+D GENES KO
#
KEGG Orthology (KO) - Thermotoga maritima MSB8
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tmi00010]
D THEMA_06955 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D THEMA_07400 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_03280 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D THEMA_03360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THEMA_01220 phosphate starvation-inducible protein PsiE K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THEMA_01225 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THEMA_05355 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THEMA_00250 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THEMA_03685 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D THEMA_03365 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THEMA_00245 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_05440 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_08515 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_02700 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_05435 MFS transporter K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_08510 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_04835 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D THEMA_03315 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D THEMA_07930 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:tmi00020]
D THEMA_03275 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D THEMA_08600 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_00245 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_05440 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_08515 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_02700 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_05435 MFS transporter K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_08510 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_02695 oxoacid ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D THEMA_05430 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D THEMA_00240 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D THEMA_05445 tungsten formylmethanofuran dehydrogenase subunit G K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D THEMA_01975 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D THEMA_01970 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:tmi00030]
D THEMA_07400 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THEMA_08565 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D THEMA_08570 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D THEMA_02535 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D THEMA_05650 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D THEMA_05415 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_09575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_09580 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_03250 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D THEMA_08955 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D THEMA_06485 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D THEMA_09545 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D THEMA_03965 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D THEMA_06105 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D THEMA_04475 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D THEMA_02510 gluconate kinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D THEMA_04470 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D THEMA_06355 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D THEMA_03360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_03280 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tmi00040]
D THEMA_02560 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D THEMA_04485 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D THEMA_04460 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D THEMA_04465 dioxygenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D THEMA_02525 hypothetical protein K21619 uxaE; tagaturonate epimerase [EC:5.1.2.7]
D THEMA_09050 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D THEMA_03310 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D THEMA_05650 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D THEMA_03345 arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D THEMA_03305 actin K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D THEMA_04225 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D THEMA_05910 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D THEMA_09005 sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D THEMA_08995 sugar kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D THEMA_09000 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D THEMA_03190 fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
C 00051 Fructose and mannose metabolism [PATH:tmi00051]
D THEMA_08195 endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D THEMA_03245 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D THEMA_00975 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D THEMA_00805 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D THEMA_09195 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D THEMA_03190 fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D THEMA_09005 sugar isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D THEMA_08995 sugar kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D THEMA_09000 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_03280 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D THEMA_00500 carbohydrate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D THEMA_05910 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D THEMA_03360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THEMA_01220 phosphate starvation-inducible protein PsiE K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THEMA_08955 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tmi00052]
D THEMA_03315 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D THEMA_08380 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D THEMA_00155 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D THEMA_08375 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D THEMA_02130 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D THEMA_06955 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D THEMA_08365 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D THEMA_03175 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D THEMA_08355 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D THEMA_08370 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D THEMA_03345 arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_03280 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D THEMA_07250 beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:tmi00053]
D THEMA_09050 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D THEMA_03310 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:tmi00500]
D THEMA_07250 beta-fructosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D THEMA_04675 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D THEMA_04935 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D THEMA_05475 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D THEMA_05480 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D THEMA_06670 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D THEMA_04930 glycosyl transferase K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D THEMA_07930 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D THEMA_03525 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D THEMA_03530 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D THEMA_00160 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D THEMA_07125 glycoside hydrolase K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D THEMA_08495 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D THEMA_04980 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D THEMA_05005 alpha-amlyase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D THEMA_05995 alpha-amlyase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D THEMA_05025 cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D THEMA_02895 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D THEMA_02770 trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245]
D THEMA_06955 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D THEMA_07400 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THEMA_03245 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:tmi00620]
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THEMA_00245 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_05440 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_08515 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_02700 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_05435 MFS transporter K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_08510 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_03355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D THEMA_08695 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D THEMA_02840 propanediol utilization phosphotransacylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D THEMA_03685 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D THEMA_06460 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D THEMA_04835 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D THEMA_01965 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D THEMA_04165 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D THEMA_00235 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D THEMA_01975 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D THEMA_01970 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D THEMA_03365 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THEMA_01910 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D THEMA_01915 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tmi00630]
D THEMA_03275 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D THEMA_07310 2-hydroxyacid dehydrogenase K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D THEMA_08690 aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D THEMA_09630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THEMA_01060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THEMA_03660 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D THEMA_03655 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D THEMA_03670 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_03665 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D THEMA_06355 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D THEMA_04475 ketohydroxyglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:tmi00640]
D THEMA_03355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D THEMA_08695 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D THEMA_02840 propanediol utilization phosphotransacylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THEMA_03275 citrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D THEMA_04835 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D THEMA_08410 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D THEMA_02610 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:tmi00650]
D THEMA_05455 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D THEMA_05465 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D THEMA_05460 phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D THEMA_00235 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D THEMA_01075 propionyl-CoA carboxylase K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D THEMA_01080 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THEMA_00245 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_05440 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_08515 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_02700 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_05435 MFS transporter K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_08510 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_01935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THEMA_01930 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tmi00660]
D THEMA_01935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THEMA_01930 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D THEMA_01905 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_03270 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_01900 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_03265 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_01895 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tmi00562]
D THEMA_07245 inositol phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D THEMA_07215 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D THEMA_07220 nucleotidyl transferase K07281 ipct; 1L-myo-inositol 1-phosphate cytidylyltransferase [EC:2.7.7.74]
D THEMA_07225 CDP-alcohol phosphatidyltransferase K07291 dipps; CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.8.34]
D THEMA_02655 oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D THEMA_02665 alcohol dehydrogenase K22231 iolM; scyllo-inosose 3-dehydrogenase [EC:1.1.1.-]
D THEMA_02660 creatinine amidohydrolase K22232 iolN; 3-dehydro-scyllo-inosose hydrolase [EC:3.7.1.-]
D THEMA_02645 hypothetical protein K22233 iolO; 5-keto-L-gluconate epimerase [EC:5.1.-.-]
D THEMA_01220 phosphate starvation-inducible protein PsiE K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
C 00566 Sulfoquinovose metabolism
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tmi00190]
D THEMA_08260 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D THEMA_08255 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D THEMA_08250 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D THEMA_03590 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D THEMA_04740 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D THEMA_03585 NADP oxidoreductase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D THEMA_04750 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D THEMA_08265 NADH dehydrogenase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D THEMA_06190 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D THEMA_06200 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D THEMA_06195 ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D THEMA_06185 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D THEMA_06205 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D THEMA_06170 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THEMA_06180 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D THEMA_06175 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D THEMA_01730 pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tmi00710]
D THEMA_01220 phosphate starvation-inducible protein PsiE K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THEMA_01225 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THEMA_03360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THEMA_05415 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_09575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_09580 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_08955 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D THEMA_05650 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D THEMA_03250 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D THEMA_03365 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
C 00720 Other carbon fixation pathways [PATH:tmi00720]
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THEMA_03365 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D THEMA_01975 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D THEMA_01970 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D THEMA_00245 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_05440 2-ketoisovalerate ferredoxin reductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_08515 2-oxoacid:ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D THEMA_02700 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_05435 MFS transporter K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_08510 2-oxoacid ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D THEMA_02695 oxoacid ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D THEMA_05430 2-oxoacid:ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D THEMA_00240 ferredoxin K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D THEMA_05445 tungsten formylmethanofuran dehydrogenase subunit G K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D THEMA_08600 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D THEMA_05395 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D THEMA_05390 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D THEMA_02750 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D THEMA_08695 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D THEMA_02840 propanediol utilization phosphotransacylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D THEMA_03355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:tmi00680]
D THEMA_02750 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D THEMA_01060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THEMA_06355 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D THEMA_00250 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THEMA_03360 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_03280 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D THEMA_03355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D THEMA_08695 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D THEMA_05355 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THEMA_03090 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D THEMA_07465 phosphoglycerate kinase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D THEMA_00665 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:tmi00910]
D THEMA_08475 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D THEMA_09280 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D THEMA_09630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THEMA_06045 dihydropyrimidine dehydrogenase subunit A K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D THEMA_08245 oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
C 00920 Sulfur metabolism [PATH:tmi00920]
D THEMA_06275 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D THEMA_01335 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D THEMA_01340 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D THEMA_00230 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tmi00061]
D THEMA_01355 acyl carrier protein K02078 acpP; acyl carrier protein
D THEMA_03925 acyl carrier protein K02078 acpP; acyl carrier protein
D THEMA_00660 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D THEMA_00640 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D THEMA_05620 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_08490 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_00645 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D THEMA_00650 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D THEMA_00880 pyridine nucleotide-disulfide oxidoreductase K00530 nroR; rubredoxin---NAD(P)+ reductase [EC:1.18.1.4]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:tmi00074]
D THEMA_01205 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D THEMA_01355 acyl carrier protein K02078 acpP; acyl carrier protein
D THEMA_03925 acyl carrier protein K02078 acpP; acyl carrier protein
D THEMA_00660 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tmi00561]
D THEMA_06355 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D THEMA_02610 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D THEMA_09585 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D THEMA_04055 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D THEMA_07080 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THEMA_07920 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THEMA_05775 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D THEMA_05725 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D THEMA_08370 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:tmi00564]
