+D GENES KO #

  KEGG Orthology (KO) - Thiomicrospira microaerophila

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tmh00010] D JX580_07815 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JX580_09140 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JX580_02005 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JX580_08710 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JX580_00685 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JX580_02890 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JX580_00670 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JX580_00675 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JX580_01085 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JX580_05835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JX580_00680 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_04420 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_01935 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JX580_07080 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JX580_07075 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_00350 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] C 00020 Citrate cycle (TCA cycle) [PATH:tmh00020] D JX580_01255 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D JX580_06890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JX580_10640 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_06780 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JX580_06785 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JX580_06855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JX580_06860 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JX580_06845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JX580_06850 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JX580_04820 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JX580_08570 FAD-dependent oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D JX580_07080 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JX580_07075 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:tmh00030] D JX580_09140 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JX580_05535 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JX580_05530 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D JX580_05540 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JX580_10265 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JX580_00665 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JX580_01960 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_02395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JX580_02560 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D JX580_00685 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JX580_08710 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JX580_02005 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:tmh00040] D JX580_05795 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_09135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_09145 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JX580_10265 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JX580_06430 FGGY-family carbohydrate kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:tmh00051] D JX580_07100 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_00320 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D JX580_02005 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JX580_08710 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JX580_00685 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JX580_02890 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:tmh00052] D JX580_09145 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_07815 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JX580_02005 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:tmh00053] D JX580_05795 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_09135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_05785 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:tmh00500] D JX580_09145 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JX580_07810 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D JX580_07790 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D JX580_07795 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D JX580_04400 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D JX580_07785 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D JX580_07800 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_07815 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JX580_09140 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JX580_07100 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tmh00520] D JX580_06755 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D JX580_07100 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D JX580_00090 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JX580_05800 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JX580_02885 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D JX580_10915 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JX580_03130 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D JX580_04240 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D JX580_07835 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D JX580_07830 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D JX580_03305 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JX580_06750 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JX580_02055 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D JX580_02090 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D JX580_02075 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] D JX580_07815 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_09145 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JX580_05795 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_09135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_05785 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D JX580_09140 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JX580_07810 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tmh00620] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JX580_07080 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JX580_07075 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_00680 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_04420 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_05855 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JX580_05490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JX580_05495 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JX580_02840 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JX580_00980 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D JX580_03440 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D JX580_05335 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D JX580_11435 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D JX580_08570 FAD-dependent oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D JX580_04820 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JX580_08720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JX580_01935 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JX580_09125 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tmh00630] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JX580_01255 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D JX580_06890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JX580_02435 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JX580_10260 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D JX580_00540 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D JX580_00545 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D JX580_07620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JX580_07265 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08930 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D JX580_00335 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JX580_10610 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:tmh00640] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_05855 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JX580_05490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JX580_05495 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JX580_02840 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JX580_06785 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JX580_06780 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JX580_01255 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D JX580_06890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:tmh00650] D JX580_06855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JX580_06860 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JX580_06845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JX580_06850 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JX580_08920 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JX580_02690 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D JX580_07545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09030 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_11640 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tmh00660] D JX580_07545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09030 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_11640 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JX580_06785 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JX580_06780 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JX580_02790 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D JX580_02795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D JX580_02800 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tmh00562] D JX580_03355 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JX580_09110 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JX580_02890 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tmh00190] D JX580_02905 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D JX580_02910 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D JX580_02915 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D JX580_02920 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D JX580_02925 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D JX580_02930 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D JX580_02935 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D JX580_02940 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D JX580_02945 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D JX580_02950 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D JX580_02955 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D JX580_02960 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D JX580_02965 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D JX580_02970 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D JX580_06855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JX580_06860 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JX580_06845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JX580_06850 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JX580_03330 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D JX580_03335 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JX580_03340 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D JX580_10415 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D JX580_10410 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D JX580_10400 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D JX580_10935 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JX580_10925 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JX580_10930 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JX580_10940 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JX580_10920 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JX580_10955 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JX580_10945 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JX580_10950 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JX580_08715 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D JX580_09630 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JX580_08490 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:tmh00710] D JX580_00540 form I ribulose bisphosphate carboxylase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D JX580_00545 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D JX580_00675 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JX580_00670 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JX580_00685 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JX580_08710 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JX580_00665 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D JX580_01960 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D JX580_11690 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D JX580_02890 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D JX580_10265 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D JX580_08720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] C 00720 Other carbon fixation pathways [PATH:tmh00720] D JX580_01935 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JX580_08720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JX580_04820 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D JX580_06855 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D JX580_06860 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D JX580_06845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D JX580_06850 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D JX580_06780 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D JX580_06785 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D JX580_10640 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JX580_06890 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D JX580_05855 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JX580_05490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JX580_05495 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JX580_02840 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JX580_05610 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JX580_01790 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:tmh00680] D JX580_07265 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JX580_05835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JX580_08720 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D JX580_00685 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D JX580_08710 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JX580_02005 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JX580_01935 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D JX580_01085 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JX580_04255 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JX580_03660 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:tmh00910] D JX580_07325 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D JX580_11125 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D JX580_07320 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D JX580_11130 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D JX580_07315 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D JX580_11135 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D JX580_07295 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D JX580_07310 NAD(P)/FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D JX580_07305 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D JX580_07300 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D JX580_01080 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D JX580_07620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JX580_01075 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JX580_01070 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JX580_05470 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D JX580_11140 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D JX580_03425 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tmh00920] D JX580_05215 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JX580_05210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JX580_05225 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D JX580_05230 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D JX580_07345 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D JX580_09175 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D JX580_09160 c-type cytochrome K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D JX580_09165 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D JX580_09170 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D JX580_04750 5'-nucleotidase C-terminal domain-containing protein K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D JX580_10665 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC D JX580_10660 hypothetical protein K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D JX580_01065 NADP oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D JX580_06810 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D JX580_10580 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D JX580_00070 FCSD flavin-binding domain-containing protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D JX580_00080 FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D JX580_03490 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D JX580_07905 FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D JX580_00065 cytochrome c4 K17230 fccA; cytochrome subunit of sulfide dehydrogenase D JX580_00075 c-type cytochrome K17230 fccA; cytochrome subunit of sulfide dehydrogenase D JX580_07900 cytochrome C K17230 fccA; cytochrome subunit of sulfide dehydrogenase D JX580_03495 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase D JX580_09280 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JX580_10740 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JX580_09100 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JX580_08610 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D JX580_02860 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tmh00061] D JX580_05855 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D JX580_05490 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D JX580_05495 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D JX580_02840 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D JX580_02475 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D JX580_02465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JX580_02460 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JX580_01240 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JX580_02480 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JX580_02470 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JX580_01235 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D JX580_06650 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JX580_04115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tmh00071] D JX580_11720 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D JX580_10620 oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D JX580_05455 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00074 Mycolic acid biosynthesis [PATH:tmh00074] D JX580_04910 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D JX580_02475 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D JX580_02465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tmh00561] D JX580_00335 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JX580_02455 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JX580_08185 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JX580_03160 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JX580_04430 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] C 00564 Glycerophospholipid metabolism [PATH:tmh00564] D JX580_01105 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D JX580_08185 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JX580_03160 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D JX580_11720 AMP-binding protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D JX580_06675 CDP-archaeol synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D JX580_09130 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D JX580_05270 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D JX580_06585 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D JX580_05280 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids D JX580_03015 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tmh00230] D JX580_05890 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D JX580_07350 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_02395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D JX580_02855 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JX580_05520 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D JX580_03785 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JX580_10770 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D JX580_04745 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D JX580_03790 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D JX580_08075 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D JX580_08070 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D JX580_10275 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D JX580_06895 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JX580_05515 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JX580_11845 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JX580_04385 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D JX580_06290 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JX580_07355 yrfG; GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D JX580_03445 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D JX580_07585 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D JX580_07960 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JX580_09085 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JX580_00155 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D JX580_00615 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D JX580_07955 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JX580_10525 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D JX580_03210 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JX580_03205 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JX580_07920 deoxyguanosinetriphosphate triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1] D JX580_00220 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JX580_09635 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D JX580_05600 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D JX580_01895 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D JX580_05575 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D