328 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D LMI_2327 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D LMI_0422 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LMI_0232 secG; Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D LMI_0456 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D LMI_2329 conserved exported protein of unknown function K03210 yajC; preprotein translocase subunit YajC
D LMI_3172 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LMI_1581 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LMI_2767 conserved protein of unknown function K03110 ftsY; fused signal recognition particle receptor
D LMI_2583 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D LMI_0575 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LMI_0076 tatA; Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D LMI_0075 tatB; putative TatB protein (Twin arginine translocation) K03117 tatB; sec-independent protein translocase protein TatB
D LMI_3101 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D LMI_2975 lvhB; LvhB2 protein K03197 virB2; type IV secretion system protein VirB2
D LMI_2974 lvhB; Legionella vir-like protein LvhB3 K03198 virB3; type IV secretion system protein VirB3
D LMI_2972 lvhB; Legionella vir-like protein LvhB5 K03200 virB5; type IV secretion system protein VirB5
D LMI_2971 exported protein of unknown function K03202 virB7; type IV secretion system protein VirB7
D LMI_2967 lvhB; Legionella vir-like protein LvhB9 K03204 virB9; type IV secretion system protein VirB9
D LMI_2969 lvhB; Legionella vir-like protein LvhB6 K03201 virB6; type IV secretion system protein VirB6
D LMI_2968 lvhB; Legionella vir-like protein LvhB8 K03203 virB8; type IV secretion system protein VirB8
D LMI_2966 lvhB; Legionella vir-like protein LvhB10 K03195 virB10; type IV secretion system protein VirB10
D LMI_2973 lvhB; Legionella vir-like protein LvhB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D LMI_2965 lvhB; Legionella vir-like protein LvhB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D LMI_2963 lvh1D; putative component of type IV secretion system K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D LMI_2512 IcmH_DotU; component of the Dot/Icm secretion system K11892 impK; type VI secretion system protein ImpK
D LMI_1281 conserved exported protein of unknown function
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tmc02020]
D LMI_1790 Sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LMI_1789 cpxR; Transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LMI_2209 Histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D LMI_1837 degP; Protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D LMI_3044 conserved protein of unknown function K07799 mdtA; membrane fusion protein, multidrug efflux system
D LMI_3043 mdtB; Multidrug resistance protein mdtB K07788 mdtB; multidrug efflux pump
D LMI_3042 mdtC; Multidrug resistance protein mdtC K07789 mdtC; multidrug efflux pump
D LMI_1365 qseC; Histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LMI_1366 qseB; Transcriptional regulatory protein qseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D LMI_1540 fla; Flagellin K02406 fliC; flagellin
D LMI_1103 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D LMI_1008 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D LMI_1104 motA; Flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D LMI_0502 putative sensory box sensor histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_1318 Two component system histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_1371 Putative sensory box sensor histidine kinase/response regulator (fragment) K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2409 Sensory box histidine kinase/response regulator (fragment) K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2956 putative sensory histidine-kinase / response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_0914 Cytochrome oxidase assembly family protein (fragment) K02259 COX15; heme a synthase [EC:1.17.99.9]
D LMI_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D LMI_0349 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_1375 D-alanyl-D-alanine dipeptidase (modular protein) K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_1354 malS; putative NAD-dependent malic enzyme 3 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LMI_2782 sfcA; NAD-dependent malic enzyme 1 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D LMI_2412 gacS_letS; Sensory box histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D LMI_2482 gacA; Response regulator gacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LMI_0769 csrA; Carbon storage regulator homolog K03563 csrA; carbon storage regulator
D LMI_1450 Carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D LMI_2115 csrA; Carbon storage regulator homolog K03563 csrA; carbon storage regulator
D LMI_2976 LvrC K03563 csrA; carbon storage regulator
D LMI_1898 glnD; [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D LMI_1767 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_2292 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D LMI_0824 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D LMI_1029 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D LMI_1417 Sensory box histidine kinase/response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LMI_2043 fleQ; FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LMI_1131 fleS; Histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D LMI_1132 conserved protein of unknown function K10943 flrC; two-component system, response regulator FlrC
D LMI_1226 glsA; Glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D LMI_2811 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LMI_2810 petB; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LMI_2809 petC; Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LMI_0082 cydA; Cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LMI_1831 conserved membrane protein of unknown function K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LMI_0081 putative cytochrome oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LMI_1830 conserved membrane protein of unknown function K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LMI_0080 Cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D LMI_2047 putative Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D LMI_1932 conserved protein of unknown function K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:tmc04146]
D LMI_2425 Phyhd; Phytanoyl-CoA dioxygenase domain-containing protein 1 K00477 PHYH; phytanoyl-CoA hydroxylase [EC:1.14.11.18]
D LMI_1483 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D LMI_2749 Mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D LMI_2069 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LMI_0961 Hmgcl; Hydroxymethylglutaryl-CoA lyase, mitochondrial K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D LMI_2265 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D LMI_3065 sodB; Superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D LMI_2811 petA; Ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tmc02024]
D LMI_2839 8-amino-7-oxononanoate synthase K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D LMI_0008 hfq; Protein hfq K03666 hfq; host factor-I protein
D LMI_1229 pabA; Para-aminobenzoate synthase glutamine amidotransferase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D LMI_0809 Zinc metalloproteinase K01399 lasB; pseudolysin [EC:3.4.24.26]
D LMI_2662 aro; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D LMI_1365 qseC; Histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LMI_1366 qseB; Transcriptional regulatory protein qseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D LMI_0263 conserved membrane protein of unknown function K20265 gadC; glutamate:GABA antiporter
D LMI_1025 Amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LMI_1872 Amino acid transporter K20265 gadC; glutamate:GABA antiporter
D LMI_1483 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D LMI_0376 putative Ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LMI_1955 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D LMI_0273 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_0879 RND efflux system NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_2036 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_3041 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_2052 conserved exported protein of unknown function K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LMI_2051 putative oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LMI_2050 Peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LMI_2470 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LMI_3172 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LMI_0422 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LMI_0232 secG; Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D LMI_0456 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D LMI_2329 conserved exported protein of unknown function K03210 yajC; preprotein translocase subunit YajC
D LMI_1581 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LMI_2767 conserved protein of unknown function K03110 ftsY; fused signal recognition particle receptor
D LMI_2583 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D LMI_0575 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tmc02030]
D LMI_1417 Sensory box histidine kinase/response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LMI_1135 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LMI_1093 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LMI_1094 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LMI_2371 putative surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D LMI_1008 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D LMI_1104 motA; Flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D LMI_1007 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D LMI_1105 motB; Flagellar motor protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tmc02040]
D LMI_1133 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LMI_2361 fliE; Flagellar hook-basal body complex protein fliE 2 K02408 fliE; flagellar hook-basal body complex protein FliE
D LMI_1134 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D LMI_2362 Truncated flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LMI_1135 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LMI_1136 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LMI_2364 putative Truncated flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LMI_1137 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LMI_2365 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LMI_1138 fliJ; Similar to flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D LMI_1869 protein of unknown function K02414 fliK; flagellar hook-length control protein FliK
D LMI_1093 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LMI_1094 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LMI_2371 putative surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D LMI_1095 fliO; Flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ
D LMI_1096 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D LMI_2373 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D LMI_1097 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LMI_2351 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LMI_1098 Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D LMI_2352 putative flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR
D LMI_1100 flhA; putative flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D LMI_2354 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D LMI_1099 flhB; flagellar export pore protein K02401 flhB; flagellar biosynthesis protein FlhB
D LMI_2353 putative flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D LMI_1931 Flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D LMI_1299 flgB; Flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D LMI_2359 putative flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D LMI_1300 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D LMI_2360 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D LMI_1301 flgD; Flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D LMI_2368 putative flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D LMI_1302 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LMI_2369 putative Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LMI_1303 Flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D LMI_2355 putative flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D LMI_1304 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D LMI_2356 Flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D LMI_1305 flgH; Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D LMI_2357 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D LMI_1306 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D LMI_2358 flgI; Flagellar P-ring protein 1 K02394 flgI; flagellar P-ring protein FlgI
D LMI_1307 Peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D LMI_1308 flgK; Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D LMI_1309 flgL; Flagellar hook associated protein type 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D LMI_3058 putative Sodium-type flagellar protein motY precursor K21218 motY; sodium-type flagellar protein MotY
D LMI_1540 fla; Flagellin K02406 fliC; flagellin
D LMI_1538 conserved protein of unknown function K02407 fliD; flagellar hook-associated protein 2
D LMI_1537 fliS; B-type flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS
D LMI_1008 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D LMI_1104 motA; Flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D LMI_1007 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D LMI_1105 motB; Flagellar motor protein K02557 motB; chemotaxis protein MotB
D LMI_1932 conserved protein of unknown function K02398 flgM; negative regulator of flagellin synthesis FlgM
D LMI_1933 Putative flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D LMI_0785 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D LMI_2043 fleQ; FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LMI_0824 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D LMI_1132 conserved protein of unknown function K10943 flrC; two-component system, response regulator FlrC
D LMI_1103 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D LMI_2752 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:tmc04981]
D LMI_2537 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D LMI_2867 dhfrIII; Dihydrofolate reductase type 3 K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LMI_2440 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LMI_0129 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation [PATH:tmc04382]
D LMI_1174 protein of unknown function [HEAT_REPEAT] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1175 protein of unknown function [HEAT-REPEAT DOMAIN][F-box domain] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1746 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D LMI_1784 Phenylalanine/histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis [PATH:tmc05134]
D LMI_2478 enhC; Enhanced entry protein EnhC [TPR domain][sel1-domain][B-lactamase] K15474 enhC; enhanced entry protein EnhC
D LMI_2975 lvhB; LvhB2 protein K03197 virB2; type IV secretion system protein VirB2
D LMI_2389 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LMI_0282 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D LMI_2336 lepA; GTP-binding protein lepA K03596 lepA; GTP-binding protein LepA
D LMI_1540 fla; Flagellin K02406 fliC; flagellin
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tmc01501]
D LMI_2102 ampG; Protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LMI_2796 membrane protein of unknown function K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LMI_0019 Glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LMI_1262 Beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D LMI_2127 blaA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LMI_0272 HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2107 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2442 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2651 putative Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_0271 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_2084 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D LMI_2106 Uncharacterized transporter HI_0895 K18138 acrB; multidrug efflux pump