D THEMA_02830 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D THEMA_07155 ferredoxin K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D THEMA_07080 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THEMA_07920 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THEMA_05775 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D THEMA_06140 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D THEMA_07330 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D THEMA_04865 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D THEMA_03945 HAD family hydrolase K01094 GEP4; phosphatidylglycerophosphatase [EC:3.1.3.27]
D THEMA_03300 araM protein K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tmi00600]
D THEMA_08365 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D THEMA_08370 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tmi00230]
D THEMA_08430 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D THEMA_03965 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D THEMA_06105 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D THEMA_08100 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D THEMA_08085 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D THEMA_08095 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D THEMA_08105 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D THEMA_08115 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D THEMA_08110 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THEMA_08080 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D THEMA_02490 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D THEMA_02495 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D THEMA_08120 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D THEMA_08870 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D THEMA_08090 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D THEMA_07405 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D THEMA_04780 metallophosphatase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D THEMA_05935 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D THEMA_05550 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THEMA_06270 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THEMA_03695 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D THEMA_07605 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D THEMA_04005 xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D THEMA_05095 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D THEMA_05795 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D THEMA_04215 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D THEMA_02795 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D THEMA_01010 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D THEMA_03755 guanosine polyphosphate pyrophosphohydrolase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D THEMA_08865 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D THEMA_06905 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THEMA_04620 ATPase AAA K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D THEMA_00070 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:tmi00240]
D THEMA_01890 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D THEMA_01885 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D THEMA_06035 pyrB; aspartate carbamoyltransferase K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D THEMA_03045 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D THEMA_03055 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D THEMA_03050 dihydroorotate dehydrogenase K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D THEMA_03065 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D THEMA_03060 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D THEMA_06230 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D THEMA_00070 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THEMA_06500 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D THEMA_00635 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D THEMA_07100 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D THEMA_00900 ATPase AAA K00876 udk; uridine kinase [EC:2.7.1.48]
D THEMA_04780 metallophosphatase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D THEMA_05935 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D THEMA_01055 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D THEMA_06990 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D THEMA_05980 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D THEMA_00410 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D THEMA_02795 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D THEMA_04215 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D THEMA_02705 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D THEMA_08850 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D THEMA_02720 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D THEMA_02480 thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tmi00250]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_02505 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D THEMA_05300 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D THEMA_05295 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D THEMA_08865 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D THEMA_08870 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D THEMA_06035 pyrB; aspartate carbamoyltransferase K00608 pyrBI; aspartate carbamoyltransferase [EC:2.1.3.2]
D THEMA_06045 dihydropyrimidine dehydrogenase subunit A K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D THEMA_08245 oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D THEMA_09280 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D THEMA_09630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THEMA_01890 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D THEMA_01885 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D THEMA_08110 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THEMA_00585 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THEMA_04060 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THEMA_08100 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tmi00260]
D THEMA_06710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THEMA_01940 aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D THEMA_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THEMA_01950 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D THEMA_01945 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D THEMA_05515 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D THEMA_01060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THEMA_07310 2-hydroxyacid dehydrogenase K22982 K22982; hydroxypyruvate reductase [EC:1.1.1.81]
D THEMA_06355 hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D THEMA_05355 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D THEMA_03090 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D THEMA_07465 phosphoglycerate kinase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D THEMA_07315 class V aminotransferase K13290 K13290; serine---pyruvate transaminase [EC:2.6.1.51]
D THEMA_03660 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D THEMA_03655 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D THEMA_03670 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_03665 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D THEMA_02935 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D THEMA_04120 tryptophan synthase susbunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D THEMA_04115 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D THEMA_01980 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tmi00270]
D THEMA_01335 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D THEMA_01340 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D THEMA_03385 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D THEMA_07905 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D THEMA_05955 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D THEMA_01390 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D THEMA_01395 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THEMA_08700 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D THEMA_09670 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D THEMA_00080 mtnA; methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D THEMA_02080 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D THEMA_03940 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THEMA_06710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THEMA_01940 aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D THEMA_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THEMA_01950 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D THEMA_00230 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D THEMA_00225 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D THEMA_00485 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_04835 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D THEMA_03600 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D THEMA_03090 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:tmi00280]
D THEMA_00485 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tmi00290]
D THEMA_02935 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D THEMA_01905 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_03270 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_01900 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_03265 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D THEMA_01895 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D THEMA_01935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THEMA_01930 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D THEMA_01925 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D THEMA_01920 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D THEMA_00485 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THEMA_01910 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D THEMA_01915 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tmi00300]
D THEMA_06710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THEMA_01940 aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D THEMA_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THEMA_06695 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D THEMA_06700 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D THEMA_05275 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D THEMA_05915 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D THEMA_06690 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D THEMA_06715 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D THEMA_06705 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D THEMA_06720 peptidase M20 K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D THEMA_08690 aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D THEMA_03540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D THEMA_03545 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:tmi00220]
D THEMA_08860 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D THEMA_05300 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D THEMA_05295 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D THEMA_08110 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THEMA_09630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THEMA_01890 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D THEMA_01885 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D THEMA_09280 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_05285 ornithine acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D THEMA_05280 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D THEMA_05290 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D THEMA_05275 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tmi00330]
D THEMA_04805 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D THEMA_01395 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D THEMA_01390 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D THEMA_04210 formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D THEMA_01780 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D THEMA_03255 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D THEMA_03260 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:tmi00340]
D THEMA_09150 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D THEMA_09185 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D THEMA_09175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D THEMA_09170 glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D THEMA_09180 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D THEMA_09165 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D THEMA_09160 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D THEMA_00630 histidinol phosphatase K04486 hisK; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D THEMA_09155 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D THEMA_00425 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism [PATH:tmi00350]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_09160 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:tmi00360]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_09160 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D THEMA_04210 formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:tmi00380]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_04210 formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tmi00400]
D THEMA_03000 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D THEMA_02975 bifunctional shikimate kinase/3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D THEMA_02970 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D THEMA_02990 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D THEMA_02980 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D THEMA_04095 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D THEMA_04100 anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D THEMA_04110 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D THEMA_04105 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D THEMA_04120 tryptophan synthase susbunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D THEMA_04115 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D THEMA_01980 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D THEMA_04030 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D THEMA_02995 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_09160 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tmi00410]
D THEMA_09655 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D THEMA_08970 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:tmi00430]
D THEMA_08695 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D THEMA_02840 propanediol utilization phosphotransacylase K15024 K15024; putative phosphotransacetylase [EC:2.3.1.8]
D THEMA_03355 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:tmi00450]
D THEMA_03385 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D THEMA_07905 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D THEMA_07480 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D THEMA_00290 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D THEMA_04135 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D THEMA_08930 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tmi00460]
D THEMA_04675 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D THEMA_04935 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D THEMA_01060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tmi00470]
D THEMA_07985 cystathionine gamma-synthase K29026 aar; alanine/glutamate racemase [EC:5.1.1.1 5.1.1.3]
D THEMA_03430 D-alanyl-alanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THEMA_08110 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D THEMA_03555 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D THEMA_04770 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D THEMA_03600 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D THEMA_06690 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D THEMA_06715 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D THEMA_06265 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:tmi00480]
D THEMA_08600 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D THEMA_02535 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D THEMA_08565 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D THEMA_04805 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D THEMA_01395 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tmi00520]
D THEMA_06100 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D THEMA_09190 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D THEMA_04265 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D THEMA_05670 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D THEMA_00605 hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D THEMA_00580 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D THEMA_03855 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D THEMA_00585 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THEMA_04060 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THEMA_03245 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D THEMA_07400 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THEMA_00975 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D THEMA_03320 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D THEMA_06955 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D THEMA_08380 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D THEMA_00155 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D THEMA_08375 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D THEMA_02130 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D THEMA_00805 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D THEMA_09195 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D THEMA_03525 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D THEMA_03530 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D THEMA_00325 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:tmi00541]
D THEMA_06100 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D THEMA_01750 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D THEMA_01740 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D THEMA_01615 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D THEMA_09190 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D THEMA_00325 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D THEMA_09195 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tmi00511]
D THEMA_08365 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D THEMA_04915 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D THEMA_08175 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D THEMA_06125 glycosyl hydrolase family 2 K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D THEMA_03195 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tmi00542]
D THEMA_00625 glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_06535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:tmi00550]
D THEMA_04265 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D THEMA_05670 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D THEMA_03570 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D THEMA_03555 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D THEMA_03540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D THEMA_03430 D-alanyl-alanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THEMA_03545 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D THEMA_02690 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D THEMA_07325 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D THEMA_00170 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D THEMA_03550 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D THEMA_03565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D THEMA_00205 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THEMA_03560 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_00445 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_01710 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D THEMA_00285 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:tmi00552]
D THEMA_00170 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D THEMA_00625 glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_06535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_00555 lipopolysaccharide biosynthesis protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D THEMA_05725 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D THEMA_00625 glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_06535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:tmi00543]