JX580_08225 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JX580_00760 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D JX580_10695 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JX580_07860 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D JX580_05225 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D JX580_05215 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JX580_05210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:tmh00240] D JX580_04845 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JX580_04840 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JX580_08470 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JX580_08475 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JX580_08915 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D JX580_01115 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D JX580_01055 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D JX580_04300 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D JX580_06690 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D JX580_09085 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JX580_03845 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D JX580_05845 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D JX580_04280 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D JX580_04385 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D JX580_06290 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JX580_03445 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D JX580_08465 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D JX580_00760 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D JX580_03775 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D JX580_03210 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JX580_03205 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D JX580_03585 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D JX580_09940 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JX580_01610 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tmh00250] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_04865 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D JX580_06395 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D JX580_09205 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D JX580_05275 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JX580_11740 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JX580_08225 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D JX580_06895 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D JX580_08470 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D JX580_08920 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JX580_01075 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JX580_01070 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D JX580_01080 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D JX580_07620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JX580_04845 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JX580_04840 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JX580_00090 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JX580_05800 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JX580_02855 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tmh00260] D JX580_07760 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JX580_02815 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JX580_06260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JX580_10655 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D JX580_06245 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D JX580_07265 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JX580_00335 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D JX580_01085 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D JX580_04255 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JX580_03660 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08930 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D JX580_09130 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D JX580_02990 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JX580_02835 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JX580_02830 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JX580_09605 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JX580_06310 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D JX580_06315 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D JX580_06305 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:tmh00270] D JX580_09100 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D JX580_10715 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JX580_00315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JX580_09670 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D JX580_01795 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JX580_10230 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D JX580_07365 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D JX580_10225 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JX580_10765 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D JX580_07585 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D JX580_10760 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D JX580_07760 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JX580_02815 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JX580_06260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JX580_08610 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D JX580_02860 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D JX580_01975 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JX580_01780 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D JX580_08680 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_09280 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JX580_10740 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JX580_05945 pyridoxal-phosphate dependent enzyme K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D JX580_05585 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D JX580_04255 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:tmh00280] D JX580_01975 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_02690 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tmh00290] D JX580_02990 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D JX580_02790 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D JX580_02795 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D JX580_02800 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D JX580_07545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09030 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_11640 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JX580_09040 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D JX580_09185 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D JX580_01975 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JX580_09125 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tmh00300] D JX580_06260 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D JX580_07760 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JX580_02815 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JX580_04735 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JX580_06440 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D JX580_06720 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D JX580_01970 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JX580_06730 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JX580_02565 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JX580_09975 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D JX580_01705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JX580_01710 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tmh00310] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08920 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D JX580_08815 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:tmh00220] D JX580_01965 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D JX580_05275 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JX580_11740 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JX580_07620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JX580_04845 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D JX580_04840 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D JX580_01080 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_09190 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D JX580_01505 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D JX580_01040 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D JX580_01245 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D JX580_01970 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:tmh00330] D JX580_01015 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D JX580_07365 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D JX580_10225 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D JX580_10230 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D JX580_08600 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D JX580_09340 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JX580_04660 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D JX580_00275 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_08815 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:tmh00340] D JX580_03310 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D JX580_08230 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D JX580_10440 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D JX580_00780 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D JX580_10430 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D JX580_10425 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D JX580_10435 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D JX580_10420 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D JX580_03320 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_04265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_03315 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:tmh00350] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_03320 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_04265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_08920 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:tmh00360] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_03320 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_04265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_08815 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JX580_09465 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D JX580_10620 oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:tmh00380] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_09465 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tmh00400] D JX580_07220 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JX580_10515 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D JX580_05485 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D JX580_10675 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D JX580_10520 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D JX580_04275 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D JX580_03430 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D JX580_10255 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JX580_10250 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D JX580_10245 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D JX580_02825 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D JX580_10240 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D JX580_02835 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D JX580_02830 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JX580_09605 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D JX580_04260 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_03320 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_04265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tmh00410] D JX580_08725 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D JX580_08740 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism D JX580_00120 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tmh00450] D JX580_10715 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JX580_00315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JX580_09670 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D JX580_01425 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D JX580_04925 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D JX580_05215 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JX580_05210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JX580_10710 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D JX580_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tmh00460] D JX580_00120 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JX580_06395 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D JX580_07265 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tmh00470] D JX580_05895 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JX580_08815 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JX580_01475 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JX580_01720 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JX580_05945 pyridoxal-phosphate dependent enzyme K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D JX580_02565 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D JX580_09975 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tmh00480] D JX580_00120 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JX580_06140 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D JX580_06150 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D JX580_01780 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D JX580_08680 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D JX580_02205 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JX580_08435 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JX580_07040 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JX580_10545 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D JX580_10640 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D JX580_05540 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D JX580_05535 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JX580_10550 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D JX580_07365 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D JX580_10225 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tmh00540] D JX580_06645 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D JX580_01490 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D JX580_06655 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D JX580_05300 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D JX580_06640 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D JX580_06835 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D JX580_07820 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D JX580_05840 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D JX580_03250 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D JX580_06825 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D JX580_00485 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JX580_03400 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JX580_10810 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JX580_03020 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D JX580_00490 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D JX580_00495 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D JX580_03155 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D JX580_00505 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:tmh00542] D JX580_05015 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tmh00541] D JX580_09145 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D JX580_05795 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_09135 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D JX580_05785 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D JX580_00380 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05065 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05080 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05380 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05070 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JX580_05780 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JX580_05075 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D JX580_05775 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D JX580_10915 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D JX580_02055 pseB; UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D JX580_02090 pseI; pseudaminic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D JX580_02075 pseF; pseudaminic acid cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81] C 00550 Peptidoglycan biosynthesis [PATH:tmh00550] D JX580_03305 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JX580_06750 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JX580_01470 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JX580_01720 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JX580_01705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JX580_01475 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JX580_01710 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JX580_06680 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JX580_08200 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JX580_01715 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JX580_01730 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JX580_10690 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JX580_08800 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JX580_01700 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JX580_08810 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:tmh00552] D JX580_08200 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JX580_05015 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium D JX580_05015 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00543 Exopolysaccharide biosynthesis [PATH:tmh00543] D JX580_00385 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D JX580_05015 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D JX580_09100 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tmh00730] D JX580_10870 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D JX580_09900 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D JX580_08705 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D JX580_10875 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19] D JX580_10885 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D JX580_01945 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D JX580_07230 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D JX580_08875 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JX580_10695 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tmh00740] D JX580_07245 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JX580_07255 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JX580_07240 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D JX580_07250 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D JX580_07490 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D JX580_05890 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] C 00750 Vitamin B6 metabolism [PATH:tmh00750] D JX580_02375 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D JX580_06505 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D JX580_04255 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D JX580_07850 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D JX580_04905 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D JX580_06245 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:tmh00760] D JX580_04865 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D JX580_07180 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D JX580_07015 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D JX580_04385 5'-nucleotidase C-terminal domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D JX580_06290 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D JX580_07570 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D JX580_06775 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D JX580_07780 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D JX580_07980 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D JX580_08920 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:tmh00770] D JX580_07545 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09030 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_11640 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D JX580_09035 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D JX580_09040 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D JX580_09185 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D JX580_08745 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D JX580_08740 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D JX580_01225 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D JX580_09955 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D JX580_01525 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D JX580_01515 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D JX580_04910 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D JX580_01975 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JX580_08725 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:tmh00780] D JX580_10485 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D JX580_01240 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JX580_02480 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JX580_02470 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JX580_06650 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JX580_04115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JX580_10490 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D JX580_10510 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D JX580_10220 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D JX580_10280 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D JX580_00345 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D JX580_11790 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tmh00785] D JX580_08825 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D JX580_08830 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_07080 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D JX580_07075 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D JX580_08930 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tmh00790] D JX580_08580 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D