D LMI_2443 Putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LMI_2652 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_0273 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_0879 RND efflux system NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_2036 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_3041 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D LMI_1176 mrcA; Penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase] K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LMI_1755 mrdA; Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LMI_1159 ftsI; Peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tmc01502]
D LMI_0349 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_1375 D-alanyl-D-alanine dipeptidase (modular protein) K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_0322 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LMI_2145 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LMI_0316 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LMI_0317 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LMI_2076 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tmc01503]
D LMI_0024 Antimicrobial peptide resistance and Lipid A acylation protein PagP (fragment) K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D LMI_0809 Zinc metalloproteinase K01399 lasB; pseudolysin [EC:3.4.24.26]
D LMI_1790 Sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LMI_1789 cpxR; Transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LMI_2803 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LMI_1837 degP; Protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D LMI_0134 dsbA; Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LMI_0272 HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2107 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2442 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2651 putative Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_0271 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_2084 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D LMI_2106 Uncharacterized transporter HI_0895 K18138 acrB; multidrug efflux pump
D LMI_2443 Putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LMI_2652 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D LMI_0845 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tmc01000]
C 01001 Protein kinases [BR:tmc01001]
D LMI_2209 Histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D LMI_1790 Sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LMI_1365 qseC; Histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LMI_0502 putative sensory box sensor histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_1318 Two component system histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_1371 Putative sensory box sensor histidine kinase/response regulator (fragment) K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2409 Sensory box histidine kinase/response regulator (fragment) K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2956 putative sensory histidine-kinase / response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2412 gacS_letS; Sensory box histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D LMI_1131 fleS; Histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tmc01009]
D LMI_0908 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_2655 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_1174 protein of unknown function [HEAT_REPEAT] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1175 protein of unknown function [HEAT-REPEAT DOMAIN][F-box domain] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:tmc01002]
D LMI_1203 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LMI_1518 pilD; Type 4 prepilin-like proteins leader peptide-processing enzyme [Includes: Leader peptidase; N-methyltransferase] K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LMI_1440 conserved protein of unknown function [Peptidase A31, hydrogen uptake protein] K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D LMI_1900 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D LMI_0627 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D LMI_0176 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LMI_1977 Intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D LMI_1448 putative ErfK/YbiS/YcfS/YnhG family protein precursor K16291 erfK; L,D-transpeptidase ErfK/SrfK
D LMI_0216 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D LMI_2982 prlC; Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D LMI_0117 Vibriolysin K08604 hap; vibriolysin [EC:3.4.24.25]
D LMI_1381 Hemagglutinin/protease, zinc metalloprotease K08604 hap; vibriolysin [EC:3.4.24.25]
D LMI_0809 Zinc metalloproteinase K01399 lasB; pseudolysin [EC:3.4.24.26]
D LMI_3010 pepO; Metallopeptidase PepO, peptidase, M13 family K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D LMI_0349 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_1375 D-alanyl-D-alanine dipeptidase (modular protein) K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_2768 Zinc protease (Peptidase, M16 family) K07263 pqqL; zinc protease [EC:3.4.24.-]
D LMI_2769 Zinc protease (Peptidase, M16 family) K07263 pqqL; zinc protease [EC:3.4.24.-]
D LMI_0980 pepA; Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LMI_0982 pepA; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LMI_1887 Glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D LMI_1267 dapE; Succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LMI_0667 Gly-Xaa carboxypeptidase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D LMI_1897 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LMI_0046 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LMI_0211 Bacterial leucyl aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D LMI_0228 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LMI_0541 htpX; Heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LMI_2579 htpX; Protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D LMI_1957 Zn-dependent protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D LMI_0840 putative enzyme K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LMI_2487 Membrane associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D LMI_1837 degP; Protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D LMI_0811 putative subtilisin-like serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D LMI_1531 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LMI_0346 Serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LMI_2484 putative D-alanyl-meso-diaminopimelate endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LMI_2627 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LMI_2625 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LMI_0689 umuD; SOS (Error prone) mutagenesis protein UmuD (RumA) K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LMI_2335 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LMI_1321 Alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LMI_2560 pip; putative proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D LMI_0835 ctpA; Carboxy-terminal-processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LMI_1146 Signal peptide peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D LMI_2041 sohB; putative protease sohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D LMI_0377 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LMI_0302 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D LMI_1118 pmbA; Protein pmbA K03592 pmbA; PmbA protein
D LMI_1221 tldD; putative peptidase K03568 tldD; TldD protein
D LMI_1570 conserved protein of unknown function K06894 yfhM; alpha-2-macroglobulin
D LMI_0830 hflC; Protein hflC K04087 hflC; modulator of FtsH protease HflC
D LMI_0829 hflK; Protein hflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tmc01003]
D LMI_0528 putative integral membrane protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D LMI_1572 pbpC; Penicillin binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LMI_1176 mrcA; Penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase] K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LMI_0319 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_1756 mrdB; Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_1068 Glycosyl transferase group 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D LMI_0693 putative membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tmc01005]
D LMI_0845 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LMI_1760 lpxB; Lipid-A-disaccharide synthase 1 K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LMI_0326 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LMI_0843 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LMI_3008 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1 K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LMI_1485 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LMI_0972 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LMI_0476 waaM; Putative lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LMI_1619 Putative Aspartyl/Asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D LMI_2493 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LMI_0024 Antimicrobial peptide resistance and Lipid A acylation protein PagP (fragment) K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D LMI_1950 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LMI_1021 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LMI_1233 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D LMI_1234 kdsD; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LMI_2065 putative O-antigen biosynthesis protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D LMI_2799 conserved protein of unknown function K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D LMI_3164 gmhA; Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D LMI_0943 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D LMI_2116 wbpL; Glycosyl transferase WbpL K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D LMI_2128 rfbG; dTDP-rhamnosyl transferase rfbG K12991 rfbG; rhamnosyltransferase [EC:2.4.1.-]
D LMI_2135 putative Wzz K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator)
D LMI_2080 wsfH; putative family 2 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LMI_3111 Glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D LMI_3118 wcaA; Glycosyltransferase involved in cell wall biogenesis K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tmc01011]
D LMI_1241 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LMI_0321 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LMI_0320 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LMI_0318 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LMI_1160 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LMI_0322 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LMI_2145 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LMI_2632 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D LMI_0317 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LMI_2076 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LMI_0094 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D LMI_0979 mviN; Virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase
D LMI_1176 mrcA; Penicillin-binding protein 1A [Includes: Penicillin-insensitive transglycosylase; Penicillin-sensitive transpeptidase] K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LMI_1572 pbpC; Penicillin binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D LMI_1755 mrdA; Penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LMI_1159 ftsI; Peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LMI_1531 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LMI_0346 Serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LMI_2484 putative D-alanyl-meso-diaminopimelate endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LMI_0319 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_1756 mrdB; Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_1448 putative ErfK/YbiS/YcfS/YnhG family protein precursor K16291 erfK; L,D-transpeptidase ErfK/SrfK
D LMI_0349 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_1375 D-alanyl-D-alanine dipeptidase (modular protein) K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_2154 Soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LMI_0871 Membrane-bound lytic murein transglycosylase A (MLT) family protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D LMI_1864 mltA; Membrane-bound lytic murein transglycosylase family protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D LMI_0071 conserved exported protein of unknown function K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D LMI_2337 mltB; Membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D LMI_1372 Membrane bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D LMI_1730 Periplasmic solute-binding protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D LMI_1533 conserved exported protein of unknown function K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LMI_2803 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tmc01004]
D LMI_1734 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LMI_1735 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LMI_0475 Beta-ketoacyl-acyl-carrier-protein synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D LMI_0474 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_0672 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_1731 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_3007 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LMI_1333 yjgI; Uncharacterized oxidoreductase yjgI K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_1733 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LMI_0844 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LMI_2296 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_2619 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LMI_0465 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D LMI_0178 yciA; putative hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D LMI_0306 oLE; Stearoyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LMI_0696 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LMI_0139 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D LMI_0957 acsA; Acetoacetyl-coenzyme A synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D LMI_1483 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D LMI_1919 putative acetyltransferase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D LMI_1736 plsX; Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D LMI_0790 plsY; Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D LMI_0303 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tmc01008]
D LMI_2183 2,4-dichlorophenol 6-monooxygenase K14672 whiEVIII; putative polyketide hydroxylase
C 01006 Prenyltransferases [BR:tmc01006]
D LMI_0864 Geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D LMI_0852 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LMI_0838 uppS; Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LMI_2801 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LMI_1797 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LMI_0915 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:tmc01007]
D LMI_2411 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LMI_1849 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LMI_0408 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LMI_1781 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LMI_1848 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LMI_2670 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LMI_0113 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LMI_1202 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LMI_2444 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LMI_1549 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LMI_1110 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LMI_1602 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LMI_2171 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LMI_1493 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LMI_0941 glyQ; Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LMI_0942 glyS; Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LMI_0846 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LMI_2466 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LMI_2822 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LMI_1061 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LMI_2818 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LMI_2817 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LMI_0039 aatA; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LMI_1577 yfdZ; putative aminotransferase, PLP-dependent K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D LMI_1939 hisC; Histidinol-phosphate aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2325 hisC; Histidinol-phosphate aminotransferase 2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D LMI_2455 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D LMI_1596 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D LMI_3066 argD; Acetylornithine aminotransferase (ACOAT) K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D LMI_1594 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D LMI_1501 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D LMI_1530 ala; putative D-Ala-amino transferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D LMI_0646 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LMI_1811 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D LMI_1805 degT; Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tmc00194]
