+E Transcription factors KO #

  Transcription Factors - Legionella micdadei

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D LMI_1717 Methylated-DNA/protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D LMI_0975 oxyR; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D LMI_0092 putative transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor C DeoR family C LacI family C GntR family C TetR/AcrR family C Lrp/AsnC family D LMI_2176 asnC; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA C LuxR family C MarR family C MerR family C Fur family D LMI_0494 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LMI_0376 putative Ferric uptake regulator, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family C CRP/FNR family D LMI_0084 Putative transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D LMI_2850 nsrR; HTH-type transcriptional regulator nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family C XRE family D LMI_0198 ydcN; putative DNA-binding transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D LMI_2114 Biotin synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D LMI_0298 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LMI_1154 fis; Fis transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LMI_1761 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LMI_0928 Transcription regulator with HTH domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LMI_2461 Transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D LMI_2043 fleQ; FleQ protein K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D LMI_1630 conserved protein of unknown function [YheO domain] K21829 dauR; D-arginine utilization repressor D LMI_2310 yozG; Uncharacterized HTH-type transcriptional regulator yozG K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D LMI_1881 bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D LMI_1027 bolA; Protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D LMI_0345 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LMI_0105 parB; putative chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LMI_0559 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D LMI_0190 Thiaminase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D LMI_1697 Phage transcriptional regulator, AlpA [Prophage CP4-57 regulatory domain] K07733 alpA; prophage regulatory protein D LMI_0780 conserved protein of unknown function K07733 alpA; prophage regulatory protein D LMI_2554 conserved protein of unknown function K07735 algH; putative transcriptional regulator D LMI_2492 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D LMI_2439 nrdR; transcriptional repressor of nrd genes K07738 nrdR; transcriptional repressor NrdR D LMI_1687 protein of unknown function [Lambda repressor-like, DNA-binding] K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D LMI_1156 mraZ; Protein mraZ. Putative protein involved in cell division or replication K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0