JX580_08190 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D JX580_08750 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D JX580_02880 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D JX580_01615 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JX580_02845 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D JX580_07245 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D JX580_02485 aminodeoxychorismate synthase component I K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123] D JX580_02490 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D JX580_01550 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D JX580_07205 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JX580_09015 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D JX580_02785 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D JX580_07125 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D JX580_11010 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D JX580_01585 GAK system ATP-grasp enzyme K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33] D JX580_00095 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D JX580_00115 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D JX580_00105 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D JX580_03415 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D JX580_00110 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D JX580_04810 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D JX580_04805 NTP transferase domain-containing protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tmh00670] D JX580_01615 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D JX580_01550 folM; dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D JX580_05610 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D JX580_07265 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D JX580_03785 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D JX580_05515 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JX580_10345 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JX580_00315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D JX580_01610 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D JX580_10610 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D JX580_01790 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D JX580_04680 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tmh00860] D JX580_05390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JX580_06320 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D JX580_01940 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D JX580_10670 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D JX580_11755 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D JX580_11760 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D JX580_00180 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D JX580_11670 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D JX580_06350 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D JX580_06085 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D JX580_08895 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D JX580_07290 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D JX580_07710 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D JX580_07645 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D JX580_07720 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D JX580_07750 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D JX580_07730 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D JX580_07745 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D JX580_07735 histidine phosphatase family protein K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D JX580_11110 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] D JX580_00580 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tmh00130] D JX580_00205 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D JX580_10905 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D JX580_03640 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D JX580_04245 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D JX580_03635 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D JX580_02535 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D JX580_05905 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tmh00900] D JX580_02690 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D JX580_02700 hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D JX580_02680 GHMP kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D JX580_02685 hypothetical protein K00869 MVK; mevalonate kinase [EC:2.7.1.36] D JX580_02675 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33] D JX580_02695 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D JX580_07200 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D JX580_09360 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D JX580_06680 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JX580_09020 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D JX580_00665 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tmh00523] D JX580_00380 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05065 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05080 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05380 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05070 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JX580_05780 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JX580_05075 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D JX580_05775 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D JX580_05080 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05380 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:tmh00332] D JX580_09340 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D JX580_04660 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tmh00261] D JX580_05215 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D JX580_05210 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D JX580_07760 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D JX580_02815 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D JX580_04735 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D JX580_06440 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tmh00521] D JX580_07815 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D JX580_10635 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D JX580_09935 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D JX580_03355 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JX580_09110 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D JX580_00380 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05065 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05080 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05380 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05070 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JX580_05780 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D JX580_05075 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D JX580_05775 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D JX580_07815 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:tmh00525] D JX580_00380 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05065 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D JX580_05080 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D JX580_05380 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tmh00401] D JX580_04275 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_03320 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_04265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D JX580_10255 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JX580_10250 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D JX580_02465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JX580_02470 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JX580_04115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D JX580_02475 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tmh00999] D JX580_01795 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D JX580_10675 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation D JX580_10620 oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:tmh00633] D JX580_09600 nfsB; oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tmh03020] D JX580_10160 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JX580_10155 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JX580_10005 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JX580_00225 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tmh03010] D JX580_04285 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D JX580_06700 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JX580_10095 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JX580_10010 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JX580_10040 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JX580_04305 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JX580_10145 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JX580_10055 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JX580_01265 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JX580_10130 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JX580_10015 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JX580_10150 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JX580_10020 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JX580_10060 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JX580_04030 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JX580_03375 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JX580_10080 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JX580_04310 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JX580_10105 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JX580_07555 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JX580_08175 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JX580_10175 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JX580_10110 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JX580_10125 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JX580_10120 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JX580_10065 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JX580_10050 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JX580_10165 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JX580_04320 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JX580_10170 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JX580_10180 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JX580_01260 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JX580_10075 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JX580_10030 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JX580_10090 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JX580_10000 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JX580_10045 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JX580_03390 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JX580_02725 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JX580_09355 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JX580_10100 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JX580_10115 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JX580_10070 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JX580_02400 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D JX580_09350 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JX580_08635 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JX580_10085 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JX580_10035 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JX580_00185 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D JX580_02450 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JX580_08640 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D JX580_11895 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D JX580_02720 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JX580_04695 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D JX580_03875 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01220 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01170 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tmh00970] D JX580_01130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01155 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_03860 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_05560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JX580_05620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JX580_04495 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JX580_06905 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JX580_06915 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JX580_02390 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JX580_05545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JX580_05555 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JX580_05550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JX580_06580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JX580_05625 tRNA-His K14226 tRNA-His; tRNA His D JX580_01135 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_01160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_01185 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_01210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_03865 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_02900 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JX580_06570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JX580_03045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JX580_07120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JX580_02980 tRNA-Met K14230 tRNA-Met; tRNA Met D JX580_09930 tRNA-Met K14230 tRNA-Met; tRNA Met D JX580_08155 tRNA-Ile K14230 tRNA-Met; tRNA Met D JX580_07755 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JX580_02290 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JX580_10205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JX580_01230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JX580_10215 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JX580_06910 tRNA-Val K14237 tRNA-Val; tRNA Val D JX580_06920 tRNA-Val K14237 tRNA-Val; tRNA Val D JX580_03050 tRNA-Val K14237 tRNA-Val; tRNA Val D JX580_05390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JX580_08775 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JX580_08770 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JX580_08780 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JX580_05315 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D JX580_07765 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JX580_07185 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JX580_03145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JX580_03150 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JX580_02710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JX580_04950 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JX580_05320 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JX580_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JX580_10345 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D JX580_06460 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JX580_04645 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JX580_07485 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JX580_06205 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JX580_10325 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JX580_03835 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JX580_09070 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JX580_02730 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JX580_02735 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JX580_01120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JX580_03455 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tmh03060] D JX580_10025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JX580_10190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JX580_02895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JX580_01870 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JX580_01875 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D JX580_01865 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JX580_11905 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JX580_01500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JX580_01100 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JX580_03370 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JX580_09260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JX580_10450 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D JX580_10455 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D JX580_10460 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D JX580_04885 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D JX580_07480 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tmh04122] D JX580_09280 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JX580_10740 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D JX580_03140 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JX580_09150 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JX580_08100 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JX580_00105 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D JX580_00095 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D JX580_00100 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein D JX580_06335 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D JX580_00115 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D JX580_03415 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D JX580_08705 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D JX580_10880 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:tmh03018] D JX580_07085 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D JX580_02425 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D JX580_05835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JX580_04035 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JX580_00170 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JX580_08695 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JX580_00985 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JX580_09225 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JX580_00190 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JX580_09905 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D JX580_06450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JX580_09270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JX580_08255 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JX580_09630 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JX580_08490 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JX580_08755 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tmh03030] D JX580_00785 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_03990 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_06010 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_08030 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_03955 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JX580_02500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JX580_03590 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JX580_04655 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JX580_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JX580_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JX580_05900 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JX580_08165 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D JX580_09370 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JX580_05345 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JX580_06635 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JX580_10795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JX580_06410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tmh03410] D JX580_03725 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JX580_02370 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JX580_00240 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D JX580_01540 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JX580_10615 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JX580_10795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JX580_06240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JX580_06410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tmh03420] D JX580_06975 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JX580_09450 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D JX580_02170 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D JX580_06600 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D JX580_00200 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JX580_10795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JX580_06410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tmh03430] D JX580_02655 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JX580_08265 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D JX580_00200 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JX580_05365 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JX580_05360 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JX580_06240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JX580_09370 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JX580_03955 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JX580_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JX580_02500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JX580_04655 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JX580_03590 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JX580_00785 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_03990 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_06010 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_08030 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JX580_06410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tmh03440] D JX580_06240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JX580_09370 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JX580_11890 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D JX580_04900 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D JX580_02510 recR; recombination protein RecR K06187 recR; recombination protein RecR D JX580_07775 recA; recombinase RecA K03553 recA; recombination protein RecA D JX580_10795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JX580_07165 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JX580_07160 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JX580_07170 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D JX580_00210 