D LMI_3150 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LMI_3151 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LMI_3152 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LMI_3153 atpA; ATP synthase subunit alpha 2 K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LMI_3154 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LMI_3155 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LMI_3156 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LMI_3157 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LMI_3158 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tmc03000]
D LMI_1717 Methylated-DNA/protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LMI_0975 oxyR; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D LMI_0092 putative transcriptional regulator, LysR family K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D LMI_2176 asnC; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D LMI_0494 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D LMI_0376 putative Ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D LMI_0084 Putative transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D LMI_2850 nsrR; HTH-type transcriptional regulator nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D LMI_0198 ydcN; putative DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D LMI_2114 Biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LMI_0298 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_1154 fis; Fis transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_1761 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_0928 Transcription regulator with HTH domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D LMI_2461 Transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D LMI_2043 fleQ; FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LMI_1630 conserved protein of unknown function [YheO domain] K21829 dauR; D-arginine utilization repressor
D LMI_2310 yozG; Uncharacterized HTH-type transcriptional regulator yozG K07727 K07727; putative transcriptional regulator
D LMI_1881 bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LMI_1027 bolA; Protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D LMI_0105 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMI_0345 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMI_0559 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D LMI_0190 Thiaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D LMI_0780 conserved protein of unknown function K07733 alpA; prophage regulatory protein
D LMI_1697 Phage transcriptional regulator, AlpA [Prophage CP4-57 regulatory domain] K07733 alpA; prophage regulatory protein
D LMI_2554 conserved protein of unknown function K07735 algH; putative transcriptional regulator
D LMI_2492 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D LMI_2439 nrdR; transcriptional repressor of nrd genes K07738 nrdR; transcriptional repressor NrdR
D LMI_1687 protein of unknown function [Lambda repressor-like, DNA-binding] K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D LMI_1156 mraZ; Protein mraZ. Putative protein involved in cell division or replication K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tmc03021]
D LMI_0460 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LMI_0429 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LMI_0430 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LMI_2641 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LMI_0785 rpoD; RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D LMI_1358 rpoS; RNA polymerase sigma factor rpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D LMI_2763 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D LMI_0824 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D LMI_1103 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D LMI_3027 rapA; RNA polymerase-associated protein rapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D LMI_0250 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D LMI_2438 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D LMI_0423 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D LMI_2807 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D LMI_2806 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B
D LMI_2492 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D LMI_0987 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D LMI_3137 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tmc03019]
D LMI_1174 protein of unknown function [HEAT_REPEAT] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1175 protein of unknown function [HEAT-REPEAT DOMAIN][F-box domain] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_2607 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D LMI_2334 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LMI_3068 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LMI_2855 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LMI_0697 rhlE; ATP-dependent RNA helicase rhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D LMI_2501 deaD; Cold-shock DEAD box protein A homolog K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LMI_2024 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LMI_2752 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LMI_0255 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LMI_3137 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LMI_2660 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D LMI_2389 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LMI_0008 hfq; Protein hfq K03666 hfq; host factor-I protein
D LMI_2877 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D LMI_1499 pcnB; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D LMI_0125 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LMI_0769 csrA; Carbon storage regulator homolog K03563 csrA; carbon storage regulator
D LMI_1450 Carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D LMI_2115 csrA; Carbon storage regulator homolog K03563 csrA; carbon storage regulator
D LMI_2976 LvrC K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:tmc03011]
D LMI_1808 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LMI_1895 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D LMI_0442 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LMI_0459 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LMI_0453 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LMI_1451 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LMI_0432 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LMI_0450 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LMI_2812 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LMI_0435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LMI_0458 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LMI_0431 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LMI_0457 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LMI_0449 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LMI_0254 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LMI_0574 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LMI_0445 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LMI_1452 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LMI_0440 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LMI_0977 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LMI_0788 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LMI_0425 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LMI_0439 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LMI_0436 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LMI_0437 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LMI_0448 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LMI_0451 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LMI_1454 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LMI_0427 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LMI_0424 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LMI_0428 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LMI_2813 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LMI_0446 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LMI_0455 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LMI_0443 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LMI_0461 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LMI_0452 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LMI_0571 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LMI_2819 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LMI_0858 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LMI_0441 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LMI_0438 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LMI_0447 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LMI_0859 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LMI_0826 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LMI_0444 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LMI_0454 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LMI_0392 50S ribosomal protein L31 (modular protein) K02909 RP-L31; large subunit ribosomal protein L31
D LMI_1737 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LMI_0825 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LMI_3174 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LMI_2820 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LMI_CDS455772D 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LMI_0857 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D LMI_5s_rRNA_1 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_5s_rRNA_2 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_5s_rRNA_3 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_16s_rRNA_1 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_16s_rRNA_2 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_16s_rRNA_3 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_23s_rRNA_1 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_23s_rRNA_2 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_23s_rRNA_3 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tmc03009]
D LMI_2334 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LMI_2855 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D LMI_1209 era; GTP-binding protein era homolog K03595 era; GTPase
D LMI_0860 obg; GTPase obg K03979 obgE; GTPase [EC:3.6.5.-]
D LMI_2492 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D LMI_0250 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D LMI_2438 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D LMI_0423 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D LMI_3099 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LMI_0342 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D LMI_2770 yhhF; putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LMI_3139 rsmE; Ribosomal RNA small subunit methyltransferase E (16S rRNA m3U1498 methyltransferase) K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LMI_0107 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LMI_1157 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LMI_3167 yraL; putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LMI_0944 Ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D LMI_3067 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LMI_0227 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D LMI_1754 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LMI_1945 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D LMI_1374 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D LMI_0016 rlmL; Ribosomal RNA large subunit methyltransferase L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D LMI_0874 putative methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D LMI_1490 yfgB; putative Fe-S containing enzyme K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D LMI_1558 rumA; 23S rRNA (uracil-5-)-methyltransferase rumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LMI_1778 Pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LMI_2605 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D LMI_1835 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LMI_2070 Ribosomal large subunit pseudouridine synthase E (fragment) K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D LMI_1823 Ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D LMI_0712 rimJ; Ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D LMI_0917 rimK; Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D LMI_0573 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D LMI_2392 protein of unknown function K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D LMI_0802 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LMI_2616 yfcB; Uncharacterized adenine-specific methylase yfcB K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D LMI_1867 Cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D LMI_2607 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D LMI_2553 yqgF; Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LMI_2501 deaD; Cold-shock DEAD box protein A homolog K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D LMI_2857 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D LMI_1496 der; GTPase involved in ribosome synthesis and maintenance K03977 engA; GTPase
D LMI_0009 hflX; putative GTPase K03665 hflX; GTPase
D LMI_0807 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LMI_2639 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LMI_0252 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D LMI_0249 rimP; Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D LMI_1753 conserved protein of unknown function K09710 ybeB; ribosome-associated protein
D LMI_1787 ybeY; putative metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D LMI_0226 yhbY; putative RNA-binding protein K07574 yhbY; RNA-binding protein
D LMI_0015 conserved protein of unknown function K09889 yjgA; ribosome-associated protein
D LMI_0823 yhbH; ribosome-associated, sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D LMI_0855 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D LMI_1738 conserved protein of unknown function K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tmc03016]
D LMI_0165 Ribonuclease, T2 family K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D LMI_2856 cca; Multifunctional CCA protein [Includes: CCA-adding enzyme; 2'-nucleotidase; 2',3'-cyclic phosphodiesterase; Phosphatase] K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D LMI_3092 conserved protein of unknown function K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D LMI_3091 conserved protein of unknown function K24956 ZBTB8OS; protein archease
D LMI_2411 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LMI_2466 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LMI_1202 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LMI_1549 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LMI_0113 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LMI_1849 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D LMI_2670 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LMI_1110 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D LMI_1602 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LMI_1061 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LMI_2171 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D LMI_2822 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LMI_0846 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LMI_1848 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LMI_2444 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LMI_1493 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LMI_2818 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LMI_2817 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LMI_0408 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LMI_1781 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LMI_2561 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D LMI_0259 HINT; Histidine triad nucleotide-binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LMI_2393 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LMI_0827 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D LMI_1853 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LMI_0253 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LMI_1151 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LMI_0807 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LMI_2801 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LMI_3171 mnmE; tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LMI_0108 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LMI_3173 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LMI_misc_RNA_14 RNaseP_bact_a K01978 rnpB; RNase P catalytic RNA component