D THEMA_00625 glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_06535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_01335 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tmi00730]
D THEMA_00710 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D THEMA_00700 thiamine-phosphate synthase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D THEMA_05780 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THEMA_05770 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D THEMA_08000 thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D THEMA_05375 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D THEMA_00715 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D THEMA_04620 ATPase AAA K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D THEMA_05655 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D THEMA_04025 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D THEMA_00195 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D THEMA_06905 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tmi00740]
D THEMA_05065 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D THEMA_05055 riboflavin deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D THEMA_05070 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D THEMA_05060 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D THEMA_00350 FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D THEMA_08430 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:tmi00750]
D THEMA_01945 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D THEMA_02325 pyridoxal biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D THEMA_02330 glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tmi00760]
D THEMA_06030 aspartate dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D THEMA_06025 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D THEMA_06020 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D THEMA_02320 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D THEMA_05550 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THEMA_06270 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D THEMA_04780 metallophosphatase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D THEMA_05935 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D THEMA_04320 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D THEMA_00070 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THEMA_01440 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D THEMA_08070 NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D THEMA_02315 cysteine hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D THEMA_02220 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D THEMA_05570 pnk; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:tmi00770]
D THEMA_01935 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D THEMA_01930 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D THEMA_01925 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D THEMA_01920 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D THEMA_05595 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D THEMA_08970 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D THEMA_00220 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D THEMA_05805 DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D THEMA_00070 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D THEMA_00950 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D THEMA_07390 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D THEMA_01205 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D THEMA_00485 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D THEMA_09655 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tmi00780]
D THEMA_00640 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D THEMA_05620 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_08490 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_00645 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D THEMA_07990 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D THEMA_03605 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tmi00785]
D THEMA_01125 biotin/lipoate A/B protein ligase K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D THEMA_04785 radical SAM protein K09711 lipS1; lipoyl synthase
D THEMA_03510 radical SAM protein K24689 lipS2; lipoyl synthase
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_03660 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D THEMA_03655 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D THEMA_03670 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D THEMA_03665 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tmi00790]
D THEMA_04605 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D THEMA_04025 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D THEMA_04595 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D THEMA_04600 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D THEMA_06040 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D THEMA_03970 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D THEMA_05065 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D THEMA_04610 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D THEMA_00695 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D THEMA_05845 beta-lactamase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
C 00670 One carbon pool by folate [PATH:tmi00670]
D THEMA_06040 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D THEMA_05395 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D THEMA_05390 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D THEMA_01060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THEMA_08095 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D THEMA_08090 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D THEMA_00425 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D THEMA_03670 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D THEMA_03385 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D THEMA_02480 thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D THEMA_06480 formiminotransferase-cyclodeaminase K01746 E4.3.1.4; formiminotetrahydrofolate cyclodeaminase [EC:4.3.1.4]
D THEMA_05955 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D THEMA_03940 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THEMA_03660 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D THEMA_03655 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_03665 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tmi00860]
D THEMA_04795 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THEMA_06985 cobinamide adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D THEMA_09050 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tmi00130]
D THEMA_00885 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D THEMA_06650 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tmi00900]
D THEMA_05375 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D THEMA_00190 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D THEMA_07350 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D THEMA_07410 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D THEMA_01430 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D THEMA_00180 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D THEMA_07095 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D THEMA_03995 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D THEMA_06610 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D THEMA_07325 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D THEMA_05415 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_09575 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D THEMA_09580 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D THEMA_00325 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tmi00946]
D THEMA_04675 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D THEMA_04935 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D THEMA_04420 acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:tmi00332]
D THEMA_03255 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D THEMA_03260 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tmi00261]
D THEMA_06710 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D THEMA_01940 aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D THEMA_06685 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D THEMA_06695 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D THEMA_06700 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tmi00521]
D THEMA_06955 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D THEMA_07215 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D THEMA_07245 inositol phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D THEMA_02655 oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D THEMA_00325 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D THEMA_06955 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D THEMA_00325 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:tmi00401]
D THEMA_02995 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_09160 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D THEMA_04095 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D THEMA_00660 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D THEMA_05620 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_08490 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00975 Biosynthesis of various siderophores
D THEMA_06265 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00998 Biosynthesis of various antibiotics
D THEMA_01355 acyl carrier protein K02078 acpP; acyl carrier protein
D THEMA_03925 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tmi00999]
D THEMA_05955 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D THEMA_04675 glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D THEMA_04935 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
D THEMA_00235 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D THEMA_01075 propionyl-CoA carboxylase K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D THEMA_01080 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation [PATH:tmi00627]
D THEMA_04210 formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D THEMA_06460 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:tmi00633]
D THEMA_02750 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D THEMA_04715 porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D THEMA_04710 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D THEMA_04725 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D THEMA_04720 pyruvate synthase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:tmi00643]
D THEMA_04210 formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tmi03020]
D THEMA_02400 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D THEMA_02395 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D THEMA_06940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D THEMA_05800 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tmi03010]
D THEMA_03905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D THEMA_03890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D THEMA_03885 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D THEMA_07090 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D THEMA_00840 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D THEMA_06830 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D THEMA_06935 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D THEMA_06885 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D THEMA_01650 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D THEMA_06780 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D THEMA_06870 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D THEMA_07050 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D THEMA_06795 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D THEMA_06930 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D THEMA_06775 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D THEMA_06925 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D THEMA_06865 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D THEMA_07620 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D THEMA_06450 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D THEMA_06845 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D THEMA_01640 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D THEMA_06820 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D THEMA_05960 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D THEMA_02415 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D THEMA_06815 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D THEMA_06800 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D THEMA_06805 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D THEMA_06860 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D THEMA_06875 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D THEMA_00320 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D THEMA_02410 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D THEMA_02420 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D THEMA_02405 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D THEMA_07045 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D THEMA_06850 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D THEMA_06895 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D THEMA_06835 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D THEMA_06945 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D THEMA_06880 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D THEMA_06425 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D THEMA_06295 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D THEMA_07025 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D THEMA_06825 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D THEMA_06810 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D THEMA_06855 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D THEMA_06110 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D THEMA_07035 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D THEMA_03450 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D THEMA_06840 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D THEMA_06890 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D THEMA_05820 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D THEMA_04050 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D THEMA_02440 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D THEMA_06995 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D THEMA_06300 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D THEMA_06920 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tmi00970]
D THEMA_03830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THEMA_03895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THEMA_06320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THEMA_03760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_03790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_03800 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_06315 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_06560 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_08390 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D THEMA_05425 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D THEMA_07460 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D THEMA_00895 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THEMA_02735 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THEMA_05260 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THEMA_05890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THEMA_02275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THEMA_03785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THEMA_07625 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THEMA_03795 tRNA-His K14226 tRNA-His; tRNA His
D THEMA_03900 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D THEMA_00380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_00560 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_02270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_07370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_07500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_02265 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THEMA_06310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THEMA_02460 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_02470 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_07630 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_06330 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D THEMA_04085 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THEMA_05885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THEMA_08125 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THEMA_00540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_02310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_03765 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_05310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_01775 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THEMA_02455 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THEMA_03085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THEMA_02435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D THEMA_02450 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D THEMA_06335 tRNA-Val K14237 tRNA-Val; tRNA Val
D THEMA_07240 tRNA-Val K14237 tRNA-Val; tRNA Val
D THEMA_07375 tRNA-Val K14237 tRNA-Val; tRNA Val
D THEMA_04795 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THEMA_07585 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D THEMA_07975 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D THEMA_07970 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D THEMA_03465 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D THEMA_05605 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THEMA_07335 alaS; alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THEMA_07110 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THEMA_03645 glyQ; glycyl-tRNA synthase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D THEMA_03640 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D THEMA_00955 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D THEMA_07430 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D THEMA_01065 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THEMA_07265 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D THEMA_08930 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D THEMA_02035 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D THEMA_05110 valS; valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D THEMA_03960 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THEMA_07535 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D THEMA_05715 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D THEMA_08885 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THEMA_02105 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D THEMA_08900 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THEMA_09145 ATP phosphoribosyltransferase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THEMA_00535 pheS; phenylalanyl-tRNA synthase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D THEMA_00530 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D THEMA_02295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THEMA_02210 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D THEMA_08835 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tmi03060]
D THEMA_06900 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THEMA_02430 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THEMA_02290 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THEMA_00335 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D THEMA_00330 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D THEMA_00340 membrane protein K03210 yajC; preprotein translocase subunit YajC