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JX580_03975 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JX580_03955 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JX580_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JX580_02500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JX580_04655 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JX580_03590 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JX580_00785 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_03990 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_06010 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_08030 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JX580_09655 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tmh02010] D JX580_07325 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D JX580_11125 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D JX580_07320 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D JX580_11130 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D JX580_07315 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D JX580_11135 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D JX580_09500 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D JX580_09505 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D JX580_09510 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D JX580_11815 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JX580_11810 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JX580_11820 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JX580_03280 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D JX580_03275 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JX580_03270 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JX580_03285 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D JX580_03265 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JX580_04355 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D JX580_04325 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D JX580_04330 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D JX580_04335 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JX580_06760 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D JX580_01400 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D JX580_01390 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D JX580_01395 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D JX580_06180 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D JX580_06190 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D JX580_06195 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D JX580_06185 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D JX580_05060 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D JX580_05050 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D JX580_05055 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D JX580_06965 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D JX580_06960 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D JX580_00030 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D JX580_00025 heme ABC transporter permease K02195 ccmC; heme exporter protein C D JX580_00020 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D JX580_00015 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D JX580_02210 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D JX580_02215 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D JX580_03235 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D JX580_03405 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D JX580_11320 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D JX580_07420 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D JX580_00475 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:tmh03070] D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein D JX580_03885 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D JX580_08550 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D JX580_05030 hypothetical protein K02452 gspC; general secretion pathway protein C D JX580_08555 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D JX580_08540 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D JX580_08530 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G D JX580_08535 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D JX580_08525 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D JX580_08520 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D JX580_08515 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D JX580_08510 hypothetical protein K02461 gspL; general secretion pathway protein L D JX580_08505 type II secretion system protein M K02462 gspM; general secretion pathway protein M D JX580_03895 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JX580_08545 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JX580_01870 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JX580_01875 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D JX580_10190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JX580_02895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JX580_10025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JX580_01865 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JX580_11905 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JX580_01500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JX580_09260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JX580_01100 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JX580_03370 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JX580_10450 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D JX580_10455 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D JX580_10460 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:tmh02020] D JX580_04350 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JX580_04345 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JX580_04355 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D JX580_04875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JX580_01010 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D JX580_01005 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D JX580_11310 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D JX580_11295 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D JX580_02115 flagellin FliC K02406 fliC; flagellin D JX580_02120 flagellin FliC K02406 fliC; flagellin D JX580_02125 flagellin FliC K02406 fliC; flagellin D JX580_07975 flagellin-like protein K02406 fliC; flagellin D JX580_08305 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D JX580_02770 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JX580_03165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_08735 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_11870 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JX580_04065 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D JX580_04070 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC D JX580_04075 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D JX580_04080 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D JX580_04085 type II secretion system F family protein K12510 tadB; tight adherence protein B D JX580_04090 type II secretion system F family protein K12511 tadC; tight adherence protein C D JX580_06710 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D JX580_06165 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JX580_03925 sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JX580_06160 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JX580_07620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JX580_10360 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JX580_10365 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D JX580_05425 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein D JX580_06020 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D JX580_03550 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D JX580_08855 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_11775 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_00735 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_00745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_00750 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01440 DUF3365 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01555 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01745 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_03540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04390 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04510 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_05385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08125 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08910 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_09640 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_10700 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11005 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11255 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11865 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04555 PAS domain S-box protein K03776 aer; aerotaxis receptor D JX580_00740 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D JX580_08285 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D JX580_07940 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_08290 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_01625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_03560 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_08300 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10800 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10840 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_03545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JX580_01825 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_04515 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_08120 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_08410 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JX580_08405 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JX580_04025 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JX580_04720 response regulator K15012 regA; two-component system, response regulator RegA D JX580_03330 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D JX580_03335 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JX580_03340 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D JX580_10415 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D JX580_10410 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D JX580_10400 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein D JX580_03535 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D JX580_00265 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D JX580_01815 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D JX580_03330 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tmh02024] D JX580_10760 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D JX580_08255 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JX580_10255 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D JX580_10250 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D JX580_07220 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D JX580_06865 antibiotic biosynthesis monooxygenase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D JX580_04025 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JX580_07255 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D JX580_03025 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D JX580_04120 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JX580_05565 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JX580_04125 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JX580_06765 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JX580_04130 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JX580_04155 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JX580_11905 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JX580_10190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JX580_02895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JX580_10025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JX580_01865 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JX580_01500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JX580_09260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JX580_01100 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JX580_03370 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tmh02030] D JX580_00735 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_00745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_00750 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01440 DUF3365 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01555 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01745 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_03540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04390 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04510 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_05385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08125 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08910 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_09640 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_10700 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11005 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11255 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11865 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04555 PAS domain S-box protein K03776 aer; aerotaxis receptor D JX580_07940 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_08290 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_00740 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D JX580_08285 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D JX580_01625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_03560 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_08300 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10800 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10840 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_08295 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D JX580_03545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JX580_08855 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_11775 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_01825 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_04515 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_08120 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_07945 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D JX580_03550 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D JX580_08390 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D JX580_08355 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D JX580_08350 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D JX580_02770 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JX580_03165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_08735 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_11870 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_02775 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_03170 OmpA family protein K02557 motB; chemotaxis protein MotB D JX580_03175 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_08730 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_11875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tmh02040] D JX580_08400 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D JX580_08395 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D JX580_08390 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D JX580_08385 hypothetical protein K02411 fliH; flagellar assembly protein FliH D JX580_08380 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JX580_08375 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D JX580_08370 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D JX580_08360 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D JX580_08355 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D JX580_08350 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D JX580_08345 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D JX580_08340 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JX580_08335 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JX580_08330 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JX580_08320 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JX580_08325 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JX580_01820 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D JX580_01835 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D JX580_01840 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D JX580_01845 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D JX580_01850 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D JX580_02015 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D JX580_02020 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D JX580_02025 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D JX580_02030 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D JX580_02040 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D JX580_02045 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D JX580_08055 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO D JX580_08420 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D JX580_02115 flagellin FliC K02406 fliC; flagellin D JX580_02120 flagellin FliC K02406 fliC; flagellin D JX580_02125 flagellin FliC K02406 fliC; flagellin D JX580_07975 flagellin-like protein K02406 fliC; flagellin D JX580_02140 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D JX580_02145 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D JX580_10775 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D JX580_02770 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JX580_03165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_08735 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_11870 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_02775 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_03170 OmpA family protein K02557 motB; chemotaxis protein MotB D JX580_03175 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_08730 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_11875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_01815 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D JX580_08160 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D JX580_06020 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D JX580_08405 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JX580_08305 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D JX580_05835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D JX580_00315 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tmh01501] D JX580_06755 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D JX580_00885 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_08950 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03030 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_08945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_03025 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein D JX580_10690 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JX580_08800 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JX580_01700 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tmh01502] D JX580_01475 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JX580_05895 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JX580_01710 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D JX580_01715 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JX580_01730 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tmh01503] D JX580_08270 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JX580_04875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JX580_11645 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D JX580_00885 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_08950 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03030 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_08945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein D JX580_06645 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tmh01000] C 01001 Protein kinases [BR:tmh01001] D JX580_09485 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D JX580_04350 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JX580_01010 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D JX580_11310 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D JX580_06165 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JX580_10360 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JX580_07940 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_08290 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_08410 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JX580_01450 PAS domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_02620 PAS domain S-box protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_02630 PhnD/SsuA/transferrin family substrate-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_02635 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_04530 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_04535 PhnD/SsuA/transferrin family substrate-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_09885 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tmh01009] D JX580_07930 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D JX580_03660 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:tmh01002] D JX580_07480 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D JX580_07210 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JX580_00950 HyaD/HybD family hydrogenase maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D JX580_07955 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D JX580_09310 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D JX580_11320 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D JX580_02855 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D JX580_01075 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D JX580_00090 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JX580_05800 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D JX580_09205 N-acetylglutaminylglutamine amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D JX580_01765 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D JX580_08435 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D JX580_11860 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D JX580_04040 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D JX580_09250 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D JX580_09255 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-] D JX580_02205 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D JX580_06730 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D JX580_06705 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D JX580_03630 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D JX580_02875 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JX580_09020 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D JX580_08765 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D JX580_09155 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D JX580_06670 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D JX580_07700 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D JX580_04875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JX580_08810 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JX580_06940 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D JX580_03410 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D JX580_06930 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D JX580_06390 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D JX580_08020 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D JX580_04885 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D JX580_00275 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D JX580_01760 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D JX580_06605 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D JX580_02580 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D JX580_00120 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D JX580_07050 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D JX580_08240 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D JX580_08245 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:tmh01003] D JX580_04430 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-] D JX580_07790 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D JX580_10690 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JX580_05015 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D JX580_00325 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tmh01005] D JX580_06645 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D JX580_06640 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D JX580_01490 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D JX580_06655 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D JX580_05300 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D JX580_06835 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D JX580_03400 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JX580_10810 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D JX580_03020 lipid A deacylase LpxR family protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D JX580_00485 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D JX580_05840 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D JX580_06825 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D JX580_03250 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D JX580_07820 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D JX580_00505 O-antigen ligase family protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D JX580_00500 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D JX580_00410 glycosyltransferase K12987 migA; alpha-1,6-rhamnosyltransferase [EC:2.4.1.