D LMI_3061 rnt; Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D LMI_2644 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LMI_0609 RNA ligase/cyclic nucleotide phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D LMI_2453 yjjK; fused putative transporter subunits of ABC superfamily: ATP-binding components K06020 ettA; energy-dependent translational throttle protein EttA
D LMI_0941 glyQ; Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LMI_0942 glyS; Glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LMI_1918 conserved protein of unknown function K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D LMI_1899 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LMI_1580 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D LMI_0153 putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LMI_1834 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase miaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LMI_0572 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LMI_1150 yfhQ; putative methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D LMI_2563 yibK; putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D LMI_1739 mnmA; tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LMI_2680 tRNA methyl transferase-like protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LMI_2458 ydaO; putative C32 tRNA thiolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D LMI_2681 TusA; Sulfurtransferase TusA homolog K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D LMI_1153 iscA; Iron-binding protein iscA K13628 iscA; iron-sulfur cluster assembly protein
D LMI_1464 Glycine cleavage T protein K06980 ygfZ; tRNA-modifying protein YgfZ
D LMI_1487 tRNA-(Ms(2)io(6)a)-hydrolase(TRNA hydroxylase) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D LMI_1507 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC [Includes: tRNA (mnm(5)s(2)U34)-methyltransferase; FAD-dependent cmnm(5)s(2)U34 oxidoreductase] K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D LMI_2331 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LMI_0111 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LMI_0149 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LMI_2747 conserved protein of unknown function K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LMI_0676 7-cyano-7-deazaguanine reductase. PreQ(0) oxidoreductase. PreQ(0) reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LMI_2854 conserved protein of unknown function K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D LMI_2330 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LMI_2833 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LMI_2109 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LMI_1019 conserved protein of unknown function K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LMI_0789 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LMI_2804 yjeE; ATPase with strong ADP affinity K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LMI_3068 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D LMI_0255 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tmc03012]
D LMI_0251 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LMI_2821 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LMI_2333 Uncharacterized ABC transporter ATP-binding protein HI_0658 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LMI_1894 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D LMI_0421 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D LMI_0434 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D LMI_0433 fusA; Elongation factor G K02355 fusA; elongation factor G
D LMI_2490 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LMI_1892 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D LMI_2491 hemK; Protein methyltransferase hemK homolog K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LMI_0856 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LMI_1119 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LMI_2879 efp; Elongation factor P K02356 efp; elongation factor P
D LMI_0996 poxA; lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D LMI_2878 yjeK; putative lysine aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D LMI_2887 conserved protein of unknown function K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D LMI_1109 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D LMI_2020 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:tmc03110]
D LMI_2067 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D LMI_1145 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LMI_2626 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LMI_0378 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LMI_2660 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D LMI_2389 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LMI_2659 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D LMI_0894 cbpA; Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D LMI_2494 djlA; DnaJ-like protein djlA K05801 djlA; DnaJ like chaperone protein
D LMI_0205 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D LMI_2661 grpE; Protein grpE K03687 GRPE; molecular chaperone GrpE
D LMI_0880 HSP16.9C; 16.9 kDa class I heat shock protein 3 K13993 HSP20; HSP20 family protein
D LMI_1609 hspc4; Small heat shock protein C4 K13993 HSP20; HSP20 family protein
D LMI_2390 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D LMI_1837 degP; Protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D LMI_0228 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LMI_3157 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LMI_2583 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D LMI_0367 conserved exported protein of unknown function K06006 cpxP; periplasmic protein CpxP/Spy
D LMI_1430 hypA; putative hydrogenase nickel incorporation protein hypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D LMI_1431 hypB; Hydrogenase nickel incorporation protein hypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D LMI_2832 ppiB; Peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D LMI_2623 Peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D LMI_2103 mip; Outer membrane protein MIP K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D LMI_2869 surA; Chaperone surA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D LMI_1818 conserved protein of unknown function K03671 TXN; thioredoxin
D LMI_3138 trxA; Thioredoxin K03671 TXN; thioredoxin
D LMI_2582 grxC; Glutaredoxin-3 K03676 grxC; glutaredoxin 3
D LMI_3063 ydhD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D LMI_0134 dsbA; Thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D LMI_2835 dsbB; Disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D LMI_2391 dsbD; Thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D LMI_2029 dsbE; Thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:tmc04131]
D LMI_1489 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_2985 epd; D-erythrose 4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LMI_2987 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LMI_1386 MFS transporter family protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:tmc04121]
C 03051 Proteasome [BR:tmc03051]
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:tmc03032]
D LMI_1744 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LMI_2624 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D LMI_2816 ihfA; Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LMI_3050 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LMI_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D LMI_2146 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LMI_0786 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LMI_0463 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0741 ssb; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D LMI_2197 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_2045 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LMI_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LMI_0981 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LMI_1547 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LMI_1728 putative DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LMI_1743 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LMI_0587 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LMI_1758 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LMI_3009 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LMI_2053 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LMI_0396 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LMI_0223 conserved protein of unknown function K10763 hda; DnaA-homolog protein
D LMI_1812 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LMI_0006 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LMI_3147 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LMI_1045 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LMI_0337 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tmc03036]
D LMI_1174 protein of unknown function [HEAT_REPEAT] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_1175 protein of unknown function [HEAT-REPEAT DOMAIN][F-box domain] K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
D LMI_2334 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_2624 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D LMI_2816 ihfA; Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LMI_3050 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LMI_0894 cbpA; Curved DNA-binding protein K05516 cbpA; curved DNA-binding protein
D LMI_0895 Transcriptional regulator, MerR family K18997 cbpM; chaperone modulatory protein CbpM
D LMI_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D LMI_3133 putative DNA-binding protein hemimethylated K11940 hspQ; heat shock protein HspQ
D LMI_2401 putative DNA-binding ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D LMI_0298 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_1154 fis; Fis transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_1761 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_0008 hfq; Protein hfq K03666 hfq; host factor-I protein
D LMI_0092 putative transcriptional regulator, LysR family K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator
D LMI_0314 smc; Chromosome partition protein SMC [11 coiled coil domains] K03529 smc; chromosome segregation protein
D LMI_1780 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D LMI_1779 scpB; Segregation and condensation protein B homolog K06024 scpB; segregation and condensation protein B
D LMI_0324 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA
D LMI_2751 ftsB; Cell division protein ftsB homolog K05589 ftsB; cell division protein FtsB
D LMI_1159 ftsI; Peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LMI_1122 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LMI_1158 ftsL; Cell division transmembrane protein FtsL K03586 ftsL; cell division protein FtsL
D LMI_2669 conserved exported protein of unknown function K03591 ftsN; cell division protein FtsN
D LMI_0323 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D LMI_0319 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_2764 conserved membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D LMI_0325 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D LMI_0315 Cell division protein zipA K03528 zipA; cell division protein ZipA
D LMI_0044 zapA; Cell division protein ZapA K09888 zapA; cell division protein ZapA
D LMI_1590 conserved protein of unknown function K18778 zapD; cell division protein ZapD
D LMI_0270 conserved protein of unknown function K06916 zapE; cell division protein ZapE
D LMI_2803 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LMI_0272 HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2107 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2442 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2651 putative Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_1484 minC; putative septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D LMI_1908 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D LMI_1909 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D LMI_2073 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D LMI_2072 mreC; Rod shape determining protein MreC K03570 mreC; rod shape-determining protein MreC
D LMI_2071 mreD; Rod shape determining protein MreD K03571 mreD; rod shape-determining protein MreD
D LMI_1756 mrdB; Rod shape-determining protein rodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_0106 conserved protein of unknown function K03496 parA; chromosome partitioning protein
D LMI_0105 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMI_0345 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMI_3147 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LMI_1045 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LMI_0108 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LMI_0107 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LMI_1046 mrp; Protein mrp homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LMI_0136 engB; putative GTP-binding protein engB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:tmc03400]
D LMI_0570 ada; Methylated DNA-protein cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D LMI_2279 putative deoxyribodipyrimidine photolyase phrB K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LMI_1886 conserved protein of unknown function K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D LMI_1288 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D LMI_0115 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LMI_0513 conserved protein of unknown function K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LMI_1582 Mutator protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D LMI_0644 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LMI_1717 Methylated-DNA/protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LMI_2909 Deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D LMI_1803 Bacteriophage related DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LMI_1586 putative DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D LMI_0022 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D LMI_0304 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LMI_0390 exoA; Exodeoxyribonuclease K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D LMI_0391 Exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D LMI_0137 nfi; Endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7]
D LMI_1579 recJ; Single-stranded-DNA-specific exonuclease recJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LMI_2053 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LMI_3009 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D LMI_0533 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D LMI_0040 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D LMI_2481 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D LMI_0938 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LMI_0429 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LMI_0430 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LMI_0460 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LMI_2641 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D LMI_1222 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LMI_1056 mutS; DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D LMI_2802 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D LMI_1604 mutH; DNA mismatch repair protein mutH K03573 mutH; DNA mismatch repair protein MutH
D LMI_1224 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LMI_0865 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LMI_2045 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LMI_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LMI_0981 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LMI_1547 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LMI_1728 putative DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LMI_1743 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LMI_0587 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LMI_0463 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0741 ssb; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D LMI_2197 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0396 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LMI_1059 recA; Protein recA K03553 recA; recombination protein RecA