D THEMA_07010 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THEMA_06390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THEMA_06455 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D THEMA_01820 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THEMA_06420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D THEMA_02375 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D THEMA_02845 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tmi04122]
D THEMA_05780 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THEMA_02075 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D THEMA_05770 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tmi03018]
D THEMA_00250 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THEMA_07615 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D THEMA_01050 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D THEMA_06950 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D THEMA_04885 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D THEMA_01350 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_02850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D THEMA_02145 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THEMA_02045 RNA-binding protein Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tmi03030]
D THEMA_02190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D THEMA_02385 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THEMA_01790 DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D THEMA_00795 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_01235 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_03870 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D THEMA_03415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THEMA_05555 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D THEMA_07055 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D THEMA_01645 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THEMA_00060 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D THEMA_06150 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THEMA_04305 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tmi03410]
D THEMA_02885 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D THEMA_02120 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D THEMA_02905 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D THEMA_06150 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THEMA_06550 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THEMA_04305 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tmi03420]
D THEMA_07065 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D THEMA_02285 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D THEMA_05420 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D THEMA_03400 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D THEMA_08145 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THEMA_06150 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THEMA_04305 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tmi03430]
D THEMA_05645 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D THEMA_07945 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D THEMA_04690 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D THEMA_08145 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THEMA_05385 exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D THEMA_05380 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D THEMA_06550 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THEMA_01645 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THEMA_02385 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THEMA_01790 DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D THEMA_03415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THEMA_00795 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_01235 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_03870 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D THEMA_02190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D THEMA_04305 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:tmi03440]
D THEMA_06550 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THEMA_01645 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THEMA_04875 protein RecA K03553 recA; recombination protein RecA
D THEMA_06150 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THEMA_03975 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D THEMA_05585 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D THEMA_01795 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D THEMA_03705 helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D THEMA_02385 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THEMA_01790 DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D THEMA_03415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THEMA_00795 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_01235 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_03870 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D THEMA_02190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D THEMA_03910 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tmi02010]
D THEMA_07450 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D THEMA_07435 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D THEMA_07440 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D THEMA_07445 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D THEMA_05010 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D THEMA_08310 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D THEMA_05015 maltose ABC transporter permease K10109 malF; maltose/maltodextrin transport system permease protein
D THEMA_08315 maltose ABC transporter permease K10109 malF; maltose/maltodextrin transport system permease protein
D THEMA_05020 maltose ABC transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D THEMA_08320 maltose ABC transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D THEMA_07955 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D THEMA_08170 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D THEMA_02565 sugar ABC transporter substrate-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D THEMA_02570 sugar ABC transporter permease K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D THEMA_02575 sugar ABC transporter permease K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D THEMA_04940 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D THEMA_04945 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D THEMA_04950 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D THEMA_00600 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D THEMA_00595 lactose ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D THEMA_00590 sugar ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D THEMA_04295 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D THEMA_04285 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D THEMA_04280 branched-chain amino acid ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D THEMA_04290 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D THEMA_04235 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_04955 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_09555 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_04245 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D THEMA_04960 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D THEMA_09570 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D THEMA_04230 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D THEMA_04965 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D THEMA_09565 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D THEMA_09550 ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D THEMA_02635 sugar ABC transporter substrate-binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D THEMA_02630 ABC transporter K17238 inoF; inositol-phosphate transport system permease protein
D THEMA_02625 sugar ABC transporter permease K17239 inoG; inositol-phosphate transport system permease protein
D THEMA_02620 sugar ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D THEMA_08745 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D THEMA_08740 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D THEMA_08735 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D THEMA_08015 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D THEMA_08020 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D THEMA_08025 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D THEMA_08030 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D THEMA_01695 amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D THEMA_01700 glnP; glutamine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D THEMA_01705 peptide ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D THEMA_08670 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D THEMA_08665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D THEMA_08660 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D THEMA_08655 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D THEMA_08650 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D THEMA_05505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D THEMA_05500 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D THEMA_05495 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D THEMA_05490 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D THEMA_05485 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D THEMA_04190 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D THEMA_04180 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D THEMA_04185 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D THEMA_00655 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D THEMA_04830 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D THEMA_05930 cobalt ABC transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D THEMA_03615 cbiO; cobalt ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D THEMA_09090 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D THEMA_08055 ABC transporter permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_04585 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_03290 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_03285 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
D THEMA_00500 carbohydrate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:tmi03070]
D THEMA_00335 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D THEMA_00330 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D THEMA_02430 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THEMA_02290 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THEMA_06900 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THEMA_00340 membrane protein K03210 yajC; preprotein translocase subunit YajC
D THEMA_07010 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THEMA_06390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THEMA_01820 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THEMA_06455 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tmi02020]
D THEMA_05975 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D THEMA_04025 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D THEMA_08015 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D THEMA_01815 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THEMA_00860 flagellin K02406 fliC; flagellin
D THEMA_04145 flagellin K02406 fliC; flagellin
D THEMA_00125 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D THEMA_01285 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D THEMA_00005 dnaA; ATPase AAA K02313 dnaA; chromosomal replication initiator protein
D THEMA_01965 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D THEMA_03470 carbon storage regulator K03563 csrA; carbon storage regulator
D THEMA_09630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THEMA_02370 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THEMA_00045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_02580 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_04685 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_07175 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_08610 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_08630 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_01070 chemotaxis protein W K03408 cheW; purine-binding chemotaxis protein CheW
D THEMA_01160 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D THEMA_01155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THEMA_01165 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THEMA_02685 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THEMA_03115 C4-dicarboxylate ABC transporter K11688 dctP; TRAP-type transport system periplasmic protein
D THEMA_03105 C4-dicarboxylate ABC transporter K11690 dctM; TRAP-type transport system large permease protein
D THEMA_01470 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D THEMA_09190 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D THEMA_05475 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D THEMA_05480 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D THEMA_06670 endoglucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D THEMA_04380 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecule (CAM) interaction
C 04517 IgSF CAM signaling
C 04518 Integrin signaling
C 04519 Cadherin signaling
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagocytosis
D THEMA_04025 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
C 04142 Lysosome biogenesis [PATH:tmi04142]
D THEMA_09050 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D THEMA_03195 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D THEMA_06125 glycosyl hydrolase family 2 K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 04146 Peroxisome
D THEMA_08600 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
C 04149 Peroxisome - yeast
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D THEMA_04805 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
C 04156 Integrated stress response (ISR) signaling pathway [PATH:tmi04156]
D THEMA_02460 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_02470 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_07630 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_02850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D THEMA_02145 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tmi02024]
D THEMA_02045 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D THEMA_04095 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D THEMA_08670 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D THEMA_08665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D THEMA_08660 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D THEMA_08655 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D THEMA_08650 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D THEMA_02560 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2]
D THEMA_05055 riboflavin deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D THEMA_05505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D THEMA_05500 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D THEMA_05495 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D THEMA_05490 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D THEMA_05485 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D THEMA_02020 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_02390 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_03180 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_03225 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_04450 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_04525 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_04645 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08215 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08335 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08590 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_09025 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_02015 ABC transporter substrate-binding protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_02155 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_03220 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_04445 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_04505 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_04650 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_08220 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_08340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_08595 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_09030 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_02010 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_02160 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_03215 peptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_04440 peptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_04510 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_04655 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_08225 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_08345 peptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_08575 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_09035 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_02165 dppD; peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_02180 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_03210 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_04435 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_04515 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_04660 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_08230 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_08360 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_08580 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_09040 dppD; peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_02025 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_02170 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_03205 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_04430 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_04520 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_04665 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_08235 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_08350 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_09045 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_07010 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D THEMA_02430 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THEMA_02290 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THEMA_06900 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THEMA_00340 membrane protein K03210 yajC; preprotein translocase subunit YajC
D THEMA_06390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THEMA_01820 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THEMA_06455 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tmi02030]
D THEMA_00045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_02580 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_04685 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_07175 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_08610 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_08630 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_05010 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D THEMA_08310 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D THEMA_04235 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_04955 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_09555 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_01155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THEMA_01070 chemotaxis protein W K03408 cheW; purine-binding chemotaxis protein CheW
D THEMA_01160 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D THEMA_01165 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THEMA_00115 chemotaxis protein CheY K03410 cheC; chemotaxis protein CheC
D THEMA_06155 chemotaxis protein CheY K03409 cheX; chemotaxis protein CheX
D THEMA_02685 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THEMA_00120 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D THEMA_02370 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THEMA_03625 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D THEMA_01270 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D THEMA_01265 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D THEMA_01285 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D THEMA_01280 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tmi02040]