-] D JX580_00490 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D JX580_03155 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D JX580_00495 hldE; bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D JX580_05015 hypothetical protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tmh01011] D JX580_03305 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D JX580_06750 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D JX580_01470 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D JX580_01720 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D JX580_01705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D JX580_01475 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D JX580_05895 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D JX580_01715 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D JX580_01730 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D JX580_08200 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D JX580_07535 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D JX580_10690 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D JX580_08800 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D JX580_01700 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JX580_08810 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D JX580_05325 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D JX580_07455 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D JX580_02050 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D JX580_11170 DUF3393 domain-containing protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D JX580_05330 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D JX580_03580 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D JX580_08270 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JX580_07010 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tmh01004] D JX580_02465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D JX580_02460 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D JX580_01240 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D JX580_02480 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D JX580_02470 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D JX580_01235 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D JX580_06650 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D JX580_04115 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D JX580_03015 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D JX580_03960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D JX580_02455 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D JX580_08185 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D JX580_03160 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:tmh01006] D JX580_07200 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D JX580_09360 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D JX580_06680 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D JX580_08260 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JX580_05905 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D JX580_10905 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:tmh01007] D JX580_05390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JX580_05315 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D JX580_06625 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D JX580_01120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JX580_03455 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JX580_05320 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JX580_10325 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JX580_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JX580_07485 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JX580_06460 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JX580_04645 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JX580_06205 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JX580_07185 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JX580_09070 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JX580_03145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JX580_03150 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JX580_04950 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JX580_03835 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JX580_02710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JX580_07765 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JX580_02730 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JX580_02735 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JX580_02165 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D JX580_06265 alaC; alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D JX580_03320 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_04265 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D JX580_10510 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D JX580_10715 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D JX580_01970 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D JX580_06310 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D JX580_10220 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D JX580_01940 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D JX580_08815 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D JX580_01975 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D JX580_04255 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:tmh00194] D JX580_10920 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D JX580_10925 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D JX580_10930 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D JX580_10935 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D JX580_10940 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D JX580_10945 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D JX580_10950 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D JX580_10955 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JX580_10965 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tmh03000] D JX580_09730 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D JX580_11630 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D JX580_00605 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D JX580_07990 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D JX580_04025 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D JX580_08445 helix-turn-helix domain-containing protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D JX580_09095 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D JX580_11340 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D JX580_00370 helix-turn-helix transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D JX580_06170 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D JX580_11790 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D JX580_05510 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D JX580_09740 DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D JX580_05425 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein D JX580_03220 LysR family transcriptional regulator K02019 modE; molybdate transport system regulatory protein D JX580_09495 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein D JX580_05965 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D JX580_11570 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D JX580_07605 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D JX580_10970 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JX580_08465 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D JX580_02325 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D JX580_04460 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D JX580_08455 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D JX580_06630 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D JX580_07260 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D JX580_01680 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tmh03021] D JX580_10005 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JX580_10160 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JX580_10155 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JX580_00225 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JX580_08160 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D JX580_10475 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D JX580_06020 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D JX580_08305 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D JX580_04000 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D JX580_07235 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D JX580_10185 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JX580_02665 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D JX580_02670 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D JX580_04870 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC D JX580_06630 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D JX580_04850 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D JX580_07225 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D JX580_00190 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JX580_05420 hypothetical protein K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:tmh03019] D JX580_02425 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D JX580_03850 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D JX580_04890 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JX580_09905 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D JX580_08695 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JX580_09025 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D JX580_00170 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D JX580_00985 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JX580_09225 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JX580_05835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JX580_04035 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JX580_00190 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D JX580_06450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JX580_09270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JX580_08255 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JX580_09630 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D JX580_08490 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D JX580_08755 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D JX580_07085 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D JX580_05955 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:tmh03011] D JX580_04285 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D JX580_06700 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D JX580_10095 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D JX580_10010 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D JX580_10040 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D JX580_04305 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D JX580_10145 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D JX580_10055 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D JX580_01265 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D JX580_10130 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D JX580_10015 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D JX580_10150 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D JX580_10020 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D JX580_10060 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D JX580_04030 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D JX580_03375 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D JX580_10080 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D JX580_04310 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D JX580_10105 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D JX580_07555 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D JX580_08175 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D JX580_10175 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D JX580_10110 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D JX580_10125 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D JX580_10120 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D JX580_10065 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D JX580_10050 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D JX580_04320 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D JX580_10170 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D JX580_10180 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D JX580_10165 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D JX580_01260 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D JX580_10075 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D JX580_10030 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D JX580_10090 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D JX580_10000 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D JX580_10045 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D JX580_03390 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D JX580_02725 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D JX580_09355 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D JX580_10100 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D JX580_10115 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D JX580_10070 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D JX580_09350 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D JX580_08635 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D JX580_10085 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D JX580_10035 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D JX580_00185 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D JX580_02450 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D JX580_08640 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D JX580_11895 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D JX580_02720 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D JX580_04695 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D JX580_02400 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D JX580_03875 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01220 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01170 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:tmh03009] D JX580_04890 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JX580_09025 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D JX580_04895 era; GTPase Era K03595 era; GTPase D JX580_09345 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D JX580_06630 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D JX580_04000 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D JX580_07235 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D JX580_10185 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D JX580_07855 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D JX580_10350 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D JX580_00690 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D JX580_01520 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D JX580_01785 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D JX580_10980 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JX580_01685 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D JX580_01670 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D JX580_05595 rlmA; 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D JX580_08690 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D JX580_02870 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D JX580_07560 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D JX580_08925 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D JX580_02225 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D JX580_07450 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D JX580_09080 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D JX580_01565 TRAM domain-containing protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D JX580_03530 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JX580_06115 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JX580_05915 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D JX580_02430 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D JX580_07590 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D JX580_08095 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D JX580_09115 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D JX580_02610 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D JX580_03380 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D JX580_06070 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D JX580_05865 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D JX580_05500 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D JX580_03420 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D JX580_06900 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D JX580_02425 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D JX580_03850 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D JX580_08460 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D JX580_09230 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D JX580_00985 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D JX580_00755 DEAD/DEAH box helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D JX580_08875 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D JX580_09055 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D JX580_06095 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D JX580_08250 hflX; GTPase HflX K03665 hflX; GTPase D JX580_11800 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D JX580_00220 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D JX580_04010 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D JX580_03995 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D JX580_07565 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D JX580_07880 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D JX580_02865 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D JX580_06405 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D JX580_03230 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor D JX580_02410 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D JX580_02445 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tmh03016] D JX580_00645 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D JX580_05390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JX580_03835 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D JX580_07485 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D JX580_04645 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JX580_03760 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D JX580_05315 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D JX580_10325 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JX580_06205 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D JX580_07185 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JX580_07765 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D JX580_02710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D JX580_04950 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D JX580_05320 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D JX580_06460 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D JX580_09070 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D JX580_02730 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D JX580_02735 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D