D LMI_1363 ruvA; Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D LMI_1467 ruvB; Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LMI_1362 ruvC; Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LMI_0148 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LMI_0868 radA; repair protein radA homolog K04485 radA; DNA repair protein RadA/Sms
D LMI_0003 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D LMI_2677 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LMI_1210 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D LMI_0585 recR; Recombination protein recR K06187 recR; recombination protein RecR
D LMI_0188 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LMI_1946 putative exonuclease RdgC K03554 rdgC; recombination associated protein RdgC
D LMI_1001 Endonuclease K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D LMI_0495 conserved protein of unknown function K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D LMI_1627 Probable DNA repair protein K10979 ku; DNA end-binding protein Ku
D LMI_2571 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D LMI_1812 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LMI_0006 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LMI_0337 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LMI_2624 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D LMI_0298 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_1154 fis; Fis transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_1761 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D LMI_2816 ihfA; Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D LMI_3050 ihfB; Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D LMI_2024 recQ; ATP-dependent DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D LMI_0471 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D LMI_0690 umuC; DNA-directed DNA polymerase K03502 umuC; DNA polymerase V
D LMI_0689 umuD; SOS (Error prone) mutagenesis protein UmuD (RumA) K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LMI_0097 RecX-family regulatory protein K03565 recX; regulatory protein
D LMI_1060 recX; Regulatory protein recX K03565 recX; regulatory protein
D LMI_0206 rep; ATP-dependent DNA helicase rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D LMI_1018 yoaA; putative ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D LMI_1066 DEAD/DEAH box helicase-like protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D LMI_1116 nrdA; Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LMI_1115 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tmc03029]
D LMI_2810 petB; Cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LMI_0251 infB; protein chain initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LMI_2821 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LMI_1894 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D LMI_0421 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D LMI_0434 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D LMI_0433 fusA; Elongation factor G K02355 fusA; elongation factor G
D LMI_1209 era; GTP-binding protein era homolog K03595 era; GTPase
D LMI_0408 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LMI_1549 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LMI_1602 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LMI_2670 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LMI_1924 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LMI_1925 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LMI_1923 gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LMI_3003 conserved protein of unknown function K23499 RMND1; required for meiotic nuclear division protein 1
D LMI_0463 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0741 ssb; Single-stranded DNA-binding protein 1 K03111 ssb; single-strand DNA-binding protein
D LMI_2197 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LMI_0841 conserved exported protein of unknown function K07277 SAM50; outer membrane protein insertion porin family
D LMI_2660 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D LMI_2661 grpE; Protein grpE K03687 GRPE; molecular chaperone GrpE
D LMI_2389 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LMI_2390 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D LMI_2659 dnaJ; Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D LMI_1151 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LMI_3063 ydhD; monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D LMI_1046 mrp; Protein mrp homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LMI_0915 cyoE; Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LMI_0102 Cytochrome c oxidase assembly protein ctaG K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LMI_0914 Cytochrome oxidase assembly family protein (fragment) K02259 COX15; heme a synthase [EC:1.17.99.9]
D LMI_3172 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LMI_0912 conserved protein of unknown function [Surfeit locus 1] K14998 SURF1; surfeit locus 1 family protein
D LMI_0916 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tmc02000]
D LMI_0971 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LMI_1413 Xenobiotic-transporting ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LMI_2636 uup-A; ABC transporter ATP-binding protein uup-1 K15738 uup; ABC transport system ATP-binding/permease protein
D LMI_2060 potD-B; Spermidine/putrescine-binding periplasmic protein 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D LMI_2059 potC; Spermidine/putrescine transport system permease protein potC K11070 potC; spermidine/putrescine transport system permease protein
D LMI_2058 potB; Spermidine/putrescine transport system permease protein potB K11071 potB; spermidine/putrescine transport system permease protein
D LMI_2057 potA; Spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D LMI_3031 ABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D LMI_3030 Glycine betaine transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D LMI_2990 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LMI_2989 ABC transporter, ATP binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LMI_2161 Glycerol-3-phosphate binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D LMI_1915 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D LMI_1914 ugpE; sn-glycerol-3-phosphate transport system permease protein ugpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D LMI_1913 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D LMI_1237 putative ABC transporter-binding protein HI_1085 K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LMI_2743 conserved exported protein of unknown function K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LMI_1236 yrbE; toluene transporter subunit: membrane component of ABC superfamily K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LMI_2741 conserved membrane protein of unknown function K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LMI_1235 yrbF; toluene transporter subunit: ATP-binding component of ABC superfamily K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LMI_2742 Uncharacterized ABC transporter ATP-binding protein HI_1087 K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LMI_2744 conserved exported protein of unknown function K18480 linN; cholesterol transport system auxiliary component
D LMI_1238 Signal peptide protein, toluene tolerance protein Ttg2D K07323 mlaC; phospholipid transport system substrate-binding protein
D LMI_1239 putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor) K07122 mlaB; phospholipid transport system transporter-binding protein
D LMI_0951 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D LMI_0952 metI; putative D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D LMI_0953 metN; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D LMI_0558 Arogenate dehydratase K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LMI_1249 membrane protein of unknown function [Ionotropic glutamate receptor] K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LMI_3025 Bacterial extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LMI_0557 glnP; putative glutamine transport system permease protein glnP K02029 ABC.PA.P; polar amino acid transport system permease protein
D LMI_2052 conserved exported protein of unknown function K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D LMI_2051 putative oligopeptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D LMI_2050 Peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D LMI_2470 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D LMI_0004 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D LMI_0005 rfbE; O-antigen export system ATP-binding protein rfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D LMI_0983 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D LMI_0984 putative YjgP/YjgQ family permease K11720 lptG; lipopolysaccharide export system permease protein
D LMI_1230 lptB; putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LMI_2173 lolC; Lipoprotein-releasing system transmembrane protein lolC K09808 lolC_E_F; lipoprotein-releasing system permease protein
D LMI_2172 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LMI_2032 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C
D LMI_2033 ccmB; Heme exporter protein B K02194 ccmB; heme exporter protein B
D LMI_2034 ccmA; Cytochrome c biogenesis ATP-binding export protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LMI_2764 conserved membrane protein of unknown function K09811 ftsX; cell division transport system permease protein
D LMI_0564 yadH; putative transporter subunit: membrane component of ABC superfamily K01992 ABC-2.P; ABC-2 type transport system permease protein
D LMI_0607 Export ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D LMI_0565 yadG; putative transporter subunit: ATP-binding component of ABC superfamily K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LMI_0606 ABC transporter related K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LMI_0056 ABC transporter, permease K02004 ABC.CD.P; putative ABC transport system permease protein
D LMI_0055 abcT; ABC transporter, ATP binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D LMI_0991 ycf; putative ATP-dependent transporter ycf16 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D LMI_0775 Major facilitator family transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LMI_2420 Transporter, major facilitator family K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LMI_2825 conserved membrane protein of unknown function K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LMI_3082 membrane protein of unknown function K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LMI_3145 membrane protein of unknown function K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LMI_2273 shiA; Shikimate transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D LMI_2102 ampG; Protein AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LMI_2796 membrane protein of unknown function K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LMI_2509 Multidrug resistance transporter, Bcr family K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D LMI_1197 cmr; Multidrug translocase mdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D LMI_0877 putative multidrug resistance protein, MFS superfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LMI_2038 emrB; Multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LMI_1287 putative Transporter, major facilitator family K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LMI_1386 MFS transporter family protein K06902 UMF1; MFS transporter, UMF1 family
D LMI_0126 ptsP; Phosphoenolpyruvate-protein phosphotransferase ptsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D LMI_0818 ptsH; Phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr
D LMI_0821 putative Nitrogen regulatory protein [Includes: Phosphotransferase enzyme IIA component] K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D LMI_1196 gstB; Glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LMI_2807 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D LMI_0158 conserved hypothetical protein; Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D LMI_0159 conserved protein of unknown function K07114 yfbK; Ca-activated chloride channel homolog
D LMI_0160 TPR repeat containing protein K07114 yfbK; Ca-activated chloride channel homolog
D LMI_1219 yccA; Inner membrane protein yccA K19416 yccA; modulator of FtsH protease
D LMI_1063 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D LMI_1603 Putative mechanosensitive ion channel MscS K05802 mscK; potassium-dependent mechanosensitive channel
D LMI_2272 Small conductance mechanosensitive ion channel family transporter K03442 mscS; small conductance mechanosensitive channel
D LMI_1008 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D LMI_1104 motA; Flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D LMI_1007 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D LMI_1105 motB; Flagellar motor protein K02557 motB; chemotaxis protein MotB
D LMI_3058 putative Sodium-type flagellar protein motY precursor K21218 motY; sodium-type flagellar protein MotY
D LMI_1469 tolQ; Protein tolQ K03562 tolQ; biopolymer transport protein TolQ
D LMI_1470 tolR; Protein tolR K03560 tolR; biopolymer transport protein TolR
D LMI_0120 corA; putative cobalt/magnesium uptake transporter K03284 corA; magnesium transporter
D LMI_0543 Magnesium/cobalt transport protein K03284 corA; magnesium transporter
D LMI_0018 crcB; Protein CrcB homolog K06199 crcB; fluoride exporter
D LMI_1763 conserved membrane protein of unknown function K08994 yneE; ion channel-forming bestrophin family protein
D LMI_0028 putative membrane protein with CBS regulatory domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LMI_0578 conserved membrane protein containing CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LMI_0522 conserved exported protein of unknown function K16079 omp31; outer membrane immunogenic protein
D LMI_1050 conserved exported protein of unknown function K06076 fadL; long-chain fatty acid transport protein
D LMI_1322 exported protein of unknown function [Toluene_X domain] K06076 fadL; long-chain fatty acid transport protein
D LMI_0798 cecC; Chemiosmotic efflux system C protein C K15725 czcC; outer membrane protein, heavy metal efflux system
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D LMI_0273 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_0879 RND efflux system NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_2036 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_3041 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_2086 conserved exported protein of unknown function K18904 nodT; outer membrane protein, multidrug efflux system
D LMI_0841 conserved exported protein of unknown function K07277 SAM50; outer membrane protein insertion porin family
D LMI_1495 PQQ (Pyrrolo quinoline) WD40-like repeat, enzyme repeat domain protein K17713 bamB; outer membrane protein assembly factor BamB
D LMI_1949 conserved exported protein of unknown function K05807 bamD; outer membrane protein assembly factor BamD
D LMI_0493 smpA; Small protein A K06186 bamE; outer membrane protein assembly factor BamE
D LMI_1055 Bacterial surface antigen K07278 tamA; translocation and assembly module TamA
D LMI_1054 Truncated periplasmic protein (modular protein) K09800 tamB; translocation and assembly module TamB
D LMI_1231 putative conserved hypothetical protein OstA family K09774 lptA; lipopolysaccharide export system protein LptA
D LMI_1232 conserved exported protein of unknown function K11719 lptC; lipopolysaccharide export system protein LptC
D LMI_2870 lptD; LPS-assembly protein lptD K04744 lptD; LPS-assembly protein
D LMI_1548 rlpB; Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D LMI_1788 ybeX; putative protein involved in divalent ion export K06189 corC; hemolysin (HlyC) family protein
D LMI_0510 Murein hydrolase exporter, LrgA family protein (fragment) K06518 cidA; holin-like protein
D LMI_0263 conserved membrane protein of unknown function K20265 gadC; glutamate:GABA antiporter
D LMI_1025 Amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D LMI_1872 Amino acid transporter K20265 gadC; glutamate:GABA antiporter
D LMI_2853 czcD; Cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D LMI_0978 conserved membrane protein of unknown function K07238 TC.ZIP; zinc transporter, ZIP family
D LMI_0796 Chemiosmotic efflux system protein A (CzcA) K15726 czcA; heavy metal efflux system protein
D LMI_0948 putative cation efflux system protein czcA K15726 czcA; heavy metal efflux system protein