D THEMA_07510 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D THEMA_03620 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D THEMA_03625 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D THEMA_03630 flagellar export protein FliJ K02411 fliH; flagellar assembly protein FliH
D THEMA_03635 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D THEMA_02115 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D THEMA_01275 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D THEMA_01270 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D THEMA_01265 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D THEMA_01170 flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D THEMA_01175 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D THEMA_01180 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D THEMA_00085 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D THEMA_00095 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D THEMA_00090 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D THEMA_06580 flagellar protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D THEMA_07520 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D THEMA_07515 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D THEMA_01300 flagellar hook capping protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D THEMA_01295 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D THEMA_06570 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D THEMA_06575 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D THEMA_06585 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D THEMA_06590 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D THEMA_01495 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D THEMA_04390 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D THEMA_04395 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D THEMA_00860 flagellin K02406 fliC; flagellin
D THEMA_04145 flagellin K02406 fliC; flagellin
D THEMA_08730 flagellar hook protein FliD K02407 fliD; flagellar hook-associated protein 2
D THEMA_08440 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D THEMA_01285 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D THEMA_01280 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D THEMA_04380 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D THEMA_07060 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D THEMA_00125 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D THEMA_00250 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagosome formation
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:tmi04981]
D THEMA_06040 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D THEMA_01060 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D THEMA_03385 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism
D THEMA_03385 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tmi01501]
D THEMA_00605 hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D THEMA_05505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D THEMA_05500 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D THEMA_05495 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D THEMA_05490 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D THEMA_05485 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D THEMA_00205 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THEMA_01710 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D THEMA_00285 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tmi01502]
D THEMA_03430 D-alanyl-alanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THEMA_03545 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D THEMA_03550 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D THEMA_03565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tmi01503]
D THEMA_05810 hypothetical protein K19236 ldtA_B_C_E; L,D-transpeptidase
D THEMA_01815 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tmi01000]
C 01001 Protein kinases [BR:tmi01001]
D THEMA_00990 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D THEMA_01445 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D THEMA_05975 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D THEMA_00370 ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D THEMA_04170 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D THEMA_08045 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D THEMA_01155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tmi01009]
D THEMA_03940 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:tmi01002]
D THEMA_02375 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36]
D THEMA_05760 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D THEMA_05095 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D THEMA_08100 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D THEMA_00585 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THEMA_04060 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D THEMA_05810 hypothetical protein K19236 ldtA_B_C_E; L,D-transpeptidase
D THEMA_06645 abortive phage infection protein K07052 K07052; CAAX protease family protein
D THEMA_09530 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D THEMA_04160 peptidase M20 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D THEMA_05915 diaminopimelate aminotransferase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D THEMA_06720 peptidase M20 K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D THEMA_06910 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D THEMA_04590 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D THEMA_01765 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D THEMA_00185 zinc protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D THEMA_01815 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THEMA_01190 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D THEMA_06080 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D THEMA_08945 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D THEMA_06420 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D THEMA_00920 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D THEMA_08920 peptidase S54 K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D THEMA_02070 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D THEMA_01025 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D THEMA_01030 TldD protein K03568 tldD; TldD protein
D THEMA_09430 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D THEMA_05080 membrane protein K04087 hflC; modulator of FtsH protease HflC
D THEMA_05085 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:tmi01003]
D THEMA_00160 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D THEMA_00205 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THEMA_03560 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_00445 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_07290 glycosyl transferase family 1 K21011 pelF; polysaccharide biosynthesis protein PelF
D THEMA_00555 lipopolysaccharide biosynthesis protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D THEMA_00625 glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_06535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_08180 group 1 glycosyl transferase K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tmi01005]
D THEMA_00625 glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D THEMA_06535 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tmi01011]
D THEMA_04265 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D THEMA_05670 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D THEMA_03570 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D THEMA_03555 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D THEMA_03540 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D THEMA_03430 D-alanyl-alanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D THEMA_03550 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D THEMA_03565 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D THEMA_00170 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D THEMA_04375 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D THEMA_00205 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D THEMA_01710 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D THEMA_00285 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D THEMA_03560 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_00445 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_05810 hypothetical protein K19236 ldtA_B_C_E; L,D-transpeptidase
D THEMA_00030 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:tmi01004]
D THEMA_00660 malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D THEMA_00640 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D THEMA_05620 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_08490 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D THEMA_00645 hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D THEMA_00650 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D THEMA_04055 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D THEMA_07080 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THEMA_07920 membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D THEMA_05775 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:tmi01008]
C 01006 Prenyltransferases [BR:tmi01006]
D THEMA_03995 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D THEMA_06610 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D THEMA_07325 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D THEMA_02050 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D THEMA_06650 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:tmi01007]
D THEMA_04795 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THEMA_07585 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D THEMA_02295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THEMA_02210 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D THEMA_01065 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THEMA_08885 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THEMA_08930 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D THEMA_07535 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D THEMA_05110 valS; valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D THEMA_03960 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THEMA_05715 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D THEMA_07110 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THEMA_08900 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THEMA_09145 ATP phosphoribosyltransferase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THEMA_03645 glyQ; glycyl-tRNA synthase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D THEMA_03640 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D THEMA_07430 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D THEMA_02105 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D THEMA_00955 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D THEMA_05605 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THEMA_07335 alaS; alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THEMA_00535 pheS; phenylalanyl-tRNA synthase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D THEMA_00530 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D THEMA_07265 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D THEMA_05750 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_08060 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D THEMA_09160 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D THEMA_05275 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D THEMA_00485 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tmi00194]
D THEMA_06205 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D THEMA_06200 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D THEMA_06195 ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D THEMA_06190 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D THEMA_06185 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D THEMA_06180 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D THEMA_06175 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D THEMA_06170 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tmi03000]
D THEMA_09015 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D THEMA_03230 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D THEMA_04890 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D THEMA_08240 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D THEMA_08330 LacI family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D THEMA_09600 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D THEMA_03350 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D THEMA_04195 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D THEMA_05325 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D THEMA_06725 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D THEMA_08455 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D THEMA_09665 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D THEMA_01655 DNA-binding protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D THEMA_08190 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D THEMA_03605 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D THEMA_03955 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D THEMA_07180 REX family transcriptional regulator K01926 rex; redox-sensing transcriptional repressor
D THEMA_07135 antiterminator K02443 glpP; glycerol uptake operon antiterminator
D THEMA_07160 glycerol uptake operon antiterminator K02443 glpP; glycerol uptake operon antiterminator
D THEMA_02860 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D THEMA_00385 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D THEMA_05705 nrdR; NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:tmi03021]
D THEMA_06940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D THEMA_02400 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D THEMA_02395 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D THEMA_05800 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D THEMA_07060 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D THEMA_06260 RNA polymerase sigma 70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D THEMA_02005 RNA polymerase sigma70 factor K27000 sigH; RNA polymerase sigma-H factor
D THEMA_00125 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D THEMA_05320 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D THEMA_05400 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D THEMA_02425 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D THEMA_07105 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D THEMA_00990 anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D THEMA_07560 sigma E positive regulator RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D THEMA_05710 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D THEMA_06950 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tmi03019]
D THEMA_06220 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D THEMA_08835 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D THEMA_01350 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D THEMA_04885 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D THEMA_01050 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D THEMA_03440 phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D THEMA_00250 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THEMA_07615 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D THEMA_06950 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D THEMA_03680 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D THEMA_02850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D THEMA_02145 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THEMA_02045 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D THEMA_03470 carbon storage regulator K03563 csrA; carbon storage regulator
D THEMA_05690 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:tmi03011]
D THEMA_07090 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D THEMA_00840 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D THEMA_06830 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D THEMA_06935 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D THEMA_06885 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D THEMA_01650 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D THEMA_06780 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D THEMA_06870 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D THEMA_07050 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D THEMA_06795 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D THEMA_06930 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D THEMA_06775 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D THEMA_06925 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D THEMA_06865 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D THEMA_07620 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D THEMA_06450 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D THEMA_06845 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D THEMA_01640 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D THEMA_06820 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D THEMA_05960 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D THEMA_02415 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D THEMA_06815 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D THEMA_06800 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D THEMA_06805 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D THEMA_06860 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D THEMA_06875 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D THEMA_00320 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D THEMA_02410 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D THEMA_02420 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D THEMA_02405 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D THEMA_07045 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D THEMA_06850 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D THEMA_06895 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D THEMA_06835 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D THEMA_06945 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D THEMA_06880 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D THEMA_06425 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D THEMA_06295 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D THEMA_07025 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D THEMA_06825 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D THEMA_06810 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D THEMA_06855 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D THEMA_07035 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D THEMA_03450 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D THEMA_06840 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D THEMA_06890 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D THEMA_05820 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D THEMA_04050 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D THEMA_02440 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D THEMA_06995 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D THEMA_06300 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D THEMA_06920 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D THEMA_06110 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D THEMA_03905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D THEMA_03890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D THEMA_03885 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tmi03009]
D THEMA_08835 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D THEMA_00405 era; GTPase Era K03595 era; GTPase