JX580_01120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JX580_03455 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D JX580_10445 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JX580_10680 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D JX580_02820 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D JX580_04015 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D JX580_00730 truD; tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D JX580_11800 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D JX580_08260 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D JX580_11620 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D JX580_10985 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JX580_10710 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D JX580_05230 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D JX580_07345 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D JX580_11900 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D JX580_09195 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D JX580_00150 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D JX580_02010 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D JX580_07270 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D JX580_03145 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D JX580_03150 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D JX580_06625 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D JX580_07950 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D JX580_05370 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D JX580_05505 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D JX580_07890 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D JX580_11205 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D JX580_11210 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D JX580_11070 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D JX580_09105 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D JX580_10830 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D JX580_03385 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D JX580_01110 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D JX580_03530 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JX580_06115 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D JX580_08100 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D JX580_10815 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D JX580_03140 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JX580_09150 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D JX580_09090 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D JX580_04860 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D JX580_10595 mnmC; FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D JX580_01855 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D JX580_07125 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D JX580_07205 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D JX580_02785 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D JX580_11010 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D JX580_08280 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D JX580_10705 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D JX580_01860 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D JX580_08705 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D JX580_05850 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D JX580_10605 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D JX580_06060 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D JX580_08180 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D JX580_08275 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D JX580_09990 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D JX580_08695 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D JX580_04035 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D JX580_04585 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D JX580_05435 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D JX580_11265 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:tmh03012] D JX580_04005 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D JX580_02715 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D JX580_06955 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D JX580_06695 elongation factor Ts K02357 tsf; elongation factor Ts D JX580_10135 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JX580_10200 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JX580_10140 fusA; elongation factor G K02355 fusA; elongation factor G D JX580_06325 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D JX580_06685 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D JX580_06330 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D JX580_02405 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D JX580_06885 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D JX580_04755 efp; elongation factor P K02356 efp; elongation factor P D JX580_06210 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D JX580_01880 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:tmh03110] D JX580_08080 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D JX580_04050 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D JX580_06935 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D JX580_02555 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D JX580_07930 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D JX580_06450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JX580_09270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JX580_06445 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D JX580_00765 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D JX580_08090 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D JX580_04635 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein D JX580_08840 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D JX580_06455 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D JX580_11675 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D JX580_09275 groES; co-chaperone GroES K04078 groES; chaperonin GroES D JX580_04875 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D JX580_02875 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D JX580_10955 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D JX580_01100 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JX580_01640 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D JX580_00935 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D JX580_00905 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D JX580_11470 molecular chaperone TorD family protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D JX580_05305 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D JX580_05310 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D JX580_01630 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D JX580_07925 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D JX580_06795 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D JX580_06005 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D JX580_06090 slyD; peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D JX580_05590 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D JX580_09210 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D JX580_07845 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D JX580_00195 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D JX580_04825 trxA; thioredoxin K03671 TXN; thioredoxin D JX580_11830 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D JX580_02650 trxA; thioredoxin K05838 ybbN; putative thioredoxin D JX580_01095 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3 D JX580_09200 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D JX580_11645 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D JX580_06475 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D JX580_04775 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D JX580_00045 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:tmh04131] D JX580_09085 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D JX580_00670 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JX580_00680 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_04420 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_07930 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:tmh03051] D JX580_07930 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:tmh03032] D JX580_05345 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D JX580_06925 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JX580_02740 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D JX580_04290 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JX580_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JX580_05900 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D JX580_08165 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D JX580_09370 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JX580_03955 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JX580_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JX580_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JX580_04655 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JX580_03590 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JX580_00785 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_03990 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_06010 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_08030 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_02500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JX580_06635 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D JX580_10795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JX580_06410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JX580_03800 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D JX580_04250 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JX580_11695 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JX580_02765 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JX580_02380 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JX580_10330 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tmh03036] D JX580_04890 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D JX580_01620 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D JX580_06925 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JX580_02740 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D JX580_04290 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JX580_00765 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D JX580_08090 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D JX580_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D JX580_01655 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D JX580_05510 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D JX580_08255 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D JX580_06420 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D JX580_05925 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D JX580_05920 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D JX580_01485 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D JX580_05830 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D JX580_01700 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D JX580_04930 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D JX580_01695 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D JX580_01480 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D JX580_01725 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D JX580_01690 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JX580_06415 hypothetical protein K03528 zipA; cell division protein ZipA D JX580_03620 cell division protein ZapA K09888 zapA; cell division protein ZapA D JX580_08270 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D JX580_00885 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_08950 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_06995 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D JX580_06990 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D JX580_06985 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D JX580_08785 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JX580_08790 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D JX580_08795 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D JX580_08805 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D JX580_00630 AAA family ATPase K03496 parA; chromosome partitioning protein D JX580_10975 ParA family protein K03496 parA; chromosome partitioning protein D JX580_10970 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D JX580_02765 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JX580_02380 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JX580_10985 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D JX580_10980 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D JX580_02575 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D JX580_06480 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D JX580_03765 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D JX580_08990 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D JX580_08970 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D JX580_09000 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D JX580_11660 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tmh03400] D JX580_01280 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D JX580_08045 DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D JX580_09395 deoxyribodipyrimidine photo-lyase/cryptochrome family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D JX580_02370 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D JX580_00240 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D JX580_03725 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D JX580_01510 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D JX580_09940 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D JX580_09385 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D JX580_01540 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D JX580_10615 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D JX580_06240 DHH family phosphoesterase K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D JX580_06410 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D JX580_10795 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D JX580_09450 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D JX580_02170 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D JX580_06600 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D JX580_00200 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D JX580_10160 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D JX580_10155 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D JX580_10005 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D JX580_00225 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D JX580_06975 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D JX580_02655 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D JX580_08265 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D JX580_05365 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D JX580_05360 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D JX580_03955 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D JX580_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D JX580_02200 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D JX580_04655 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D JX580_03590 AAA family ATPase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D JX580_00785 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_03990 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_06010 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_08030 GIY-YIG nuclease family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D JX580_02500 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D JX580_09370 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JX580_07775 recA; recombinase RecA K03553 recA; recombination protein RecA D JX580_07165 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D JX580_07160 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D JX580_07170 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D JX580_09655 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D JX580_03345 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D JX580_11890 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D JX580_00210 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JX580_03975 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D JX580_04900 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D JX580_02510 recR; recombination protein RecR K06187 recR; recombination protein RecR D JX580_07985 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D JX580_01360 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D JX580_04250 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D JX580_11695 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D JX580_10330 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D JX580_06925 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D JX580_05510 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D JX580_02740 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D JX580_04290 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D JX580_09225 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D JX580_01620 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D JX580_08025 Y-family DNA polymerase K03502 umuC; DNA polymerase V D JX580_08020 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-] D JX580_06390 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D JX580_07770 regulatory protein RecX K03565 recX; regulatory protein D JX580_00700 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D JX580_04835 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D JX580_03210 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D JX580_03205 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:tmh03029] D JX580_03335 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D JX580_04005 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D JX580_02715 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D JX580_06695 elongation factor Ts K02357 tsf; elongation factor Ts D JX580_10135 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JX580_10200 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JX580_10140 fusA; elongation factor G K02355 fusA; elongation factor G D JX580_04895 era; GTPase Era K03595 era; GTPase D JX580_01120 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D JX580_04645 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D JX580_07185 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D JX580_10325 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D JX580_08775 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D JX580_08770 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D JX580_08780 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D JX580_11080 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial D JX580_09370 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D JX580_06665 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D JX580_06450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JX580_06455 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D JX580_09270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JX580_09275 groES; co-chaperone GroES K04078 groES; chaperonin GroES D JX580_06445 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D JX580_09200 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D JX580_03765 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D JX580_11905 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JX580_01645 SCO family protein K07152 SCO1; protein SCO1 D JX580_07930 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tmh02000] D JX580_03405 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D JX580_00420 ABC transporter ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D JX580_11320 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D JX580_07420 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D JX580_00475 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JX580_03600 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial D JX580_03950 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D JX580_09500 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D JX580_09505 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D JX580_09510 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D JX580_07325 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D JX580_11125 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D JX580_07320 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D JX580_11130 ntrB; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D JX580_07315 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D JX580_11135 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D JX580_11815 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D JX580_11810 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D JX580_11820 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D JX580_05410 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D JX580_05415 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D JX580_05405 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D JX580_11395 fetB; iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D JX580_11390 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D JX580_03275 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D JX580_03270 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D JX580_03265 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D JX580_03280 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D JX580_03285 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D JX580_04355 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein D JX580_04325 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein D JX580_04330 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D JX580_04335 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D JX580_06760 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D JX580_04120 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JX580_05565 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D JX580_04125 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JX580_06765 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D JX580_04130 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D JX580_04155 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D JX580_11095 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D JX580_11090 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D JX580_11085 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D