D LMI_0271 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_2084 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D LMI_2106 Uncharacterized transporter HI_0895 K18138 acrB; multidrug efflux pump
D LMI_2443 Putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LMI_2652 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_3043 mdtB; Multidrug resistance protein mdtB K07788 mdtB; multidrug efflux pump
D LMI_3042 mdtC; Multidrug resistance protein mdtC K07789 mdtC; multidrug efflux pump
D LMI_1148 eamA; cysteine and O-acetyl-L-serine efflux system K15268 eamA; O-acetylserine/cysteine efflux transporter
D LMI_1285 eCM; Ca2/Na antiporter K07301 yrbG; cation:H+ antiporter
D LMI_2292 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D LMI_1198 yjcE; Uncharacterized Na(+)/H(+) exchanger yjcE K24163 nhaK; monovalent cation/hydrogen antiporter
D LMI_0261 kefC; Glutathione-regulated potassium-efflux system protein kefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D LMI_1896 putative monovalent cation:proton antiporter (CPA2 family) (fragment) K26735 KEA4_5_6; K+:H+ antiporter
D LMI_2078 Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D LMI_0484 trkH; Trk system potassium uptake protein trkH K03498 trkH; trk/ktr system potassium uptake protein
D LMI_0485 trkA; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D LMI_3004 yicO; xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D LMI_0398 tyrP; Tryptophan/tyrosine permease K03834 tyrP; tyrosine-specific transport protein
D LMI_0399 conserved membrane protein of unknown function K03834 tyrP; tyrosine-specific transport protein
D LMI_1861 sdaC; putative serine transporter K03837 sdaC; serine transporter
D LMI_0199 ydcO; putative benzoate transporter K05782 benE; benzoate membrane transport protein
D LMI_0876 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D LMI_1920 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D LMI_1566 putative chromate transporter K07240 chrA; chromate transporter
D LMI_2876 Chromate transport protein K07240 chrA; chromate transporter
D LMI_1427 High affinity nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D LMI_0384 yvdB; putative sulfate transporter yvdB K03321 TC.SULP; sulfate permease, SulP family
D LMI_0979 mviN; Virulence factor mviN K03980 murJ; putative peptidoglycan lipid II flippase
D LMI_0401 kup; putative potassium transport system protein kup 1 K03549 kup; KUP system potassium uptake protein
D LMI_0091 Transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D LMI_1408 LysE family transporter K05835 rhtC; threonine efflux protein
D LMI_2319 conserved membrane protein of unknown function [Fusaric acid resistance protein, conserved region] K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D LMI_0069 yhhQ; Inner membrane protein yhhQ K09125 yhhQ; queuosine precursor transporter
D LMI_2950 conserved membrane protein of unknown function K09125 yhhQ; queuosine precursor transporter
D LMI_0319 ftsW; Cell division protein ftsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D LMI_2406 membrane protein of unknown function K15383 K15383; MtN3 and saliva related transmembrane protein
D LMI_2745 pal; Peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D LMI_1471 conserved protein of unknown function K03646 tolA; colicin import membrane protein
D LMI_1472 tolB; Protein tolB K03641 tolB; TolB protein
D LMI_1326 conserved protein of unknown function K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D LMI_0878 emrA; Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D LMI_2037 emrA; Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D LMI_0797 ceaB; Chemiosmotic efflux system protein B-like protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D LMI_0949 putative cation transporter transmembrane protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D LMI_0272 HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2107 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2442 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2651 putative Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_3044 conserved protein of unknown function K07799 mdtA; membrane fusion protein, multidrug efflux system
D LMI_3163 ecfH; conserved hypothetical protein; putative periplasmic or secreted lipoprotein K28369 dolP; outer membrane lipoprotein DolP
D LMI_1187 Nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D LMI_0276 Ferrous iron transporter A K04758 feoA; ferrous iron transport protein A
D LMI_0277 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D LMI_2277 Tryptophan rich sensory protein TspO K05770 TSPO; translocator protein
D LMI_2344 conserved protein of unknown function K09857 pqiC; intermembrane transport lipoprotein PqiC
D LMI_2030 ccmF; Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:tmc02044]
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
D LMI_1839 lspD; Type II protein secretion LspD K02453 gspD; general secretion pathway protein D
D LMI_1840 gspE; general secretory pathway component, cryptic K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D LMI_1768 xcpS; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D LMI_1770 gspG; pseudopilin, cryptic, general secretion pathway K02456 gspG; general secretion pathway protein G
D LMI_1771 lspH; LspH K02457 gspH; general secretion pathway protein H
D LMI_1772 Ispl; Type II secretory pathway protein LspI K02458 gspI; general secretion pathway protein I
D LMI_1773 lspJ; Type II secretory pathway protein LspJ K02459 gspJ; general secretion pathway protein J
D LMI_1774 Ispk; Type II secretory pathway protein K02460 gspK; general secretion pathway protein K
D LMI_2338 General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D LMI_2339 lspM; Type II secretory pathway protein LspM K02462 gspM; general secretion pathway protein M
D LMI_1518 pilD; Type 4 prepilin-like proteins leader peptide-processing enzyme [Includes: Leader peptidase; N-methyltransferase] K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LMI_1029 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D LMI_1520 tapB; Type IV pilus assembly protein tapB K02652 pilB; type IV pilus assembly protein PilB
D LMI_1519 pilC; Type 4 fimbrial assembly protein pilC K02653 pilC; type IV pilus assembly protein PilC
D LMI_1207 putative Type IV pilin K02655 pilE; type IV pilus assembly protein PilE
D LMI_1491 pilF; Fimbrial biogenesis and twitching motility protein PilF K02656 pilF; type IV pilus assembly protein PilF
D LMI_1178 putative Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D LMI_1180 putative Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D LMI_1181 protein of unknown function K02664 pilO; type IV pilus assembly protein PilO
D LMI_1183 Fimbrial assembly protein pilQ (fragment) K02666 pilQ; type IV pilus assembly protein PilQ
D LMI_2316 pilT; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D LMI_2647 conserved membrane protein of unknown function K02221 yggT; YggT family protein
D LMI_2074 conserved exported protein of unknown function K02237 comEA; competence protein ComEA
D LMI_2009 DNA uptake/competence protein ComA K02238 comEC; competence protein ComEC
D LMI_1100 flhA; putative flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D LMI_2354 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D LMI_1099 flhB; flagellar export pore protein K02401 flhB; flagellar biosynthesis protein FlhB
D LMI_2353 putative flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D LMI_0353 conserved protein of unknown function K04061 flhB2; flagellar biosynthesis protein
D LMI_1134 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D LMI_2362 Truncated flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LMI_1136 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LMI_2364 putative Truncated flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LMI_1137 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LMI_2365 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LMI_1094 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LMI_2371 putative surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D LMI_1095 fliO; Flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ
D LMI_1096 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D LMI_2373 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D LMI_1097 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LMI_2351 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LMI_1098 Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D LMI_2352 putative flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR
D LMI_2975 lvhB; LvhB2 protein K03197 virB2; type IV secretion system protein VirB2
D LMI_2974 lvhB; Legionella vir-like protein LvhB3 K03198 virB3; type IV secretion system protein VirB3
D LMI_2973 lvhB; Legionella vir-like protein LvhB4 K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D LMI_2972 lvhB; Legionella vir-like protein LvhB5 K03200 virB5; type IV secretion system protein VirB5
D LMI_2969 lvhB; Legionella vir-like protein LvhB6 K03201 virB6; type IV secretion system protein VirB6
D LMI_2971 exported protein of unknown function K03202 virB7; type IV secretion system protein VirB7
D LMI_2968 lvhB; Legionella vir-like protein LvhB8 K03203 virB8; type IV secretion system protein VirB8
D LMI_2967 lvhB; Legionella vir-like protein LvhB9 K03204 virB9; type IV secretion system protein VirB9
D LMI_2966 lvhB; Legionella vir-like protein LvhB10 K03195 virB10; type IV secretion system protein VirB10
D LMI_2965 lvhB; Legionella vir-like protein LvhB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D LMI_2963 lvh1D; putative component of type IV secretion system K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D LMI_0749 Conjugative coupling factor TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D LMI_2778 dotA; Component of the Dot/Icm secretion system K12202 dotA; defect in organelle trafficking protein DotA
D LMI_2773 dotB; Component of the Dot/Icm secretions system. ATPase K12203 dotB; defect in organelle trafficking protein DotB [EC:7.2.4.8]
D LMI_2772 dotC; Component of the Dot/Icm secretion system. Lipoprotein K12204 dotC; defect in organelle trafficking protein DotC
D LMI_2771 dotD; Component of the Dot/Icm secretion system. Lipoprotein K12205 dotD; defect in organelle trafficking protein DotD
D LMI_2514 IcmB_DotO; Component of the Dot/Icm secretion system K12206 icmB; intracellular multiplication protein IcmB [EC:7.2.4.8]
D LMI_2517 icmC_dotE; Component of the Dot/Icm secretion system K12207 icmC; intracellular multiplication protein IcmC
D LMI_2516 icmD_DotP; Component of the Dot/Icm secretion system. Predicted innermembrane protein K12208 icmD; intracellular multiplication protein IcmD
D LMI_2519 icmE; IcmE (DotG) K12209 icmE; intracellular multiplication protein IcmE
D LMI_2513 icmF; IcmF protein K12210 icmF; intracellular multiplication protein IcmF
D LMI_2518 icmG_dotF; Component of the Dot/Icm secretion system K12211 icmG; intracellular multiplication protein IcmG
D LMI_2515 icmJ_dotN; Component of the Dot/Icm secretion system. Probable ATPase component K12212 icmJ; intracellular multiplication protein IcmJ
D LMI_2520 icmK_dotH; Component of the Dot/Icm secretion system K12213 icmK; intracellular multiplication protein IcmK
D LMI_2521 icmL_dotI; Component of the Dot/Icm secretion system. Inner membrane protein K12214 icmL; intracellular multiplication protein IcmL
D LMI_2522 icmM_dotJ; Component of the Dot/Icm secretion system. Predicted inner membrane protein K12215 icmM; intracellular multiplication protein IcmM
D LMI_2523 IcmN_DotK; Component of the Dot/Icm secretion system. Lipoprotein of the OmpA protein family K12216 icmN; intracellular multiplication protein IcmN
D LMI_2524 icmO_dotL; component of Dot/Icm secretion system. ATPase K12217 icmO; intracellular multiplication protein IcmO [EC:7.2.4.8]
D LMI_2525 icmP_dotM; component of Dot/Icm secretion system. ATPase component K12218 icmP; intracellular multiplication protein IcmP
D LMI_2526 IcmQ; component of Dot/Icm secretion system. Pore-forming molecule K12219 icmQ; intracellular multiplication protein IcmQ
D LMI_2529 icmS; component of Dot/Icm secretion system. Substrate recognition; presentation to translocon K12221 icmS; intracellular multiplication protein IcmS
D LMI_2530 icmT; component of the Dot/Icm secretion system K12222 icmT; intracellular multiplication protein IcmT
D LMI_2779 icmV; Component of the Dot/Icm secretion system K12223 icmV; intracellular multiplication protein IcmV
D LMI_2780 icmW; Component of the Dot/Icm secretion system K12224 icmW; intracellular multiplication protein IcmW
D LMI_2781 icmX; Component of the Dot/Icm secretion system K12225 icmX; intracellular multiplication protein IcmX
D LMI_2512 IcmH_DotU; component of the Dot/Icm secretion system K11892 impK; type VI secretion system protein ImpK
D LMI_1581 secA; Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LMI_2583 secB; Protein-export protein secB K03071 secB; preprotein translocase subunit SecB
D LMI_2328 secD; Protein-export membrane protein secD K03072 secD; preprotein translocase subunit SecD
D LMI_0422 secE; Preprotein translocase secE subunit K03073 secE; preprotein translocase subunit SecE
D LMI_2327 secF; Protein-export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D LMI_0232 secG; Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D LMI_0456 secY; Preprotein translocase subunit secY K03076 secY; preprotein translocase subunit SecY
D LMI_0575 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LMI_2767 conserved protein of unknown function K03110 ftsY; fused signal recognition particle receptor
D LMI_2329 conserved exported protein of unknown function K03210 yajC; preprotein translocase subunit YajC
D LMI_3172 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LMI_0076 tatA; Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D LMI_0075 tatB; putative TatB protein (Twin arginine translocation) K03117 tatB; sec-independent protein translocase protein TatB
D LMI_3101 tatC; Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tmc02042]
D LMI_0028 putative membrane protein with CBS regulatory domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LMI_0578 conserved membrane protein containing CBS domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tmc02022]
D LMI_2209 Histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D LMI_1790 Sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D LMI_1789 cpxR; Transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D LMI_1365 qseC; Histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D LMI_1366 qseB; Transcriptional regulatory protein qseB K07666 qseB; two-component system, OmpR family, response regulator QseB
D LMI_0502 putative sensory box sensor histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_1318 Two component system histidine kinase K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_1371 Putative sensory box sensor histidine kinase/response regulator (fragment) K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2409 Sensory box histidine kinase/response regulator (fragment) K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_2956 putative sensory histidine-kinase / response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D LMI_0536 yycF; Transcriptional regulatory protein yycF K02483 K02483; two-component system, OmpR family, response regulator
D LMI_0581 putative response regulator K02483 K02483; two-component system, OmpR family, response regulator
D LMI_2125 protein of unknown function K02483 K02483; two-component system, OmpR family, response regulator
D LMI_2412 gacS_letS; Sensory box histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D LMI_2482 gacA; Response regulator gacA K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D LMI_1417 Sensory box histidine kinase/response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LMI_1131 fleS; Histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D LMI_1132 conserved protein of unknown function K10943 flrC; two-component system, response regulator FlrC
C 02035 Bacterial motility proteins [BR:tmc02035]
D LMI_1417 Sensory box histidine kinase/response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D LMI_1136 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LMI_2364 putative Truncated flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D LMI_1137 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LMI_2365 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D LMI_1138 fliJ; Similar to flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D LMI_1095 fliO; Flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ
D LMI_1096 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D LMI_2373 fliP; Flagellar biosynthetic protein fliP K02419 fliP; flagellar biosynthesis protein FliP