D THEMA_04315 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D THEMA_05320 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D THEMA_05400 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D THEMA_02425 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D THEMA_03405 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D THEMA_07130 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D THEMA_06740 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D THEMA_05925 SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D THEMA_07425 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D THEMA_01130 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D THEMA_00275 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D THEMA_01120 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D THEMA_06400 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D THEMA_05530 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D THEMA_00420 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D THEMA_05755 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D THEMA_04125 radical SAM protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D THEMA_05665 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D THEMA_08880 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D THEMA_09650 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D THEMA_02380 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D THEMA_06595 hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D THEMA_06440 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D THEMA_04860 ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D THEMA_08960 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D THEMA_06220 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-]
D THEMA_06555 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D THEMA_05535 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D THEMA_05655 ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D THEMA_07085 GTP-binding protein Der K03977 engA; GTPase
D THEMA_00810 ribosome biogenesis GTPase RsgA K14540 rbgA; ribosome biogenesis GTPase A
D THEMA_02040 GTP-binding protein K03665 hflX; GTPase
D THEMA_00400 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D THEMA_00375 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D THEMA_01010 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D THEMA_00360 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D THEMA_05315 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D THEMA_04065 hypothetical protein K09710 ybeB; ribosome-associated protein
D THEMA_06755 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D THEMA_06215 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D THEMA_08135 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D THEMA_04045 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tmi03016]
D THEMA_00315 beta-lactamase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D THEMA_01090 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D THEMA_07555 tRNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D THEMA_08940 archease K24956 ZBTB8OS; protein archease
D THEMA_04795 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THEMA_02105 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D THEMA_07535 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D THEMA_03960 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THEMA_08930 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D THEMA_08885 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THEMA_05715 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D THEMA_07110 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THEMA_05605 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THEMA_07335 alaS; alanyl-tRNA synthase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D THEMA_00955 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D THEMA_07430 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D THEMA_01065 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D THEMA_05110 valS; valyl-tRNA synthase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D THEMA_08900 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THEMA_09145 ATP phosphoribosyltransferase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D THEMA_00535 pheS; phenylalanyl-tRNA synthase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D THEMA_00530 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D THEMA_02295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THEMA_02210 tryptophanyl-tRNA synthase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D THEMA_01005 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D THEMA_01400 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D THEMA_00490 radical SAM protein K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
D THEMA_00915 SAM-dependent methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D THEMA_00010 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D THEMA_06410 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D THEMA_00355 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D THEMA_05780 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THEMA_00375 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D THEMA_02050 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D THEMA_03390 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D THEMA_03410 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D THEMA_07000 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D THEMA_01015 bacterial RNase P K01978 rnpB; RNase P catalytic RNA component
D THEMA_04870 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D THEMA_03645 glyQ; glycyl-tRNA synthase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D THEMA_03640 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D THEMA_07265 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16]
D THEMA_07585 gltX; glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D THEMA_04325 hydrolase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D THEMA_00985 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D THEMA_06435 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D THEMA_02075 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D THEMA_03745 arginosuccinate synthase K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D THEMA_01800 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D THEMA_04610 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D THEMA_00695 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D THEMA_01000 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D THEMA_06475 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D THEMA_05770 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D THEMA_01770 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D THEMA_00265 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D THEMA_04075 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D THEMA_06085 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D THEMA_06735 hypothetical protein K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D THEMA_01050 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D THEMA_07615 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tmi03012]
D THEMA_00775 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D THEMA_06305 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D THEMA_06225 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D THEMA_06790 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D THEMA_05990 elongation factor G K02355 fusA; elongation factor G
D THEMA_06785 fusA; elongation factor P K02355 fusA; elongation factor G
D THEMA_07525 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D THEMA_07320 ribosome recycling factor K02838 frr; ribosome recycling factor
D THEMA_02230 modification methylase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D THEMA_06115 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D THEMA_06915 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D THEMA_05410 elongation factor P K02356 efp; elongation factor P
D THEMA_06385 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tmi03110]
D THEMA_00270 ATP-dependent Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D THEMA_03740 ATP-dependent Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D THEMA_07360 ATP-dependent Clp protease ATP-binding protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D THEMA_04070 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D THEMA_02065 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D THEMA_02850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D THEMA_02145 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THEMA_00395 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D THEMA_07345 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D THEMA_00390 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D THEMA_02845 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D THEMA_02150 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D THEMA_01815 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D THEMA_01765 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D THEMA_06170 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D THEMA_09205 YruB family glutaredoxin K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:tmi04131]
D THEMA_04915 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D THEMA_08175 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D THEMA_01225 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THEMA_03685 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:tmi03032]
D THEMA_03395 integration host factor K03530 hupB; DNA-binding protein HU-beta
D THEMA_00005 dnaA; ATPase AAA K02313 dnaA; chromosomal replication initiator protein
D THEMA_05555 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D THEMA_07055 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D THEMA_01645 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THEMA_02385 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THEMA_01790 DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D THEMA_03415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THEMA_03870 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D THEMA_02190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D THEMA_00795 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_01235 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_00060 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D THEMA_06150 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THEMA_04305 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D THEMA_08935 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D THEMA_00475 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D THEMA_03435 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D THEMA_03935 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:tmi03036]
D THEMA_08835 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D THEMA_03395 integration host factor K03530 hupB; DNA-binding protein HU-beta
D THEMA_00005 dnaA; ATPase AAA K02313 dnaA; chromosomal replication initiator protein
D THEMA_02045 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D THEMA_08425 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D THEMA_02205 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A
D THEMA_02200 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D THEMA_00465 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D THEMA_00285 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D THEMA_03560 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_00460 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D THEMA_09125 minC; selenocysteine lyase K03610 minC; septum site-determining protein MinC
D THEMA_04820 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D THEMA_01725 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D THEMA_06565 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D THEMA_00445 cell cycle protein K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_03410 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D THEMA_01130 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D THEMA_00985 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D THEMA_06290 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D THEMA_06980 GTP-binding protein YsxC K03978 engB; GTP-binding protein
D THEMA_05700 Sporulation regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tmi03400]
D THEMA_00200 methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D THEMA_02885 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D THEMA_02120 DNA polymerase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D THEMA_02905 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D THEMA_04845 endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7]
D THEMA_06550 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D THEMA_04305 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D THEMA_06150 DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D THEMA_02285 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D THEMA_05420 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D THEMA_03400 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D THEMA_08145 ATPase AAA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D THEMA_02400 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D THEMA_02395 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D THEMA_06940 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D THEMA_05800 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D THEMA_07065 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D THEMA_05645 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D THEMA_07945 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D THEMA_04690 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D THEMA_05385 exodeoxyribonuclease VII K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D THEMA_05380 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D THEMA_02385 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D THEMA_01790 DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D THEMA_03415 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D THEMA_03870 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D THEMA_02190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D THEMA_00795 DNA polymerase III subunit gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_01235 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D THEMA_01645 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THEMA_04875 protein RecA K03553 recA; recombination protein RecA
D THEMA_03975 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D THEMA_05585 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D THEMA_01795 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D THEMA_03910 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D THEMA_06065 double-stranded DNA repair protein Rad50 K03546 sbcC; DNA repair protein SbcC/Rad50
D THEMA_06070 metallophosphatase K03547 sbcD; DNA repair protein SbcD/Mre11
D THEMA_03735 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D THEMA_03705 helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D THEMA_05205 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D THEMA_08935 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D THEMA_00475 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D THEMA_03435 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D THEMA_03395 integration host factor K03530 hupB; DNA-binding protein HU-beta
D THEMA_08945 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D THEMA_04880 recombinase RecX K03565 recX; regulatory protein
D THEMA_04215 ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D THEMA_06275 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tmi03029]
D THEMA_00775 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D THEMA_06305 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D THEMA_06225 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D THEMA_06790 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D THEMA_05990 elongation factor G K02355 fusA; elongation factor G
D THEMA_06785 fusA; elongation factor P K02355 fusA; elongation factor G
D THEMA_00405 era; GTPase Era K03595 era; GTPase
D THEMA_02295 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D THEMA_03960 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D THEMA_07110 aspS; aspartyl-tRNA synthase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D THEMA_08885 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D THEMA_07975 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D THEMA_07970 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D THEMA_03465 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D THEMA_01645 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D THEMA_02850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D THEMA_00390 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D THEMA_02145 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THEMA_02150 groES; molecular chaperone GroES K04078 groES; chaperonin GroES
D THEMA_00395 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D THEMA_05780 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D THEMA_06290 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D THEMA_07010 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tmi02000]
D THEMA_08055 ABC transporter permease K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_04585 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_03290 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_03285 multidrug ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D THEMA_07450 spermidine/putrescine ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D THEMA_07435 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D THEMA_07440 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D THEMA_07445 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D THEMA_02250 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D THEMA_03720 nitrate ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D THEMA_03715 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D THEMA_02255 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D THEMA_03710 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D THEMA_05010 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D THEMA_08310 sugar ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D THEMA_05015 maltose ABC transporter permease K10109 malF; maltose/maltodextrin transport system permease protein
D THEMA_08315 maltose ABC transporter permease K10109 malF; maltose/maltodextrin transport system permease protein
D THEMA_05020 maltose ABC transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D THEMA_08320 maltose ABC transporter permease K10110 malG; maltose/maltodextrin transport system permease protein
D THEMA_07955 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D THEMA_08170 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D THEMA_04940 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D THEMA_04945 ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D THEMA_04950 sugar ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D THEMA_00600 sugar ABC transporter substrate-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D THEMA_00595 lactose ABC transporter permease K17245 chiF; putative chitobiose transport system permease protein
D THEMA_00590 sugar ABC transporter permease K17246 chiG; putative chitobiose transport system permease protein
D THEMA_02565 sugar ABC transporter substrate-binding protein K17241 aguE; alpha-1,4-digalacturonate transport system substrate-binding protein
D THEMA_02570 sugar ABC transporter permease K17242 aguF; alpha-1,4-digalacturonate transport system permease protein
D THEMA_02575 sugar ABC transporter permease K17243 aguG; alpha-1,4-digalacturonate transport system permease protein
D THEMA_04235 sugar ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_04955 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_09555 ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D THEMA_04245 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D THEMA_04960 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D THEMA_09570 sugar ABC transporter permease K10440 rbsC; ribose transport system permease protein
D THEMA_04230 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D THEMA_04965 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D THEMA_09565 D-ribose transporter ATP binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D THEMA_02635 sugar ABC transporter substrate-binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D THEMA_02630 ABC transporter K17238 inoF; inositol-phosphate transport system permease protein
D THEMA_02625 sugar ABC transporter permease K17239 inoG; inositol-phosphate transport system permease protein