JX580_07725 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D JX580_09545 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D JX580_09535 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D JX580_09525 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D JX580_01400 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D JX580_01390 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D JX580_01395 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D JX580_06180 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D JX580_06190 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D JX580_06195 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D JX580_06185 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D JX580_05050 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D JX580_05060 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein D JX580_05055 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D JX580_02210 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D JX580_02215 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D JX580_03235 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D JX580_06965 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein D JX580_06960 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D JX580_00030 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D JX580_00025 heme ABC transporter permease K02195 ccmC; heme exporter protein C D JX580_00020 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D JX580_00015 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D JX580_03295 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D JX580_03290 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D JX580_03005 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D JX580_03010 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D JX580_01415 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D JX580_05880 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D JX580_03435 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D JX580_04365 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D JX580_09315 ion transporter K10716 kch; voltage-gated potassium channel D JX580_07610 ion transporter K08714 VGSC; voltage-gated sodium channel D JX580_03675 ammonium transporter K03320 amt; ammonium transporter, Amt family D JX580_07600 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family D JX580_07040 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D JX580_02665 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D JX580_11240 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D JX580_11245 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D JX580_11355 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D JX580_11360 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D JX580_00230 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D JX580_01930 mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D JX580_06255 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D JX580_08210 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D JX580_08220 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D JX580_02770 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JX580_03165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_08735 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_11870 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_02775 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_03170 OmpA family protein K02557 motB; chemotaxis protein MotB D JX580_03175 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_08730 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_11875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_03470 exbB; TonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB D JX580_03465 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D JX580_07155 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D JX580_07150 ExbD/TolR family protein K03560 tolR; biopolymer transport protein TolR D JX580_04945 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D JX580_03360 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D JX580_01560 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D JX580_04690 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D JX580_11055 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D JX580_07640 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D JX580_11040 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D JX580_11105 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D JX580_01650 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JX580_06175 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JX580_09550 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JX580_11155 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein D JX580_07415 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D JX580_03025 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D JX580_06665 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D JX580_09060 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D JX580_04740 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D JX580_07595 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D JX580_07995 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D JX580_03615 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA D JX580_03610 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB D JX580_03240 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D JX580_07840 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein D JX580_04650 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D JX580_07875 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D JX580_03030 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_08945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_08065 L-lactate permease K03303 lutP; lactate permease D JX580_07540 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D JX580_09290 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D JX580_05475 SLAC1 anion channel family protein K03304 tehA; tellurite resistance protein D JX580_09835 SLAC1 anion channel family protein K03304 tehA; tellurite resistance protein D JX580_03255 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D JX580_03970 cation acetate symporter K14393 actP; cation/acetate symporter D JX580_07020 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter D JX580_10375 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D JX580_10370 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D JX580_04370 chrA; chromate efflux transporter K07240 chrA; chromate transporter D JX580_00295 dauA; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D JX580_06225 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D JX580_11725 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter D JX580_00815 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D JX580_00810 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D JX580_00805 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D JX580_00800 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D JX580_00795 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D JX580_00790 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D JX580_02250 NADH-quinone oxidoreductase subunit K K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D JX580_02260 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D JX580_02265 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D JX580_02230 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D JX580_02235 pH regulation protein F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D JX580_02240 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D JX580_07535 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D JX580_01725 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW D JX580_07135 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D JX580_08440 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D JX580_07145 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D JX580_07140 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D JX580_00470 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D JX580_07425 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D JX580_11325 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein D JX580_00885 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_08950 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_01990 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D JX580_00040 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF D JX580_08215 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:tmh02044] D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein D JX580_00475 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D JX580_00470 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system D JX580_07420 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D JX580_07425 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system D JX580_07415 TolC family outer membrane protein K12543 lapE; outer membrane protein, adhesin transport system D JX580_11325 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein D JX580_11320 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D JX580_05030 hypothetical protein K02452 gspC; general secretion pathway protein C D JX580_08555 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C D JX580_03885 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D JX580_08550 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D JX580_03895 tadA; Flp pilus assembly complex ATPase component TadA K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JX580_08545 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D JX580_08540 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D JX580_08530 prepilin-type N-terminal cleavage/methylation domain-containing protein K02456 gspG; general secretion pathway protein G D JX580_08535 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D JX580_08525 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D JX580_08520 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D JX580_08515 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D JX580_08510 hypothetical protein K02461 gspL; general secretion pathway protein L D JX580_08505 type II secretion system protein M K02462 gspM; general secretion pathway protein M D JX580_08500 gspN; type II secretion system protein N K02463 gspN; general secretion pathway protein N D JX580_07210 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JX580_03900 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D JX580_02190 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D JX580_04065 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D JX580_04070 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC D JX580_04075 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D JX580_04080 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D JX580_04085 type II secretion system F family protein K12510 tadB; tight adherence protein B D JX580_04090 type II secretion system F family protein K12511 tadC; tight adherence protein C D JX580_03880 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM D JX580_08605 YggT family protein K02221 yggT; YggT family protein D JX580_07065 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA D JX580_06365 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D JX580_08320 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JX580_08325 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JX580_03570 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D JX580_08395 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D JX580_08385 hypothetical protein K02411 fliH; flagellar assembly protein FliH D JX580_08380 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JX580_08350 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D JX580_08345 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D JX580_08340 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JX580_08335 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JX580_08330 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JX580_06475 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D JX580_01500 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D JX580_01100 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D JX580_01870 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D JX580_10190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D JX580_01875 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D JX580_02895 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D JX580_10025 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D JX580_03370 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D JX580_09260 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D JX580_01865 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D JX580_11905 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D JX580_10450 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D JX580_10455 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D JX580_10460 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tmh02042] D JX580_03360 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:tmh02022] D JX580_04350 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D JX580_04345 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D JX580_01010 HAMP domain-containing protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D JX580_01005 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D JX580_11310 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D JX580_11295 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D JX580_01435 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D JX580_06030 response regulator K02483 K02483; two-component system, OmpR family, response regulator D JX580_06165 two-component sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D JX580_03925 sigma-54-dependent Fis family transcriptional regulator K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JX580_06160 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D JX580_10360 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D JX580_10365 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D JX580_07940 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_08290 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_01625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_03560 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_08300 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10800 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10840 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_03545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JX580_08855 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_11775 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_01825 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_04515 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_08120 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_08410 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JX580_08405 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JX580_04720 response regulator K15012 regA; two-component system, response regulator RegA D JX580_00265 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D JX580_01450 PAS domain-containing protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_02620 PAS domain S-box protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_02630 PhnD/SsuA/transferrin family substrate-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_02635 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_04530 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_04535 PhnD/SsuA/transferrin family substrate-binding protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D JX580_09885 response regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:tmh02035] D JX580_07940 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_08290 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D JX580_00740 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D JX580_08285 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D JX580_07945 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D JX580_03550 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D JX580_03545 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D JX580_08855 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_11775 PAS domain S-box protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D JX580_01625 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_03560 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_08300 chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10800 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_10840 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D JX580_08295 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D JX580_01825 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_04515 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_08120 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D JX580_00735 MCP four helix bundle domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_00745 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_00750 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01440 DUF3365 domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01555 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_01745 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_03540 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04390 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04510 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_05385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08125 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_08910 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_09640 PAS domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_10700 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11005 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11255 HAMP domain-containing protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_11865 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein D JX580_04555 PAS domain S-box protein K03776 aer; aerotaxis receptor D JX580_08385 hypothetical protein K02411 fliH; flagellar assembly protein FliH D JX580_08380 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D JX580_08375 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D JX580_08345 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D JX580_08340 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D JX580_08335 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D JX580_08330 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D JX580_08320 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D JX580_08325 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D JX580_08390 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D JX580_08355 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D JX580_08350 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D JX580_08395 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D JX580_02030 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D JX580_01820 flgA; flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D JX580_02025 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D JX580_08360 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D JX580_08400 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D JX580_08370 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D JX580_01835 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D JX580_01840 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D JX580_01845 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D JX580_02015 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D JX580_02020 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D JX580_01850 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D JX580_02040 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D JX580_02045 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D JX580_08055 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO D JX580_08420 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D JX580_02115 flagellin FliC K02406 fliC; flagellin D JX580_02120 flagellin FliC K02406 fliC; flagellin D JX580_02125 flagellin FliC K02406 fliC; flagellin D JX580_07975 flagellin-like protein K02406 fliC; flagellin D JX580_02140 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D JX580_02145 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D JX580_10775 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D JX580_08305 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D JX580_02770 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D JX580_03165 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_08735 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_11870 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D JX580_02775 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_03170 OmpA family protein K02557 motB; chemotaxis protein MotB D JX580_03175 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_08730 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_11875 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D JX580_08410 PAS domain-containing protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D JX580_08405 sigma-54-dependent Fis family transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D JX580_01815 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D JX580_02130 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D JX580_02135 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D JX580_08315 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D JX580_08310 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D JX580_02190 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D JX580_03900 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D JX580_07210 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D JX580_04065 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB D JX580_04070 pilus assembly protein N-terminal domain-containing protein K02280 cpaC; pilus assembly protein CpaC D JX580_04075 AAA family ATPase K02282 cpaE; pilus assembly protein CpaE D JX580_04080 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tmh04812] D JX580_08785 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JX580_01690 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JX580_01485 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D JX580_06995 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D JX580_06990 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D JX580_06985 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D JX580_00630 AAA family ATPase K03496 parA; chromosome partitioning protein D JX580_10975 ParA family protein K03496 parA; chromosome partitioning protein D JX580_10970 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tmh04147] D