D LMI_1097 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LMI_2351 fliQ; Flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D LMI_1098 Flagellar biosynthetic protein fliR K02421 fliR; flagellar biosynthesis protein FliR
D LMI_2352 putative flagellar biosynthesis pathway, component FliR K02421 fliR; flagellar biosynthesis protein FliR
D LMI_1100 flhA; putative flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D LMI_2354 flhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D LMI_1099 flhB; flagellar export pore protein K02401 flhB; flagellar biosynthesis protein FlhB
D LMI_2353 putative flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D LMI_1135 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D LMI_1093 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D LMI_1094 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D LMI_2371 putative surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D LMI_1134 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D LMI_2362 Truncated flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D LMI_1306 flgI; flagellar basal body P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D LMI_2358 flgI; Flagellar P-ring protein 1 K02394 flgI; flagellar P-ring protein FlgI
D LMI_1931 Flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D LMI_1305 flgH; Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D LMI_2357 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D LMI_1133 fliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D LMI_2361 fliE; Flagellar hook-basal body complex protein fliE 2 K02408 fliE; flagellar hook-basal body complex protein FliE
D LMI_1869 protein of unknown function K02414 fliK; flagellar hook-length control protein FliK
D LMI_1299 flgB; Flagellar basal-body rod protein flgB K02387 flgB; flagellar basal-body rod protein FlgB
D LMI_2359 putative flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D LMI_1300 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D LMI_2360 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D LMI_1301 flgD; Flagellar basal body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D LMI_2368 putative flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D LMI_1303 Flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D LMI_2355 putative flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D LMI_1304 flgG; Flagellar basal-body rod protein flgG K02392 flgG; flagellar basal-body rod protein FlgG
D LMI_2356 Flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D LMI_1307 Peptidoglycan hydrolase K02395 flgJ; peptidoglycan hydrolase FlgJ
D LMI_1302 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LMI_2369 putative Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D LMI_1308 flgK; Flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D LMI_1309 flgL; Flagellar hook associated protein type 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D LMI_1933 Putative flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D LMI_3058 putative Sodium-type flagellar protein motY precursor K21218 motY; sodium-type flagellar protein MotY
D LMI_1540 fla; Flagellin K02406 fliC; flagellin
D LMI_1538 conserved protein of unknown function K02407 fliD; flagellar hook-associated protein 2
D LMI_1537 fliS; B-type flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS
D LMI_1103 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D LMI_1008 motA; Motility protein A K02556 motA; chemotaxis protein MotA
D LMI_1104 motA; Flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D LMI_1007 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D LMI_1105 motB; Flagellar motor protein K02557 motB; chemotaxis protein MotB
D LMI_2043 fleQ; FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D LMI_1131 fleS; Histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D LMI_1132 conserved protein of unknown function K10943 flrC; two-component system, response regulator FlrC
D LMI_1932 conserved protein of unknown function K02398 flgM; negative regulator of flagellin synthesis FlgM
D LMI_1101 flhF; Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D LMI_1102 fleN; Flagellar biosynthesis MinD K04562 flhG; flagellar biosynthesis protein FlhG
D LMI_2316 pilT; Twitching mobility protein K02669 pilT; twitching motility protein PilT
D LMI_1029 pilE; Tfp pilus assembly protein, major type IV pilin class A K02650 pilA; type IV pilus assembly protein PilA
D LMI_1520 tapB; Type IV pilus assembly protein tapB K02652 pilB; type IV pilus assembly protein PilB
D LMI_1519 pilC; Type 4 fimbrial assembly protein pilC K02653 pilC; type IV pilus assembly protein PilC
D LMI_1518 pilD; Type 4 prepilin-like proteins leader peptide-processing enzyme [Includes: Leader peptidase; N-methyltransferase] K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LMI_1491 pilF; Fimbrial biogenesis and twitching motility protein PilF K02656 pilF; type IV pilus assembly protein PilF
D LMI_1183 Fimbrial assembly protein pilQ (fragment) K02666 pilQ; type IV pilus assembly protein PilQ
D LMI_1181 protein of unknown function K02664 pilO; type IV pilus assembly protein PilO
D LMI_1180 putative Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D LMI_1178 putative Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D LMI_1207 putative Type IV pilin K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tmc04812]
D LMI_2073 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D LMI_0325 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D LMI_0324 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA
D LMI_1484 minC; putative septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D LMI_1908 minD; Septum site-determining protein minD K03609 minD; septum site-determining protein MinD
D LMI_1909 minE; Cell division topological specificity factor K03608 minE; cell division topological specificity factor
D LMI_0106 conserved protein of unknown function K03496 parA; chromosome partitioning protein
D LMI_0105 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LMI_0345 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tmc04147]
D LMI_1762 htpG; Chaperone protein htpG K04079 HSP90A; molecular chaperone HtpG
D LMI_0813 aldob; Fructose-bisphosphate aldolase B K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D LMI_2752 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D LMI_2985 epd; D-erythrose 4-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D LMI_2986 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D LMI_2987 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D LMI_3062 tsaA; putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D LMI_2389 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LMI_2660 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D LMI_2118 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LMI_0172 Inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LMI_1901 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D LMI_0421 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D LMI_0434 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D LMI_0259 HINT; Histidine triad nucleotide-binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LMI_2393 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LMI_1483 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D LMI_0966 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1006 Acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1446 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_1621 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LMI_0908 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_2655 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D LMI_1819 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LMI_0554 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LMI_0555 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D LMI_1816 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D LMI_1767 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LMI_1053 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LMI_2166 lly; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LMI_2326 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D LMI_0801 purH; Bifunctional purine biosynthesis protein purH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase; IMP cyclohydrolase] K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D LMI_1824 lpdA; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LMI_1171 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D LMI_0231 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:tmc02048]
D LMI_2938 Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D LMI_2937 Type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LMI_2936 Putative type I restriction enzyme HindVIIP M protein (fragment) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D LMI_0396 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D LMI_0773 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D LMI_0927 conserved protein of unknown function K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D LMI_0928 Transcription regulator with HTH domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D LMI_0325 ftsZ; Cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D LMI_2073 mreB; Rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D LMI_3147 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LMI_1045 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LMI_2411 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LMI_1465 conserved protein of unknown function K09159 cptB; antitoxin CptB
D LMI_1151 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tmc01504]
D LMI_1255 streptomycin-6-phosphotransferase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D LMI_2003 Spectinomycin phosphotransferase K18844 aph; spectinomycin phosphotransferase
D LMI_1287 putative Transporter, major facilitator family K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D LMI_1197 cmr; Multidrug translocase mdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D LMI_2509 Multidrug resistance transporter, Bcr family K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D LMI_0118 cat; Chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D LMI_2313 Chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D LMI_2127 blaA; Beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D LMI_0349 vanX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_1375 D-alanyl-D-alanine dipeptidase (modular protein) K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D LMI_0272 HlyD-like secretion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2107 RND family efflux transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2442 acrA; RND efflux membrane fusion protein, acriflavin resistance protein E K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_2651 putative Efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D LMI_0271 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_2084 bepG; Efflux pump membrane transporter BepG K18138 acrB; multidrug efflux pump
D LMI_2106 Uncharacterized transporter HI_0895 K18138 acrB; multidrug efflux pump
D LMI_2443 Putative multidrug efflux transporter K18138 acrB; multidrug efflux pump
D LMI_2652 Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D LMI_0273 putative outer membrane efflux protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_0879 RND efflux system NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_2036 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_3041 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D LMI_0052 Outer membrane efflux protein K12340 tolC; outer membrane protein
D LMI_2457 conserved exported protein of unknown function K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified [BR:tmc04990]
D LMI_2545 protein of unknown function [ankyrin repeat] [Ras domain] K24023 RALGPS; Ras-specific guanine nucleotide-releasing factor RalGPS
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tmc03100]
D LMI_tRNA18 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LMI_tRNA32 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LMI_tRNA4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LMI_tRNA22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA24 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA37 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA38 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LMI_tRNA43 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LMI_tRNA28 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LMI_tRNA30 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D LMI_tRNA42 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D LMI_tRNA33 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LMI_tRNA34 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LMI_tRNA12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LMI_tRNA29 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LMI_tRNA7 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LMI_tRNA25 tRNA-His K14226 tRNA-His; tRNA His
D LMI_tRNA10 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LMI_tRNA1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA31 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LMI_tRNA11 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LMI_tRNA20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LMI_tRNA21 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LMI_tRNA13 tRNA-Met K14230 tRNA-Met; tRNA Met
D LMI_tRNA2 tRNA-Met K14230 tRNA-Met; tRNA Met
D LMI_tRNA41 tRNA-Met K14230 tRNA-Met; tRNA Met
D LMI_tRNA16 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LMI_tRNA23 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LMI_tRNA3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LMI_tRNA40 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LMI_tRNA14 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LMI_tRNA36 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LMI_tRNA39 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LMI_tRNA35 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LMI_tRNA5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LMI_tRNA8 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LMI_tRNA9 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LMI_tRNA6 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LMI_tRNA19 tRNA-Val K14237 tRNA-Val; tRNA Val
D LMI_tRNA27 tRNA-Val K14237 tRNA-Val; tRNA Val
D LMI_16s_rRNA_1 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_16s_rRNA_2 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_16s_rRNA_3 ribosomal RNA 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LMI_23s_rRNA_1 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_23s_rRNA_2 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_23s_rRNA_3 ribosomal RNA 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D LMI_5s_rRNA_1 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_5s_rRNA_2 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_5s_rRNA_3 ribosomal RNA 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D LMI_misc_RNA_14 RNaseP_bact_a K01978 rnpB; RNase P catalytic RNA component
D LMI_misc_RNA_11 SRP_bact K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LMI_2449 Short chain dehydrogenase/reductase family oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D LMI_1092 Oxidoreductase (L-gululonolactone oxidase) K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D LMI_1260 Estradiol 17-beta-dehydrogenase K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-]