D THEMA_02620 sugar ABC transporter ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D THEMA_08745 glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D THEMA_08740 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D THEMA_08735 glycerol-3-phosphate ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D THEMA_04295 membrane protein K07335 bmpA; basic membrane protein A and related proteins
D THEMA_04285 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D THEMA_04280 branched-chain amino acid ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D THEMA_04290 heme ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D THEMA_03775 membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D THEMA_01685 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D THEMA_03340 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D THEMA_04895 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D THEMA_08155 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D THEMA_01680 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D THEMA_03335 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D THEMA_04900 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D THEMA_08160 ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D THEMA_03330 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D THEMA_04905 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D THEMA_08165 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D THEMA_08015 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D THEMA_08020 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D THEMA_08025 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D THEMA_08030 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D THEMA_01695 amino acid ABC transporter substrate-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D THEMA_01700 glnP; glutamine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D THEMA_01705 peptide ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D THEMA_08670 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D THEMA_08665 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D THEMA_08660 ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D THEMA_08655 ABC transporter K01995 livG; branched-chain amino acid transport system ATP-binding protein
D THEMA_08650 amino acid ABC transporter ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D THEMA_08485 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D THEMA_05505 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D THEMA_05500 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D THEMA_05495 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D THEMA_05490 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D THEMA_05485 peptide ABC transporter substrate-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D THEMA_02020 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_02390 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_03180 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_03225 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_04450 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_04525 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_04645 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08200 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08215 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08335 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_08590 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_09025 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D THEMA_02015 ABC transporter substrate-binding protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_02155 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_03220 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_04445 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_04505 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_04650 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_08220 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_08340 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_08595 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_09030 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D THEMA_02010 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_02160 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_03215 peptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_04440 peptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_04510 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_04655 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_08225 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_08345 peptide ABC transporter K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_08575 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_09035 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D THEMA_02165 dppD; peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_02180 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_03210 methionine ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_04435 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_04515 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_04660 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_08230 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_08360 ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_08580 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_09040 dppD; peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D THEMA_02025 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_02170 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_03205 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_04430 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_04520 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_04665 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_08235 peptide ABC transporter ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_08350 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_09045 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D THEMA_03820 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D THEMA_03815 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D THEMA_03810 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D THEMA_04405 iron ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D THEMA_04410 iron ABC transporter K25027 btuC; cobalamin transport system permease protein
D THEMA_04415 ABC transporter K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D THEMA_04190 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D THEMA_04180 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D THEMA_04185 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D THEMA_00655 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D THEMA_04830 cobalt transporter K16785 ecfT; energy-coupling factor transport system permease protein
D THEMA_05930 cobalt ABC transporter K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D THEMA_03615 cbiO; cobalt ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D THEMA_09090 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D THEMA_09215 ABC transporter permease K25147 berB; beta-exotoxin I transport system permease protein
D THEMA_09220 ABC transporter K25148 berA; beta-exotoxin I transport system ATP-binding protein
D THEMA_00680 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_00830 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_01960 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_02780 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_02785 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_07295 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_07715 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_07810 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_07820 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_07825 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_08845 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D THEMA_00685 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_00825 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_01955 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_02775 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_07300 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_07710 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_07830 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D THEMA_01135 multidrug ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D THEMA_02960 ABC transporter substrate-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D THEMA_01140 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D THEMA_02955 peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D THEMA_07230 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D THEMA_07495 iron ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D THEMA_00575 multidrug transporter MatE K26939 norM; MATE family, multidrug efflux pump
D THEMA_05735 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D THEMA_09315 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D THEMA_09200 major facilitator transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D THEMA_06235 MFS transporter K28762 niaP; MFS transporter, niacin uptake porter
D THEMA_07170 glycerol transporter K02440 glpF; glycerol uptake facilitator
D THEMA_09075 potassium channel protein K10716 kch; voltage-gated potassium channel
D THEMA_02715 ammonium transporter K03320 amt; ammonium transporter, Amt family
D THEMA_06465 mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D THEMA_08530 magnesium transporter K06213 mgtE; magnesium transporter
D THEMA_01285 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D THEMA_01280 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D THEMA_01870 magnesium transporter K03284 corA; magnesium transporter
D THEMA_04700 chromosome condensation protein CrcB K06199 crcB; fluoride exporter
D THEMA_00415 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D THEMA_01470 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D THEMA_01985 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D THEMA_05545 protein gufA K07238 TC.ZIP; zinc transporter, ZIP family
D THEMA_01040 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter
D THEMA_08905 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D THEMA_08910 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D THEMA_08915 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D THEMA_00550 ABC transporter permease K02824 uraA; uracil permease
D THEMA_01690 permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D THEMA_05100 chromate transporter K07240 chrA; chromate transporter
D THEMA_05105 chromate transporter K07240 chrA; chromate transporter
D THEMA_03115 C4-dicarboxylate ABC transporter K11688 dctP; TRAP-type transport system periplasmic protein
D THEMA_03105 C4-dicarboxylate ABC transporter K11690 dctM; TRAP-type transport system large permease protein
D THEMA_08470 bile acid:sodium symporter K03325 ACR3; arsenite transporter
D THEMA_08285 cation:proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D THEMA_08795 cation:proton antiporter K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D THEMA_08280 cation:proton antiporter K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D THEMA_08825 NADH-ubiquinone oxidoreductase chain 4L K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D THEMA_08820 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D THEMA_08305 cation:proton antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D THEMA_08300 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D THEMA_08810 hypothetical protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D THEMA_08295 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D THEMA_08805 hypothetical protein K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D THEMA_04375 multidrug transporter MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D THEMA_02605 transporter K24180 mleP; malate permease and related proteins
D THEMA_03580 transporter K24180 mleP; malate permease and related proteins
D THEMA_07040 membrane protein K23675 fmnP; riboflavin transporter
D THEMA_00690 transporter K09125 yhhQ; queuosine precursor transporter
D THEMA_01625 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D THEMA_03560 cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D THEMA_02640 Iron permease FTR1 family K07243 FTR; high-affinity iron transporter
D THEMA_03930 potassium transporter K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D THEMA_00235 glutaconyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D THEMA_04165 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D THEMA_01085 methylmalonyl-CoA carboxyltransferase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D THEMA_01075 propionyl-CoA carboxylase K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D THEMA_01080 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D THEMA_08640 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D THEMA_01445 lipopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D THEMA_04555 iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D THEMA_04550 iron transporter FeoB K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:tmi02044]
D THEMA_05760 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D THEMA_00455 type II secretory protein GspE K02652 pilB; type IV pilus assembly protein PilB
D THEMA_04335 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D THEMA_07530 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D THEMA_05575 hypothetical protein K02221 yggT; YggT family protein
D THEMA_02705 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D THEMA_00095 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D THEMA_00090 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D THEMA_05880 FlhB K04061 flhB2; flagellar biosynthesis protein
D THEMA_03620 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D THEMA_03630 flagellar export protein FliJ K02411 fliH; flagellar assembly protein FliH
D THEMA_03635 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D THEMA_01265 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D THEMA_01170 flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D THEMA_01175 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D THEMA_01180 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D THEMA_00085 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D THEMA_06390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D THEMA_00335 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D THEMA_02430 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D THEMA_00330 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D THEMA_02290 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D THEMA_06900 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D THEMA_06455 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D THEMA_01820 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D THEMA_00340 membrane protein K03210 yajC; preprotein translocase subunit YajC
D THEMA_07010 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:tmi02042]
D THEMA_00415 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:tmi02022]
D THEMA_05975 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D THEMA_00370 ATPase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D THEMA_04170 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D THEMA_08045 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D THEMA_08040 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D THEMA_01155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THEMA_01165 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THEMA_02685 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:tmi02035]
D THEMA_01155 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D THEMA_01070 chemotaxis protein W K03408 cheW; purine-binding chemotaxis protein CheW
D THEMA_01160 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D THEMA_06155 chemotaxis protein CheY K03409 cheX; chemotaxis protein CheX
D THEMA_00115 chemotaxis protein CheY K03410 cheC; chemotaxis protein CheC
D THEMA_00120 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D THEMA_02370 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D THEMA_02685 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D THEMA_01165 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D THEMA_00045 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_02580 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_04685 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_07175 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_08610 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_08630 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D THEMA_03630 flagellar export protein FliJ K02411 fliH; flagellar assembly protein FliH
D THEMA_03635 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D THEMA_02115 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D THEMA_01170 flagellar biosynthesis protein FliZ K02418 fliO; flagellar protein FliO/FliZ
D THEMA_01175 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D THEMA_01180 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D THEMA_00085 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D THEMA_00095 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D THEMA_00090 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D THEMA_03625 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D THEMA_01270 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D THEMA_01265 chemotaxis protein CheC K02417 fliN; flagellar motor switch protein FliN
D THEMA_03620 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D THEMA_06590 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D THEMA_06580 flagellar protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D THEMA_06585 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D THEMA_01275 flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D THEMA_07510 flagellar hook-basal body protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D THEMA_07520 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D THEMA_07515 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D THEMA_01300 flagellar hook capping protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D THEMA_06570 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D THEMA_06575 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D THEMA_01495 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ
D THEMA_01295 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D THEMA_04390 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D THEMA_04395 flagellar hook protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D THEMA_00860 flagellin K02406 fliC; flagellin
D THEMA_04145 flagellin K02406 fliC; flagellin
D THEMA_08730 flagellar hook protein FliD K02407 fliD; flagellar hook-associated protein 2
D THEMA_08440 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D THEMA_00125 RNA polymerase sigma70 K02405 fliA; RNA polymerase sigma factor FliA
D THEMA_01285 flagellar motor protein MotP K02556 motA; chemotaxis protein MotA
D THEMA_01280 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D THEMA_04400 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D THEMA_04380 anti-sigma-28 factor, FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D THEMA_08725 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D THEMA_01290 endoflagellar protein K02385 flbD; flagellar protein FlbD
D THEMA_00100 flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D THEMA_00105 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D THEMA_07530 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D THEMA_00455 type II secretory protein GspE K02652 pilB; type IV pilus assembly protein PilB
D THEMA_04335 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC
D THEMA_05760 peptidase A24 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tmi04812]
D THEMA_04370 hypothetical protein K06990 MEMO1; MEMO1 family protein
D THEMA_01725 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D THEMA_06565 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D THEMA_00460 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D THEMA_00465 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D THEMA_09125 minC; selenocysteine lyase K03610 minC; septum site-determining protein MinC
D THEMA_04820 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
C 04147 Exosome [BR:tmi04147]