JX580_07930 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D JX580_05835 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D JX580_00670 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D JX580_00675 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D JX580_00680 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_04420 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D JX580_09815 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D JX580_09270 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D JX580_06450 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D JX580_09140 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D JX580_07960 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D JX580_10135 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JX580_10200 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D JX580_10445 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D JX580_10695 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D JX580_11845 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D JX580_11740 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D JX580_05275 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D JX580_08710 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D JX580_07795 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D JX580_07620 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D JX580_10670 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D JX580_09015 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D JX580_05515 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D JX580_09020 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D JX580_07070 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_08700 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D JX580_05535 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D JX580_02890 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tmh02048] D JX580_01360 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D JX580_01365 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D JX580_01330 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D JX580_01355 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D JX580_01345 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D JX580_01350 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D JX580_01340 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d D JX580_06565 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D JX580_11550 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D JX580_06550 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D JX580_11535 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D JX580_06555 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D JX580_11540 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D JX580_08955 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] D JX580_08985 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D JX580_00850 McrC family protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D JX580_09405 winged helix-turn-helix domain-containing protein K07448 mrr; restriction system protein D JX580_04970 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D JX580_11485 type II toxin-antitoxin system PemK/MazF family toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D JX580_04965 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE D JX580_05960 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D JX580_11565 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D JX580_05965 TraY domain-containing protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D JX580_11570 type II toxin-antitoxin system RelB/DinJ family antitoxin K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D JX580_00465 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D JX580_05980 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D JX580_11290 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D JX580_05985 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D JX580_11285 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM D JX580_09485 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D JX580_05445 type II toxin-antitoxin system HicA family toxin K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D JX580_05450 hypothetical protein K18843 hicB; antitoxin HicB D JX580_00305 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D JX580_09455 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D JX580_10865 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D JX580_00310 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D JX580_10860 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D JX580_09745 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D JX580_07670 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D JX580_11595 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D JX580_09740 DNA-binding protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D JX580_07665 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D JX580_04585 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D JX580_05435 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D JX580_11265 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D JX580_05430 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D JX580_06105 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D JX580_11260 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D JX580_06100 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-] D JX580_09575 PIN domain-containing protein K07062 fitB; toxin FitB [EC:3.1.-.-] D JX580_01690 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D JX580_08785 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D JX580_02765 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D JX580_02380 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D JX580_05390 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D JX580_06880 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:tmh01504] D JX580_11310 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D JX580_11295 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D JX580_00885 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_08950 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D JX580_03030 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_08945 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D JX580_03025 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system D JX580_00480 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_05570 TolC family outer membrane protein K12340 tolC; outer membrane protein D JX580_11315 TolC family protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tmh03100] D JX580_01130 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01155 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01205 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_03860 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_05560 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D JX580_01575 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JX580_05620 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D JX580_04495 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D JX580_06905 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JX580_06915 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D JX580_02390 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D JX580_05545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JX580_05555 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D JX580_05550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JX580_06580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D JX580_05625 tRNA-His K14226 tRNA-His; tRNA His D JX580_01135 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_01160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_01185 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_01210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_03865 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D JX580_02900 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JX580_06570 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JX580_03045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D JX580_07120 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D JX580_02980 tRNA-Met K14230 tRNA-Met; tRNA Met D JX580_09930 tRNA-Met K14230 tRNA-Met; tRNA Met D JX580_08155 tRNA-Ile K14230 tRNA-Met; tRNA Met D JX580_07755 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JX580_02290 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D JX580_10205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JX580_01230 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D JX580_10215 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D JX580_06910 tRNA-Val K14237 tRNA-Val; tRNA Val D JX580_06920 tRNA-Val K14237 tRNA-Val; tRNA Val D JX580_03050 tRNA-Val K14237 tRNA-Val; tRNA Val D JX580_03875 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01220 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01170 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D JX580_01145 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D JX580_11480 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D JX580_04360 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D JX580_03200 msrB; peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D JX580_04730 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JX580_09895 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JX580_10890 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D JX580_00945 nickel-dependent hydrogenase large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1] D JX580_11190 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D JX580_11050 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D JX580_05355 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D JX580_06285 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D JX580_07895 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D JX580_01295 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D JX580_07870 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D JX580_06840 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D JX580_00330 sugar phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D JX580_09520 modD; ModD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-] D JX580_02420 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D JX580_01605 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D JX580_08450 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D JX580_03685 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D JX580_03185 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D JX580_09830 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D JX580_09960 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D JX580_05820 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D JX580_06375 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D JX580_01050 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D JX580_08660 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D JX580_10845 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D JX580_03595 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D JX580_09995 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D JX580_10340 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D JX580_02440 maf; septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D JX580_11225 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D JX580_11375 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D JX580_08645 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D JX580_03515 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D JX580_00085 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D JX580_03740 RnfABCDGE type electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D JX580_03745 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D JX580_03750 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D JX580_10385 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D JX580_01530 HAD-IC family P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D JX580_06135 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D JX580_03735 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D JX580_03730 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D JX580_03755 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D JX580_07005 flavodoxin K03839 fldA; flavodoxin I D JX580_00060 NapC/NirT family cytochrome c K02569 napC; cytochrome c-type protein NapC C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D JX580_06715 VOC family protein K08234 yaeR; glyoxylase I family protein D JX580_02185 succinylglutamate desuccinylase/aspartoacylase family protein K14054 mpaA; murein peptide amidase A D JX580_08495 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D JX580_04295 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A D JX580_00525 glycosyltransferase family 25 protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D JX580_11770 heme biosynthesis protein HemY K02498 hemY; HemY protein D JX580_02525 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D JX580_10310 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK C 99988 Secondary metabolism D JX580_11185 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D JX580_09965 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D JX580_10495 cold shock domain-containing protein K03704 cspA; cold shock protein D JX580_03680 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D JX580_05265 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D JX580_04770 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D JX580_05740 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D JX580_08085 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D JX580_06945 trigger factor K03545 tig; trigger factor D JX580_08010 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D JX580_00910 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D JX580_00915 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D JX580_00920 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D JX580_00975 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D JX580_10305 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D JX580_10235 OsmC family protein K07397 yhfA; putative redox protein D JX580_11655 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D JX580_07680 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D JX580_08630 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC D JX580_06075 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D JX580_01660 YraN family protein K07460 yraN; putative endonuclease D JX580_05770 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D JX580_10335 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein D JX580_04940 replication-associated recombination protein A K07478 ycaJ; putative ATPase D JX580_05580 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease D JX580_00865 transposase K07483 K07483; transposase D JX580_05245 transposase K07483 K07483; transposase D JX580_05645 transposase K07483 K07483; transposase D JX580_05685 transposase K07483 K07483; transposase D JX580_05805 transposase K07483 K07483; transposase D JX580_00955 transposase K07491 rayT; REP-associated tyrosine transposase D JX580_04405 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D JX580_04440 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase D JX580_04410 transposase K07496 K07496; putative transposase D JX580_04445 transposase K07496 K07496; putative transposase D JX580_00870 IS3 family transposase K07497 K07497; putative transposase D JX580_05145 IS3 family transposase K07497 K07497; putative transposase D JX580_05250 IS3 family transposase K07497 K07497; putative transposase D JX580_05640 IS3 family transposase K07497 K07497; putative transposase D JX580_05680 IS3 family transposase K07497 K07497; putative transposase D JX580_05765 IS3 family transposase K07497 K07497; putative transposase D JX580_05810 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D JX580_05285 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E D JX580_02505 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D JX580_02220 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D JX580_07115 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D JX580_06745 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth D JX580_06380 septation protein A K06190 ispZ; intracellular septation protein C 99993 Cell motility C 99995 Signaling proteins D JX580_06055 universal stress protein K06149 uspA; universal stress protein A D JX580_00280 typA; translational GTPase TypA K06207 typA; GTP-binding protein D JX580_07885 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D JX580_04725 PhoH family protein K07175 phoH2; PhoH-like ATPase D JX580_03985 CBS domain-containing protein K07182 K07182; CBS domain-containing protein D JX580_06465 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein D JX580_01030 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D JX580_04935 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D JX580_11625 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D JX580_06660 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D JX580_06275 LysM peptidoglycan-binding domain-containing M23 family metallopeptidase K06194 nlpD; lipoprotein NlpD D JX580_05860 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D JX580_00165 AsmA family protein K07289 asmA; AsmA protein D JX580_09480 AI-2E family transporter K11744 tqsA; AI-2 transport protein TqsA D JX580_00035 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D JX580_00050 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D JX580_04340 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D JX580_11020 hypothetical protein K07225 hmuS; putative hemin transport protein D JX580_11030 hypothetical protein K07225 hmuS; putative hemin transport protein D JX580_11115 hypothetical protein K07225 hmuS; putative hemin transport protein D JX580_11275 copper resistance protein B K07233 pcoB; copper resistance protein B D JX580_11345 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D JX580_02600 glucosaminidase domain-containing protein K03796 bax; Bax protein D JX580_01250 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D JX580_01410 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D JX580_01420 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D JX580_01775 YihY family inner membrane protein K07058 K07058; membrane protein D JX580_04780 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D JX580_08760 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D JX580_08105 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D JX580_07025 SlyX family protein K03745 slyX; SlyX protein D JX580_06040 SPOR domain-containing protein K03112 damX; DamX protein D JX580_05875 SEC-C domain-containing protein K09858 K09858; SEC-C motif domain protein D JX580_00825 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D JX580_10465 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein D JX580_11795 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein D JX580_06790 hypothetical protein K06950 K06950; uncharacterized protein D JX580_10470 zinc metallopeptidase K06973 K06973; uncharacterized protein D JX580_02615 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D JX580_03180 cupin domain-containing protein K06995 K06995; uncharacterized protein D JX580_07000 hypothetical protein K07000 K07000; uncharacterized protein D JX580_06500 alpha/beta hydrolase K07018 K07018; uncharacterized protein D JX580_06620 AAA family ATPase K07028 K07028; uncharacterized protein D JX580_01545 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D JX580_00595 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D JX580_04795 permease K07089 K07089; uncharacterized protein D JX580_01045 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JX580_10825 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JX580_11910 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JX580_09515 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D JX580_04425 PhoX family phosphatase K07093 K07093; uncharacterized protein D JX580_06470 PhoX family phosphatase K07093 K07093; uncharacterized protein D JX580_00285 YeeE/YedE family protein K07112 K07112; uncharacterized protein D JX580_00290 YeeE/YedE family protein K07112 K07112; uncharacterized protein D JX580_08565 YeeE/YedE family protein K07112 K07112; uncharacterized protein D JX580_01665 penicillin-binding protein activator K07121 K07121; uncharacterized protein D JX580_03065 SEL1-like repeat protein K07126 K07126; uncharacterized protein D JX580_09725 ATP-binding protein K07133 K07133; uncharacterized protein D JX580_09735 ATP-binding protein K07133 K07133; uncharacterized protein D JX580_06590 MOSC N-terminal beta barrel domain-containing protein K07140 K07140; MOSC domain-containing protein D JX580_08590 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D JX580_00375 DsrE family protein K09004 K09004; uncharacterized protein D JX580_07280 DsrE family protein K09004 K09004; uncharacterized protein D JX580_10500 DsrE family protein K09004 K09004; uncharacterized protein D JX580_08170 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D JX580_08820 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D JX580_06110 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D JX580_01300 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D JX580_05375 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D JX580_06385 YciI family protein K09780 K09780; uncharacterized protein D JX580_06830 Trm112 family protein K09791 K09791; uncharacterized protein D JX580_10300 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D JX580_08000 RnfH family protein K09801 K09801; uncharacterized protein D JX580_11515 BrnT family toxin K09803 K09803; uncharacterized protein D JX580_08865 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D JX580_03625 YecA family protein K09895 K09895; uncharacterized protein D JX580_00635 YcgL domain-containing protein K09902 K09902; uncharacterized protein D JX580_07660 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D JX580_04230 N-acetyltransferase K09919 K09919; uncharacterized protein D JX580_02570 DUF484 family protein K09921 K09921; uncharacterized protein D JX580_05605 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D JX580_06370 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D JX580_08235 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D JX580_03795 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D JX580_06595 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D JX580_04215 DUF3820 family protein K09954 K09954; uncharacterized protein D JX580_07495 DUF3820 family protein K09954 K09954; uncharacterized protein D JX580_04630 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024