D LMI_1044 yajO; aldoketo-oxidoreductase, NADP-binding K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D LMI_2503 fadH; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D LMI_1325 etfdh; Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D LMI_0072 msrAB; Peptide methionine sulfoxide reductase msrB/msrA [Includes: Peptide methionine sulfoxide reductase msrB; Peptide methionine sulfoxide reductase msrA] K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D LMI_0910 yfcG; Uncharacterized GST-like protein yfcG K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D LMI_1016 yqjG; S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D LMI_0174 ygaF; putative peroxiredoxin ygaF K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LMI_2507 ahpD; Alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D LMI_2508 ahpC; alkyl hydroperoxide reductase, peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D LMI_0012 Pirin-like protein CC_0481 K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D LMI_0387 Arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D LMI_2456 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D LMI_2264 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LMI_2445 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D LMI_2848 conserved protein of unknown function K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D LMI_1550 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LMI_2715 putative Acyl-CoA N-acyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D LMI_1120 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D LMI_0899 2(5-triphosphoribosyl)-3-dephosphocoenzyme A synthase CitG, modifier of citrate lyase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D LMI_1331 mdcB; 2(5'-triphosphoribosyl)-3'-dephosphocoenzyme A synthase CitG, modifier of citrate lyase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D LMI_0128 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LMI_1514 Putative phosphotransferase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D LMI_2426 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D LMI_1330 Nucleotidyltransferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D LMI_0170 conserved protein of unknown function K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D LMI_2232 conserved protein of unknown function [Macro domain-like] K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D LMI_0147 Thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LMI_1468 ybgC; acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D LMI_1783 Polymerase and histidinol phosphatase-like K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D LMI_2123 Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D LMI_1725 ycfH; putative metallodependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LMI_1441 Serine-type D-Ala-D-Ala carboxypeptidase (modular protein) K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D LMI_0290 def; Peptide deformylase 1 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LMI_0340 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LMI_0776 def; Peptide deformylase 2 K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LMI_0884 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LMI_1866 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LMI_2342 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LMI_2707 Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D LMI_1220 NIT; Nitrilase homolog 1 K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D LMI_0155 conserved protein of unknown function K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D LMI_2476 RBBP; Putative esterase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D LMI_1327 Acetyl coenzyme A carboxylase, carboxyltransferase subunit beta (fragment) K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D LMI_1328 Acetyl coenzyme A carboxylase,carboxyltransferase subunit beta (fragment) K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D LMI_1329 mdcC; Malonate decarboxylase gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D LMI_2805 yjeF; putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D LMI_1141 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D LMI_0114 Iron-sulfur cluster binding protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D LMI_1422 mgtA; Magnesium-transporting ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D LMI_1017 Ferredoxin 1 K05524 fdxA; ferredoxin
D LMI_0994 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D LMI_1152 putative iron-sulpher cluster proteins NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D LMI_1170 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D LMI_2025 protein with a Dodecin-like topology K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D LMI_1569 putative membrane protein K06203 cysZ; CysZ protein
D LMI_2550 conserved protein of unknown function K18802 DUG3; glutamine amidotransferase
D LMI_2645 yggS; putative enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D LMI_1807 conserved exported protein of unknown function K08992 lapA; lipopolysaccharide assembly protein A
D LMI_1806 conserved protein of unknown function K19804 lapB; lipopolysaccharide assembly protein B
D LMI_3119 conserved membrane protein of unknown function K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D LMI_2847 hemY; Protoporphyrinogen IX and coproporphyrinogen III oxidase HemY K02498 hemY; HemY protein
D LMI_0077 ubiB; putative ubiquinone biosynthesis protein ubiB K03688 ubiB; ubiquinone biosynthesis protein
D LMI_0078 conserved protein of unknown function K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D LMI_2542 conserved protein of unknown function K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
C 99999 Others
D LMI_0488 Carboxylesterase/phospholipase K06999 K06999; phospholipase/carboxylesterase
D LMI_1420 Acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LMI_0164 Cold shock-like protein CspG (modular protein) K03704 cspA; cold shock protein
D LMI_0937 cspH; stress protein, member of the CspA-family K03704 cspA; cold shock protein
D LMI_1293 capB; Cold shock protein CapB K03704 cspA; cold shock protein
D LMI_2219 cspA; Major cold shock protein CspA K03704 cspA; cold shock protein
D LMI_2539 glnB; Nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D LMI_0177 yhgF; transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D LMI_1993 Metallo-beta lactamase family K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D LMI_2068 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D LMI_2628 tig; Trigger factor K03545 tig; trigger factor
D LMI_0175 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D LMI_1433 hypC; putative hydrogenase expression/formation protein hypC K04653 hypC; hydrogenase expression/formation protein HypC
D LMI_1434 hypD; Hydrogenase expression/formation protein hypD K04654 hypD; hydrogenase expression/formation protein HypD
D LMI_1435 hypE; Hydrogenase expression/formation protein hypE K04655 hypE; hydrogenase expression/formation protein HypE
D LMI_1432 hypF; Carbamoyltransferase hypF K04656 hypF; hydrogenase maturation protein HypF
D LMI_2543 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D LMI_0566 putative 2OG-Fe(II) oxygenase superfamily protein K07394 K07394; SM-20-related protein
D LMI_3054 nfeD; membrane bound peptidase; NefD homolog K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D LMI_0642 conserved protein of unknown function K03630 radC; DNA repair protein RadC
D LMI_2056 rmuC; RmuC family protein K09760 rmuC; DNA recombination protein RmuC
D LMI_3165 conserved protein of unknown function K07460 yraN; putative endonuclease
D LMI_1279 putative excinuclease ABC, C subunit, N-terminal K07461 K07461; putative endonuclease
D LMI_0339 smf; Protein smf K04096 smf; DNA processing protein
D LMI_1124 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D LMI_2597 conserved protein of unknown function K06919 K06919; putative DNA primase/helicase
D LMI_2598 TOPRIM domain-containing protein K06919 K06919; putative DNA primase/helicase
D LMI_1821 conserved protein of unknown function K07501 K07501; 3'-5' exonuclease
D LMI_0920 Transposase IS3/IS911 K07483 K07483; transposase
D LMI_0038 transposase K07485 K07485; transposase
D LMI_0361 transposase K07485 K07485; transposase
D LMI_0737 transposase K07485 K07485; transposase
D LMI_0783 transposase K07485 K07485; transposase
D LMI_2005 transposase K07485 K07485; transposase
D LMI_2736 transposase K07485 K07485; transposase
D LMI_0331 transposase K07493 K07493; putative transposase
D LMI_1107 transposase K07493 K07493; putative transposase
D LMI_1393 transposase K07493 K07493; putative transposase
D LMI_1764 transposase K07493 K07493; putative transposase
D LMI_2202 transposase K07493 K07493; putative transposase
D LMI_2939 transposase K07493 K07493; putative transposase
D LMI_0922 Integrase, catalytic core K07497 K07497; putative transposase
D LMI_2944 Phage integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D LMI_0586 UPF0133 family protein K09747 ebfC; nucleoid-associated protein EbfC
D LMI_1971 protein of unknown function K09747 ebfC; nucleoid-associated protein EbfC
D LMI_1973 protein of unknown function K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LMI_1252 Amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D LMI_0025 yhdG; Uncharacterized amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LMI_0221 dtpB; Dipeptide and tripeptide permease B K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LMI_1748 Proton/peptide symporter, POT family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LMI_2137 Di/tripeptide transporter homolog IraB K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LMI_0027 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LMI_2757 putative phosphate permease HI_1604 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D LMI_0194 Putative branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D LMI_1367 ispZ; putative intracellular septation protein K06190 ispZ; intracellular septation protein
D LMI_0403 spmA; Spore maturation protein A K06373 spmA; spore maturation protein A
D LMI_0404 spmB; Spore maturation protein B K06374 spmB; spore maturation protein B
D LMI_0213 putative Stage V sporulation protein R K06415 spoVR; stage V sporulation protein R
D LMI_0836 Membrane-bound metallopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D LMI_1828 conserved membrane protein of unknown function K03807 ampE; AmpE protein
D LMI_0146 proQm; Activator of ProP osmoprotectant transporter K03607 proQ; ProP effector
D LMI_1884 ProQ-like, activator of ProP osmoprotectant transporter K03607 proQ; ProP effector
D LMI_1188 UspA; Universal stress protein A K06149 uspA; universal stress protein A
D LMI_0192 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D LMI_1786 ybeZ; putative enzyme with nucleoside triphosphate hydrolase domain K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D LMI_0173 conserved protein of unknown function K07175 phoH2; PhoH-like ATPase
D LMI_0215 conserved protein of unknown function K07180 prkA; serine protein kinase
D LMI_2883 yajQ; putative nucleotide binding protein (UPF0234 protein) K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D LMI_1123 lolA; Outer-membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D LMI_0300 Outer membrane lipoprotein LolB (modular protein) K02494 lolB; outer membrane lipoprotein LolB
D LMI_2562 conserved exported protein of unknown function K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LMI_0842 Outer membrane protein OmpH K06142 hlpA; outer membrane protein
D LMI_1357 nlpD; Novel lipoprotein homolog NlpD K06194 nlpD; lipoprotein NlpD
D LMI_1289 putative asmA protein K07289 asmA; AsmA protein
D LMI_1085 conserved protein of unknown function [coiled-coil domains] K02022 ABC.MR.TX; HlyD family secretion protein
D LMI_2250 protein of unknown function [Coiled-coil domain] K02022 ABC.MR.TX; HlyD family secretion protein
D LMI_0605 Periplasmic component of efflux system K01993 ABC-2.TX; HlyD family secretion protein
D LMI_0054 efflux transporter K02005 ABC.CD.TX; HlyD family secretion protein
D LMI_2676 Putative permease K11744 tqsA; AI-2 transport protein TqsA
D LMI_2031 ccmE; Cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D LMI_2027 Conserved Hypothetical Protein; Tetratricopeptide repeat K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D LMI_2028 ccmH; C-type cytochrome biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D LMI_1492 putative DNA-binding protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LMI_1544 Colicin V K03558 cvpA; membrane protein required for colicin V production
D LMI_0531 osmY; Osmotically inducible protein K04065 osmY; hyperosmotically inducible periplasmic protein
D LMI_1248 csaA; Chaperonin CsaA K06878 K06878; tRNA-binding protein
D LMI_2851 Group 1 truncated hemoglobin K06886 glbN; hemoglobin
D LMI_1383 MmpL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D LMI_2240 MmpL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D LMI_0219 Esterase of the alpha-beta hydrolase family K07001 K07001; NTE family protein
D LMI_1348 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LMI_1384 putative Lysophospholipase K07001 K07001; NTE family protein
D LMI_1750 Phospholipase, patatin family K07001 K07001; NTE family protein
D LMI_2269 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LMI_2403 Lysophospholipase K07001 K07001; NTE family protein
D LMI_2686 putative patatin-like phospholipase K07001 K07001; NTE family protein
D LMI_2731 conserved protein of unknown function K07001 K07001; NTE family protein
D LMI_3168 conserved protein of unknown function K07001 K07001; NTE family protein
D LMI_1740 yadR; putative chaperone involved in Fe-S cluster assembly and activation; hesB-like K15724 erpA; iron-sulfur cluster insertion protein
D LMI_0990 sufB; component of SufBCD complex K09014 sufB; Fe-S cluster assembly protein SufB
D LMI_0992 ABC transporter, permease component K09015 sufD; Fe-S cluster assembly protein SufD
D LMI_0862 conserved membrane protein of unknown function K07038 K07038; inner membrane protein
D LMI_0385 Ribonuclease BN K07058 K07058; membrane protein
D LMI_1191 Phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D LMI_0351 conserved protein of unknown function K07146 K07146; UPF0176 protein
D LMI_0032 Glyoxalase/bleomycin resistance protein/dioxygenase K04750 phnB; PhnB protein
D LMI_0540 LemA protein K03744 lemA; LemA protein
D LMI_1543 Sporulation domain protein K03749 dedD; DedD protein
D LMI_1186 conserved protein of unknown function K03112 damX; DamX protein
D LMI_1126 dedA; transmembrane protein DedA family protein K03975 dedA; membrane-associated protein
D LMI_2706 protein of unknown function K08995 K08995; putative membrane protein
D LMI_2349 putative SEC-C motif domain protein K09858 K09858; SEC-C motif domain protein
D LMI_0062 phnA; alkylphosphonate uptake protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D LMI_2675 Conserved protein of unknown function [thioredoxin domain] K06888 K06888; uncharacterized protein
D LMI_3047 conserved protein of unknown function K06889 K06889; uncharacterized protein
D LMI_0888 CoA-binding protein K06929 K06929; uncharacterized protein
D LMI_2218 Predicted acyl esterases K06978 K06978; uncharacterized protein
D LMI_0918 Succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D LMI_0468 Glyoxalase/Bleomycin resistance family protein K06991 K06991; uncharacterized protein
D LMI_2421 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein
D LMI_2995 Glyoxylase K06996 K06996; uncharacterized protein
D LMI_1618 putative Phosphoglycerol transferase MdoB and related protein-like protein, alkaline phosphatase superfamily K07014 K07014; uncharacterized protein
D LMI_2396 putative Alkaline phosphatase K07014 K07014; uncharacterized protein
D LMI_2397 putative alkaline-phosphatase K07014 K07014; uncharacterized protein
D LMI_0269 conserved protein of unknown function K07018 K07018; uncharacterized protein
D LMI_2664 yheT; putative esterase yheT K07019 K07019; uncharacterized protein
D LMI_1000 conserved protein of unknown function K07071 K07071; uncharacterized protein
D LMI_0127 conserved membrane protein of unknown function K07090 K07090; uncharacterized protein
D LMI_2463 conserved membrane protein of unknown function K07090 K07090; uncharacterized protein
D LMI_1382 conserved protein of unknown function [Metallophosphoesterase] K07098 K07098; uncharacterized protein
D LMI_2259 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D LMI_2260 conserved membrane protein of unknown function K07112 K07112; uncharacterized protein
D LMI_3166 Lipoprotein K07121 K07121; uncharacterized protein
D LMI_1065 Beta-lactamase [Sel-1 domain like] K07126 K07126; uncharacterized protein
D LMI_1775 Beta-lactamase [sel1-domai][TPR domain] K07126 K07126; uncharacterized protein
D LMI_0787 conserved protein of unknown function K09117 K09117; uncharacterized protein
D LMI_2711 conserved protein of unknown function K09122 K09122; uncharacterized protein
D LMI_1200 conserved protein of unknown function K09131 K09131; uncharacterized protein
D LMI_1529 conserved protein of unknown function K09158 K09158; uncharacterized protein
D LMI_0167 conserved protein of unknown function K09768 K09768; uncharacterized protein
D LMI_0214 conserved protein of unknown function K09786 K09786; uncharacterized protein
D LMI_1020 conserved protein of unknown function K09791 K09791; uncharacterized protein
D LMI_0490 rnfH; Protein rnfH K09801 K09801; uncharacterized protein
D LMI_2283 conserved protein of unknown function K09822 K09822; uncharacterized protein
D LMI_2244 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D LMI_0045 conserved protein of unknown function K09895 K09895; uncharacterized protein
D LMI_0906 conserved protein of unknown function K09930 K09930; uncharacterized protein
D LMI_0831 conserved protein of unknown function K09937 K09937; uncharacterized protein
D LMI_1961 conserved protein of unknown function K09941 K09941; uncharacterized protein
D LMI_2756 conserved protein of unknown function K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: July 16, 2025