D THEMA_00250 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D THEMA_01225 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D THEMA_01220 phosphate starvation-inducible protein PsiE K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D THEMA_03685 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D THEMA_00615 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D THEMA_02145 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D THEMA_02850 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D THEMA_07400 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D THEMA_07605 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D THEMA_06790 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D THEMA_04835 lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D THEMA_03940 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D THEMA_06905 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D THEMA_07405 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D THEMA_05295 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D THEMA_05300 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D THEMA_03195 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D THEMA_08380 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D THEMA_09585 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D THEMA_09630 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D THEMA_04025 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
D THEMA_03090 2-hydroxyacid dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D THEMA_08090 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D THEMA_02815 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D THEMA_06630 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D THEMA_09280 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D THEMA_08565 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
C 02048 Prokaryotic defense system [BR:tmi02048]
D THEMA_05205 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D THEMA_05210 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D THEMA_05195 CRISPR-associated protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D THEMA_05200 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D THEMA_05125 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D THEMA_05180 CRISPR-associated protein Csh1 K19114 csh1; CRISPR-associated protein Csh1
D THEMA_05185 CRISPR-associated protein Csh2 K19115 csh2; CRISPR-associated protein Csh2
D THEMA_05190 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D THEMA_05135 CRISPR-associated protein Csm1 K07016 csm1; CRISPR-associated protein Csm1
D THEMA_05140 CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2
D THEMA_05145 CRISPR-associated protein Csm3 K09002 csm3; CRISPR-associated protein Csm3
D THEMA_05150 CRISPR-associated protein Csm4 K19139 csm4; CRISPR-associated protein Csm4
D THEMA_05155 CRISPR-associated protein Csm5 K19140 csm5; CRISPR-associated protein Csm5
D THEMA_05215 CRISPR-associated protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1
D THEMA_05220 CRISPR-associated protein Crm2 K19076 cmr2; CRISPR-associated protein Cmr2
D THEMA_05225 CRISPR-associated protein Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D THEMA_05230 CRISPR-associated protein Cmr4 K09000 cmr4; CRISPR-associated protein Cmr4
D THEMA_05235 CRISPR-associated protein Cmr5 K19141 cmr5; CRISPR-associated protein Cmr5
D THEMA_05240 CRISPR-associated protein Cmr6 K19142 cmr6; CRISPR-associated protein Cmr6
D THEMA_03080 SAM-dependent methyltransferase K24451 zim; modification methylase
D THEMA_00460 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D THEMA_01725 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D THEMA_06565 rod shape-determining protein Mbl K03569 mreB; rod shape-determining protein MreB and related proteins
D THEMA_04795 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D THEMA_05780 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tmi01504]
D THEMA_06595 hypothetical protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tmi00537]
D THEMA_04025 alkaline phosphatase K01077 ALP; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tmi03100]
D THEMA_03830 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THEMA_03895 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THEMA_06320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D THEMA_03760 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_03790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_03800 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_06315 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_06560 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D THEMA_08390 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D THEMA_05425 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D THEMA_07460 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D THEMA_00895 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THEMA_02735 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D THEMA_05260 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THEMA_05890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D THEMA_02275 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THEMA_03785 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THEMA_07625 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D THEMA_03795 tRNA-His K14226 tRNA-His; tRNA His
D THEMA_03900 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D THEMA_00380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_00560 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_02270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_07370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_07500 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D THEMA_02265 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THEMA_06310 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D THEMA_02460 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_02470 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_07630 tRNA-Met K14230 tRNA-Met; tRNA Met
D THEMA_06330 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D THEMA_04085 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THEMA_05885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THEMA_08125 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D THEMA_00540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_02310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_03765 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_05310 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D THEMA_01775 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THEMA_02455 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THEMA_03085 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D THEMA_02435 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D THEMA_02450 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D THEMA_06335 tRNA-Val K14237 tRNA-Val; tRNA Val
D THEMA_07240 tRNA-Val K14237 tRNA-Val; tRNA Val
D THEMA_07375 tRNA-Val K14237 tRNA-Val; tRNA Val
D THEMA_03905 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D THEMA_03890 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D THEMA_03885 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D THEMA_01015 bacterial RNase P K01978 rnpB; RNase P catalytic RNA component
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D THEMA_09310 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D THEMA_06625 FAD dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D THEMA_00750 alkyl hydroperoxide reductase K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D THEMA_02790 nitroreductase K24130 K24130; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D THEMA_04745 NADP oxidoreductase K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D THEMA_03725 ferredoxin K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D THEMA_07185 iron hydrogenase K17997 hydA; iron-hydrogenase subunit alpha [EC:1.12.1.4]
D THEMA_07190 NADH dehydrogenase K17998 hydB; iron-hydrogenase subunit beta [EC:1.12.1.4]
D THEMA_07195 NADH dehydrogenase K17999 hydC; iron-hydrogenase subunit gamma [EC:1.12.1.4]
D THEMA_01375 Neelaredoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D THEMA_08705 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D THEMA_06050 ferredoxin-NADP(+) reductase subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D THEMA_02800 ribonucleoside-triphosphate reductase K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D THEMA_06520 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THEMA_08150 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THEMA_00015 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THEMA_04260 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D THEMA_01145 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D THEMA_01805 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D THEMA_08185 glycosyltransferase K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D THEMA_08205 glycosylase K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D THEMA_04910 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D THEMA_02920 glycosyltransferase family 1 K23395 E2.4.1.361; GDP-mannose:di-myo-inositol-1,3'-phosphate beta-1,2-mannosyltransferase [EC:2.4.1.361]
D THEMA_09520 phosphoribosylaminoimidazole carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D THEMA_04010 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D THEMA_06515 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D THEMA_05365 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D THEMA_03730 DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D THEMA_09250 esterase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D THEMA_03040 dipeptidyl aminopeptidase K24085 estD; esterase [EC:3.1.1.1]
D THEMA_01880 phosphotransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D THEMA_03920 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D THEMA_06760 phosphodiesterase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D THEMA_01330 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D THEMA_08325 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D THEMA_04530 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D THEMA_03185 alpha-glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D THEMA_05090 DNA lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D THEMA_05940 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D THEMA_03650 dfrA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D THEMA_08685 magnesium chelatase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D THEMA_01365 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D THEMA_00025 NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D THEMA_08980 ExsB family protein K06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]
D THEMA_09515 arginosuccinate synthase K06864 larE; cysteine-dependent pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase [EC:4.4.1.37 4.4.1.45]
D THEMA_09525 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D THEMA_03500 NADH:ubiquinone oxidoreductase K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D THEMA_03505 electron transporter RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D THEMA_03480 Fe-S cluster domain-containing protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
C 99981 Carbohydrate metabolism
D THEMA_01845 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D THEMA_00175 hypothetical protein K04767 acuB; acetoin utilization protein AcuB
D THEMA_08645 hypothetical protein K04767 acuB; acetoin utilization protein AcuB
D THEMA_04425 beta-xylosidase K17641 bxlA; beta-xylosidase
C 99982 Energy metabolism
D THEMA_09715 ferredoxin K05337 fer; ferredoxin
D THEMA_03495 electron transporter subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D THEMA_03490 electron transporter RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D THEMA_03485 electron transport complex RsxE subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D THEMA_07475 nitrogen fixation protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D THEMA_06635 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D THEMA_06620 4Fe-4S ferredoxin K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
D THEMA_06960 carbohydrate-binding protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D THEMA_05580 alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D THEMA_02340 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D THEMA_07365 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D THEMA_04800 cold-shock protein K03704 cspA; cold shock protein
D THEMA_05825 cold-shock protein K03704 cspA; cold shock protein
D THEMA_02710 nitrogen regulatory protein P-II 1 K04752 glnK; nitrogen regulatory protein P-II 2
D THEMA_02870 transcriptional regulator K07745 K07745; transcriptional regulator
D THEMA_05790 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
D THEMA_05815 RNA-binding protein K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D THEMA_01195 tig; trigger factor K03545 tig; trigger factor
D THEMA_03455 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D THEMA_02110 magnesium chelatase K07391 comM; magnesium chelatase family protein
D THEMA_00040 osmotically inducible protein C K07397 yhfA; putative redox protein
C 99976 Replication and repair
D THEMA_09415 hypothetical protein K07445 K07445; putative DNA methylase
D THEMA_07855 ribonuclease H K06993 K06993; ribonuclease H-related protein
D THEMA_06495 hypothetical protein K03630 radC; DNA repair protein RadC
D THEMA_02810 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D THEMA_03460 hypothetical protein K07460 yraN; putative endonuclease
D THEMA_03475 DNA polymerase III K04096 smf; DNA processing protein
D THEMA_02135 hypothetical protein K07478 ycaJ; putative ATPase
D THEMA_00765 transposase IS200 K07491 rayT; REP-associated tyrosine transposase
D THEMA_04565 transposase IS200 K07491 rayT; REP-associated tyrosine transposase
D THEMA_05040 transposase IS200 K07491 rayT; REP-associated tyrosine transposase
D THEMA_00770 transposase K07496 K07496; putative transposase
D THEMA_04130 transposase K07496 K07496; putative transposase
D THEMA_04570 transposase K07496 K07496; putative transposase
D THEMA_05045 transposase K07496 K07496; putative transposase
D THEMA_05855 transposase K07496 K07496; putative transposase
D THEMA_09140 transposase IS605 K07496 K07496; putative transposase
D THEMA_09230 transposase K07496 K07496; putative transposase
D THEMA_09340 transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D THEMA_01230 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D THEMA_02855 cation transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D THEMA_00050 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D THEMA_03420 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D THEMA_08800 sodium:proton antiporter K07242 K07242; putative multicomponent Na+:H+ antiporter subunit B
C 99978 Cell growth
D THEMA_07015 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
D THEMA_00150 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D THEMA_03805 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D THEMA_09065 stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
C 99995 Signaling proteins
D THEMA_06765 DEAD/DEAH box helicase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D THEMA_02195 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D THEMA_09095 outer membrane chaperone Skp K06142 hlpA; outer membrane protein
C 99994 Others
D THEMA_05565 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
D THEMA_08035 PhoU family transcriptional regulator K02039 phoU; phosphate transport system protein
D THEMA_09080 divalent ion tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D THEMA_01105 Patatin K07001 K07001; NTE family protein
D THEMA_01460 haloacid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D THEMA_07490 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D THEMA_09540 LemA family protein K03744 lemA; LemA protein
D THEMA_03980 hypothetical protein K08974 K08974; putative membrane protein
D THEMA_06605 hypothetical protein K08980 K08980; putative membrane protein
D THEMA_03150 membrane protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D THEMA_07720 radical SAM protein K06871 K06871; uncharacterized protein
D THEMA_07725 radical SAM protein K06871 K06871; uncharacterized protein
D THEMA_07760 radical SAM protein K06871 K06871; uncharacterized protein
D THEMA_07835 radical SAM protein K06871 K06871; uncharacterized protein
D THEMA_09535 methanol dehydrogenase K06872 K06872; uncharacterized protein
D THEMA_06545 metal-dependent phosphohydrolase K06885 K06885; uncharacterized protein
D THEMA_09300 ATPase AAA K06921 K06921; uncharacterized protein
D THEMA_09410 hypothetical protein K06922 K06922; uncharacterized protein
D THEMA_07140 CoA-binding protein K06929 K06929; uncharacterized protein
D THEMA_06445 hypothetical protein K06960 K06960; uncharacterized protein
D THEMA_06745 zinc metallopeptidase K06973 K06973; uncharacterized protein
D THEMA_08785 cupin K06995 K06995; uncharacterized protein
D THEMA_00565 RND transporter K07003 K07003; uncharacterized protein
D THEMA_07865 RND transporter K07003 K07003; uncharacterized protein
D THEMA_07235 hypothetical protein K07033 K07033; uncharacterized protein
D THEMA_01425 DNA polymerase subunit beta K07075 K07075; uncharacterized protein
D THEMA_08420 aldo/keto reductase K07079 K07079; uncharacterized protein
D THEMA_09365 hypothetical protein K07089 K07089; uncharacterized protein
D THEMA_02835 integrase K07090 K07090; uncharacterized protein
D THEMA_03575 metallophosphatase K07095 K07095; uncharacterized protein
D THEMA_08840 phosphodiesterase K07095 K07095; uncharacterized protein
D THEMA_08975 metallophosphatase K07095 K07095; uncharacterized protein
D THEMA_06240 transcriptional regulator K07105 K07105; uncharacterized protein
D THEMA_09440 transporter K07112 K07112; uncharacterized protein
D THEMA_01585 ATPase AAA K07133 K07133; uncharacterized protein
D THEMA_08010 ATPase AAA K07133 K07133; uncharacterized protein
D THEMA_01665 FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D THEMA_04630 4Fe-4S ferredoxin K07138 K07138; uncharacterized protein
D THEMA_02100 radical SAM protein K07139 K07139; uncharacterized protein
D THEMA_03595 membrane protein K07150 K07150; uncharacterized protein
D THEMA_07005 membrane protein K08998 K08998; uncharacterized protein
D THEMA_04000 hypothetical protein K08999 K08999; uncharacterized protein
D THEMA_05905 hypothetical protein K09005 K09005; uncharacterized protein
D THEMA_08965 hypothetical protein K09009 K09009; uncharacterized protein
D THEMA_09285 hypothetical protein K09010 K09010; uncharacterized protein
D THEMA_01215 aspartyl-tRNA amidotransferase subunit B K09117 K09117; uncharacterized protein
D THEMA_00755 hypothetical protein K09122 K09122; uncharacterized protein
D THEMA_00210 hypothetical protein K09126 K09126; uncharacterized protein
D THEMA_03750 adenosine monophosphate-protein transferase K09129 K09129; uncharacterized protein
D THEMA_09355 hypothetical protein K09132 K09132; uncharacterized protein
D THEMA_02280 hypothetical protein K09133 K09133; uncharacterized protein
D THEMA_04695 hypothetical protein K09137 K09137; uncharacterized protein
D THEMA_06525 hypothetical protein K09141 K09141; uncharacterized protein
D THEMA_07505 hypothetical protein K09143 K09143; uncharacterized protein
D THEMA_09330 hypothetical protein K09155 K09155; uncharacterized protein
D THEMA_00720 hypothetical protein K09700 K09700; uncharacterized protein
D THEMA_00980 hypothetical protein K09749 K09749; uncharacterized protein
D THEMA_06000 hypothetical protein K09764 K09764; uncharacterized protein
D THEMA_01825 hypothetical protein K09766 K09766; uncharacterized protein
D THEMA_06015 hypothetical protein K09770 K09770; uncharacterized protein
D THEMA_08140 acid phosphatase K09775 K09775; uncharacterized protein
D THEMA_06370 hypothetical protein K09776 K09776; uncharacterized protein
D THEMA_05540 nuclease K09785 K09785; uncharacterized protein
D THEMA_09420 hypothetical protein K09934 K09934; uncharacterized protein
D THEMA_07120 hypothetical protein K09942 K09942; uncharacterized protein
D THEMA_03325 hypothetical protein K09955 K09955; uncharacterized protein
D THEMA_00065 hypothetical protein K07220 K07220; uncharacterized protein
D THEMA_03425 phosphate transport regulator K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2026